Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58949.t1 | XP_003609578.2 | 97.6 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 5.30E-155 | 557 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58949.t1 | B9DHD7 | 34.5 | 385 | 158 | 7 | 1 | 292 | 1 | 384 | 3.8e-45 | 183.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58949.t1 | G7JJ25 | 97.6 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 3.8e-155 | 557.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054941 | MS.gene58949 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene58949 | 0.806776 | 6.98E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene58949 | 0.801838 | 7.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58949.t1 | MTR_4g118760 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 585 |
| MS.gene58949.t1 | MTR_4g118760 | 93.791 | 306 | 7 | 1 | 1 | 294 | 1 | 306 | 0.0 | 575 |
| MS.gene58949.t1 | MTR_4g027050 | 39.863 | 291 | 119 | 7 | 2 | 292 | 3 | 237 | 2.37e-60 | 192 |
| MS.gene58949.t1 | MTR_1g081950 | 61.151 | 139 | 54 | 0 | 3 | 141 | 4 | 142 | 5.14e-55 | 184 |
| MS.gene58949.t1 | MTR_1g081950 | 35.714 | 154 | 79 | 4 | 148 | 293 | 293 | 434 | 6.26e-17 | 80.9 |
| MS.gene58949.t1 | MTR_5g012420 | 36.644 | 292 | 128 | 6 | 2 | 292 | 5 | 240 | 7.77e-53 | 173 |
| MS.gene58949.t1 | MTR_4g026830 | 60.317 | 126 | 50 | 0 | 6 | 131 | 25 | 150 | 7.70e-48 | 159 |
| MS.gene58949.t1 | MTR_4g026620 | 60.976 | 123 | 48 | 0 | 6 | 128 | 19 | 141 | 1.09e-45 | 153 |
| MS.gene58949.t1 | MTR_4g101020 | 60.000 | 120 | 48 | 0 | 4 | 123 | 6 | 125 | 1.19e-45 | 154 |
| MS.gene58949.t1 | MTR_4g026650 | 58.678 | 121 | 50 | 0 | 6 | 126 | 25 | 145 | 6.42e-44 | 148 |
| MS.gene58949.t1 | MTR_5g013320 | 55.814 | 129 | 56 | 1 | 3 | 131 | 4 | 131 | 2.20e-43 | 148 |
| MS.gene58949.t1 | MTR_0135s0080 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 2.14e-41 | 141 |
| MS.gene58949.t1 | MTR_4g026780 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 2.66e-41 | 141 |
| MS.gene58949.t1 | MTR_4g026780 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 3.92e-41 | 141 |
| MS.gene58949.t1 | MTR_4g026780 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 4.41e-41 | 141 |
| MS.gene58949.t1 | MTR_4g026780 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 2.66e-40 | 140 |
| MS.gene58949.t1 | MTR_4g026780 | 57.851 | 121 | 51 | 0 | 6 | 126 | 24 | 144 | 2.72e-40 | 140 |
| MS.gene58949.t1 | MTR_4g026540 | 47.664 | 107 | 55 | 1 | 17 | 122 | 26 | 132 | 6.81e-25 | 99.0 |
| MS.gene58949.t1 | MTR_1g081950 | 62.500 | 72 | 27 | 0 | 70 | 141 | 1 | 72 | 5.46e-22 | 94.7 |
| MS.gene58949.t1 | MTR_1g081950 | 35.714 | 154 | 79 | 4 | 148 | 293 | 223 | 364 | 1.05e-16 | 79.7 |
| MS.gene58949.t1 | MTR_5g012420 | 29.018 | 224 | 102 | 6 | 70 | 292 | 1 | 168 | 1.44e-17 | 79.0 |
| MS.gene58949.t1 | MTR_0753s0030 | 50.000 | 78 | 36 | 2 | 18 | 92 | 1 | 78 | 3.09e-17 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58949.t1 | AT1G08820 | 53.757 | 173 | 79 | 1 | 1 | 173 | 1 | 172 | 2.01e-56 | 186 |
| MS.gene58949.t1 | AT1G08820 | 36.471 | 85 | 53 | 1 | 209 | 292 | 300 | 384 | 6.05e-12 | 65.9 |
| MS.gene58949.t1 | AT1G08820 | 53.757 | 173 | 79 | 1 | 1 | 173 | 1 | 172 | 2.01e-56 | 186 |
| MS.gene58949.t1 | AT1G08820 | 36.471 | 85 | 53 | 1 | 209 | 292 | 300 | 384 | 6.05e-12 | 65.9 |
| MS.gene58949.t1 | AT1G08820 | 53.757 | 173 | 79 | 1 | 1 | 173 | 1 | 172 | 2.01e-56 | 186 |
| MS.gene58949.t1 | AT1G08820 | 36.471 | 85 | 53 | 1 | 209 | 292 | 300 | 384 | 6.05e-12 | 65.9 |
| MS.gene58949.t1 | AT1G08820 | 53.757 | 173 | 79 | 1 | 1 | 173 | 1 | 172 | 2.01e-56 | 186 |
| MS.gene58949.t1 | AT1G08820 | 36.471 | 85 | 53 | 1 | 209 | 292 | 300 | 384 | 6.05e-12 | 65.9 |
| MS.gene58949.t1 | AT1G08820 | 53.757 | 173 | 79 | 1 | 1 | 173 | 1 | 172 | 2.01e-56 | 186 |
| MS.gene58949.t1 | AT1G08820 | 36.471 | 85 | 53 | 1 | 209 | 292 | 300 | 384 | 6.05e-12 | 65.9 |
| MS.gene58949.t1 | AT2G45140 | 36.691 | 278 | 118 | 4 | 1 | 277 | 1 | 221 | 3.29e-53 | 174 |
| MS.gene58949.t1 | AT2G45140 | 56.489 | 131 | 57 | 0 | 1 | 131 | 1 | 131 | 7.14e-49 | 162 |
| MS.gene58949.t1 | AT4G00170 | 35.836 | 293 | 129 | 6 | 2 | 293 | 3 | 237 | 8.32e-47 | 157 |
| MS.gene58949.t1 | AT5G47180 | 57.480 | 127 | 54 | 0 | 4 | 130 | 8 | 134 | 2.88e-46 | 155 |
| MS.gene58949.t1 | AT5G47180 | 57.480 | 127 | 54 | 0 | 4 | 130 | 8 | 134 | 2.88e-46 | 155 |
| MS.gene58949.t1 | AT3G60600 | 53.488 | 129 | 60 | 0 | 3 | 131 | 20 | 148 | 2.80e-45 | 154 |
| MS.gene58949.t1 | AT3G60600 | 53.488 | 129 | 60 | 0 | 3 | 131 | 20 | 148 | 9.33e-45 | 151 |
| MS.gene58949.t1 | AT3G60600 | 53.488 | 129 | 60 | 0 | 3 | 131 | 20 | 148 | 9.69e-45 | 152 |
| MS.gene58949.t1 | AT1G51270 | 50.000 | 130 | 65 | 0 | 2 | 131 | 3 | 132 | 3.26e-38 | 138 |
| MS.gene58949.t1 | AT2G23830 | 48.837 | 129 | 66 | 0 | 4 | 132 | 5 | 133 | 1.42e-37 | 130 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 1 | 131 | 1.44e-37 | 137 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 1 | 131 | 1.44e-37 | 137 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 1 | 131 | 1.44e-37 | 137 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 1 | 131 | 1.44e-37 | 137 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 172 | 302 | 3.02e-36 | 136 |
| MS.gene58949.t1 | AT1G51270 | 47.368 | 133 | 68 | 1 | 2 | 132 | 3 | 135 | 1.20e-35 | 134 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 172 | 302 | 3.02e-36 | 136 |
| MS.gene58949.t1 | AT1G51270 | 47.368 | 133 | 68 | 1 | 2 | 132 | 3 | 135 | 1.20e-35 | 134 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 1 | 131 | 3.42e-36 | 135 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 172 | 302 | 8.03e-36 | 135 |
| MS.gene58949.t1 | AT1G51270 | 47.368 | 133 | 68 | 1 | 2 | 132 | 3 | 135 | 2.87e-35 | 134 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 124 | 254 | 1.21e-35 | 135 |
| MS.gene58949.t1 | AT1G51270 | 44.186 | 86 | 46 | 1 | 49 | 132 | 2 | 87 | 3.86e-18 | 84.7 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 124 | 254 | 1.21e-35 | 135 |
| MS.gene58949.t1 | AT1G51270 | 44.186 | 86 | 46 | 1 | 49 | 132 | 2 | 87 | 3.86e-18 | 84.7 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 124 | 254 | 1.21e-35 | 135 |
| MS.gene58949.t1 | AT1G51270 | 44.186 | 86 | 46 | 1 | 49 | 132 | 2 | 87 | 3.86e-18 | 84.7 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 124 | 254 | 1.21e-35 | 135 |
| MS.gene58949.t1 | AT1G51270 | 44.186 | 86 | 46 | 1 | 49 | 132 | 2 | 87 | 3.86e-18 | 84.7 |
| MS.gene58949.t1 | AT1G51270 | 48.855 | 131 | 67 | 0 | 1 | 131 | 172 | 302 | 1.56e-35 | 135 |
| MS.gene58949.t1 | AT1G51270 | 47.368 | 133 | 68 | 1 | 2 | 132 | 3 | 135 | 5.70e-35 | 133 |
| MS.gene58949.t1 | AT4G00170 | 33.209 | 268 | 120 | 6 | 27 | 293 | 1 | 210 | 4.73e-35 | 126 |
| MS.gene58949.t1 | AT1G51270 | 48.387 | 62 | 32 | 0 | 70 | 131 | 1 | 62 | 7.39e-11 | 62.8 |
Find 63 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGATTCAGAGGAAGTTAA+AGG | 0.258453 | 8.3:-7902174 | MS.gene58949:CDS |
| TTACAGTTTGCAAAAGATAC+TGG | 0.271340 | 8.3:-7902655 | MS.gene58949:intron |
| TTGTCTTTGCAATGCATATC+AGG | 0.307833 | 8.3:+7903157 | None:intergenic |
| CCATTTACTGGTAGCAAAAC+TGG | 0.317113 | 8.3:+7902577 | None:intergenic |
| TCCATTACTGTTTGTCTGCA+TGG | 0.349587 | 8.3:-7900305 | MS.gene58949:CDS |
| TGTTTGATATCACCATTTAC+TGG | 0.351430 | 8.3:+7902565 | None:intergenic |
| AAATTAATGTGCTAAAAGAT+AGG | 0.352433 | 8.3:-7902528 | MS.gene58949:CDS |
| GGAGAGGAGCTCACTCTTAG+AGG | 0.359776 | 8.3:+7902475 | None:intergenic |
| AGGTCGAACACAATATTTCT+TGG | 0.360018 | 8.3:+7903390 | None:intergenic |
| GTGAAATCACATTTATCCTT+TGG | 0.360402 | 8.3:+7903349 | None:intergenic |
| TTCAGAGGAAGTTAAAGGTT+TGG | 0.365327 | 8.3:-7902169 | MS.gene58949:CDS |
| TCCTCTCTTGTATCCAAGGC+TGG | 0.378052 | 8.3:+7902144 | None:intergenic |
| ATAAGCACCGTTGTCCCCTT+TGG | 0.382884 | 8.3:-7903124 | MS.gene58949:CDS |
| GTCTGCATGGTTGCTCTTGT+CGG | 0.387243 | 8.3:-7900292 | MS.gene58949:CDS |
| TATTGTGTTCGACCTAATAT+AGG | 0.401291 | 8.3:-7903382 | MS.gene58949:CDS |
| AGATGACATTACATCTGATA+TGG | 0.408022 | 8.3:-7903092 | MS.gene58949:intron |
| GAAAAGTAATGCAAAAGTTC+AGG | 0.410706 | 8.3:-7900335 | MS.gene58949:CDS |
| CTTCAATTCCTCACAACTCT+TGG | 0.417069 | 8.3:+7902035 | None:intergenic |
| TAAAGGTTTGGAACCAGCCT+TGG | 0.421952 | 8.3:-7902157 | MS.gene58949:CDS |
| GAAGTCAAGGCTTTGTATGA+TGG | 0.445222 | 8.3:-7902016 | MS.gene58949:CDS |
| GGCTTGATGATGCCTATATT+AGG | 0.447340 | 8.3:+7903370 | None:intergenic |
| GGTCGAACACAATATTTCTT+GGG | 0.448494 | 8.3:+7903391 | None:intergenic |
| TTTATCCTCTCTTGTATCCA+AGG | 0.454205 | 8.3:+7902140 | None:intergenic |
| ATCTCTAACCTCTCTTAGCT+TGG | 0.463266 | 8.3:+7901990 | None:intergenic |
| AGTAAATGGTGATATCAAAC+AGG | 0.468338 | 8.3:-7902563 | MS.gene58949:CDS |
| GCTCTTGTCGGCGTGGCAGT+CGG | 0.490209 | 8.3:-7900280 | MS.gene58949:CDS |
| CTTACAGACAAATCTGAGTT+CGG | 0.491960 | 8.3:+7903769 | None:intergenic |
| TCATCTTCTGTAGTTCCAAA+GGG | 0.493737 | 8.3:+7903109 | None:intergenic |
| AGCACATTAATTTGGTTGGA+CGG | 0.510313 | 8.3:+7902538 | None:intergenic |
| GTCATCTTCTGTAGTTCCAA+AGG | 0.515644 | 8.3:+7903108 | None:intergenic |
| GGATACTATATTCATCCATA+AGG | 0.520165 | 8.3:-7900259 | None:intergenic |
| AATTAATGTGCTAAAAGATA+GGG | 0.524135 | 8.3:-7902527 | MS.gene58949:CDS |
| AAGGATAAATGTGATTTCAC+TGG | 0.527822 | 8.3:-7903346 | MS.gene58949:intron |
| GTGAAGATGGTGGGCTGATG+AGG | 0.531111 | 8.3:+7902599 | None:intergenic |
| GAGAGGAGCTCACTCTTAGA+GGG | 0.532428 | 8.3:+7902476 | None:intergenic |
| AGATTTGCTGAAGCAAGAGT+TGG | 0.540064 | 8.3:-7901372 | MS.gene58949:intron |
| TTTGTTAGGAGGCGTTAAAG+AGG | 0.554821 | 8.3:-7900357 | MS.gene58949:intron |
| CCCAAGGCATGCTGAAAATG+TGG | 0.569336 | 8.3:-7902100 | MS.gene58949:CDS |
| GGTAGCAAAACTGGTGAAGA+TGG | 0.580944 | 8.3:+7902586 | None:intergenic |
| CAGACAAATCTGAGTTCGGA+AGG | 0.595454 | 8.3:+7903773 | None:intergenic |
| AGTAATGCAAAAGTTCAGGC+TGG | 0.602697 | 8.3:-7900331 | MS.gene58949:CDS |
| ACCATGCAGACAAACAGTAA+TGG | 0.604527 | 8.3:+7900304 | None:intergenic |
| CATGGTTGCTCTTGTCGGCG+TGG | 0.607587 | 8.3:-7900287 | MS.gene58949:CDS |
| TATAGGCATCATCAAGCCAA+AGG | 0.613145 | 8.3:-7903365 | MS.gene58949:CDS |
| GAATTTAGCCAAGAGTTGTG+AGG | 0.620694 | 8.3:-7902043 | MS.gene58949:CDS |
| CAGATGAGGCTTCTGTCCCA+AGG | 0.620752 | 8.3:-7902116 | MS.gene58949:CDS |
| GTTGTGAGGAATTGAAGTCA+AGG | 0.623880 | 8.3:-7902029 | MS.gene58949:CDS |
| AGCAAAACTGGTGAAGATGG+TGG | 0.633618 | 8.3:+7902589 | None:intergenic |
| TACGATGCAAGCTCAACGCA+CGG | 0.643792 | 8.3:-7903185 | MS.gene58949:CDS |
| GCAAAACTGGTGAAGATGGT+GGG | 0.644493 | 8.3:+7902590 | None:intergenic |
| ACCAGCCTTGGATACAAGAG+AGG | 0.647997 | 8.3:-7902145 | MS.gene58949:CDS |
| TGCTGTGATGAAGTTGAATG+AGG | 0.648915 | 8.3:-7901420 | MS.gene58949:CDS |
| AAGAGAGGATAAAACAGATG+AGG | 0.650333 | 8.3:-7902130 | MS.gene58949:CDS |
| TGTAGTTCCAAAGGGGACAA+CGG | 0.653826 | 8.3:+7903117 | None:intergenic |
| CGTCGAGGAGAAGAAACTGA+AGG | 0.660811 | 8.3:-7902626 | MS.gene58949:CDS |
| TCTTTGCAATGCATATCAGG+CGG | 0.662471 | 8.3:+7903160 | None:intergenic |
| GATGGATTCCAAGCTAAGAG+AGG | 0.667824 | 8.3:-7901998 | MS.gene58949:intron |
| CCAAGGCATGCTGAAAATGT+GGG | 0.678690 | 8.3:-7902099 | MS.gene58949:CDS |
| CTAAAAGATAGGGTGTCCAG+TGG | 0.678836 | 8.3:-7902517 | MS.gene58949:CDS |
| AGAGGAGCTCACTCTTAGAG+GGG | 0.681999 | 8.3:+7902477 | None:intergenic |
| GAGGAGCTCACTCTTAGAGG+GGG | 0.684348 | 8.3:+7902478 | None:intergenic |
| CATCTTCTGTAGTTCCAAAG+GGG | 0.716685 | 8.3:+7903110 | None:intergenic |
| AGATACTGGAAAGTACGTCG+AGG | 0.733923 | 8.3:-7902641 | MS.gene58949:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATATACAGTAAA+AGG | + | chr8.3:7900519-7900538 | None:intergenic | 10.0% |
| !! | TATATTTATCTTATTGTTTA+AGG | - | chr8.3:7900742-7900761 | MS.gene58949:intron | 10.0% |
| !!! | ATTAATTTTTTTAACTTGAA+AGG | + | chr8.3:7901610-7901629 | None:intergenic | 10.0% |
| !!! | AAAACAGATTTTAATTGTTT+CGG | - | chr8.3:7901162-7901181 | MS.gene58949:intron | 15.0% |
| !! | AAAAACAGAATGAAAATAGT+TGG | + | chr8.3:7901359-7901378 | None:intergenic | 20.0% |
| !! | AAAAATCTCAAATTCATATC+TGG | + | chr8.3:7901769-7901788 | None:intergenic | 20.0% |
| !! | AAATTAATGTGCTAAAAGAT+AGG | - | chr8.3:7901533-7901552 | MS.gene58949:intron | 20.0% |
| !! | AATTAATGTGCTAAAAGATA+GGG | - | chr8.3:7901534-7901553 | MS.gene58949:intron | 20.0% |
| !! | AGAATTATGTTAAAGTATGA+CGG | + | chr8.3:7902146-7902165 | None:intergenic | 20.0% |
| !! | ATATTATCTCAGATTATGTA+TGG | - | chr8.3:7902511-7902530 | MS.gene58949:CDS | 20.0% |
| !! | ATTCAAGTAACACAAATTAT+TGG | - | chr8.3:7900821-7900840 | MS.gene58949:intron | 20.0% |
| !! | ATTTATTATCTATCATCCAA+TGG | + | chr8.3:7901833-7901852 | None:intergenic | 20.0% |
| !! | TACTAATATATGGACAAATA+TGG | - | chr8.3:7902290-7902309 | MS.gene58949:intron | 20.0% |
| !! | TATAGTCTAAAAAAAGATGT+TGG | + | chr8.3:7903434-7903453 | None:intergenic | 20.0% |
| !! | TCCATATATTAGTATAATGT+GGG | + | chr8.3:7902284-7902303 | None:intergenic | 20.0% |
| !! | TGAAAAAACTAACAATCAAA+TGG | + | chr8.3:7903391-7903410 | None:intergenic | 20.0% |
| !!! | AAGTTTTCTTTTGTTTTGTT+AGG | - | chr8.3:7903690-7903709 | MS.gene58949:intron | 20.0% |
| !!! | AGATAGCTTTAAATTACATT+GGG | + | chr8.3:7902248-7902267 | None:intergenic | 20.0% |
| !!! | TAGATAGCTTTAAATTACAT+TGG | + | chr8.3:7902249-7902268 | None:intergenic | 20.0% |
| !!! | TATCTTTTAGCACATTAATT+TGG | + | chr8.3:7901534-7901553 | None:intergenic | 20.0% |
| !!! | TTTCTTAATTTACTTTTACC+AGG | - | chr8.3:7901868-7901887 | MS.gene58949:intron | 20.0% |
| ! | AAGAAAATGCTAAGAAAAGA+AGG | + | chr8.3:7900324-7900343 | None:intergenic | 25.0% |
| ! | ACATAATTCTCTCAAAATGT+TGG | - | chr8.3:7902156-7902175 | MS.gene58949:CDS | 25.0% |
| ! | ATCATGATTGATCTAAATTC+AGG | + | chr8.3:7902097-7902116 | None:intergenic | 25.0% |
| ! | CCATATATTAGTATAATGTG+GGG | + | chr8.3:7902283-7902302 | None:intergenic | 25.0% |
| ! | GACTATACTAACTTCAATTT+AGG | - | chr8.3:7903447-7903466 | MS.gene58949:intron | 25.0% |
| ! | GATAATTGAGTAAATAGTTG+TGG | + | chr8.3:7900490-7900509 | None:intergenic | 25.0% |
| ! | GTCCATATATTAGTATAATG+TGG | + | chr8.3:7902285-7902304 | None:intergenic | 25.0% |
| ! | TATATCTTAATAAACCACAC+TGG | + | chr8.3:7902494-7902513 | None:intergenic | 25.0% |
| ! | TCTTTGCACTTTACAAAAAA+TGG | + | chr8.3:7902577-7902596 | None:intergenic | 25.0% |
| ! | TTATGAACAATGTGATAAGT+TGG | - | chr8.3:7901249-7901268 | MS.gene58949:intron | 25.0% |
| !! | AAATTTTGTAATCTACTTGC+AGG | - | chr8.3:7900633-7900652 | MS.gene58949:intron | 25.0% |
| !! | ATTAGAAGTTTTCTGATCAA+CGG | - | chr8.3:7903517-7903536 | MS.gene58949:intron | 25.0% |
| !! | TTAAAGATATAGGCATTGTT+TGG | - | chr8.3:7901058-7901077 | MS.gene58949:intron | 25.0% |
| !!! | CAACCTTTTAAGACAATTTA+TGG | + | chr8.3:7902453-7902472 | None:intergenic | 25.0% |
| !!! | GCATTTTTTCGCAATATTAA+GGG | - | chr8.3:7902913-7902932 | MS.gene58949:intron | 25.0% |
| !!! | TGCATTTTTTCGCAATATTA+AGG | - | chr8.3:7902912-7902931 | MS.gene58949:intron | 25.0% |
| !!! | TTTTAGCACATTAATTTGGT+TGG | + | chr8.3:7901530-7901549 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTGTTTTGTTAGG+AGG | - | chr8.3:7903693-7903712 | MS.gene58949:intron | 25.0% |
| !!! | TTTTTTTAACTTGAAAGGAG+AGG | + | chr8.3:7901605-7901624 | None:intergenic | 25.0% |
| AAAAATGCAGACAAATCATG+TGG | + | chr8.3:7902901-7902920 | None:intergenic | 30.0% | |
| AAAGCCTTAAATTGCATTTG+CGG | + | chr8.3:7902950-7902969 | None:intergenic | 30.0% | |
| AAGGATAAATGTGATTTCAC+TGG | - | chr8.3:7900715-7900734 | MS.gene58949:intron | 30.0% | |
| AATACAAAACCCTCATCATT+TGG | + | chr8.3:7903214-7903233 | None:intergenic | 30.0% | |
| AATCTCAAATTCATATCTGG+TGG | + | chr8.3:7901766-7901785 | None:intergenic | 30.0% | |
| AGATGACATTACATCTGATA+TGG | - | chr8.3:7900969-7900988 | MS.gene58949:intron | 30.0% | |
| AGTAAATGGTGATATCAAAC+AGG | - | chr8.3:7901498-7901517 | MS.gene58949:intron | 30.0% | |
| ATAACCGCAAATGCAATTTA+AGG | - | chr8.3:7902943-7902962 | MS.gene58949:intron | 30.0% | |
| ATACAAAACCCTCATCATTT+GGG | + | chr8.3:7903213-7903232 | None:intergenic | 30.0% | |
| ATATATGGACAAATATGGCT+AGG | - | chr8.3:7902295-7902314 | MS.gene58949:intron | 30.0% | |
| ATTTAGGCAATTAACTCAGA+AGG | - | chr8.3:7903463-7903482 | MS.gene58949:intron | 30.0% | |
| CCCCACATTATACTAATATA+TGG | - | chr8.3:7902280-7902299 | MS.gene58949:intron | 30.0% | |
| GAAAAGTAATGCAAAAGTTC+AGG | - | chr8.3:7903726-7903745 | MS.gene58949:intron | 30.0% | |
| GAACTACAAAATTGTATTGG+AGG | + | chr8.3:7903189-7903208 | None:intergenic | 30.0% | |
| GCTTATGTTTGTTTATCTGT+TGG | - | chr8.3:7900843-7900862 | MS.gene58949:intron | 30.0% | |
| GTGAAATCACATTTATCCTT+TGG | + | chr8.3:7900715-7900734 | None:intergenic | 30.0% | |
| GTTGATCAGAAAACTTCTAA+TGG | + | chr8.3:7903518-7903537 | None:intergenic | 30.0% | |
| TACAAAATTGTATTGGAGGA+GGG | + | chr8.3:7903185-7903204 | None:intergenic | 30.0% | |
| TATTGTGTTCGACCTAATAT+AGG | - | chr8.3:7900679-7900698 | MS.gene58949:intron | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr8.3:7903271-7903290 | None:intergenic | 30.0% | |
| TGTGTAATGATTATTGCCTA+GGG | - | chr8.3:7902427-7902446 | MS.gene58949:intron | 30.0% | |
| TGTTTGATATCACCATTTAC+TGG | + | chr8.3:7901499-7901518 | None:intergenic | 30.0% | |
| TTACAGTTTGCAAAAGATAC+TGG | - | chr8.3:7901406-7901425 | MS.gene58949:CDS | 30.0% | |
| TTATCTATCATCCAATGGTA+CGG | + | chr8.3:7901828-7901847 | None:intergenic | 30.0% | |
| TTGGACTATTTGAACTAGTT+TGG | + | chr8.3:7901340-7901359 | None:intergenic | 30.0% | |
| TTGTGTAATGATTATTGCCT+AGG | - | chr8.3:7902426-7902445 | MS.gene58949:intron | 30.0% | |
| ! | ATATATTTTTCCCCGTTTTG+AGG | - | chr8.3:7901008-7901027 | MS.gene58949:intron | 30.0% |
| ! | CTTTAAAGAATCAGAAGACA+CGG | + | chr8.3:7903612-7903631 | None:intergenic | 30.0% |
| ! | TATATTTTTCCCCGTTTTGA+GGG | - | chr8.3:7901009-7901028 | MS.gene58949:intron | 30.0% |
| !! | TGATCAGTACATTGCTTTTA+AGG | - | chr8.3:7900451-7900470 | MS.gene58949:intron | 30.0% |
| !!! | ATTAGTTTTGTGAGACTGTT+TGG | + | chr8.3:7901289-7901308 | None:intergenic | 30.0% |
| !!! | TTAGTTTTAGTTCAACTCAG+TGG | - | chr8.3:7901788-7901807 | MS.gene58949:intron | 30.0% |
| !!! | TTAGTTTTGTGAGACTGTTT+GGG | + | chr8.3:7901288-7901307 | None:intergenic | 30.0% |
| AAGAAATAGAGGAAAATGGG+AGG | + | chr8.3:7903268-7903287 | None:intergenic | 35.0% | |
| AAGAGAGGATAAAACAGATG+AGG | - | chr8.3:7901931-7901950 | MS.gene58949:intron | 35.0% | |
| ACTAGACTACTACCTTGAAT+GGG | - | chr8.3:7902199-7902218 | MS.gene58949:intron | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | + | chr8.3:7903267-7903286 | None:intergenic | 35.0% | |
| AGGTCGAACACAATATTTCT+TGG | + | chr8.3:7900674-7900693 | None:intergenic | 35.0% | |
| ATGAGAAGCAAAATTCATGC+AGG | + | chr8.3:7902757-7902776 | None:intergenic | 35.0% | |
| ATTATGTATGGTCCAAGACT+TGG | - | chr8.3:7902523-7902542 | MS.gene58949:CDS | 35.0% | |
| CAATGTATGTCCACAGAAAA+TGG | + | chr8.3:7901671-7901690 | None:intergenic | 35.0% | |
| CTACAAAATTGTATTGGAGG+AGG | + | chr8.3:7903186-7903205 | None:intergenic | 35.0% | |
| CTTACAGACAAATCTGAGTT+CGG | + | chr8.3:7900295-7900314 | None:intergenic | 35.0% | |
| GGGCCATAAATTGTCTTAAA+AGG | - | chr8.3:7902447-7902466 | MS.gene58949:intron | 35.0% | |
| GGGGAACTACAAAATTGTAT+TGG | + | chr8.3:7903192-7903211 | None:intergenic | 35.0% | |
| GGTCGAACACAATATTTCTT+GGG | + | chr8.3:7900673-7900692 | None:intergenic | 35.0% | |
| GTACAAGCACTTAACATGAT+AGG | - | chr8.3:7901106-7901125 | MS.gene58949:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr8.3:7903272-7903291 | None:intergenic | 35.0% | |
| TACAAAACCCTCATCATTTG+GGG | + | chr8.3:7903212-7903231 | None:intergenic | 35.0% | |
| TACTAGACTACTACCTTGAA+TGG | - | chr8.3:7902198-7902217 | MS.gene58949:intron | 35.0% | |
| TATCTATCATCCAATGGTAC+GGG | + | chr8.3:7901827-7901846 | None:intergenic | 35.0% | |
| TCAATACAGTTGAGAATCCT+AGG | - | chr8.3:7902778-7902797 | MS.gene58949:intron | 35.0% | |
| TCATCTTCTGTAGTTCCAAA+GGG | + | chr8.3:7900955-7900974 | None:intergenic | 35.0% | |
| TGGCTAGGATCATATCATAA+TGG | - | chr8.3:7902310-7902329 | MS.gene58949:intron | 35.0% | |
| TTAAGACAATTTATGGCCCT+AGG | + | chr8.3:7902446-7902465 | None:intergenic | 35.0% | |
| TTAATAAACCACACTGGCAT+AGG | + | chr8.3:7902488-7902507 | None:intergenic | 35.0% | |
| TTCAAGGTAGTAGTCTAGTA+AGG | + | chr8.3:7902198-7902217 | None:intergenic | 35.0% | |
| TTCAGAGGAAGTTAAAGGTT+TGG | - | chr8.3:7901892-7901911 | MS.gene58949:intron | 35.0% | |
| TTGTCTTTGCAATGCATATC+AGG | + | chr8.3:7900907-7900926 | None:intergenic | 35.0% | |
| TTTATCCTCTCTTGTATCCA+AGG | + | chr8.3:7901924-7901943 | None:intergenic | 35.0% | |
| ! | AACTGCACATCATCTTTTTC+TGG | + | chr8.3:7901998-7902017 | None:intergenic | 35.0% |
| ! | ACTGCACATCATCTTTTTCT+GGG | + | chr8.3:7901997-7902016 | None:intergenic | 35.0% |
| ! | AGCACATTAATTTGGTTGGA+CGG | + | chr8.3:7901526-7901545 | None:intergenic | 35.0% |
| !! | AGTAAGTTTTCTAGTCCATG+TGG | - | chr8.3:7902120-7902139 | MS.gene58949:CDS | 35.0% |
| !! | TTACTTTTACCAGGATTCAG+AGG | - | chr8.3:7901877-7901896 | MS.gene58949:intron | 35.0% |
| AAACAGAGCCTAAGACTTTG+GGG | - | chr8.3:7903344-7903363 | MS.gene58949:intron | 40.0% | |
| AAAGAACTGACACCAAGTCT+TGG | + | chr8.3:7902538-7902557 | None:intergenic | 40.0% | |
| ACAAAACCCTCATCATTTGG+GGG | + | chr8.3:7903211-7903230 | None:intergenic | 40.0% | |
| ACCATGCAGACAAACAGTAA+TGG | + | chr8.3:7903760-7903779 | None:intergenic | 40.0% | |
| ACCTTATCACACCCTCAAAA+CGG | + | chr8.3:7901023-7901042 | None:intergenic | 40.0% | |
| AGTAATGCAAAAGTTCAGGC+TGG | - | chr8.3:7903730-7903749 | MS.gene58949:intron | 40.0% | |
| ATCTCTAACCTCTCTTAGCT+TGG | + | chr8.3:7902074-7902093 | None:intergenic | 40.0% | |
| CAAACAGAGCCTAAGACTTT+GGG | - | chr8.3:7903343-7903362 | MS.gene58949:intron | 40.0% | |
| CAGGATTCAGAGGAAGTTAA+AGG | - | chr8.3:7901887-7901906 | MS.gene58949:intron | 40.0% | |
| CATATAATGTCCCGTACCAT+TGG | - | chr8.3:7901814-7901833 | MS.gene58949:intron | 40.0% | |
| CATCTTCTGTAGTTCCAAAG+GGG | + | chr8.3:7900954-7900973 | None:intergenic | 40.0% | |
| CCATTTACTGGTAGCAAAAC+TGG | + | chr8.3:7901487-7901506 | None:intergenic | 40.0% | |
| CCTTCATCAATTCCCATTCA+AGG | + | chr8.3:7902214-7902233 | None:intergenic | 40.0% | |
| CCTTGAATGGGAATTGATGA+AGG | - | chr8.3:7902211-7902230 | MS.gene58949:intron | 40.0% | |
| CTGGCATTACATACACAAGT+GGG | - | chr8.3:7903554-7903573 | MS.gene58949:intron | 40.0% | |
| CTTCAATTCCTCACAACTCT+TGG | + | chr8.3:7902029-7902048 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | + | chr8.3:7903266-7903285 | None:intergenic | 40.0% | |
| GAATTTAGCCAAGAGTTGTG+AGG | - | chr8.3:7902018-7902037 | MS.gene58949:CDS | 40.0% | |
| GCAGGAAGGGTTAAAGATAT+AGG | - | chr8.3:7901048-7901067 | MS.gene58949:intron | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | + | chr8.3:7903291-7903310 | None:intergenic | 40.0% | |
| GTCATCTTCTGTAGTTCCAA+AGG | + | chr8.3:7900956-7900975 | None:intergenic | 40.0% | |
| GTTGTGAGGAATTGAAGTCA+AGG | - | chr8.3:7902032-7902051 | MS.gene58949:CDS | 40.0% | |
| TATAGGCATCATCAAGCCAA+AGG | - | chr8.3:7900696-7900715 | MS.gene58949:intron | 40.0% | |
| TCCATTACTGTTTGTCTGCA+TGG | - | chr8.3:7903756-7903775 | MS.gene58949:intron | 40.0% | |
| TCTGGCATTACATACACAAG+TGG | - | chr8.3:7903553-7903572 | MS.gene58949:intron | 40.0% | |
| TCTTTGCAATGCATATCAGG+CGG | + | chr8.3:7900904-7900923 | None:intergenic | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | + | chr8.3:7903279-7903298 | None:intergenic | 40.0% | |
| TGCTGTGATGAAGTTGAATG+AGG | - | chr8.3:7902641-7902660 | MS.gene58949:CDS | 40.0% | |
| TGGCATTACATACACAAGTG+GGG | - | chr8.3:7903555-7903574 | MS.gene58949:intron | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr8.3:7903179-7903198 | None:intergenic | 40.0% |
| ! | CCAGTTTTGCTACCAGTAAA+TGG | - | chr8.3:7901484-7901503 | MS.gene58949:intron | 40.0% |
| ! | CTTTAACTTCCTCTGAATCC+TGG | + | chr8.3:7901889-7901908 | None:intergenic | 40.0% |
| ! | GAAGTCAAGGCTTTGTATGA+TGG | - | chr8.3:7902045-7902064 | MS.gene58949:CDS | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr8.3:7903178-7903197 | None:intergenic | 40.0% |
| !! | AACACAGTAGCCATTTTCTG+TGG | - | chr8.3:7901658-7901677 | MS.gene58949:intron | 40.0% |
| !! | AGATTTGCTGAAGCAAGAGT+TGG | - | chr8.3:7902689-7902708 | MS.gene58949:intron | 40.0% |
| !! | CTCTCTCTTTTTGACTCACA+TGG | + | chr8.3:7902350-7902369 | None:intergenic | 40.0% |
| !! | GGCTTGATGATGCCTATATT+AGG | + | chr8.3:7900694-7900713 | None:intergenic | 40.0% |
| !! | GTTTTGATCTTTGCAGACTG+AGG | - | chr8.3:7902617-7902636 | MS.gene58949:CDS | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr8.3:7902961-7902980 | MS.gene58949:intron | 40.0% |
| !! | TTTGTTAGGAGGCGTTAAAG+AGG | - | chr8.3:7903704-7903723 | MS.gene58949:intron | 40.0% |
| !!! | GTTTTAGTTCAACTCAGTGG+TGG | - | chr8.3:7901791-7901810 | MS.gene58949:intron | 40.0% |
| AACGGTGCTTGATTTCTGTC+TGG | - | chr8.3:7903535-7903554 | MS.gene58949:intron | 45.0% | |
| AGCAAAACTGGTGAAGATGG+TGG | + | chr8.3:7901475-7901494 | None:intergenic | 45.0% | |
| AGGGGAAGGCTTAGGAAAAA+AGG | + | chr8.3:7903304-7903323 | None:intergenic | 45.0% | |
| ATGCTTATCCTATGCCAGTG+TGG | - | chr8.3:7902477-7902496 | MS.gene58949:intron | 45.0% | |
| CAAGTTGCCAGCTATCTGTT+AGG | - | chr8.3:7901738-7901757 | MS.gene58949:intron | 45.0% | |
| CAGACAAATCTGAGTTCGGA+AGG | + | chr8.3:7900291-7900310 | None:intergenic | 45.0% | |
| CAGATAGCTGGCAACTTGAT+AGG | + | chr8.3:7901736-7901755 | None:intergenic | 45.0% | |
| CCAAGGCATGCTGAAAATGT+GGG | - | chr8.3:7901962-7901981 | MS.gene58949:intron | 45.0% | |
| CCTTATCACACCCTCAAAAC+GGG | + | chr8.3:7901022-7901041 | None:intergenic | 45.0% | |
| CTTATCACACCCTCAAAACG+GGG | + | chr8.3:7901021-7901040 | None:intergenic | 45.0% | |
| GATAAGGTCGTAAGCAGGAA+GGG | - | chr8.3:7901035-7901054 | MS.gene58949:intron | 45.0% | |
| GCAAAACTGGTGAAGATGGT+GGG | + | chr8.3:7901474-7901493 | None:intergenic | 45.0% | |
| GCAAACAGAGCCTAAGACTT+TGG | - | chr8.3:7903342-7903361 | MS.gene58949:intron | 45.0% | |
| GGCATTACATACACAAGTGG+GGG | - | chr8.3:7903556-7903575 | MS.gene58949:intron | 45.0% | |
| GGTAGCAAAACTGGTGAAGA+TGG | + | chr8.3:7901478-7901497 | None:intergenic | 45.0% | |
| GTAGTTCCCCCAAATGATGA+GGG | - | chr8.3:7903202-7903221 | MS.gene58949:intron | 45.0% | |
| GTTAAAGTATGACGGCCACA+TGG | + | chr8.3:7902138-7902157 | None:intergenic | 45.0% | |
| TGATAAGGTCGTAAGCAGGA+AGG | - | chr8.3:7901034-7901053 | MS.gene58949:intron | 45.0% | |
| TGTAGTTCCAAAGGGGACAA+CGG | + | chr8.3:7900947-7900966 | None:intergenic | 45.0% | |
| TGTAGTTCCCCCAAATGATG+AGG | - | chr8.3:7903201-7903220 | MS.gene58949:intron | 45.0% | |
| TTAGGCTCTGTTTGCGAGTT+TGG | + | chr8.3:7903337-7903356 | None:intergenic | 45.0% | |
| ! | AGATACTGGAAAGTACGTCG+AGG | - | chr8.3:7901420-7901439 | MS.gene58949:CDS | 45.0% |
| ! | CCACATTTTCAGCATGCCTT+GGG | + | chr8.3:7901964-7901983 | None:intergenic | 45.0% |
| ! | CGGCATGTTTTCAATTCCAC+TGG | + | chr8.3:7901563-7901582 | None:intergenic | 45.0% |
| ! | CTAAAAGATAGGGTGTCCAG+TGG | - | chr8.3:7901544-7901563 | MS.gene58949:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr8.3:7902966-7902985 | MS.gene58949:intron | 45.0% |
| ! | GATGGATTCCAAGCTAAGAG+AGG | - | chr8.3:7902063-7902082 | MS.gene58949:CDS | 45.0% |
| ! | TAAAGGTTTGGAACCAGCCT+TGG | - | chr8.3:7901904-7901923 | MS.gene58949:intron | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr8.3:7903177-7903196 | None:intergenic | 45.0% |
| ! | TTGCTGAAGCAAGAGTTGGT+AGG | - | chr8.3:7902693-7902712 | MS.gene58949:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr8.3:7902965-7902984 | MS.gene58949:intron | 45.0% |
| !!! | GCAGCTGCAATTGCTTTTTG+TGG | - | chr8.3:7902855-7902874 | MS.gene58949:intron | 45.0% |
| !!! | GGGGGCATAGTTTTAAACTG+AGG | - | chr8.3:7902829-7902848 | MS.gene58949:intron | 45.0% |
| ACCAGCCTTGGATACAAGAG+AGG | - | chr8.3:7901916-7901935 | MS.gene58949:intron | 50.0% | |
| AGAGGAGCTCACTCTTAGAG+GGG | + | chr8.3:7901587-7901606 | None:intergenic | 50.0% | |
| AGGGGAAGGGAAGACTTTGA+GGG | - | chr8.3:7902989-7903008 | MS.gene58949:intron | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | + | chr8.3:7903263-7903282 | None:intergenic | 50.0% | |
| ATGTGGCCGCATTGCAATTG+CGG | + | chr8.3:7902884-7902903 | None:intergenic | 50.0% | |
| CCCAAGGCATGCTGAAAATG+TGG | - | chr8.3:7901961-7901980 | MS.gene58949:intron | 50.0% | |
| CGTCGAGGAGAAGAAACTGA+AGG | - | chr8.3:7901435-7901454 | MS.gene58949:intron | 50.0% | |
| CTCTGTTTGCGAGTTTGGAG+GGG | + | chr8.3:7903332-7903351 | None:intergenic | 50.0% | |
| GAGAGGAGCTCACTCTTAGA+GGG | + | chr8.3:7901588-7901607 | None:intergenic | 50.0% | |
| GCTCTGTTTGCGAGTTTGGA+GGG | + | chr8.3:7903333-7903352 | None:intergenic | 50.0% | |
| GGCACACAAACACACTTCCT+AGG | + | chr8.3:7902798-7902817 | None:intergenic | 50.0% | |
| GGTGTGATAAGGTCGTAAGC+AGG | - | chr8.3:7901030-7901049 | MS.gene58949:intron | 50.0% | |
| GTCTGCATGGTTGCTCTTGT+CGG | - | chr8.3:7903769-7903788 | MS.gene58949:intron | 50.0% | |
| TACGATGCAAGCTCAACGCA+CGG | - | chr8.3:7900876-7900895 | MS.gene58949:intron | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | + | chr8.3:7903262-7903281 | None:intergenic | 50.0% | |
| TCCTCTCTTGTATCCAAGGC+TGG | + | chr8.3:7901920-7901939 | None:intergenic | 50.0% | |
| TGGCTTCCGCAATTGCAATG+CGG | - | chr8.3:7902875-7902894 | MS.gene58949:intron | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr8.3:7903327-7903346 | None:intergenic | 50.0% | |
| ! | AGAGCCTAAGACTTTGGGGA+AGG | - | chr8.3:7903348-7903367 | MS.gene58949:CDS | 50.0% |
| ! | AGCCTAAGACTTTGGGGAAG+GGG | - | chr8.3:7903350-7903369 | MS.gene58949:CDS | 50.0% |
| ! | AGGAAGTGTGTTTGTGTGCC+CGG | - | chr8.3:7902798-7902817 | MS.gene58949:intron | 50.0% |
| ! | ATAAGCACCGTTGTCCCCTT+TGG | - | chr8.3:7900937-7900956 | MS.gene58949:intron | 50.0% |
| ! | CCCACATTTTCAGCATGCCT+TGG | + | chr8.3:7901965-7901984 | None:intergenic | 50.0% |
| ! | GAGCCTAAGACTTTGGGGAA+GGG | - | chr8.3:7903349-7903368 | MS.gene58949:CDS | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr8.3:7902964-7902983 | MS.gene58949:intron | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | + | chr8.3:7903176-7903195 | None:intergenic | 50.0% |
| !!! | CCCGTTTTGAGGGTGTGATA+AGG | - | chr8.3:7901019-7901038 | MS.gene58949:intron | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | + | chr8.3:7903175-7903194 | None:intergenic | 50.0% |
| AAAATGGGAGGGGAGGGCTT+TGG | + | chr8.3:7903256-7903275 | None:intergenic | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | + | chr8.3:7903255-7903274 | None:intergenic | 55.0% | |
| AAGTGTGTTTGTGTGCCCGG+GGG | - | chr8.3:7902801-7902820 | MS.gene58949:intron | 55.0% | |
| CAGATGAGGCTTCTGTCCCA+AGG | - | chr8.3:7901945-7901964 | MS.gene58949:intron | 55.0% | |
| GAAGTGTGTTTGTGTGCCCG+GGG | - | chr8.3:7902800-7902819 | MS.gene58949:intron | 55.0% | |
| GAGGAGCTCACTCTTAGAGG+GGG | + | chr8.3:7901586-7901605 | None:intergenic | 55.0% | |
| GAGGGGAAGGGAAGACTTTG+AGG | - | chr8.3:7902988-7903007 | MS.gene58949:intron | 55.0% | |
| GGAGAGGAGCTCACTCTTAG+AGG | + | chr8.3:7901589-7901608 | None:intergenic | 55.0% | |
| GGCTCTGTTTGCGAGTTTGG+AGG | + | chr8.3:7903334-7903353 | None:intergenic | 55.0% | |
| GGGGAAGGGAAGACTTTGAG+GGG | - | chr8.3:7902990-7903009 | MS.gene58949:intron | 55.0% | |
| GGTGGTGCCTAACAGATAGC+TGG | + | chr8.3:7901748-7901767 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr8.3:7902989-7902970 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | - | chr8.3:7902970-7902989 | MS.gene58949:intron | 55.0% | |
| TCCCCCTTCCCCAAAGTCTT+AGG | + | chr8.3:7903355-7903374 | None:intergenic | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | - | chr8.3:7902969-7902988 | MS.gene58949:intron | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | - | chr8.3:7902971-7902990 | MS.gene58949:intron | 55.0% | |
| ! | AAGACTTTGGGGAAGGGGGA+AGG | - | chr8.3:7903355-7903374 | MS.gene58949:CDS | 55.0% |
| ! | GAAGGGAAGACTTTGAGGGG+TGG | - | chr8.3:7902993-7903012 | MS.gene58949:intron | 55.0% |
| ! | GCCTAAGACTTTGGGGAAGG+GGG | - | chr8.3:7903351-7903370 | MS.gene58949:CDS | 55.0% |
| ! | GGAAGTGTGTTTGTGTGCCC+GGG | - | chr8.3:7902799-7902818 | MS.gene58949:intron | 55.0% |
| !! | GTGAAGATGGTGGGCTGATG+AGG | + | chr8.3:7901465-7901484 | None:intergenic | 55.0% |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | + | chr8.3:7903169-7903188 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | + | chr8.3:7903166-7903185 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | + | chr8.3:7903165-7903184 | None:intergenic | 55.0% |
| AATGGGAGGGGAGGGCTTTG+GGG | + | chr8.3:7903254-7903273 | None:intergenic | 60.0% | |
| CATGGTTGCTCTTGTCGGCG+TGG | - | chr8.3:7903774-7903793 | MS.gene58949:CDS | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr8.3:7903323-7903342 | None:intergenic | 60.0% | |
| GAGCTCACTCTTAGAGGGGG+CGG | + | chr8.3:7901583-7901602 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr8.3:7903322-7903341 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr8.3:7902976-7902995 | MS.gene58949:intron | 60.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | - | chr8.3:7902975-7902994 | MS.gene58949:intron | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr8.3:7903324-7903343 | None:intergenic | 65.0% | |
| GCTCTTGTCGGCGTGGCAGT+CGG | - | chr8.3:7903781-7903800 | MS.gene58949:CDS | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+AGG | + | chr8.3:7903312-7903331 | None:intergenic | 65.0% | |
| TGTGTTTGTGTGCCCGGGGG+TGG | - | chr8.3:7902804-7902823 | MS.gene58949:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr8.3:7903318-7903337 | None:intergenic | 65.0% | |
| TTTGTGTGCCCGGGGGTGGT+GGG | - | chr8.3:7902808-7902827 | MS.gene58949:intron | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | + | chr8.3:7903253-7903272 | None:intergenic | 65.0% |
| ACTATGCCCCCCACCACCCC+CGG | + | chr8.3:7902820-7902839 | None:intergenic | 70.0% | |
| GTTTGTGTGCCCGGGGGTGG+TGG | - | chr8.3:7902807-7902826 | MS.gene58949:intron | 70.0% | |
| TTGTGTGCCCGGGGGTGGTG+GGG | - | chr8.3:7902809-7902828 | MS.gene58949:intron | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr8.3:7903252-7903271 | None:intergenic | 70.0% |
| CTATGCCCCCCACCACCCCC+GGG | + | chr8.3:7902819-7902838 | None:intergenic | 75.0% | |
| ! | TGTGTGCCCGGGGGTGGTGG+GGG | - | chr8.3:7902810-7902829 | MS.gene58949:intron | 75.0% |
| !!! | GTGTGCCCGGGGGTGGTGGG+GGG | - | chr8.3:7902811-7902830 | MS.gene58949:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 7900261 | 7903822 | 7900261 | ID=MS.gene58949 |
| chr8.3 | mRNA | 7900261 | 7903822 | 7900261 | ID=MS.gene58949.t1;Parent=MS.gene58949 |
| chr8.3 | exon | 7903774 | 7903822 | 7903774 | ID=MS.gene58949.t1.exon1;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7903774 | 7903822 | 7903774 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7903611 | 7903681 | 7903611 | ID=MS.gene58949.t1.exon2;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7903611 | 7903681 | 7903611 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7903347 | 7903428 | 7903347 | ID=MS.gene58949.t1.exon3;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7903347 | 7903428 | 7903347 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7903093 | 7903208 | 7903093 | ID=MS.gene58949.t1.exon4;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7903093 | 7903208 | 7903093 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7902489 | 7902671 | 7902489 | ID=MS.gene58949.t1.exon5;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7902489 | 7902671 | 7902489 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7901999 | 7902193 | 7901999 | ID=MS.gene58949.t1.exon6;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7901999 | 7902193 | 7901999 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7901373 | 7901450 | 7901373 | ID=MS.gene58949.t1.exon7;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7901373 | 7901450 | 7901373 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| chr8.3 | exon | 7900261 | 7900371 | 7900261 | ID=MS.gene58949.t1.exon8;Parent=MS.gene58949.t1 |
| chr8.3 | CDS | 7900261 | 7900371 | 7900261 | ID=cds.MS.gene58949.t1;Parent=MS.gene58949.t1 |
| Gene Sequence |
| Protein sequence |
