Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59052.t1 | XP_003609292.2 | 98.2 | 661 | 10 | 2 | 1 | 660 | 1 | 660 | 0.00E+00 | 1257.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59052.t1 | F4K460 | 56.5 | 657 | 266 | 7 | 6 | 656 | 4 | 646 | 8.8e-191 | 668.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59052.t1 | G7JCV7 | 98.2 | 661 | 10 | 2 | 1 | 660 | 1 | 660 | 0.0e+00 | 1257.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene59052 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene052207 | MS.gene59052 | 0.805641 | 1.21E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene59052 | 0.804721 | 1.89E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene59052 | 0.811966 | 5.37E-51 | -1.69E-46 |
| MS.gene056933 | MS.gene59052 | 0.817053 | 4.02E-52 | -1.69E-46 |
| MS.gene056935 | MS.gene59052 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene59052 | 0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene59052 | 0.81148 | 6.86E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59052.t1 | MTR_4g114100 | 98.185 | 661 | 10 | 2 | 1 | 660 | 1 | 660 | 0.0 | 1339 |
| MS.gene59052.t1 | MTR_4g114100 | 97.830 | 553 | 10 | 2 | 109 | 660 | 1 | 552 | 0.0 | 1118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59052.t1 | AT5G20170 | 55.556 | 657 | 272 | 7 | 6 | 656 | 4 | 646 | 0.0 | 689 |
Find 160 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTATCATCTGCATTAT+TGG | 0.118201 | 8.4:+13861199 | None:intergenic |
| GCTTCATTTGGTAATGATTT+TGG | 0.118300 | 8.4:+13862910 | None:intergenic |
| GATATAGCCAATTAATAATT+TGG | 0.184216 | 8.4:+13860395 | None:intergenic |
| ATTTATCACGAGCATATATT+TGG | 0.238255 | 8.4:-13861068 | MS.gene59052:CDS |
| GCTATATCATGAAGCTCTTA+TGG | 0.252154 | 8.4:-13860380 | MS.gene59052:CDS |
| TTGGATTCCATTGAAGAAAA+TGG | 0.254887 | 8.4:-13863879 | MS.gene59052:CDS |
| TGGCTAGCCAAATTATTAAT+TGG | 0.260267 | 8.4:-13860402 | MS.gene59052:CDS |
| TCCTCTGGTAATCGTTTATC+TGG | 0.262009 | 8.4:-13861023 | MS.gene59052:CDS |
| TTATGTCATTCTCTCCAATT+TGG | 0.268432 | 8.4:-13862047 | MS.gene59052:CDS |
| CAAAGGCAATCAAATCTATC+AGG | 0.274600 | 8.4:+13860122 | None:intergenic |
| GTTTCACTCTGACAGGAATA+AGG | 0.295101 | 8.4:-13861319 | MS.gene59052:CDS |
| ATACAACCATCACTATCTTT+TGG | 0.299237 | 8.4:+13860271 | None:intergenic |
| AAACGATTACCAGAGGAAAT+TGG | 0.316692 | 8.4:+13861029 | None:intergenic |
| AGCTCTTATGGTTGGGATAA+AGG | 0.326959 | 8.4:-13860368 | MS.gene59052:CDS |
| CCAATCCCACATGGCATTCT+CGG | 0.340959 | 8.4:-13860796 | MS.gene59052:CDS |
| AATTATTTACAATTAAGTTT+AGG | 0.341678 | 8.4:-13861293 | MS.gene59052:CDS |
| AGGGCAGGTTGCAGCAAAAC+TGG | 0.343614 | 8.4:-13862241 | MS.gene59052:intron |
| TAGAATTCCGCCCTTTCTTA+AGG | 0.347705 | 8.4:+13861123 | None:intergenic |
| CCGATGGTGCATCTGAATAT+AGG | 0.363383 | 8.4:-13860186 | MS.gene59052:CDS |
| ACACTATCAAGCGTCAGTTT+TGG | 0.364899 | 8.4:-13860688 | MS.gene59052:CDS |
| TTGGAAATCAGTTGGAGATA+TGG | 0.371339 | 8.4:+13860815 | None:intergenic |
| CAATCCCACATGGCATTCTC+GGG | 0.377365 | 8.4:-13860795 | MS.gene59052:CDS |
| GATTTCTTCTGCATATCATC+TGG | 0.382798 | 8.4:+13862008 | None:intergenic |
| ATTCTTCTGTGCAGCAAGTT+GGG | 0.394134 | 8.4:-13862591 | MS.gene59052:intron |
| GTGCACTGACAAAACCAAAT+TGG | 0.395465 | 8.4:+13862033 | None:intergenic |
| GAATGGAAAATCACCTGATA+AGG | 0.401047 | 8.4:+13862500 | None:intergenic |
| GACTAAAATTCTCGCAGAGC+TGG | 0.404283 | 8.4:-13860931 | MS.gene59052:CDS |
| TTGAATATATATCTCATAAC+AGG | 0.405780 | 8.4:+13861094 | None:intergenic |
| TTGACATCTGCAGGTCTTCA+AGG | 0.406768 | 8.4:-13860840 | MS.gene59052:intron |
| TGGAGGAACCTCCACGAATA+AGG | 0.410280 | 8.4:+13860760 | None:intergenic |
| CGGCAGACATCTTTAGTTCC+AGG | 0.412328 | 8.4:-13862203 | MS.gene59052:CDS |
| TCAGGAGAATTGACTTCGCT+TGG | 0.414516 | 8.4:-13863641 | MS.gene59052:CDS |
| CTTCACCAGGTAAGTGGGAT+TGG | 0.414664 | 8.4:+13861976 | None:intergenic |
| GCCTTTGTTAGCGGCGGTGG+CGG | 0.417011 | 8.4:-13860106 | MS.gene59052:CDS |
| GAATTTGCAGTTGGCTCACC+AGG | 0.421563 | 8.4:-13863535 | MS.gene59052:CDS |
| CGTGTCAATCACGATGCAGC+TGG | 0.422657 | 8.4:-13862098 | MS.gene59052:CDS |
| ATTGCCTTTGTTAGCGGCGG+TGG | 0.424051 | 8.4:-13860109 | MS.gene59052:CDS |
| CATTCTTCTGTGCAGCAAGT+TGG | 0.429989 | 8.4:-13862592 | MS.gene59052:intron |
| AAAAGCGAGTTTCTCTAATC+AGG | 0.431002 | 8.4:-13863659 | MS.gene59052:CDS |
| TCTATGCTTGTCATTTGAGC+TGG | 0.431061 | 8.4:-13860332 | MS.gene59052:CDS |
| TGGCAACCGCGAAGAATAGA+TGG | 0.433926 | 8.4:+13860740 | None:intergenic |
| AGCAATCTTCACCAGGTAAG+TGG | 0.436697 | 8.4:+13861970 | None:intergenic |
| TTTGTTAGCGGCGGTGGCGG+TGG | 0.437315 | 8.4:-13860103 | MS.gene59052:CDS |
| TAATGTGTCTGGTCTGTTCA+AGG | 0.441270 | 8.4:-13860612 | MS.gene59052:CDS |
| TGGAAATCAGTTGGAGATAT+GGG | 0.442893 | 8.4:+13860816 | None:intergenic |
| TTGAACAGACCAGACACATT+AGG | 0.446871 | 8.4:+13860614 | None:intergenic |
| AGAATTCCGCCCTTTCTTAA+GGG | 0.447489 | 8.4:+13861124 | None:intergenic |
| TATATCTTGGTCGTTGGTCA+TGG | 0.451343 | 8.4:-13860251 | MS.gene59052:CDS |
| GACAACACCATGGCAATGGC+AGG | 0.453932 | 8.4:-13863568 | MS.gene59052:CDS |
| CTTACCTGGTGAAGATTGCT+TGG | 0.455902 | 8.4:-13861967 | MS.gene59052:CDS |
| CCGAGAATGCCATGTGGGAT+TGG | 0.457723 | 8.4:+13860796 | None:intergenic |
| TCACGATGCAGCTGGGATGC+TGG | 0.459132 | 8.4:-13862090 | MS.gene59052:CDS |
| CAAGATAATCCTACAGTTGA+AGG | 0.461028 | 8.4:-13861230 | MS.gene59052:CDS |
| GCAGGGTGAAACACTGGGCC+TGG | 0.464911 | 8.4:-13860308 | MS.gene59052:CDS |
| ATAGTGATGGTTGTATATCT+TGG | 0.465606 | 8.4:-13860264 | MS.gene59052:CDS |
| TTTCACTCTGACAGGAATAA+GGG | 0.466225 | 8.4:-13861318 | MS.gene59052:CDS |
| AGGTCGGACAAAGCTTCATT+TGG | 0.469018 | 8.4:+13862898 | None:intergenic |
| CTTGTCATTTGAGCTGGAGC+AGG | 0.470292 | 8.4:-13860326 | MS.gene59052:CDS |
| AAAGTGAAGCCTTCATTCCC+TGG | 0.475437 | 8.4:+13862185 | None:intergenic |
| GAAGGTTCTCCTAATGTGTC+TGG | 0.478887 | 8.4:-13860623 | MS.gene59052:CDS |
| ATCATGAAGCTCTTATGGTT+GGG | 0.481015 | 8.4:-13860375 | MS.gene59052:CDS |
| TCTTTAGTTCCAGGGAATGA+AGG | 0.481116 | 8.4:-13862194 | MS.gene59052:CDS |
| TGGTTGGGATAAAGGCAAAC+CGG | 0.481732 | 8.4:-13860360 | MS.gene59052:CDS |
| CAACAAAACACCCTTAAGAA+AGG | 0.489384 | 8.4:-13861134 | MS.gene59052:CDS |
| TATTCCTGTCAGAGTGAAAC+CGG | 0.492540 | 8.4:+13861322 | None:intergenic |
| CAAGCTGCCGATCAAGCGCT+TGG | 0.493218 | 8.4:-13863898 | MS.gene59052:CDS |
| GCTGGAGCAGGGTGAAACAC+TGG | 0.496632 | 8.4:-13860314 | MS.gene59052:CDS |
| AACCTGCTGTTCAAAAGCCT+TGG | 0.500540 | 8.4:+13862549 | None:intergenic |
| TATCATGAAGCTCTTATGGT+TGG | 0.500863 | 8.4:-13860376 | MS.gene59052:CDS |
| CTATGATAACAGAGAGCTCC+TGG | 0.502060 | 8.4:+13863517 | None:intergenic |
| CTTCGCTTGGGCCATTGAGA+AGG | 0.506169 | 8.4:-13863628 | MS.gene59052:CDS |
| TCCGTATTGTTGCAGAGATG+TGG | 0.508624 | 8.4:-13863691 | MS.gene59052:intron |
| ATGGAATCCAAGCGCTTGAT+CGG | 0.508867 | 8.4:+13863891 | None:intergenic |
| CTGGAGCAGGGTGAAACACT+GGG | 0.510222 | 8.4:-13860313 | MS.gene59052:CDS |
| GATTTGATTGCCTTTGTTAG+CGG | 0.511207 | 8.4:-13860115 | MS.gene59052:CDS |
| ATGACCAAGGGGCTATTGTT+CGG | 0.512435 | 8.4:-13862142 | MS.gene59052:CDS |
| AACAAAACACCCTTAAGAAA+GGG | 0.515105 | 8.4:-13861133 | MS.gene59052:CDS |
| GTCATCATGGACCTTATTCG+TGG | 0.517431 | 8.4:-13860771 | MS.gene59052:CDS |
| TTACCTGGTGAAGATTGCTT+GGG | 0.518094 | 8.4:-13861966 | MS.gene59052:CDS |
| AGCAGGTTGCTCGGGAAGCT+AGG | 0.518413 | 8.4:-13862534 | MS.gene59052:CDS |
| ACCTGCTGCAAAATAATCAC+AGG | 0.519043 | 8.4:+13860533 | None:intergenic |
| TCTGAATATAGGAAATTCCT+AGG | 0.519495 | 8.4:-13860175 | MS.gene59052:CDS |
| CAGGAGAATTGACTTCGCTT+GGG | 0.522026 | 8.4:-13863640 | MS.gene59052:CDS |
| ACCGCCACCGCCGCTAACAA+AGG | 0.522482 | 8.4:+13860105 | None:intergenic |
| TCTGGTGCACAGGCAAAAGA+TGG | 0.523613 | 8.4:-13861005 | MS.gene59052:CDS |
| AGCAAAACTGGAAAGTAAAA+CGG | 0.528928 | 8.4:-13862229 | MS.gene59052:CDS |
| CCAGAAGATGGAAGAGGGCA+TGG | 0.529484 | 8.4:-13863940 | None:intergenic |
| CATGGTGGAGAATTTGCAGT+TGG | 0.529925 | 8.4:-13863544 | MS.gene59052:CDS |
| TTGGATCCACATTTGCAACC+AGG | 0.530541 | 8.4:+13860290 | None:intergenic |
| GAAGCATTTAACACATCTAC+CGG | 0.530942 | 8.4:-13861341 | MS.gene59052:CDS |
| ACGGTAGCATTGAAGCTTGG+TGG | 0.532174 | 8.4:+13862861 | None:intergenic |
| AATGGAAAATCACCTGATAA+GGG | 0.533803 | 8.4:+13862501 | None:intergenic |
| TGCATCAGTGTTAAAGCAGA+AGG | 0.535720 | 8.4:-13860641 | MS.gene59052:CDS |
| ACTGGGCCTGGTTGCAAATG+TGG | 0.536822 | 8.4:-13860296 | MS.gene59052:CDS |
| GTAAGTTCACCTTCAACTGT+AGG | 0.539796 | 8.4:+13861221 | None:intergenic |
| ACCATGCCCTGCCATTGCCA+TGG | 0.542933 | 8.4:+13863561 | None:intergenic |
| CACGAGCATATATTTGGACG+AGG | 0.549168 | 8.4:-13861062 | MS.gene59052:CDS |
| CCTATATTCAGATGCACCAT+CGG | 0.551573 | 8.4:+13860186 | None:intergenic |
| GTTCCTCCATCTATTCTTCG+CGG | 0.551920 | 8.4:-13860746 | MS.gene59052:CDS |
| GCTTGATCGGCAGCTTGTCG+AGG | 0.552952 | 8.4:+13863904 | None:intergenic |
| TACACGGTAGCATTGAAGCT+TGG | 0.554365 | 8.4:+13862858 | None:intergenic |
| TACTTATCACTAGTGTCCAC+TGG | 0.555580 | 8.4:-13861254 | MS.gene59052:CDS |
| TTACAATTAAGTTTAGGTCA+AGG | 0.556466 | 8.4:-13861287 | MS.gene59052:CDS |
| GGCAGACATCTTTAGTTCCA+GGG | 0.559950 | 8.4:-13862202 | MS.gene59052:CDS |
| TAATCGTTTATCTGGTGCAC+AGG | 0.560408 | 8.4:-13861015 | MS.gene59052:CDS |
| GAAAACCAATCCCACTTACC+TGG | 0.563417 | 8.4:-13861981 | MS.gene59052:CDS |
| AATGTGTCTGGTCTGTTCAA+GGG | 0.565722 | 8.4:-13860611 | MS.gene59052:CDS |
| ACCATGGCAATGGCAGGGCA+TGG | 0.565803 | 8.4:-13863562 | MS.gene59052:CDS |
| GGCTGCAGATACAGCAAGGT+CGG | 0.566602 | 8.4:+13862882 | None:intergenic |
| AGATGCACCATCGGTGATGT+TGG | 0.571603 | 8.4:+13860195 | None:intergenic |
| CTTGATCGGCAGCTTGTCGA+GGG | 0.576986 | 8.4:+13863905 | None:intergenic |
| TCTCGCAGAGCTGGAAAATG+TGG | 0.585167 | 8.4:-13860922 | MS.gene59052:intron |
| TTGATAACTCATATGACCAA+GGG | 0.585539 | 8.4:-13862154 | MS.gene59052:CDS |
| GCAATCTTCACCAGGTAAGT+GGG | 0.591856 | 8.4:+13861971 | None:intergenic |
| GAAGCAGAAGAAGAGCTCAA+AGG | 0.592260 | 8.4:-13863592 | MS.gene59052:CDS |
| CATAGAATCTTCAAGTGATG+AGG | 0.592466 | 8.4:-13861934 | MS.gene59052:CDS |
| TGGAGAGAATGACATAACTC+AGG | 0.593388 | 8.4:+13862053 | None:intergenic |
| ATATTTCAAGCAATCTGCCA+AGG | 0.594489 | 8.4:-13862566 | MS.gene59052:CDS |
| GCTCAAGAGACAAGGGACCT+AGG | 0.597248 | 8.4:+13860158 | None:intergenic |
| TCTCCCAAGCAATCTTCACC+AGG | 0.597583 | 8.4:+13861963 | None:intergenic |
| TTGATTGCCTTTGTTAGCGG+CGG | 0.599362 | 8.4:-13860112 | MS.gene59052:CDS |
| GGTTGGGATAAAGGCAAACC+GGG | 0.602980 | 8.4:-13860359 | MS.gene59052:CDS |
| AATCCCACATGGCATTCTCG+GGG | 0.603288 | 8.4:-13860794 | MS.gene59052:CDS |
| AAAGGCAATCAAATCTATCA+GGG | 0.604068 | 8.4:+13860123 | None:intergenic |
| TCTACCGGTTTCACTCTGAC+AGG | 0.605331 | 8.4:-13861326 | MS.gene59052:CDS |
| GTGTCAATCACGATGCAGCT+GGG | 0.605991 | 8.4:-13862097 | MS.gene59052:CDS |
| ATGACAAGCATAGAAAGTCC+CGG | 0.606677 | 8.4:+13860341 | None:intergenic |
| TTTGATAACTCATATGACCA+AGG | 0.609084 | 8.4:-13862155 | MS.gene59052:CDS |
| AGGAGACAACACCATGGCAA+TGG | 0.615078 | 8.4:-13863572 | MS.gene59052:CDS |
| ATATAACAGCTCAAGAGACA+AGG | 0.616568 | 8.4:+13860150 | None:intergenic |
| TGGTTGTATATCTTGGTCGT+TGG | 0.617310 | 8.4:-13860257 | MS.gene59052:CDS |
| ATGGCAATGGCAGGGCATGG+TGG | 0.618107 | 8.4:-13863559 | MS.gene59052:CDS |
| TTGACACGAACAGTGGACAT+AGG | 0.619946 | 8.4:+13862113 | None:intergenic |
| ATCTTGGTCGTTGGTCATGG+AGG | 0.624297 | 8.4:-13860248 | MS.gene59052:CDS |
| ATGTGGGATTGGAAATCAGT+TGG | 0.630605 | 8.4:+13860807 | None:intergenic |
| ATCATGGACCTTATTCGTGG+AGG | 0.633336 | 8.4:-13860768 | MS.gene59052:CDS |
| AACTGATTTCCAATCCCACA+TGG | 0.635478 | 8.4:-13860805 | MS.gene59052:CDS |
| AAGACCGAACAATAGCCCCT+TGG | 0.637330 | 8.4:+13862138 | None:intergenic |
| TAACTGTGGCTAGCATGACA+AGG | 0.648372 | 8.4:-13862933 | MS.gene59052:CDS |
| TTGTCATTTGAGCTGGAGCA+GGG | 0.655430 | 8.4:-13860325 | MS.gene59052:CDS |
| TGTAGGATTATCTTGACCAG+TGG | 0.656872 | 8.4:+13861238 | None:intergenic |
| CTTCATACCAACATCACCGA+TGG | 0.660269 | 8.4:-13860202 | MS.gene59052:CDS |
| ACTGGAAAGTAAAACGGCAA+CGG | 0.663419 | 8.4:-13862223 | MS.gene59052:CDS |
| ACAACACCATGGCAATGGCA+GGG | 0.664781 | 8.4:-13863567 | MS.gene59052:CDS |
| TGGTGGCTGCAGATACAGCA+AGG | 0.664850 | 8.4:+13862878 | None:intergenic |
| TTGGGCCATTGAGAAGGACG+AGG | 0.668552 | 8.4:-13863622 | MS.gene59052:CDS |
| TCTGTTCAAGGGAAAGTCTG+AGG | 0.668820 | 8.4:-13860600 | MS.gene59052:CDS |
| GTGGATCCAAAAGATAGTGA+TGG | 0.673007 | 8.4:-13860277 | MS.gene59052:CDS |
| AACAAACGATGCAGTAACTG+TGG | 0.674822 | 8.4:-13862947 | MS.gene59052:CDS |
| AAAACACCCTTAAGAAAGGG+CGG | 0.675488 | 8.4:-13861130 | MS.gene59052:CDS |
| TGATAACTCATATGACCAAG+GGG | 0.676780 | 8.4:-13862153 | MS.gene59052:CDS |
| TATAACAGCTCAAGAGACAA+GGG | 0.677992 | 8.4:+13860151 | None:intergenic |
| ATCCCACATGGCATTCTCGG+GGG | 0.682210 | 8.4:-13860793 | MS.gene59052:CDS |
| TTGCTTGATGTACATCACGA+AGG | 0.688520 | 8.4:+13861886 | None:intergenic |
| ATCGTGATTGACACGAACAG+TGG | 0.688647 | 8.4:+13862106 | None:intergenic |
| ACCAGATAAACGATTACCAG+AGG | 0.703130 | 8.4:+13861022 | None:intergenic |
| AATATGTCAGATGATTCCAA+AGG | 0.705536 | 8.4:+13861170 | None:intergenic |
| CAACCGCGAAGAATAGATGG+AGG | 0.722513 | 8.4:+13860743 | None:intergenic |
| CACTAGTGATAAGTACACAG+AGG | 0.764753 | 8.4:+13861262 | None:intergenic |
| GCTCAAAGGAGACAACACCA+TGG | 0.768225 | 8.4:-13863578 | MS.gene59052:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTTACAATTAAGTTT+AGG | - | chr8.4:13862736-13862755 | MS.gene59052:intron | 10.0% |
| !! | TATAAAAGATAAATGAAAAA+TGG | + | chr8.4:13860720-13860739 | None:intergenic | 10.0% |
| !!! | TAGTTTTTTATTTTTTTGAC+AGG | + | chr8.4:13861647-13861666 | None:intergenic | 15.0% |
| !!! | TGTAGTTAATTTTGTTTTTA+CGG | - | chr8.4:13861214-13861233 | MS.gene59052:CDS | 15.0% |
| !! | AAAAAACAAAACTGAAAACA+TGG | - | chr8.4:13861319-13861338 | MS.gene59052:CDS | 20.0% |
| !! | AGTAGCCAAATATATATTAA+TGG | + | chr8.4:13862310-13862329 | None:intergenic | 20.0% |
| !! | ATACTAGTTGAGAAATAAAA+AGG | + | chr8.4:13860216-13860235 | None:intergenic | 20.0% |
| !! | GATATAGCCAATTAATAATT+TGG | + | chr8.4:13863637-13863656 | None:intergenic | 20.0% |
| !! | GTAGCCAAATATATATTAAT+GGG | + | chr8.4:13862309-13862328 | None:intergenic | 20.0% |
| !! | TAGCCAAATATATATTAATG+GGG | + | chr8.4:13862308-13862327 | None:intergenic | 20.0% |
| !! | TGTTATGAACATAAATAAAC+TGG | + | chr8.4:13861250-13861269 | None:intergenic | 20.0% |
| !! | TTATTTAGTAGAGTCAATTA+TGG | - | chr8.4:13862384-13862403 | MS.gene59052:intron | 20.0% |
| !! | TTGAATATATATCTCATAAC+AGG | + | chr8.4:13862938-13862957 | None:intergenic | 20.0% |
| !! | TTGTTGAAATTATTCTTCTT+AGG | - | chr8.4:13861055-13861074 | MS.gene59052:CDS | 20.0% |
| !! | TTTGAACCAATAAAATTGTT+TGG | + | chr8.4:13862333-13862352 | None:intergenic | 20.0% |
| !!! | TAGTCATTTTTTTATGTCTT+TGG | - | chr8.4:13863059-13863078 | MS.gene59052:intron | 20.0% |
| !!! | TGAACTTTAATATACCTTTT+GGG | - | chr8.4:13861559-13861578 | MS.gene59052:intron | 20.0% |
| !!! | TTGAACTTTAATATACCTTT+TGG | - | chr8.4:13861558-13861577 | MS.gene59052:intron | 20.0% |
| !!! | TTTCAAGATTTTTTTTCCTA+TGG | - | chr8.4:13860978-13860997 | MS.gene59052:CDS | 20.0% |
| ! | AAAAAAAAAGAAACAGTGTG+TGG | - | chr8.4:13860764-13860783 | MS.gene59052:CDS | 25.0% |
| ! | AAAACGTTATTCCATATTAC+AGG | + | chr8.4:13861409-13861428 | None:intergenic | 25.0% |
| ! | AAAAGCAGCAATATTAAAAC+AGG | + | chr8.4:13862632-13862651 | None:intergenic | 25.0% |
| ! | AAACTACATTGAATTGCATT+TGG | - | chr8.4:13861661-13861680 | MS.gene59052:intron | 25.0% |
| ! | AAAGCAGCAATATTAAAACA+GGG | + | chr8.4:13862631-13862650 | None:intergenic | 25.0% |
| ! | AAGCTATAAATTCAGTGAAA+AGG | + | chr8.4:13861285-13861304 | None:intergenic | 25.0% |
| ! | AGCTATAAATTCAGTGAAAA+GGG | + | chr8.4:13861284-13861303 | None:intergenic | 25.0% |
| ! | ATTATAATGAAATGTGCCAT+AGG | + | chr8.4:13860997-13861016 | None:intergenic | 25.0% |
| ! | ATTTATCACGAGCATATATT+TGG | - | chr8.4:13862961-13862980 | MS.gene59052:intron | 25.0% |
| ! | CTACCCCATTAATATATATT+TGG | - | chr8.4:13862302-13862321 | MS.gene59052:intron | 25.0% |
| ! | GATAATTGCTTGAAGTTATT+TGG | - | chr8.4:13860667-13860686 | MS.gene59052:CDS | 25.0% |
| ! | GGAAATGAAATCATAAAAAG+CGG | + | chr8.4:13860586-13860605 | None:intergenic | 25.0% |
| ! | TACCTTAATTGAAATCTTAC+AGG | - | chr8.4:13863604-13863623 | MS.gene59052:CDS | 25.0% |
| ! | TTAATATATTTGACATCTGC+AGG | - | chr8.4:13863180-13863199 | MS.gene59052:intron | 25.0% |
| ! | TTACAATTAAGTTTAGGTCA+AGG | - | chr8.4:13862742-13862761 | MS.gene59052:intron | 25.0% |
| ! | TTGAAATTATTCTTCTTAGG+TGG | - | chr8.4:13861058-13861077 | MS.gene59052:CDS | 25.0% |
| ! | TTTATAAAAGTTGAGCTTGA+TGG | + | chr8.4:13862432-13862451 | None:intergenic | 25.0% |
| !! | ACAATTTGTATGACTTTTAC+GGG | - | chr8.4:13861383-13861402 | MS.gene59052:intron | 25.0% |
| !! | AGTTATTTGGTTTCTGAAAA+AGG | - | chr8.4:13860680-13860699 | MS.gene59052:CDS | 25.0% |
| !! | CACAATTTGTATGACTTTTA+CGG | - | chr8.4:13861382-13861401 | MS.gene59052:intron | 25.0% |
| !! | TCTTTTATAAAAGCTCCATT+TGG | - | chr8.4:13860731-13860750 | MS.gene59052:CDS | 25.0% |
| !! | TTCATTTCCATTTTCTTCAA+TGG | + | chr8.4:13860160-13860179 | None:intergenic | 25.0% |
| !!! | ACACACTGTTTCTTTTTTTT+TGG | + | chr8.4:13860765-13860784 | None:intergenic | 25.0% |
| !!! | ATTCAAGATTTTTTTCCTCT+TGG | + | chr8.4:13862258-13862277 | None:intergenic | 25.0% |
| !!! | TTCAAGATTTTTTTCCTCTT+GGG | + | chr8.4:13862257-13862276 | None:intergenic | 25.0% |
| AAAGGCAATCAAATCTATCA+GGG | + | chr8.4:13863909-13863928 | None:intergenic | 30.0% | |
| AACAAAACACCCTTAAGAAA+GGG | - | chr8.4:13862896-13862915 | MS.gene59052:CDS | 30.0% | |
| AATATGTCAGATGATTCCAA+AGG | + | chr8.4:13862862-13862881 | None:intergenic | 30.0% | |
| AATGGAAAATCACCTGATAA+GGG | + | chr8.4:13861531-13861550 | None:intergenic | 30.0% | |
| ACTTATCACATTTCCTGATA+AGG | - | chr8.4:13861768-13861787 | MS.gene59052:intron | 30.0% | |
| AGCAAAACTGGAAAGTAAAA+CGG | - | chr8.4:13861800-13861819 | MS.gene59052:intron | 30.0% | |
| ATAGTGATGGTTGTATATCT+TGG | - | chr8.4:13863765-13863784 | MS.gene59052:intron | 30.0% | |
| ATGTGATAAGTAGTTGAGTA+AGG | + | chr8.4:13861759-13861778 | None:intergenic | 30.0% | |
| CACCTGTAAGATTTCAATTA+AGG | + | chr8.4:13863609-13863628 | None:intergenic | 30.0% | |
| CTAGTTGAGAAATAAAAAGG+AGG | + | chr8.4:13860213-13860232 | None:intergenic | 30.0% | |
| CTTAATTGAAATCTTACAGG+TGG | - | chr8.4:13863607-13863626 | MS.gene59052:CDS | 30.0% | |
| CTTATCACATTTCCTGATAA+GGG | - | chr8.4:13861769-13861788 | MS.gene59052:intron | 30.0% | |
| TAAAAGTGATTCGTAAGAGA+AGG | - | chr8.4:13863518-13863537 | MS.gene59052:CDS | 30.0% | |
| TACTCATAATGCCAAAAACT+TGG | + | chr8.4:13860938-13860957 | None:intergenic | 30.0% | |
| TCTGAATATAGGAAATTCCT+AGG | - | chr8.4:13863854-13863873 | MS.gene59052:intron | 30.0% | |
| TGCATTATCATCTGCATTAT+TGG | + | chr8.4:13862833-13862852 | None:intergenic | 30.0% | |
| TGGCAAGAAATTTGAAAACA+TGG | - | chr8.4:13861592-13861611 | MS.gene59052:intron | 30.0% | |
| TTAAAGTTCAAAGACGAGAA+TGG | + | chr8.4:13861549-13861568 | None:intergenic | 30.0% | |
| TTATGTCATTCTCTCCAATT+TGG | - | chr8.4:13861982-13862001 | MS.gene59052:CDS | 30.0% | |
| TTGACATGAAGATTTCTGAA+TGG | + | chr8.4:13860607-13860626 | None:intergenic | 30.0% | |
| TTGGATTCCATTGAAGAAAA+TGG | - | chr8.4:13860150-13860169 | MS.gene59052:CDS | 30.0% | |
| ! | ATACAACCATCACTATCTTT+TGG | + | chr8.4:13863761-13863780 | None:intergenic | 30.0% |
| ! | GCTACTCCAAACAATTTTAT+TGG | - | chr8.4:13862324-13862343 | MS.gene59052:intron | 30.0% |
| ! | TGGCTAGCCAAATTATTAAT+TGG | - | chr8.4:13863627-13863646 | MS.gene59052:CDS | 30.0% |
| ! | TTGATAACTCATATGACCAA+GGG | - | chr8.4:13861875-13861894 | MS.gene59052:CDS | 30.0% |
| ! | TTTCATAACCAGCTTACTTT+TGG | - | chr8.4:13861716-13861735 | MS.gene59052:intron | 30.0% |
| ! | TTTGATAACTCATATGACCA+AGG | - | chr8.4:13861874-13861893 | MS.gene59052:CDS | 30.0% |
| ! | TTTGCAAATGACCAAGTTTT+TGG | - | chr8.4:13860924-13860943 | MS.gene59052:CDS | 30.0% |
| !! | AAGATAGAAGAGTACTTACA+CGG | + | chr8.4:13861190-13861209 | None:intergenic | 30.0% |
| !! | TGATAATGCATTTTCACCTT+TGG | - | chr8.4:13862843-13862862 | MS.gene59052:intron | 30.0% |
| !! | TTTTTATGTCTTTGGCTCAT+AGG | - | chr8.4:13863067-13863086 | MS.gene59052:intron | 30.0% |
| !!! | AAGCTAGCAAATTTTTTACG+AGG | + | chr8.4:13862589-13862608 | None:intergenic | 30.0% |
| !!! | AATGATCTGATGTTTTGACT+TGG | + | chr8.4:13863312-13863331 | None:intergenic | 30.0% |
| !!! | AGCTAGCAAATTTTTTACGA+GGG | + | chr8.4:13862588-13862607 | None:intergenic | 30.0% |
| !!! | GCTTCATTTGGTAATGATTT+TGG | + | chr8.4:13861122-13861141 | None:intergenic | 30.0% |
| !!! | TTTCTTAAGGGTGTTTTGTT+GGG | + | chr8.4:13862896-13862915 | None:intergenic | 30.0% |
| AAAAGCGAGTTTCTCTAATC+AGG | - | chr8.4:13860370-13860389 | MS.gene59052:CDS | 35.0% | |
| AAACGATTACCAGAGGAAAT+TGG | + | chr8.4:13863003-13863022 | None:intergenic | 35.0% | |
| AGCAAGCGCAAATAGAAATT+AGG | + | chr8.4:13860305-13860324 | None:intergenic | 35.0% | |
| ATATAACAGCTCAAGAGACA+AGG | + | chr8.4:13863882-13863901 | None:intergenic | 35.0% | |
| ATATTTCAAGCAATCTGCCA+AGG | - | chr8.4:13861463-13861482 | MS.gene59052:intron | 35.0% | |
| ATCATGAAGCTCTTATGGTT+GGG | - | chr8.4:13863654-13863673 | MS.gene59052:CDS | 35.0% | |
| CAAAGGCAATCAAATCTATC+AGG | + | chr8.4:13863910-13863929 | None:intergenic | 35.0% | |
| CAACAAAACACCCTTAAGAA+AGG | - | chr8.4:13862895-13862914 | MS.gene59052:CDS | 35.0% | |
| CAAGATAATCCTACAGTTGA+AGG | - | chr8.4:13862799-13862818 | MS.gene59052:intron | 35.0% | |
| CATAGAATCTTCAAGTGATG+AGG | - | chr8.4:13862095-13862114 | MS.gene59052:CDS | 35.0% | |
| GAATGGAAAATCACCTGATA+AGG | + | chr8.4:13861532-13861551 | None:intergenic | 35.0% | |
| GATACATTTCTTGATGAACC+CGG | + | chr8.4:13860879-13860898 | None:intergenic | 35.0% | |
| GATTTCTTCTGCATATCATC+TGG | + | chr8.4:13862024-13862043 | None:intergenic | 35.0% | |
| GATTTGATTGCCTTTGTTAG+CGG | - | chr8.4:13863914-13863933 | MS.gene59052:CDS | 35.0% | |
| GCAAGCGCAAATAGAAATTA+GGG | + | chr8.4:13860304-13860323 | None:intergenic | 35.0% | |
| GCTACATGTAAAAACTAAGC+TGG | + | chr8.4:13862283-13862302 | None:intergenic | 35.0% | |
| GCTATATCATGAAGCTCTTA+TGG | - | chr8.4:13863649-13863668 | MS.gene59052:CDS | 35.0% | |
| GCTGGTTATGAAACAATTAG+AGG | + | chr8.4:13861709-13861728 | None:intergenic | 35.0% | |
| GTTGAGAAATAAAAAGGAGG+AGG | + | chr8.4:13860210-13860229 | None:intergenic | 35.0% | |
| TATAACAGCTCAAGAGACAA+GGG | + | chr8.4:13863881-13863900 | None:intergenic | 35.0% | |
| TATCATGAAGCTCTTATGGT+TGG | - | chr8.4:13863653-13863672 | MS.gene59052:CDS | 35.0% | |
| TATGTGCAGACTGACAATAA+AGG | - | chr8.4:13861023-13861042 | MS.gene59052:CDS | 35.0% | |
| TGATAACTCATATGACCAAG+GGG | - | chr8.4:13861876-13861895 | MS.gene59052:CDS | 35.0% | |
| TGGAAATCAGTTGGAGATAT+GGG | + | chr8.4:13863216-13863235 | None:intergenic | 35.0% | |
| TTGGAAATCAGTTGGAGATA+TGG | + | chr8.4:13863217-13863236 | None:intergenic | 35.0% | |
| TTTCACTCTGACAGGAATAA+GGG | - | chr8.4:13862711-13862730 | MS.gene59052:intron | 35.0% | |
| ! | CATTTTTGCGAACAGATATG+CGG | + | chr8.4:13860644-13860663 | None:intergenic | 35.0% |
| ! | GAAGCATTTAACACATCTAC+CGG | - | chr8.4:13862688-13862707 | MS.gene59052:intron | 35.0% |
| ! | TATGTTGTGTCATTCATCCA+GGG | - | chr8.4:13860798-13860817 | MS.gene59052:CDS | 35.0% |
| ! | TCAAGCAATTTTCAATGAGC+AGG | - | chr8.4:13862158-13862177 | MS.gene59052:CDS | 35.0% |
| ! | TTATGTTGTGTCATTCATCC+AGG | - | chr8.4:13860797-13860816 | MS.gene59052:CDS | 35.0% |
| !! | TGCTTTTTACTTGTTCTTCC+AGG | - | chr8.4:13862645-13862664 | MS.gene59052:intron | 35.0% |
| !!! | CTAGCAAATTTTTTACGAGG+GGG | + | chr8.4:13862586-13862605 | None:intergenic | 35.0% |
| !!! | CTTTCTTAAGGGTGTTTTGT+TGG | + | chr8.4:13862897-13862916 | None:intergenic | 35.0% |
| !!! | GCTAGCAAATTTTTTACGAG+GGG | + | chr8.4:13862587-13862606 | None:intergenic | 35.0% |
| !!! | TTTTTGGAGCAAGTTCCAAA+TGG | + | chr8.4:13860749-13860768 | None:intergenic | 35.0% |
| AAAACACCCTTAAGAAAGGG+CGG | - | chr8.4:13862899-13862918 | MS.gene59052:CDS | 40.0% | |
| AACAAACGATGCAGTAACTG+TGG | - | chr8.4:13861082-13861101 | MS.gene59052:CDS | 40.0% | |
| AATGTGTCTGGTCTGTTCAA+GGG | - | chr8.4:13863418-13863437 | MS.gene59052:intron | 40.0% | |
| ACCAGATAAACGATTACCAG+AGG | + | chr8.4:13863010-13863029 | None:intergenic | 40.0% | |
| ACCTGCTGCAAAATAATCAC+AGG | + | chr8.4:13863499-13863518 | None:intergenic | 40.0% | |
| ACGAGAGATAGCATAACTCT+AGG | + | chr8.4:13860269-13860288 | None:intergenic | 40.0% | |
| ACTGGAAAGTAAAACGGCAA+CGG | - | chr8.4:13861806-13861825 | MS.gene59052:intron | 40.0% | |
| AGAATTCCGCCCTTTCTTAA+GGG | + | chr8.4:13862908-13862927 | None:intergenic | 40.0% | |
| AGCGAAAAACCAATTTCCTC+TGG | - | chr8.4:13862991-13863010 | MS.gene59052:intron | 40.0% | |
| AGCTCTTATGGTTGGGATAA+AGG | - | chr8.4:13863661-13863680 | MS.gene59052:CDS | 40.0% | |
| ATGACAAGCATAGAAAGTCC+CGG | + | chr8.4:13863691-13863710 | None:intergenic | 40.0% | |
| ATGTGGGATTGGAAATCAGT+TGG | + | chr8.4:13863225-13863244 | None:intergenic | 40.0% | |
| ATTCTTCTGTGCAGCAAGTT+GGG | - | chr8.4:13861438-13861457 | MS.gene59052:intron | 40.0% | |
| CAAATTGTGCTTGTCACTCA+AGG | + | chr8.4:13861371-13861390 | None:intergenic | 40.0% | |
| CACTAGTGATAAGTACACAG+AGG | + | chr8.4:13862770-13862789 | None:intergenic | 40.0% | |
| CCTATATTCAGATGCACCAT+CGG | + | chr8.4:13863846-13863865 | None:intergenic | 40.0% | |
| CGAAGGGTTTCATGAAAATG+GGG | - | chr8.4:13862230-13862249 | MS.gene59052:CDS | 40.0% | |
| GAAATAAAAAGGAGGAGGAG+AGG | + | chr8.4:13860205-13860224 | None:intergenic | 40.0% | |
| GACATTCTCCAAAAGTAAGC+TGG | + | chr8.4:13861727-13861746 | None:intergenic | 40.0% | |
| GAGAGGAAGAAGCTTACAAA+GGG | + | chr8.4:13860188-13860207 | None:intergenic | 40.0% | |
| GATTCACTAGATCAAACACC+TGG | + | chr8.4:13862666-13862685 | None:intergenic | 40.0% | |
| GCGAAGGGTTTCATGAAAAT+GGG | - | chr8.4:13862229-13862248 | MS.gene59052:CDS | 40.0% | |
| GTAAGTTCACCTTCAACTGT+AGG | + | chr8.4:13862811-13862830 | None:intergenic | 40.0% | |
| GTGGATCCAAAAGATAGTGA+TGG | - | chr8.4:13863752-13863771 | MS.gene59052:intron | 40.0% | |
| GTTTCACTCTGACAGGAATA+AGG | - | chr8.4:13862710-13862729 | MS.gene59052:intron | 40.0% | |
| TAATCGTTTATCTGGTGCAC+AGG | - | chr8.4:13863014-13863033 | MS.gene59052:intron | 40.0% | |
| TAATGTGTCTGGTCTGTTCA+AGG | - | chr8.4:13863417-13863436 | MS.gene59052:intron | 40.0% | |
| TACTTATCACTAGTGTCCAC+TGG | - | chr8.4:13862775-13862794 | MS.gene59052:intron | 40.0% | |
| TAGAATTCCGCCCTTTCTTA+AGG | + | chr8.4:13862909-13862928 | None:intergenic | 40.0% | |
| TATATCTTGGTCGTTGGTCA+TGG | - | chr8.4:13863778-13863797 | MS.gene59052:intron | 40.0% | |
| TATTCCTGTCAGAGTGAAAC+CGG | + | chr8.4:13862710-13862729 | None:intergenic | 40.0% | |
| TCCACATCTCTGCAACAATA+CGG | + | chr8.4:13860342-13860361 | None:intergenic | 40.0% | |
| TCCTCTGGTAATCGTTTATC+TGG | - | chr8.4:13863006-13863025 | MS.gene59052:intron | 40.0% | |
| TCGACACTTAATTTCATCCC+TGG | + | chr8.4:13860818-13860837 | None:intergenic | 40.0% | |
| TGCATCAGTGTTAAAGCAGA+AGG | - | chr8.4:13863388-13863407 | MS.gene59052:intron | 40.0% | |
| TGGAGAGAATGACATAACTC+AGG | + | chr8.4:13861979-13861998 | None:intergenic | 40.0% | |
| TGGTTGTATATCTTGGTCGT+TGG | - | chr8.4:13863772-13863791 | MS.gene59052:intron | 40.0% | |
| TGTAGGATTATCTTGACCAG+TGG | + | chr8.4:13862794-13862813 | None:intergenic | 40.0% | |
| TGTGCACTATGCAAGAAAAC+TGG | + | chr8.4:13862206-13862225 | None:intergenic | 40.0% | |
| TTACCTGGTGAAGATTGCTT+GGG | - | chr8.4:13862063-13862082 | MS.gene59052:CDS | 40.0% | |
| TTGAACAGACCAGACACATT+AGG | + | chr8.4:13863418-13863437 | None:intergenic | 40.0% | |
| TTGCTTGATGTACATCACGA+AGG | + | chr8.4:13862146-13862165 | None:intergenic | 40.0% | |
| ! | AACTGATTTCCAATCCCACA+TGG | - | chr8.4:13863224-13863243 | MS.gene59052:intron | 40.0% |
| ! | ACACTATCAAGCGTCAGTTT+TGG | - | chr8.4:13863341-13863360 | MS.gene59052:intron | 40.0% |
| ! | ACTTTTACGGGCCTGTAATA+TGG | - | chr8.4:13861395-13861414 | MS.gene59052:intron | 40.0% |
| ! | AGTTTTCTTGCATAGTGCAC+AGG | - | chr8.4:13862205-13862224 | MS.gene59052:CDS | 40.0% |
| ! | GTGCACTGACAAAACCAAAT+TGG | + | chr8.4:13861999-13862018 | None:intergenic | 40.0% |
| ! | GTTTTCTTGCATAGTGCACA+GGG | - | chr8.4:13862206-13862225 | MS.gene59052:CDS | 40.0% |
| ! | TCTATGCTTGTCATTTGAGC+TGG | - | chr8.4:13863697-13863716 | MS.gene59052:intron | 40.0% |
| ! | TCTTTAGTTCCAGGGAATGA+AGG | - | chr8.4:13861835-13861854 | MS.gene59052:intron | 40.0% |
| ! | TTTTCTTGCATAGTGCACAG+GGG | - | chr8.4:13862207-13862226 | MS.gene59052:CDS | 40.0% |
| !! | TCCTGTGATTATTTTGCAGC+AGG | - | chr8.4:13863495-13863514 | MS.gene59052:intron | 40.0% |
| AAAGTGAAGCCTTCATTCCC+TGG | + | chr8.4:13861847-13861866 | None:intergenic | 45.0% | |
| AACCTGCTGTTCAAAAGCCT+TGG | + | chr8.4:13861483-13861502 | None:intergenic | 45.0% | |
| ACATCTCTGCAACAATACGG+AGG | + | chr8.4:13860339-13860358 | None:intergenic | 45.0% | |
| AGCAATCTTCACCAGGTAAG+TGG | + | chr8.4:13862062-13862081 | None:intergenic | 45.0% | |
| AGGTCGGACAAAGCTTCATT+TGG | + | chr8.4:13861134-13861153 | None:intergenic | 45.0% | |
| ATCATGGACCTTATTCGTGG+AGG | - | chr8.4:13863261-13863280 | MS.gene59052:intron | 45.0% | |
| ATCGTGATTGACACGAACAG+TGG | + | chr8.4:13861926-13861945 | None:intergenic | 45.0% | |
| ATGACCAAGGGGCTATTGTT+CGG | - | chr8.4:13861887-13861906 | MS.gene59052:CDS | 45.0% | |
| ATGGAATCCAAGCGCTTGAT+CGG | + | chr8.4:13860141-13860160 | None:intergenic | 45.0% | |
| CACGAGCATATATTTGGACG+AGG | - | chr8.4:13862967-13862986 | MS.gene59052:intron | 45.0% | |
| CATCTCTGCAACAATACGGA+GGG | + | chr8.4:13860338-13860357 | None:intergenic | 45.0% | |
| CATTCTTCTGTGCAGCAAGT+TGG | - | chr8.4:13861437-13861456 | MS.gene59052:intron | 45.0% | |
| CCGATGGTGCATCTGAATAT+AGG | - | chr8.4:13863843-13863862 | MS.gene59052:intron | 45.0% | |
| CTATGATAACAGAGAGCTCC+TGG | + | chr8.4:13860515-13860534 | None:intergenic | 45.0% | |
| CTTACCTGGTGAAGATTGCT+TGG | - | chr8.4:13862062-13862081 | MS.gene59052:CDS | 45.0% | |
| CTTCATACCAACATCACCGA+TGG | - | chr8.4:13863827-13863846 | MS.gene59052:intron | 45.0% | |
| GAAAACCAATCCCACTTACC+TGG | - | chr8.4:13862048-13862067 | MS.gene59052:CDS | 45.0% | |
| GAAGCAGAAGAAGAGCTCAA+AGG | - | chr8.4:13860437-13860456 | MS.gene59052:intron | 45.0% | |
| GAAGGTTCTCCTAATGTGTC+TGG | - | chr8.4:13863406-13863425 | MS.gene59052:intron | 45.0% | |
| GACTAAAATTCTCGCAGAGC+TGG | - | chr8.4:13863098-13863117 | MS.gene59052:intron | 45.0% | |
| GCAATCTTCACCAGGTAAGT+GGG | + | chr8.4:13862061-13862080 | None:intergenic | 45.0% | |
| GGAGAGGAAGAAGCTTACAA+AGG | + | chr8.4:13860189-13860208 | None:intergenic | 45.0% | |
| GGCGAAGGGTTTCATGAAAA+TGG | - | chr8.4:13862228-13862247 | MS.gene59052:CDS | 45.0% | |
| GTCATCATGGACCTTATTCG+TGG | - | chr8.4:13863258-13863277 | MS.gene59052:intron | 45.0% | |
| GTTCCTCCATCTATTCTTCG+CGG | - | chr8.4:13863283-13863302 | MS.gene59052:intron | 45.0% | |
| TAACTGTGGCTAGCATGACA+AGG | - | chr8.4:13861096-13861115 | MS.gene59052:CDS | 45.0% | |
| TCACATTTCCTGATAAGGGC+AGG | - | chr8.4:13861773-13861792 | MS.gene59052:intron | 45.0% | |
| TCCGTATTGTTGCAGAGATG+TGG | - | chr8.4:13860338-13860357 | MS.gene59052:CDS | 45.0% | |
| TCTGTTCAAGGGAAAGTCTG+AGG | - | chr8.4:13863429-13863448 | MS.gene59052:intron | 45.0% | |
| TGGTTGGGATAAAGGCAAAC+CGG | - | chr8.4:13863669-13863688 | MS.gene59052:CDS | 45.0% | |
| TTGACACGAACAGTGGACAT+AGG | + | chr8.4:13861919-13861938 | None:intergenic | 45.0% | |
| TTGACATCTGCAGGTCTTCA+AGG | - | chr8.4:13863189-13863208 | MS.gene59052:intron | 45.0% | |
| TTGATTGCCTTTGTTAGCGG+CGG | - | chr8.4:13863917-13863936 | MS.gene59052:CDS | 45.0% | |
| TTGGATCCACATTTGCAACC+AGG | + | chr8.4:13863742-13863761 | None:intergenic | 45.0% | |
| ! | CAGGAGAATTGACTTCGCTT+GGG | - | chr8.4:13860389-13860408 | MS.gene59052:CDS | 45.0% |
| ! | CATGGTGGAGAATTTGCAGT+TGG | - | chr8.4:13860485-13860504 | MS.gene59052:intron | 45.0% |
| ! | CTTTGAGAAGTAGCAGTTCC+GGG | - | chr8.4:13860858-13860877 | MS.gene59052:intron | 45.0% |
| ! | CTTTTCCTCGTCCTTCTCAA+TGG | + | chr8.4:13860415-13860434 | None:intergenic | 45.0% |
| ! | CTTTTGAACAGCAGGTTGCT+CGG | - | chr8.4:13861486-13861505 | MS.gene59052:intron | 45.0% |
| ! | GGCAGACATCTTTAGTTCCA+GGG | - | chr8.4:13861827-13861846 | MS.gene59052:intron | 45.0% |
| ! | TACACGGTAGCATTGAAGCT+TGG | + | chr8.4:13861174-13861193 | None:intergenic | 45.0% |
| ! | TCAGGAGAATTGACTTCGCT+TGG | - | chr8.4:13860388-13860407 | MS.gene59052:CDS | 45.0% |
| ! | TTGTCATTTGAGCTGGAGCA+GGG | - | chr8.4:13863704-13863723 | MS.gene59052:intron | 45.0% |
| ! | TTTTGAACAGCAGGTTGCTC+GGG | - | chr8.4:13861487-13861506 | MS.gene59052:intron | 45.0% |
| !! | GCTTTGAGAAGTAGCAGTTC+CGG | - | chr8.4:13860857-13860876 | MS.gene59052:intron | 45.0% |
| !! | GGTCATGGAGGATAGTTTTG+CGG | - | chr8.4:13863793-13863812 | MS.gene59052:intron | 45.0% |
| !! | GGTTTTATGGTGCCCTTATC+AGG | - | chr8.4:13861516-13861535 | MS.gene59052:intron | 45.0% |
| !!! | CAAGCGTCAGTTTTGGACTA+AGG | - | chr8.4:13863348-13863367 | MS.gene59052:intron | 45.0% |
| !!! | TCAGTTTTGGACTAAGGTCG+TGG | - | chr8.4:13863354-13863373 | MS.gene59052:intron | 45.0% |
| AAGACCGAACAATAGCCCCT+TGG | + | chr8.4:13861894-13861913 | None:intergenic | 50.0% | |
| AATCCCACATGGCATTCTCG+GGG | - | chr8.4:13863235-13863254 | MS.gene59052:intron | 50.0% | |
| ACAACACCATGGCAATGGCA+GGG | - | chr8.4:13860462-13860481 | MS.gene59052:intron | 50.0% | |
| ACAGGGAGATGCACTATCAG+TGG | + | chr8.4:13862614-13862633 | None:intergenic | 50.0% | |
| AGATGCACCATCGGTGATGT+TGG | + | chr8.4:13863837-13863856 | None:intergenic | 50.0% | |
| AGGAGACAACACCATGGCAA+TGG | - | chr8.4:13860457-13860476 | MS.gene59052:intron | 50.0% | |
| ATCTTGGTCGTTGGTCATGG+AGG | - | chr8.4:13863781-13863800 | MS.gene59052:intron | 50.0% | |
| CAACCGCGAAGAATAGATGG+AGG | + | chr8.4:13863289-13863308 | None:intergenic | 50.0% | |
| CAATCCCACATGGCATTCTC+GGG | - | chr8.4:13863234-13863253 | MS.gene59052:intron | 50.0% | |
| CATGAAAATGGGGTCCCAAG+AGG | - | chr8.4:13862240-13862259 | MS.gene59052:intron | 50.0% | |
| CCAATCCCACATGGCATTCT+CGG | - | chr8.4:13863233-13863252 | MS.gene59052:intron | 50.0% | |
| CTTCACCAGGTAAGTGGGAT+TGG | + | chr8.4:13862056-13862075 | None:intergenic | 50.0% | |
| GCTCAAAGGAGACAACACCA+TGG | - | chr8.4:13860451-13860470 | MS.gene59052:intron | 50.0% | |
| GGTTGGGATAAAGGCAAACC+GGG | - | chr8.4:13863670-13863689 | MS.gene59052:CDS | 50.0% | |
| GTGTCAATCACGATGCAGCT+GGG | - | chr8.4:13861932-13861951 | MS.gene59052:CDS | 50.0% | |
| TAGAGAACCTGTGCAACGCT+CGG | - | chr8.4:13860235-13860254 | MS.gene59052:CDS | 50.0% | |
| TCTCCCAAGCAATCTTCACC+AGG | + | chr8.4:13862069-13862088 | None:intergenic | 50.0% | |
| TCTCGCAGAGCTGGAAAATG+TGG | - | chr8.4:13863107-13863126 | MS.gene59052:intron | 50.0% | |
| TCTGGTGCACAGGCAAAAGA+TGG | - | chr8.4:13863024-13863043 | MS.gene59052:intron | 50.0% | |
| TGGAGGAACCTCCACGAATA+AGG | + | chr8.4:13863272-13863291 | None:intergenic | 50.0% | |
| TGGCAACCGCGAAGAATAGA+TGG | + | chr8.4:13863292-13863311 | None:intergenic | 50.0% | |
| ! | ACCTTTTGGGCTAATGCTGC+TGG | - | chr8.4:13861572-13861591 | MS.gene59052:intron | 50.0% |
| ! | ACGGTAGCATTGAAGCTTGG+TGG | + | chr8.4:13861171-13861190 | None:intergenic | 50.0% |
| ! | CGGCAGACATCTTTAGTTCC+AGG | - | chr8.4:13861826-13861845 | MS.gene59052:intron | 50.0% |
| ! | CTTGTCATTTGAGCTGGAGC+AGG | - | chr8.4:13863703-13863722 | MS.gene59052:intron | 50.0% |
| ! | GAATTTGCAGTTGGCTCACC+AGG | - | chr8.4:13860494-13860513 | MS.gene59052:intron | 50.0% |
| ! | GCTCGGGAAGCTAGGTTTTA+TGG | - | chr8.4:13861503-13861522 | MS.gene59052:intron | 50.0% |
| ! | TGCCAAGGCTTTTGAACAGC+AGG | - | chr8.4:13861478-13861497 | MS.gene59052:intron | 50.0% |
| !! | CATGGAGGATAGTTTTGCGG+AGG | - | chr8.4:13863796-13863815 | MS.gene59052:intron | 50.0% |
| !! | TCTACCGGTTTCACTCTGAC+AGG | - | chr8.4:13862703-13862722 | MS.gene59052:intron | 50.0% |
| ACTGGGCCTGGTTGCAAATG+TGG | - | chr8.4:13863733-13863752 | MS.gene59052:intron | 55.0% | |
| AGAGAACCTGTGCAACGCTC+GGG | - | chr8.4:13860236-13860255 | MS.gene59052:CDS | 55.0% | |
| AGGGCAGGTTGCAGCAAAAC+TGG | - | chr8.4:13861788-13861807 | MS.gene59052:intron | 55.0% | |
| ATCCCACATGGCATTCTCGG+GGG | - | chr8.4:13863236-13863255 | MS.gene59052:intron | 55.0% | |
| ATTGCCTTTGTTAGCGGCGG+TGG | - | chr8.4:13863920-13863939 | MS.gene59052:CDS | 55.0% | |
| CCGAGAATGCCATGTGGGAT+TGG | + | chr8.4:13863236-13863255 | None:intergenic | 55.0% | |
| CGTGTCAATCACGATGCAGC+TGG | - | chr8.4:13861931-13861950 | MS.gene59052:CDS | 55.0% | |
| CTGGAGCAGGGTGAAACACT+GGG | - | chr8.4:13863716-13863735 | MS.gene59052:intron | 55.0% | |
| CTTCGCTTGGGCCATTGAGA+AGG | - | chr8.4:13860401-13860420 | MS.gene59052:CDS | 55.0% | |
| CTTGATCGGCAGCTTGTCGA+GGG | + | chr8.4:13860127-13860146 | None:intergenic | 55.0% | |
| GACAACACCATGGCAATGGC+AGG | - | chr8.4:13860461-13860480 | MS.gene59052:intron | 55.0% | |
| GCCAGCAGCATTAGCCCAAA+AGG | + | chr8.4:13861576-13861595 | None:intergenic | 55.0% | |
| GCTCAAGAGACAAGGGACCT+AGG | + | chr8.4:13863874-13863893 | None:intergenic | 55.0% | |
| GGCTGCAGATACAGCAAGGT+CGG | + | chr8.4:13861150-13861169 | None:intergenic | 55.0% | |
| TGCTGCAACCTGCCCTTATC+AGG | + | chr8.4:13861784-13861803 | None:intergenic | 55.0% | |
| TGGTGGCTGCAGATACAGCA+AGG | + | chr8.4:13861154-13861173 | None:intergenic | 55.0% | |
| TTGGGCCATTGAGAAGGACG+AGG | - | chr8.4:13860407-13860426 | MS.gene59052:intron | 55.0% | |
| !! | TTTTTCCCCGAGCGTTGCAC+AGG | + | chr8.4:13860245-13860264 | None:intergenic | 55.0% |
| ACCATGCCCTGCCATTGCCA+TGG | + | chr8.4:13860471-13860490 | None:intergenic | 60.0% | |
| ACCATGGCAATGGCAGGGCA+TGG | - | chr8.4:13860467-13860486 | MS.gene59052:intron | 60.0% | |
| AGCAGGTTGCTCGGGAAGCT+AGG | - | chr8.4:13861495-13861514 | MS.gene59052:intron | 60.0% | |
| ATGGCAATGGCAGGGCATGG+TGG | - | chr8.4:13860470-13860489 | MS.gene59052:intron | 60.0% | |
| CAAGCTGCCGATCAAGCGCT+TGG | - | chr8.4:13860131-13860150 | MS.gene59052:CDS | 60.0% | |
| GACCCCCGAGAATGCCATGT+GGG | + | chr8.4:13863241-13863260 | None:intergenic | 60.0% | |
| GAGAACCTGTGCAACGCTCG+GGG | - | chr8.4:13860237-13860256 | MS.gene59052:CDS | 60.0% | |
| GCATAGTGCACAGGGGCGAA+GGG | - | chr8.4:13862214-13862233 | MS.gene59052:CDS | 60.0% | |
| GCTGGAGCAGGGTGAAACAC+TGG | - | chr8.4:13863715-13863734 | MS.gene59052:intron | 60.0% | |
| GCTTGATCGGCAGCTTGTCG+AGG | + | chr8.4:13860128-13860147 | None:intergenic | 60.0% | |
| GGCATTCTCGGGGGTCATCA+TGG | - | chr8.4:13863245-13863264 | MS.gene59052:intron | 60.0% | |
| TCACGATGCAGCTGGGATGC+TGG | - | chr8.4:13861939-13861958 | MS.gene59052:CDS | 60.0% | |
| TGACCCCCGAGAATGCCATG+TGG | + | chr8.4:13863242-13863261 | None:intergenic | 60.0% | |
| TGCATAGTGCACAGGGGCGA+AGG | - | chr8.4:13862213-13862232 | MS.gene59052:CDS | 60.0% | |
| ACCGCCACCGCCGCTAACAA+AGG | + | chr8.4:13863927-13863946 | None:intergenic | 65.0% | |
| GCAGGGTGAAACACTGGGCC+TGG | - | chr8.4:13863721-13863740 | MS.gene59052:intron | 65.0% | |
| GCCTTTGTTAGCGGCGGTGG+CGG | - | chr8.4:13863923-13863942 | MS.gene59052:CDS | 65.0% | |
| ! | TTTGTTAGCGGCGGTGGCGG+TGG | - | chr8.4:13863926-13863945 | MS.gene59052:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 13860096 | 13863955 | 13860096 | ID=MS.gene59052 |
| chr8.4 | mRNA | 13860096 | 13863955 | 13860096 | ID=MS.gene59052.t1;Parent=MS.gene59052 |
| chr8.4 | exon | 13863861 | 13863955 | 13863861 | ID=MS.gene59052.t1.exon1;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13863861 | 13863955 | 13863861 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13863503 | 13863698 | 13863503 | ID=MS.gene59052.t1.exon2;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13863503 | 13863698 | 13863503 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13862861 | 13862974 | 13862861 | ID=MS.gene59052.t1.exon3;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13862861 | 13862974 | 13862861 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13862514 | 13862599 | 13862514 | ID=MS.gene59052.t1.exon4;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13862514 | 13862599 | 13862514 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13861872 | 13862256 | 13861872 | ID=MS.gene59052.t1.exon5;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13861872 | 13862256 | 13861872 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13860923 | 13861384 | 13860923 | ID=MS.gene59052.t1.exon6;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13860923 | 13861384 | 13860923 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13860535 | 13860849 | 13860535 | ID=MS.gene59052.t1.exon7;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13860535 | 13860849 | 13860535 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| chr8.4 | exon | 13860096 | 13860425 | 13860096 | ID=MS.gene59052.t1.exon8;Parent=MS.gene59052.t1 |
| chr8.4 | CDS | 13860096 | 13860425 | 13860096 | ID=cds.MS.gene59052.t1;Parent=MS.gene59052.t1 |
| Gene Sequence |
| Protein sequence |
