AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052207

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052207.t1 MTR_3g087220 98.421 570 9 0 1 570 1 570 0.0 1179
MS.gene052207.t1 MTR_5g071360 77.878 556 123 0 1 556 1 556 0.0 938
MS.gene052207.t1 MTR_3g464580 74.517 569 142 2 1 566 1 569 0.0 913
MS.gene052207.t1 MTR_5g071360 77.255 510 116 0 1 510 1 510 0.0 854
MS.gene052207.t1 MTR_3g464580 75.639 509 123 1 1 508 1 509 0.0 832
MS.gene052207.t1 MTR_3g464580 76.562 448 103 2 1 447 1 447 0.0 735
MS.gene052207.t1 MTR_5g069310 69.298 114 35 0 443 556 2 115 8.10e-52 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052207.t1 AT5G10240 85.018 554 83 0 1 554 1 554 0.0 1018
MS.gene052207.t1 AT5G65010 85.273 550 81 0 1 550 1 550 0.0 1016
MS.gene052207.t1 AT5G65010 85.118 551 81 1 1 550 1 551 0.0 1012
MS.gene052207.t1 AT5G10240 84.477 554 85 1 1 554 1 553 0.0 1007
MS.gene052207.t1 AT3G47340 75.221 565 139 1 1 565 1 564 0.0 933
MS.gene052207.t1 AT3G47340 76.378 508 120 0 1 508 1 508 0.0 855
MS.gene052207.t1 AT3G47340 77.218 417 95 0 1 417 1 417 0.0 714
MS.gene052207.t1 AT3G47340 77.483 302 68 0 116 417 1 302 0.0 519

Find 136 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCATTACCCCTCTTTATT+TGG 0.114873 3.2:+74476398 MS.gene052207:CDS
CCAAGCCGAAGTTGATTTAT+TGG 0.156555 3.2:-74479081 None:intergenic
ATACAAACCTTTGGCAAATA+TGG 0.166150 3.2:-74479570 None:intergenic
GTTCTATGGCATTAGGTTAA+TGG 0.192017 3.2:+74476096 MS.gene052207:intron
TTCTCTATCCTTTCAATATC+AGG 0.209485 3.2:-74479510 None:intergenic
GAAGGTTCAGATGAAATATT+TGG 0.221785 3.2:+74478832 MS.gene052207:CDS
CAAATCATTGGGAGTGAAAA+TGG 0.232355 3.2:+74478798 MS.gene052207:CDS
TACCCCTCTTTATTTGGGTT+GGG 0.252968 3.2:+74476404 MS.gene052207:CDS
GGCATTACCCCTCTTTATTT+GGG 0.262355 3.2:+74476399 MS.gene052207:CDS
TTCTATGGCATTAGGTTAAT+GGG 0.266561 3.2:+74476097 MS.gene052207:intron
CTTCCTTGTTAGGCGCCTTA+TGG 0.267987 3.2:-74478870 None:intergenic
GCTATTGTGGACCCTACTTC+TGG 0.276442 3.2:+74475934 MS.gene052207:CDS
TGATGAAGCTCTTCCTTGTT+AGG 0.297491 3.2:-74478880 None:intergenic
TGCAGTGGCCAATAGATATT+TGG 0.298358 3.2:+74478324 MS.gene052207:CDS
TTCGATGATGCGAGCGCGTT+TGG 0.303802 3.2:-74475827 None:intergenic
ATTGCTGCTCGTGATGCTAT+TGG 0.320060 3.2:+74476378 MS.gene052207:CDS
TGTGATTAGTATGAAGAATA+TGG 0.322666 3.2:+74476285 MS.gene052207:intron
CAATAAATCAACTTCGGCTT+GGG 0.326748 3.2:+74479082 MS.gene052207:CDS
TATCGATCCGGAGTGGAAAA+TGG 0.332343 3.2:+74479160 MS.gene052207:CDS
CGAACTTCATTTCACAGTTC+AGG 0.340310 3.2:+74478575 MS.gene052207:CDS
TTACCCCTCTTTATTTGGGT+TGG 0.360345 3.2:+74476403 MS.gene052207:CDS
GCATATATATTCCAGCAAAC+AGG 0.371801 3.2:+74477352 MS.gene052207:CDS
AGAGGCACGTGTACCGTTCT+TGG 0.383283 3.2:+74479109 MS.gene052207:CDS
ACCCCTCTTTATTTGGGTTG+GGG 0.385041 3.2:+74476405 MS.gene052207:CDS
TGTTCTGTTGTCCGGAGGAC+TGG 0.389790 3.2:+74478285 MS.gene052207:CDS
CCCTTTGGTGTTCTGTTGTC+CGG 0.394985 3.2:+74478277 MS.gene052207:CDS
TTACATCATATGTTTCAATA+TGG 0.407697 3.2:-74478729 None:intergenic
CCTTCAGGTCGTGCCGCGCT+TGG 0.420882 3.2:+74480187 MS.gene052207:CDS
GCTGCCAGGTCAACAGTTCC+AGG 0.421132 3.2:+74480094 MS.gene052207:CDS
TACTTTCTGCATTGGTATAG+AGG 0.424643 3.2:+74478387 MS.gene052207:CDS
CAGTTGGATTGATGGTTTGA+AGG 0.424749 3.2:+74479715 MS.gene052207:CDS
GTCGGATACAGTTGGATTGA+TGG 0.430598 3.2:+74479707 MS.gene052207:CDS
GTTGGATCATAGCGTGTTGA+TGG 0.432444 3.2:-74477564 None:intergenic
TCTTTAGAGGGATCCATTGT+CGG 0.443265 3.2:-74480260 None:intergenic
AGTATCAGCCAAATATCTAT+TGG 0.448146 3.2:-74478332 None:intergenic
TACTGACGCTGCCCGTCAGT+GGG 0.449523 3.2:+74478351 MS.gene052207:CDS
TATTGAAAGGATAGAGAAAT+GGG 0.451135 3.2:+74479515 MS.gene052207:CDS
CATGCCACACTAGGGCCTCC+TGG 0.457389 3.2:-74480112 None:intergenic
ATATTGAAAGGATAGAGAAA+TGG 0.459884 3.2:+74479514 MS.gene052207:CDS
TATTTGGGTTGGGGCCATGA+TGG 0.462409 3.2:+74476414 MS.gene052207:CDS
TACTGCAAAAGCTGTGGAAT+GGG 0.464980 3.2:+74480138 MS.gene052207:CDS
AGGTTACCTGTATTTCCATA+AGG 0.465018 3.2:+74478855 MS.gene052207:CDS
AAATCTCATCAATTTCGAAC+TGG 0.470336 3.2:+74476156 MS.gene052207:CDS
GCAGTACTGCATGCCACACT+AGG 0.471392 3.2:-74480121 None:intergenic
TAGGCGCCTTATGGAAATAC+AGG 0.475864 3.2:-74478861 None:intergenic
AGAAGAGTTTGTTGATATGC+TGG 0.476984 3.2:+74476308 MS.gene052207:CDS
ATACTGACGCTGCCCGTCAG+TGG 0.477781 3.2:+74478350 MS.gene052207:CDS
AAAGAGGTAGCAAATTATCT+TGG 0.479356 3.2:+74478540 MS.gene052207:CDS
AAGTTGATTTATTGGCTCTC+AGG 0.481018 3.2:-74479073 None:intergenic
CTCGTCACTTGTTGCTGCAG+TGG 0.482865 3.2:+74478309 MS.gene052207:CDS
CAGGTTAGAGCCTACTTGTT+CGG 0.489084 3.2:-74479747 None:intergenic
CAATGCAAACCACTCCAATC+AGG 0.489191 3.2:-74475877 None:intergenic
CTTTAGAGGGATCCATTGTC+GGG 0.500502 3.2:-74480259 None:intergenic
AGAGGTTGATCTCCAGAAGT+AGG 0.500746 3.2:-74475946 None:intergenic
GATACGTACGGTGACAATAA+CGG 0.505224 3.2:-74475986 None:intergenic
CATTTCAACAGGGTGCTGCC+AGG 0.506834 3.2:+74480080 MS.gene052207:intron
CCAATAAATCAACTTCGGCT+TGG 0.506921 3.2:+74479081 MS.gene052207:CDS
GTGCGGAATCTTAGCAGTGT+TGG 0.507911 3.2:+74475783 MS.gene052207:CDS
TGCGGAATCTTAGCAGTGTT+GGG 0.508911 3.2:+74475784 MS.gene052207:CDS
CAGTTACATACTTTCTGCAT+TGG 0.510357 3.2:+74478379 MS.gene052207:CDS
AACTTCGGCTTGGGGTATAG+AGG 0.510802 3.2:+74479091 MS.gene052207:CDS
TCATCAACGTCTTGCTATTG+TGG 0.511777 3.2:+74475921 MS.gene052207:CDS
CACTGCCATGGATATCGATC+CGG 0.514410 3.2:+74479148 MS.gene052207:CDS
TGCGACATAGAGGACCTGAT+TGG 0.528704 3.2:+74475863 MS.gene052207:CDS
GTCTTGTCATAGTTGTAAAG+AGG 0.529718 3.2:-74475964 None:intergenic
GGAGTGAAAATGGTTCTGTC+TGG 0.532933 3.2:+74478808 MS.gene052207:CDS
TTTCTGGACATAAGAAACAT+TGG 0.539930 3.2:-74478772 None:intergenic
GCCTCCTGGAACTGTTGACC+TGG 0.540604 3.2:-74480098 None:intergenic
GGTTCAGATGAAATATTTGG+AGG 0.542536 3.2:+74478835 MS.gene052207:CDS
AGCTGCATGAACACCAAGCG+CGG 0.545486 3.2:-74480200 None:intergenic
ATAAATTCTTTATCCAAGAA+CGG 0.547808 3.2:-74479122 None:intergenic
TGGCCCCAACCCAAATAAAG+AGG 0.550694 3.2:-74476408 None:intergenic
AAGTGACGAGTCCAGTCCTC+CGG 0.552950 3.2:-74478296 None:intergenic
AAACACTCCTACCACAAAAG+AGG 0.557038 3.2:+74479881 MS.gene052207:CDS
AAAATAAAAGAGCCCGACAA+TGG 0.557915 3.2:+74480247 MS.gene052207:CDS
GAGGTTGATCTCCAGAAGTA+GGG 0.558161 3.2:-74475945 None:intergenic
TGTTCATGCAGCTGCATACA+AGG 0.562587 3.2:+74480210 MS.gene052207:CDS
AACACTCCTACCACAAAAGA+GGG 0.564176 3.2:+74479882 MS.gene052207:CDS
CCAAGCGCGGCACGACCTGA+AGG 0.564595 3.2:-74480187 None:intergenic
ATGATGACTGATGTACCCTT+TGG 0.566933 3.2:+74478262 MS.gene052207:CDS
GGCCCCAACCCAAATAAAGA+GGG 0.568153 3.2:-74476407 None:intergenic
AAGGCCTCATGCAAAACCGT+TGG 0.569287 3.2:-74477582 None:intergenic
AGTTTGTTGATATGCTGGAT+GGG 0.570850 3.2:+74476313 MS.gene052207:CDS
AATCTTAGCAGTGTTGGGTG+TGG 0.573813 3.2:+74475789 MS.gene052207:CDS
AGAATTTATCAACACTGCCA+TGG 0.574909 3.2:+74479136 MS.gene052207:CDS
TTGCTGGAATATATATGCCC+TGG 0.575185 3.2:-74477347 None:intergenic
TAACTGTGATCCCCACTGAC+GGG 0.578963 3.2:-74478362 None:intergenic
TTTGCATGAGGCCTTTGAGA+GGG 0.579086 3.2:+74477590 MS.gene052207:CDS
GCGGCAGCCACATACCATCA+TGG 0.580966 3.2:-74476428 None:intergenic
CCGGACAACAGAACACCAAA+GGG 0.583577 3.2:-74478277 None:intergenic
AGATAAAGCCTGATATTGAA+AGG 0.584487 3.2:+74479502 MS.gene052207:intron
CATATATATTCCAGCAAACA+GGG 0.584924 3.2:+74477353 MS.gene052207:CDS
GGATTTGAGAGCCGCAAAAG+AGG 0.588975 3.2:+74478524 MS.gene052207:CDS
GCGATGGTGTCGGATACAGT+TGG 0.589745 3.2:+74479699 MS.gene052207:CDS
TTTCCATAAGGCGCCTAACA+AGG 0.590033 3.2:+74478867 MS.gene052207:CDS
CAAAAGAGGGATACCACTAC+AGG 0.590975 3.2:+74479895 MS.gene052207:CDS
GAGAGCCAATAAATCAACTT+CGG 0.592271 3.2:+74479076 MS.gene052207:CDS
AATAAATCAACTTCGGCTTG+GGG 0.592392 3.2:+74479083 MS.gene052207:CDS
GAGTTTGTTGATATGCTGGA+TGG 0.592504 3.2:+74476312 MS.gene052207:CDS
GTAACTGTGATCCCCACTGA+CGG 0.594247 3.2:-74478363 None:intergenic
TTGCAGGAGGATTAAGAAGG+TGG 0.595137 3.2:+74477511 MS.gene052207:intron
GGAAGGTATAGATGCACTTG+AGG 0.595941 3.2:+74478696 MS.gene052207:intron
ATCAACACGCTATGATCCAA+CGG 0.596803 3.2:+74477566 MS.gene052207:CDS
GCATCATCGAATTGTCTCGC+AGG 0.596887 3.2:+74475839 MS.gene052207:CDS
TCTCGCAGGTTGCGACATAG+AGG 0.597101 3.2:+74475853 MS.gene052207:CDS
CCACTCCGGATCGATATCCA+TGG 0.600070 3.2:-74479153 None:intergenic
TGAGAATCCATATTTGCCAA+AGG 0.602556 3.2:+74479563 MS.gene052207:CDS
AATCCAGCATGGTCTTTAGA+GGG 0.604010 3.2:-74480272 None:intergenic
AAAATGGTTCTGTCTGGAGA+AGG 0.606208 3.2:+74478814 MS.gene052207:CDS
GGAATAGCTAACCCTCTCAA+AGG 0.609261 3.2:-74477601 None:intergenic
TCCGGACAACAGAACACCAA+AGG 0.611807 3.2:-74478278 None:intergenic
GTACTGCAAAAGCTGTGGAA+TGG 0.613846 3.2:+74480137 MS.gene052207:CDS
GAACAGTTCAGCGATGGTGT+CGG 0.616755 3.2:+74479689 MS.gene052207:CDS
GCACATATTGTACAGGCAGA+AGG 0.619788 3.2:+74479667 MS.gene052207:intron
TCTTTGCAGGAGGATTAAGA+AGG 0.620740 3.2:+74477508 MS.gene052207:intron
CAGTACTGCATGCCACACTA+GGG 0.621411 3.2:-74480120 None:intergenic
CAGAAGGAACAGTTCAGCGA+TGG 0.621633 3.2:+74479683 MS.gene052207:CDS
CAAGCGCGGCACGACCTGAA+GGG 0.622971 3.2:-74480186 None:intergenic
TTTGGTGTTCTGTTGTCCGG+AGG 0.633191 3.2:+74478280 MS.gene052207:CDS
TCTATGGCATTAGGTTAATG+GGG 0.644846 3.2:+74476098 MS.gene052207:intron
TTGTTGGCAGCCGTCATGTG+CGG 0.647753 3.2:+74475766 None:intergenic
CATAGAGGACCTGATTGGAG+TGG 0.648591 3.2:+74475868 MS.gene052207:CDS
AGTTCCAGGAGGCCCTAGTG+TGG 0.651099 3.2:+74480108 MS.gene052207:CDS
CTGGAATATATATGCCCTGG+AGG 0.658198 3.2:-74477344 None:intergenic
CTGTGGAATGGGATGCAGCA+TGG 0.665004 3.2:+74480149 MS.gene052207:CDS
TAGCAAGACGTTGATGAGCG+AGG 0.666348 3.2:-74475915 None:intergenic
CCATGGATATCGATCCGGAG+TGG 0.674824 3.2:+74479153 MS.gene052207:CDS
GCCCCAACCCAAATAAAGAG+GGG 0.687236 3.2:-74476406 None:intergenic
ACTGACGCTGCCCGTCAGTG+GGG 0.690660 3.2:+74478352 MS.gene052207:CDS
GAACTGTGAAATGAAGTTCG+TGG 0.696854 3.2:-74478572 None:intergenic
GCCAGGTCAACAGTTCCAGG+AGG 0.705953 3.2:+74480097 MS.gene052207:CDS
ATGCAGTACTGCAAAAGCTG+TGG 0.707096 3.2:+74480132 MS.gene052207:CDS
ATTTGCTCTGAGAACCATGG+TGG 0.708717 3.2:-74477540 None:intergenic
GGAATTTGCTCTGAGAACCA+TGG 0.723639 3.2:-74477543 None:intergenic
GAAGGTGGTACAATCCACCA+TGG 0.728627 3.2:+74477526 MS.gene052207:CDS
CTGTGAAATGAAGTTCGTGG+TGG 0.746248 3.2:-74478569 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTACATAAAAATATG+GGG - chr3.2:74478949-74478968 None:intergenic 10.0%
!! ACATATCTTTATAAACATTA+AGG + chr3.2:74477003-74477022 MS.gene052207:intron 15.0%
!! TGAATTAGATATATCATTTA+TGG + chr3.2:74477236-74477255 MS.gene052207:intron 15.0%
!!! AATTATGGTATATTACTTTT+CGG - chr3.2:74478915-74478934 None:intergenic 15.0%
!!! AATTTATTTTACAAGAAAAC+TGG - chr3.2:74479361-74479380 None:intergenic 15.0%
!!! TTCATGTTCAAATTTAAAAT+TGG - chr3.2:74480007-74480026 None:intergenic 15.0%
!! AAAAATGTTACAATAAGAAG+CGG - chr3.2:74476450-74476469 None:intergenic 20.0%
!! ACAGTTTAAAAAAATTACAC+AGG - chr3.2:74476617-74476636 None:intergenic 20.0%
!! ATAAATTCTTTATCCAAGAA+CGG - chr3.2:74479125-74479144 None:intergenic 20.0%
!! CATATAACTACTATTACTTA+TGG - chr3.2:74478463-74478482 None:intergenic 20.0%
!! GACATTATATACTTGATAAA+TGG + chr3.2:74479810-74479829 MS.gene052207:intron 20.0%
!! TAACCAAGAAAAAGTTAAAA+AGG - chr3.2:74478209-74478228 None:intergenic 20.0%
!! TAGATATATCATTTATGGAA+GGG + chr3.2:74477241-74477260 MS.gene052207:intron 20.0%
!! TATCAAGTATATAATGTCAA+TGG - chr3.2:74479808-74479827 None:intergenic 20.0%
!! TTACATCATATGTTTCAATA+TGG - chr3.2:74478732-74478751 None:intergenic 20.0%
!! TTAGATATATCATTTATGGA+AGG + chr3.2:74477240-74477259 MS.gene052207:intron 20.0%
!! TTATAGACAAAATAAAAGTG+AGG - chr3.2:74477941-74477960 None:intergenic 20.0%
!! TTCAAAGTCATACATTTAAT+TGG + chr3.2:74476690-74476709 MS.gene052207:intron 20.0%
!! TTGTAAAATAAATTTGTCTG+TGG + chr3.2:74479367-74479386 MS.gene052207:intron 20.0%
!! TTTACGTATAATTTCTCAAA+AGG - chr3.2:74478046-74478065 None:intergenic 20.0%
!!! AATTTTTCGTTAATTTCATG+AGG - chr3.2:74479478-74479497 None:intergenic 20.0%
!!! GGTAATCTAATATTCTATTT+TGG + chr3.2:74478663-74478682 MS.gene052207:intron 20.0%
!!! TGAAGCTACAAATTTTATAT+AGG - chr3.2:74476782-74476801 None:intergenic 20.0%
!!! TTCAAATTTAAAATTGGTCA+AGG - chr3.2:74480001-74480020 None:intergenic 20.0%
! AAGGTAAAATGGTAGATAAA+GGG - chr3.2:74478612-74478631 None:intergenic 25.0%
! ATATCATTTGCAACAAACTT+AGG + chr3.2:74477960-74477979 MS.gene052207:intron 25.0%
! ATATTGAAAGGATAGAGAAA+TGG + chr3.2:74479514-74479533 MS.gene052207:CDS 25.0%
! TAAAGAGTTGTCTATACATT+TGG + chr3.2:74477184-74477203 MS.gene052207:intron 25.0%
! TACATTTCCTTGAAAAAACT+AGG - chr3.2:74477075-74477094 None:intergenic 25.0%
! TATTGAAAGGATAGAGAAAT+GGG + chr3.2:74479515-74479534 MS.gene052207:CDS 25.0%
! TCCAGAAAAATCAAATCATT+GGG + chr3.2:74478787-74478806 MS.gene052207:CDS 25.0%
! TGTGATTAGTATGAAGAATA+TGG + chr3.2:74476285-74476304 MS.gene052207:intron 25.0%
! TGTTTATAAAGATATGTAGC+AGG - chr3.2:74477000-74477019 None:intergenic 25.0%
! TTGTAACTTTACTTCTTTCT+TGG + chr3.2:74479185-74479204 MS.gene052207:intron 25.0%
! TTTACAAGAGTAACCATAAT+CGG - chr3.2:74477406-74477425 None:intergenic 25.0%
!! AATTTATATCTTTTCCTCCA+GGG + chr3.2:74477330-74477349 MS.gene052207:CDS 25.0%
!! AGGCATTAATCTTTTACATT+CGG + chr3.2:74477135-74477154 MS.gene052207:intron 25.0%
!! GCTTTAAATTGCACAATAAA+TGG - chr3.2:74476519-74476538 None:intergenic 25.0%
!!! ATTATTTTGCAGGATCAATA+TGG + chr3.2:74477267-74477286 MS.gene052207:intron 25.0%
!!! CATCCTTTTTAACTTTTTCT+TGG + chr3.2:74478203-74478222 MS.gene052207:intron 25.0%
!!! TACCAGTTTATTCAAGTTTT+TGG + chr3.2:74479004-74479023 MS.gene052207:intron 25.0%
!!! TTCTATTTTGGCTATATATC+AGG + chr3.2:74478675-74478694 MS.gene052207:intron 25.0%
!!! TTTTGAGAAGTTATTTCCAA+AGG + chr3.2:74479923-74479942 MS.gene052207:CDS 25.0%
AAAGAGGTAGCAAATTATCT+TGG + chr3.2:74478540-74478559 MS.gene052207:CDS 30.0%
AAATCTCATCAATTTCGAAC+TGG + chr3.2:74476156-74476175 MS.gene052207:CDS 30.0%
AAATTCCAATCATGAGCTTA+TGG - chr3.2:74478072-74478091 None:intergenic 30.0%
AAGACTATACAATTCACCTT+TGG - chr3.2:74479942-74479961 None:intergenic 30.0%
AATAAATGGTTCAATTCGAG+TGG - chr3.2:74476505-74476524 None:intergenic 30.0%
AATCATCTGACAATCACAAT+TGG - chr3.2:74476644-74476663 None:intergenic 30.0%
AATTCCAATCATGAGCTTAT+GGG - chr3.2:74478071-74478090 None:intergenic 30.0%
AGATAAAGCCTGATATTGAA+AGG + chr3.2:74479502-74479521 MS.gene052207:intron 30.0%
AGTATCAGCCAAATATCTAT+TGG - chr3.2:74478335-74478354 None:intergenic 30.0%
AGTTGATTGATACAAACCTT+TGG - chr3.2:74479582-74479601 None:intergenic 30.0%
ATAAGCTCATGATTGGAATT+TGG + chr3.2:74478071-74478090 MS.gene052207:intron 30.0%
ATACAAACCTTTGGCAAATA+TGG - chr3.2:74479573-74479592 None:intergenic 30.0%
ATCATCTGACAATCACAATT+GGG - chr3.2:74476643-74476662 None:intergenic 30.0%
ATGAACCATTTCATTTCAAC+AGG + chr3.2:74480069-74480088 MS.gene052207:intron 30.0%
CAAACGATGAAATAACTCAA+TGG - chr3.2:74477635-74477654 None:intergenic 30.0%
CAAGGTAAAATGGTAGATAA+AGG - chr3.2:74478613-74478632 None:intergenic 30.0%
CACAAAATGTTGTCAAATAG+CGG + chr3.2:74477769-74477788 MS.gene052207:intron 30.0%
CACCAAAAACTTGAATAAAC+TGG - chr3.2:74479009-74479028 None:intergenic 30.0%
CATATATATTCCAGCAAACA+GGG + chr3.2:74477353-74477372 MS.gene052207:CDS 30.0%
CTTAGTATCAACTACATCAA+AGG - chr3.2:74478168-74478187 None:intergenic 30.0%
CTTGGAGTAAAATTTAGACA+AGG - chr3.2:74477450-74477469 None:intergenic 30.0%
GAAGGTTCAGATGAAATATT+TGG + chr3.2:74478832-74478851 MS.gene052207:CDS 30.0%
GATAGAAGATAAGATACGTA+CGG - chr3.2:74476001-74476020 None:intergenic 30.0%
GTCCAGAAAAATCAAATCAT+TGG + chr3.2:74478786-74478805 MS.gene052207:CDS 30.0%
TACATTTGGTTATGTATTCG+TGG + chr3.2:74477198-74477217 MS.gene052207:intron 30.0%
TAGACAAGGAGAAAAACAAA+TGG - chr3.2:74477436-74477455 None:intergenic 30.0%
TATATACTTGATAAATGGCC+AGG + chr3.2:74479815-74479834 MS.gene052207:intron 30.0%
TGAACCATTTCATTTCAACA+GGG + chr3.2:74480070-74480089 MS.gene052207:intron 30.0%
TGTAAGTGTGTATCTTATCT+TGG - chr3.2:74477468-74477487 None:intergenic 30.0%
TTCTATGGCATTAGGTTAAT+GGG + chr3.2:74476097-74476116 MS.gene052207:intron 30.0%
TTCTCTATCCTTTCAATATC+AGG - chr3.2:74479513-74479532 None:intergenic 30.0%
TTTCTGGACATAAGAAACAT+TGG - chr3.2:74478775-74478794 None:intergenic 30.0%
! ATAAACTGGTAAAAGTACAC+AGG - chr3.2:74478995-74479014 None:intergenic 30.0%
! ATTTTCTGTTCTATGGCATT+AGG + chr3.2:74476089-74476108 MS.gene052207:intron 30.0%
! CAATTTATATCTTTTCCTCC+AGG + chr3.2:74477329-74477348 MS.gene052207:CDS 30.0%
! TCTTGTAAGTGTTTTCTAGA+AGG + chr3.2:74476203-74476222 MS.gene052207:intron 30.0%
! TTGTCACATTTTCTGTTCTA+TGG + chr3.2:74476082-74476101 MS.gene052207:intron 30.0%
!! TCCCAATGATTTGATTTTTC+TGG - chr3.2:74478791-74478810 None:intergenic 30.0%
!! TTTTTCAGCACATATTGTAC+AGG + chr3.2:74479660-74479679 MS.gene052207:intron 30.0%
!!! AACATGTCCTAGTTTTTTCA+AGG + chr3.2:74477065-74477084 MS.gene052207:intron 30.0%
!!! ATAATTTGCTACCTCTTTTG+CGG - chr3.2:74478538-74478557 None:intergenic 30.0%
!!! ATTATTTTTACCCTGTTTGC+TGG - chr3.2:74477366-74477385 None:intergenic 30.0%
!!! ATTTTGGCTATATATCAGGA+AGG + chr3.2:74478679-74478698 MS.gene052207:intron 30.0%
!!! CTCGTTATTTTTTCCGATTA+TGG + chr3.2:74477390-74477409 MS.gene052207:intron 30.0%
!!! GTTTCTGTCTCAATTTTTTG+TGG - chr3.2:74476134-74476153 None:intergenic 30.0%
AAAATAAAAGAGCCCGACAA+TGG + chr3.2:74480247-74480266 MS.gene052207:CDS 35.0%
AATAACTCAATGGATGAGAC+AGG - chr3.2:74477625-74477644 None:intergenic 35.0%
AATTCCCATAAGCTCATGAT+TGG + chr3.2:74478064-74478083 MS.gene052207:intron 35.0%
ACATTTCCAAAATGCATCTC+TGG - chr3.2:74476547-74476566 None:intergenic 35.0%
AGAATTTATCAACACTGCCA+TGG + chr3.2:74479136-74479155 MS.gene052207:CDS 35.0%
AGGTTACCTGTATTTCCATA+AGG + chr3.2:74478855-74478874 MS.gene052207:CDS 35.0%
ATAAAAATCTCGTCTGCTCA+AGG - chr3.2:74478631-74478650 None:intergenic 35.0%
ATCCATGTGCTATGCAATTA+AGG - chr3.2:74476905-74476924 None:intergenic 35.0%
CAAAGACAGCAAAGTTTAAC+AGG - chr3.2:74477494-74477513 None:intergenic 35.0%
CAAATCATTGGGAGTGAAAA+TGG + chr3.2:74478798-74478817 MS.gene052207:CDS 35.0%
CAATAAATCAACTTCGGCTT+GGG + chr3.2:74479082-74479101 MS.gene052207:CDS 35.0%
CAATGTTCAATCAACAATGC+AGG - chr3.2:74479270-74479289 None:intergenic 35.0%
CAGTTACATACTTTCTGCAT+TGG + chr3.2:74478379-74478398 MS.gene052207:CDS 35.0%
CTATAGGCTGTCTTATGATT+GGG + chr3.2:74479241-74479260 MS.gene052207:intron 35.0%
GAGAGCCAATAAATCAACTT+CGG + chr3.2:74479076-74479095 MS.gene052207:CDS 35.0%
GAGTGTTATGTCATAACTAG+AGG + chr3.2:74477982-74478001 MS.gene052207:intron 35.0%
GCATATATATTCCAGCAAAC+AGG + chr3.2:74477352-74477371 MS.gene052207:CDS 35.0%
GCTGATTACTATGTTCTAGT+TGG + chr3.2:74478095-74478114 MS.gene052207:intron 35.0%
GGTTCAGATGAAATATTTGG+AGG + chr3.2:74478835-74478854 MS.gene052207:CDS 35.0%
GTCTTGTCATAGTTGTAAAG+AGG - chr3.2:74475967-74475986 None:intergenic 35.0%
GTTATACTGTGATATCATGC+AGG + chr3.2:74478225-74478244 MS.gene052207:intron 35.0%
GTTCTATGGCATTAGGTTAA+TGG + chr3.2:74476096-74476115 MS.gene052207:intron 35.0%
TCCATGTGCTATGCAATTAA+GGG - chr3.2:74476904-74476923 None:intergenic 35.0%
TCTATGGCATTAGGTTAATG+GGG + chr3.2:74476098-74476117 MS.gene052207:intron 35.0%
TCTCAAAAATTGTCCTGTAG+TGG - chr3.2:74479911-74479930 None:intergenic 35.0%
TGAGAATCCATATTTGCCAA+AGG + chr3.2:74479563-74479582 MS.gene052207:CDS 35.0%
TGGTCAAGGTTATGATGAAA+AGG - chr3.2:74479987-74480006 None:intergenic 35.0%
! AATAAATCAACTTCGGCTTG+GGG + chr3.2:74479083-74479102 MS.gene052207:CDS 35.0%
! ACTTAATTTTCCCCCATTCA+GGG + chr3.2:74478495-74478514 MS.gene052207:intron 35.0%
! GATTTTTATTGCTAGCTCGA+AGG + chr3.2:74478642-74478661 MS.gene052207:intron 35.0%
! TACAATACCATTTTCCACTC+CGG - chr3.2:74479170-74479189 None:intergenic 35.0%
! TACTTTCTGCATTGGTATAG+AGG + chr3.2:74478387-74478406 MS.gene052207:CDS 35.0%
! TTAAACTTTGCTGTCTTTGC+AGG + chr3.2:74477495-74477514 MS.gene052207:intron 35.0%
! TTCCTCTACATTAGAAGCAT+CGG - chr3.2:74477047-74477066 None:intergenic 35.0%
!! AAGTTGATTTATTGGCTCTC+AGG - chr3.2:74479076-74479095 None:intergenic 35.0%
!! ACAGCTCATTTTAACCATGA+GGG - chr3.2:74478424-74478443 None:intergenic 35.0%
!! AGAAGAGTTTGTTGATATGC+TGG + chr3.2:74476308-74476327 MS.gene052207:CDS 35.0%
!! AGTTTGTTGATATGCTGGAT+GGG + chr3.2:74476313-74476332 MS.gene052207:CDS 35.0%
!! GAGGATGCTTTAAAATTCCA+GGG - chr3.2:74477922-74477941 None:intergenic 35.0%
!! GTTTTCAGGGTAAACAAAGT+TGG - chr3.2:74479865-74479884 None:intergenic 35.0%
!! TACAGCTCATTTTAACCATG+AGG - chr3.2:74478425-74478444 None:intergenic 35.0%
!! TGAGGATGCTTTAAAATTCC+AGG - chr3.2:74477923-74477942 None:intergenic 35.0%
AAACACTCCTACCACAAAAG+AGG + chr3.2:74479881-74479900 MS.gene052207:CDS 40.0%
AACACTCCTACCACAAAAGA+GGG + chr3.2:74479882-74479901 MS.gene052207:CDS 40.0%
ACCCTTAATTGCATAGCACA+TGG + chr3.2:74476900-74476919 MS.gene052207:intron 40.0%
AGAACCAGTGCTGTCAATTA+TGG - chr3.2:74477856-74477875 None:intergenic 40.0%
AGCACCCTGTTGAAATGAAA+TGG - chr3.2:74480077-74480096 None:intergenic 40.0%
AGGCACTAAGTTGCATTTCA+TGG - chr3.2:74478026-74478045 None:intergenic 40.0%
ATAACAACACCAAGCAGAAC+TGG - chr3.2:74477671-74477690 None:intergenic 40.0%
ATCAACACGCTATGATCCAA+CGG + chr3.2:74477566-74477585 MS.gene052207:CDS 40.0%
ATGATGACTGATGTACCCTT+TGG + chr3.2:74478262-74478281 MS.gene052207:CDS 40.0%
ATGGTTCATGCTTAGTCAAG+TGG - chr3.2:74480058-74480077 None:intergenic 40.0%
CATTCCATAATTGACAGCAC+TGG + chr3.2:74477849-74477868 MS.gene052207:intron 40.0%
CCAATAAATCAACTTCGGCT+TGG + chr3.2:74479081-74479100 MS.gene052207:CDS 40.0%
CGAACTTCATTTCACAGTTC+AGG + chr3.2:74478575-74478594 MS.gene052207:CDS 40.0%
GAACTGTGAAATGAAGTTCG+TGG - chr3.2:74478575-74478594 None:intergenic 40.0%
GATACGTACGGTGACAATAA+CGG - chr3.2:74475989-74476008 None:intergenic 40.0%
GCTATAGGCTGTCTTATGAT+TGG + chr3.2:74479240-74479259 MS.gene052207:intron 40.0%
GGGGATAAGCACAAGAATTA+TGG - chr3.2:74478930-74478949 None:intergenic 40.0%
GTGCTGTCAATTATGGAATG+CGG - chr3.2:74477849-74477868 None:intergenic 40.0%
TAATGCCTGTGTATGCTAGA+GGG - chr3.2:74477123-74477142 None:intergenic 40.0%
TACTGCAAAAGCTGTGGAAT+GGG + chr3.2:74480138-74480157 MS.gene052207:CDS 40.0%
TCATGCTTAGTCAAGTGGTT+TGG - chr3.2:74480053-74480072 None:intergenic 40.0%
TCTTTGCAGGAGGATTAAGA+AGG + chr3.2:74477508-74477527 MS.gene052207:intron 40.0%
TGATGAAGCTCTTCCTTGTT+AGG - chr3.2:74478883-74478902 None:intergenic 40.0%
TGCAGTGGCCAATAGATATT+TGG + chr3.2:74478324-74478343 MS.gene052207:CDS 40.0%
TGCTTGTTCGTATGTCTTGA+AGG + chr3.2:74479611-74479630 MS.gene052207:intron 40.0%
TGGCATTACCCCTCTTTATT+TGG + chr3.2:74476398-74476417 MS.gene052207:CDS 40.0%
TTAATGCCTGTGTATGCTAG+AGG - chr3.2:74477124-74477143 None:intergenic 40.0%
TTAGAATGTCCAGTTCTGCT+TGG + chr3.2:74477659-74477678 MS.gene052207:intron 40.0%
TTGCTGGAATATATATGCCC+TGG - chr3.2:74477350-74477369 None:intergenic 40.0%
! AAAATGGTTCTGTCTGGAGA+AGG + chr3.2:74478814-74478833 MS.gene052207:CDS 40.0%
! AGACTATTTTCAACTCTCCC+TGG + chr3.2:74477902-74477921 MS.gene052207:intron 40.0%
! CAGTTGGATTGATGGTTTGA+AGG + chr3.2:74479715-74479734 MS.gene052207:CDS 40.0%
! CCAAGCCGAAGTTGATTTAT+TGG - chr3.2:74479084-74479103 None:intergenic 40.0%
! CCAATTCCAGAGATGCATTT+TGG + chr3.2:74476538-74476557 MS.gene052207:intron 40.0%
! GACTTAATTTTCCCCCATTC+AGG + chr3.2:74478494-74478513 MS.gene052207:intron 40.0%
! GGCATTACCCCTCTTTATTT+GGG + chr3.2:74476399-74476418 MS.gene052207:CDS 40.0%
! TACCCCTCTTTATTTGGGTT+GGG + chr3.2:74476404-74476423 MS.gene052207:CDS 40.0%
! TTACCCCTCTTTATTTGGGT+TGG + chr3.2:74476403-74476422 MS.gene052207:CDS 40.0%
! TTCGGCAGTTGCATGATTTT+AGG + chr3.2:74477153-74477172 MS.gene052207:intron 40.0%
!! CCAAAATGCATCTCTGGAAT+TGG - chr3.2:74476541-74476560 None:intergenic 40.0%
!! GAGTTTGTTGATATGCTGGA+TGG + chr3.2:74476312-74476331 MS.gene052207:CDS 40.0%
!! TCATCAACGTCTTGCTATTG+TGG + chr3.2:74475921-74475940 MS.gene052207:CDS 40.0%
!! TGCTTGGTGTTGTTATGTAG+TGG + chr3.2:74477675-74477694 MS.gene052207:intron 40.0%
!!! TTGTGGTAGGAGTGTTTTCA+GGG - chr3.2:74479878-74479897 None:intergenic 40.0%
!!! TTTGTGGTAGGAGTGTTTTC+AGG - chr3.2:74479879-74479898 None:intergenic 40.0%
AATGCCTGTGTATGCTAGAG+GGG - chr3.2:74477122-74477141 None:intergenic 45.0%
AGCATAAGAGGCTGAGCTAT+AGG + chr3.2:74479225-74479244 MS.gene052207:intron 45.0%
ATCTCGTCATGCAGCATAAG+AGG + chr3.2:74479213-74479232 MS.gene052207:intron 45.0%
ATGCAGTACTGCAAAAGCTG+TGG + chr3.2:74480132-74480151 MS.gene052207:CDS 45.0%
ATTGCTGCTCGTGATGCTAT+TGG + chr3.2:74476378-74476397 MS.gene052207:CDS 45.0%
CAAAAGAGGGATACCACTAC+AGG + chr3.2:74479895-74479914 MS.gene052207:CDS 45.0%
CAATGCAAACCACTCCAATC+AGG - chr3.2:74475880-74475899 None:intergenic 45.0%
CAGGTTAGAGCCTACTTGTT+CGG - chr3.2:74479750-74479769 None:intergenic 45.0%
CGAATTCCGCTACAAAACAG+TGG - chr3.2:74477810-74477829 None:intergenic 45.0%
CGATTTAACCTCAACCTCGT+TGG + chr3.2:74476471-74476490 MS.gene052207:intron 45.0%
CTCGTCTGCTCAAGGTAAAA+TGG - chr3.2:74478623-74478642 None:intergenic 45.0%
CTGGAATATATATGCCCTGG+AGG - chr3.2:74477347-74477366 None:intergenic 45.0%
CTGTGAAATGAAGTTCGTGG+TGG - chr3.2:74478572-74478591 None:intergenic 45.0%
GATCATGCTACCGAACAAGT+AGG + chr3.2:74479737-74479756 MS.gene052207:intron 45.0%
GCACATATTGTACAGGCAGA+AGG + chr3.2:74479667-74479686 MS.gene052207:intron 45.0%
GGAATAGCTAACCCTCTCAA+AGG - chr3.2:74477604-74477623 None:intergenic 45.0%
GTACTGCAAAAGCTGTGGAA+TGG + chr3.2:74480137-74480156 MS.gene052207:CDS 45.0%
GTCGGATACAGTTGGATTGA+TGG + chr3.2:74479707-74479726 MS.gene052207:CDS 45.0%
GTTGGATCATAGCGTGTTGA+TGG - chr3.2:74477567-74477586 None:intergenic 45.0%
TAGGCGCCTTATGGAAATAC+AGG - chr3.2:74478864-74478883 None:intergenic 45.0%
TATCGATCCGGAGTGGAAAA+TGG + chr3.2:74479160-74479179 MS.gene052207:CDS 45.0%
TCCAAAAATCTGGACCCTTC+AGG + chr3.2:74480172-74480191 MS.gene052207:CDS 45.0%
TGCAGCATGGTCCAAAAATC+TGG + chr3.2:74480162-74480181 MS.gene052207:CDS 45.0%
TGCCGATGCTTCTAATGTAG+AGG + chr3.2:74477042-74477061 MS.gene052207:intron 45.0%
TGCGGAATCTTAGCAGTGTT+GGG + chr3.2:74475784-74475803 MS.gene052207:CDS 45.0%
TGTTCATGCAGCTGCATACA+AGG + chr3.2:74480210-74480229 MS.gene052207:CDS 45.0%
TTGCAGGAGGATTAAGAAGG+TGG + chr3.2:74477511-74477530 MS.gene052207:intron 45.0%
! AACTTTGCTGTCTTTGCAGG+AGG + chr3.2:74477498-74477517 MS.gene052207:intron 45.0%
! AATCTTAGCAGTGTTGGGTG+TGG + chr3.2:74475789-74475808 MS.gene052207:CDS 45.0%
! ACCTGAAGGGTCCAGATTTT+TGG - chr3.2:74480176-74480195 None:intergenic 45.0%
! AGAGGTTGATCTCCAGAAGT+AGG - chr3.2:74475949-74475968 None:intergenic 45.0%
! GAGGTTGATCTCCAGAAGTA+GGG - chr3.2:74475948-74475967 None:intergenic 45.0%
! GCTATGCCACTGTTTTGTAG+CGG + chr3.2:74477801-74477820 MS.gene052207:intron 45.0%
! GGAAGGTATAGATGCACTTG+AGG + chr3.2:74478696-74478715 MS.gene052207:intron 45.0%
! GGAGTGAAAATGGTTCTGTC+TGG + chr3.2:74478808-74478827 MS.gene052207:CDS 45.0%
! GTAGTGGTATCCCTCTTTTG+TGG - chr3.2:74479895-74479914 None:intergenic 45.0%
! TCTGCATTGGTATAGAGGTC+TGG + chr3.2:74478392-74478411 MS.gene052207:intron 45.0%
! TCTTTTGCGGCTCTCAAATC+CGG - chr3.2:74478525-74478544 None:intergenic 45.0%
! TGATCCAACGGTTTTGCATG+AGG + chr3.2:74477578-74477597 MS.gene052207:CDS 45.0%
! TGGTATCCCTCTTTTGTGGT+AGG - chr3.2:74479891-74479910 None:intergenic 45.0%
! TTTCCATAAGGCGCCTAACA+AGG + chr3.2:74478867-74478886 MS.gene052207:CDS 45.0%
! TTTGCATGAGGCCTTTGAGA+GGG + chr3.2:74477590-74477609 MS.gene052207:CDS 45.0%
! TTTTGCATGAGGCCTTTGAG+AGG + chr3.2:74477589-74477608 MS.gene052207:CDS 45.0%
!! ACCCCTCTTTATTTGGGTTG+GGG + chr3.2:74476405-74476424 MS.gene052207:CDS 45.0%
!! ATTTGCTCTGAGAACCATGG+TGG - chr3.2:74477543-74477562 None:intergenic 45.0%
!! GGAAGGGCTGATTATTTTGC+AGG + chr3.2:74477257-74477276 MS.gene052207:intron 45.0%
!! GGAATTTGCTCTGAGAACCA+TGG - chr3.2:74477546-74477565 None:intergenic 45.0%
!! ATAATAATTACATAAAAATA+TGG - chr3.2:74478951-74478970 None:intergenic 5.0%
!! ATTTATTCAAAAAAAAAAAA+AGG - chr3.2:74476869-74476888 None:intergenic 5.0%
!! TAATAATTACATAAAAATAT+GGG - chr3.2:74478950-74478969 None:intergenic 5.0%
!! TTTATTCAAAAAAAAAAAAA+GGG - chr3.2:74476868-74476887 None:intergenic 5.0%
AAATCCGGAGAGCCCTGAAT+GGG - chr3.2:74478510-74478529 None:intergenic 50.0%
AAGGCCTCATGCAAAACCGT+TGG - chr3.2:74477585-74477604 None:intergenic 50.0%
AGGTCTGGACTATTCCCTCA+TGG + chr3.2:74478407-74478426 MS.gene052207:intron 50.0%
ATGCCTGTGTATGCTAGAGG+GGG - chr3.2:74477121-74477140 None:intergenic 50.0%
CACTGCCATGGATATCGATC+CGG + chr3.2:74479148-74479167 MS.gene052207:CDS 50.0%
CAGAAGGAACAGTTCAGCGA+TGG + chr3.2:74479683-74479702 MS.gene052207:CDS 50.0%
CAGTACTGCATGCCACACTA+GGG - chr3.2:74480123-74480142 None:intergenic 50.0%
CATAGAGGACCTGATTGGAG+TGG + chr3.2:74475868-74475887 MS.gene052207:CDS 50.0%
CCGGACAACAGAACACCAAA+GGG - chr3.2:74478280-74478299 None:intergenic 50.0%
CTGTGATATCATGCAGGCTG+TGG + chr3.2:74478231-74478250 MS.gene052207:intron 50.0%
CTTAGACACCAACGAGGTTG+AGG - chr3.2:74476482-74476501 None:intergenic 50.0%
CTTCCTTGTTAGGCGCCTTA+TGG - chr3.2:74478873-74478892 None:intergenic 50.0%
GAACAGTTCAGCGATGGTGT+CGG + chr3.2:74479689-74479708 MS.gene052207:CDS 50.0%
GAAGGTGGTACAATCCACCA+TGG + chr3.2:74477526-74477545 MS.gene052207:CDS 50.0%
GCATCATCGAATTGTCTCGC+AGG + chr3.2:74475839-74475858 MS.gene052207:CDS 50.0%
GCCCCAACCCAAATAAAGAG+GGG - chr3.2:74476409-74476428 None:intergenic 50.0%
GCTATTGTGGACCCTACTTC+TGG + chr3.2:74475934-74475953 MS.gene052207:CDS 50.0%
GGATTTGAGAGCCGCAAAAG+AGG + chr3.2:74478524-74478543 MS.gene052207:CDS 50.0%
GGCCCCAACCCAAATAAAGA+GGG - chr3.2:74476410-74476429 None:intergenic 50.0%
GTAACTGTGATCCCCACTGA+CGG - chr3.2:74478366-74478385 None:intergenic 50.0%
GTGCGGAATCTTAGCAGTGT+TGG + chr3.2:74475783-74475802 MS.gene052207:CDS 50.0%
TAACTGTGATCCCCACTGAC+GGG - chr3.2:74478365-74478384 None:intergenic 50.0%
TCCGGACAACAGAACACCAA+AGG - chr3.2:74478281-74478300 None:intergenic 50.0%
TGCGACATAGAGGACCTGAT+TGG + chr3.2:74475863-74475882 MS.gene052207:CDS 50.0%
TGGCCCCAACCCAAATAAAG+AGG - chr3.2:74476411-74476430 None:intergenic 50.0%
! TAGCAAGACGTTGATGAGCG+AGG - chr3.2:74475918-74475937 None:intergenic 50.0%
!! AACTTCGGCTTGGGGTATAG+AGG + chr3.2:74479091-74479110 MS.gene052207:CDS 50.0%
!! CCCTTTGGTGTTCTGTTGTC+CGG + chr3.2:74478277-74478296 MS.gene052207:CDS 50.0%
!! TATTTGGGTTGGGGCCATGA+TGG + chr3.2:74476414-74476433 MS.gene052207:CDS 50.0%
!! TTTGGTGTTCTGTTGTCCGG+AGG + chr3.2:74478280-74478299 MS.gene052207:CDS 50.0%
AAGTGACGAGTCCAGTCCTC+CGG - chr3.2:74478299-74478318 None:intergenic 55.0%
AATCCGGAGAGCCCTGAATG+GGG - chr3.2:74478509-74478528 None:intergenic 55.0%
AGCTGCATGAACACCAAGCG+CGG - chr3.2:74480203-74480222 None:intergenic 55.0%
CAAATCCGGAGAGCCCTGAA+TGG - chr3.2:74478511-74478530 None:intergenic 55.0%
CCACTCCGGATCGATATCCA+TGG - chr3.2:74479156-74479175 None:intergenic 55.0%
CCATGGATATCGATCCGGAG+TGG + chr3.2:74479153-74479172 MS.gene052207:CDS 55.0%
CTGTGGAATGGGATGCAGCA+TGG + chr3.2:74480149-74480168 MS.gene052207:CDS 55.0%
GAGTGGCTTAGACACCAACG+AGG - chr3.2:74476488-74476507 None:intergenic 55.0%
GCAGTACTGCATGCCACACT+AGG - chr3.2:74480124-74480143 None:intergenic 55.0%
GTTGGGGCCATGATGGTATG+TGG + chr3.2:74476421-74476440 MS.gene052207:intron 55.0%
TCAGCATTGCGTCTGTGACC+TGG - chr3.2:74479836-74479855 None:intergenic 55.0%
TCTCGCAGGTTGCGACATAG+AGG + chr3.2:74475853-74475872 MS.gene052207:CDS 55.0%
TGCCTGTGTATGCTAGAGGG+GGG - chr3.2:74477120-74477139 None:intergenic 55.0%
TGTTCTGTTGTCCGGAGGAC+TGG + chr3.2:74478285-74478304 MS.gene052207:CDS 55.0%
TTCGATGATGCGAGCGCGTT+TGG - chr3.2:74475830-74475849 None:intergenic 55.0%
! AGAGGCACGTGTACCGTTCT+TGG + chr3.2:74479109-74479128 MS.gene052207:CDS 55.0%
! CTCGTCACTTGTTGCTGCAG+TGG + chr3.2:74478309-74478328 MS.gene052207:CDS 55.0%
! GCGATGGTGTCGGATACAGT+TGG + chr3.2:74479699-74479718 MS.gene052207:CDS 55.0%
!! CATTTCAACAGGGTGCTGCC+AGG + chr3.2:74480080-74480099 MS.gene052207:intron 55.0%
AGTTCCAGGAGGCCCTAGTG+TGG + chr3.2:74480108-74480127 MS.gene052207:CDS 60.0%
ATACTGACGCTGCCCGTCAG+TGG + chr3.2:74478350-74478369 MS.gene052207:CDS 60.0%
ATCCGGAGAGCCCTGAATGG+GGG - chr3.2:74478508-74478527 None:intergenic 60.0%
GCCAGGTCAACAGTTCCAGG+AGG + chr3.2:74480097-74480116 MS.gene052207:CDS 60.0%
GCCTCCTGGAACTGTTGACC+TGG - chr3.2:74480101-74480120 None:intergenic 60.0%
GCCTGTGTATGCTAGAGGGG+GGG - chr3.2:74477119-74477138 None:intergenic 60.0%
GCGGCAGCCACATACCATCA+TGG - chr3.2:74476431-74476450 None:intergenic 60.0%
GCTGCCAGGTCAACAGTTCC+AGG + chr3.2:74480094-74480113 MS.gene052207:CDS 60.0%
TACTGACGCTGCCCGTCAGT+GGG + chr3.2:74478351-74478370 MS.gene052207:CDS 60.0%
TCCCCCCCTCTAGCATACAC+AGG + chr3.2:74477115-74477134 MS.gene052207:intron 60.0%
TTCCCCCATTCAGGGCTCTC+CGG + chr3.2:74478503-74478522 MS.gene052207:intron 60.0%
ACTGACGCTGCCCGTCAGTG+GGG + chr3.2:74478352-74478371 MS.gene052207:CDS 65.0%
CAAGCGCGGCACGACCTGAA+GGG - chr3.2:74480189-74480208 None:intergenic 65.0%
CATGCCACACTAGGGCCTCC+TGG - chr3.2:74480115-74480134 None:intergenic 65.0%
CCAAGCGCGGCACGACCTGA+AGG - chr3.2:74480190-74480209 None:intergenic 70.0%
CCTTCAGGTCGTGCCGCGCT+TGG + chr3.2:74480187-74480206 MS.gene052207:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 74475781 74480279 74475781 ID=MS.gene052207
chr3.2 mRNA 74475781 74480279 74475781 ID=MS.gene052207.t1;Parent=MS.gene052207
chr3.2 exon 74475781 74475999 74475781 ID=MS.gene052207.t1.exon1;Parent=MS.gene052207.t1
chr3.2 CDS 74475781 74475999 74475781 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74476111 74476206 74476111 ID=MS.gene052207.t1.exon2;Parent=MS.gene052207.t1
chr3.2 CDS 74476111 74476206 74476111 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74476294 74476435 74476294 ID=MS.gene052207.t1.exon3;Parent=MS.gene052207.t1
chr3.2 CDS 74476294 74476435 74476294 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74477279 74477374 74477279 ID=MS.gene052207.t1.exon4;Parent=MS.gene052207.t1
chr3.2 CDS 74477279 74477374 74477279 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74477517 74477611 74477517 ID=MS.gene052207.t1.exon5;Parent=MS.gene052207.t1
chr3.2 CDS 74477517 74477611 74477517 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74478247 74478408 74478247 ID=MS.gene052207.t1.exon6;Parent=MS.gene052207.t1
chr3.2 CDS 74478247 74478408 74478247 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74478516 74478596 74478516 ID=MS.gene052207.t1.exon7;Parent=MS.gene052207.t1
chr3.2 CDS 74478516 74478596 74478516 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74478697 74478918 74478697 ID=MS.gene052207.t1.exon8;Parent=MS.gene052207.t1
chr3.2 CDS 74478697 74478918 74478697 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74479047 74479181 74479047 ID=MS.gene052207.t1.exon9;Parent=MS.gene052207.t1
chr3.2 CDS 74479047 74479181 74479047 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74479504 74479584 74479504 ID=MS.gene052207.t1.exon10;Parent=MS.gene052207.t1
chr3.2 CDS 74479504 74479584 74479504 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74479668 74479754 74479668 ID=MS.gene052207.t1.exon11;Parent=MS.gene052207.t1
chr3.2 CDS 74479668 74479754 74479668 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74479837 74479944 74479837 ID=MS.gene052207.t1.exon12;Parent=MS.gene052207.t1
chr3.2 CDS 74479837 74479944 74479837 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
chr3.2 exon 74480091 74480279 74480091 ID=MS.gene052207.t1.exon13;Parent=MS.gene052207.t1
chr3.2 CDS 74480091 74480279 74480091 ID=cds.MS.gene052207.t1;Parent=MS.gene052207.t1
Gene Sequence

>MS.gene052207

ATGTGCGGAATCTTAGCAGTGTTGGGTGTGGTCGACAATTCTCAGTCCAAACGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGACATAGAGGACCTGATTGGAGTGGTTTGCATTGTCATCAAGATTGTTACCTCGCTCATCAACGTCTTGCTATTGTGGACCCTACTTCTGGAGATCAACCTCTTTACAACTATGACAAGACCGTTATTGTCACCGTACGTATCTTATCTTCTATCTAATCTGCACGTTTTTTTTTTTTTATTACATTGTTTATAATTTGCATGCAGAATTTTGATTTTGTCACATTTTCTGTTCTATGGCATTAGGTTAATGGGGAGATATACAACCACAAAAAATTGAGACAGAAACTGAAATCTCATCAATTTCGAACTGGTAGTGATTGTGAAGTCATTGCTCATCTTGTAAGTGTTTTCTAGAAGGATTATGTTTATTTTACTGTTTTTCATATTATTATGACGAATGATGACTAACTATTTCGATGTGATTAGTATGAAGAATATGGAGAAGAGTTTGTTGATATGCTGGATGGGATGTTCTCATTTGTGCTTCTTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTATTTGGGTTGGGGCCATGATGGTATGTGGCTGCCGCTTCTTATTGTAACATTTTTACGATTTAACCTCAACCTCGTTGGTGTCTAAGCCACTCGAATTGAACCATTTATTGTGCAATTTAAAGCCAATTCCAGAGATGCATTTTGGAAATGTAGTGTGCTAAATTGCTAAACTGAAGTGAATTTTATTTGTATAGATTGCCTGTGTAATTTTTTTAAACTGTTAACCCAATTGTGATTGTCAGATGATTAAAAACATTTGACTTTCATAACTAATTTCAAAGTCATACATTTAATTGGCAGTGATTTGTTGACAGTGTAAAACTTTTTACATTGAAATTGAAATAAATCATTAATGTATGAGTTCCTATATAAAATTTGTAGCTTCAAATCAATGTATTTTTGTCGTATGTTTTGTAGTATTAGACTATTAGTAAACTTGATGTTGTTTACCCTTTTTTTTTTTTTGAATAAATTGATGTTGTTTACCCTTAATTGCATAGCACATGGATTTTTATAACTCAAGTGAATGTACTAAAGATTGAAAGTAAAATACTAATTTCTTACTAAATTATGAATGATATCCTGCTACATATCTTTATAAACATTAAGGATGACTTTGTTATATCTGCCGATGCTTCTAATGTAGAGGAACATGTCCTAGTTTTTTCAAGGAAATGTAATGAAGCATCTCTTTATCTCTCCCCCCCTCTAGCATACACAGGCATTAATCTTTTACATTCGGCAGTTGCATGATTTTAGGATAGAAAATAAAGAGTTGTCTATACATTTGGTTATGTATTCGTGGTATGATTGTTGTTCTTGAATTAGATATATCATTTATGGAAGGGCTGATTATTTTGCAGGATCAATATGGTTTGCGTCTGAAATGAAAGCGCTGATTGATGATTGTGAGCAATTTATATCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGGTAAAAATAATGCAACTCGTTATTTTTTCCGATTATGGTTACTCTTGTAAACTCAATTCCATTTGTTTTTCTCCTTGTCTAAATTTTACTCCAAGATAAGATACACACTTACATATCCTGTTAAACTTTGCTGTCTTTGCAGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTCTCAGAGCAAATTCCATCAACACGCTATGATCCAACGGTTTTGCATGAGGCCTTTGAGAGGGTTAGCTATTCCTGTCTCATCCATTGAGTTATTTCATCGTTTGAACTTTAGAATGTCCAGTTCTGCTTGGTGTTGTTATGTAGTGGCTATAGCACATTAGCATAGTTGAATTTGAACAAATCACTATCGTTTCACAATACACTATCTGTCTATTTAGCACAAAATGTTGTCAAATAGCGGCAAAAGTGAGCTATGCCACTGTTTTGTAGCGGAATTCGAACAAACTGCTATTTTCCGCATTCCATAATTGACAGCACTGGTTCTACTGCATTTTCTTAAAGAACTGCTTCAGACTATTTTCAACTCTCCCTGGAATTTTAAAGCATCCTCACTTTTATTTTGTCTATAATATCATTTGCAACAAACTTAGGAGTGTTATGTCATAACTAGAGGTGTTGAAACTGAAATACACCATGAAATGCAACTTAGTGCCTTTTGAGAAATTATACGTAAATTCCCATAAGCTCATGATTGGAATTTGGAGCTGATTACTATGTTCTAGTTGGTGAAGAAAAAATAATATCATTTTTATTCTTTTCACATTTAGTGACTTCCTTTGATGTAGTTGATACTAAGTCATAACTCTACGAACATCCTTTTTAACTTTTTCTTGGTTATACTGTGATATCATGCAGGCTGTGGTTAAGAGAATGATGACTGATGTACCCTTTGGTGTTCTGTTGTCCGGAGGACTGGACTCGTCACTTGTTGCTGCAGTGGCCAATAGATATTTGGCTGATACTGACGCTGCCCGTCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTATAGAGGTCTGGACTATTCCCTCATGGTTAAAATGAGCTGTATTATACTTCTTCAGTCCATAAGTAATAGTAGTTATATGCTTCATGACATGACTTAATTTTCCCCCATTCAGGGCTCTCCGGATTTGAGAGCCGCAAAAGAGGTAGCAAATTATCTTGGCACTTGCCACCACGAACTTCATTTCACAGTTCAGGTGACGATTTCTCCCTTTATCTACCATTTTACCTTGAGCAGACGAGATTTTTATTGCTAGCTCGAAGGTAATCTAATATTCTATTTTGGCTATATATCAGGAAGGTATAGATGCACTTGAGGAAGTCATTTACCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATCAAATCATTGGGAGTGAAAATGGTTCTGTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCGCCTAACAAGGAAGAGCTTCATCAAGAAACATGCCGAAAAGTAATATACCATAATTCTTGTGCTTATCCCCATATTTTTATGTAATTATTATGTGCATCTTTATCTCTTCATTCCTGTGTACTTTTACCAGTTTATTCAAGTTTTTGGTGTCTTTGATGATTTGACAGATTAAAGCACTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCGGCTTGGGGTATAGAGGCACGTGTACCGTTCTTGGATAAAGAATTTATCAACACTGCCATGGATATCGATCCGGAGTGGAAAATGGTATTGTAACTTTACTTCTTTCTTGGTGTTCATCTCGTCATGCAGCATAAGAGGCTGAGCTATAGGCTGTCTTATGATTGGGCTGCCTGCATTGTTGATTGAACATTGAGATTATGTTAACTTGCAGTTAAATAAATTCATATGTCATTTCAACTTTCTGCTTTTGTTTAAATGTTCCAGTTTTCTTGTAAAATAAATTTGTCTGTGGACAGTTCTAAGTTTCTAACAGATCTTTGTGAAATTGAATTTACTAGTTAGTGAAGTTAATCTTATTAACTTCATTTTTTTTATCACCTCATGAAATTAACGAAAAATTGCACAGATAAAGCCTGATATTGAAAGGATAGAGAAATGGGTATTGCGCAATGCATTTGATGATGATGAGAATCCATATTTGCCAAAGGTTTGTATCAATCAACTTCTGCATTATGCTTGTTCGTATGTCTTGAAGGATTTCTGAAATAATTTTATTCTTCTATTTTTCAGCACATATTGTACAGGCAGAAGGAACAGTTCAGCGATGGTGTCGGATACAGTTGGATTGATGGTTTGAAGGATCATGCTACCGAACAAGTAGGCTCTAACCTGTGACATTGAACTGAATAACTCATTTTTATAGAATTCCATTGACATTATATACTTGATAAATGGCCAGGTCACAGACGCAATGCTGAAGCATGCCAACTTTGTTTACCCTGAAAACACTCCTACCACAAAAGAGGGATACCACTACAGGACAATTTTTGAGAAGTTATTTCCAAAGGTGAATTGTATAGTCTTTTGCATCTTAAAATAATATATACCTTTTCATCATAACCTTGACCAATTTTAAATTTGAACATGAACTTGTTTACAAATTTCGATCATGCCAAACCACTTGACTAAGCATGAACCATTTCATTTCAACAGGGTGCTGCCAGGTCAACAGTTCCAGGAGGCCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCCAAAAATCTGGACCCTTCAGGTCGTGCCGCGCTTGGTGTTCATGCAGCTGCATACAAGGATGCAGTAGATATCAAAATAAAAGAGCCCGACAATGGATCCCTCTAA
Protein sequence

>MS.gene052207.t1

MCGILAVLGVVDNSQSKRARIIELSRRLRHRGPDWSGLHCHQDCYLAHQRLAIVDPTSGDQPLYNYDKTVIVTVNGEIYNHKKLRQKLKSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALIDDCEQFISFPPGHIYSSKQGGLRRWYNPPWFSEQIPSTRYDPTVLHEAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLADTDAARQWGSQLHTFCIGIEGSPDLRAAKEVANYLGTCHHELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHQETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMDIDPEWKMIKPDIERIEKWVLRNAFDDDENPYLPKHILYRQKEQFSDGVGYSWIDGLKDHATEQVTDAMLKHANFVYPENTPTTKEGYHYRTIFEKLFPKGAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHAAAYKDAVDIKIKEPDNGSL