Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59447.t1 | XP_003599919.1 | 92.9 | 537 | 35 | 1 | 1 | 534 | 1 | 537 | 2.60E-277 | 964.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59447.t1 | E0CTY1 | 72.7 | 546 | 132 | 4 | 3 | 533 | 1 | 544 | 5.2e-218 | 758.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59447.t1 | G7IZY8 | 92.9 | 537 | 35 | 1 | 1 | 534 | 1 | 537 | 1.9e-277 | 964.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene59447 | MS.gene064795 | PPI |
MS.gene59447 | MS.gene69362 | PPI |
MS.gene59447 | MS.gene53517 | PPI |
MS.gene59447 | MS.gene073888 | PPI |
MS.gene59447 | MS.gene053443 | PPI |
MS.gene59447 | MS.gene52807 | PPI |
MS.gene59447 | MS.gene014383 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59447.t1 | MTR_3g048950 | 95.158 | 537 | 23 | 1 | 1 | 534 | 1 | 537 | 0.0 | 1012 |
MS.gene59447.t1 | MTR_2g010180 | 32.805 | 442 | 258 | 9 | 87 | 519 | 179 | 590 | 2.77e-48 | 177 |
MS.gene59447.t1 | MTR_2g010180 | 32.727 | 440 | 257 | 9 | 87 | 517 | 179 | 588 | 3.27e-48 | 176 |
MS.gene59447.t1 | MTR_2g010180 | 32.727 | 440 | 257 | 9 | 87 | 517 | 193 | 602 | 3.68e-48 | 177 |
MS.gene59447.t1 | MTR_3g096980 | 30.603 | 464 | 266 | 12 | 75 | 523 | 174 | 596 | 1.41e-46 | 172 |
MS.gene59447.t1 | MTR_8g094740 | 30.635 | 457 | 262 | 12 | 82 | 523 | 181 | 597 | 2.39e-42 | 160 |
MS.gene59447.t1 | MTR_8g080890 | 31.935 | 310 | 201 | 6 | 18 | 321 | 21 | 326 | 5.35e-35 | 138 |
MS.gene59447.t1 | MTR_8g094740 | 30.612 | 392 | 231 | 9 | 82 | 469 | 181 | 535 | 2.51e-34 | 136 |
MS.gene59447.t1 | MTR_4g074030 | 27.525 | 505 | 333 | 13 | 34 | 529 | 29 | 509 | 6.11e-33 | 132 |
MS.gene59447.t1 | MTR_8g080840 | 27.169 | 438 | 256 | 9 | 5 | 398 | 22 | 440 | 6.83e-33 | 132 |
MS.gene59447.t1 | MTR_8g080870 | 34.074 | 270 | 167 | 5 | 43 | 305 | 15 | 280 | 2.03e-32 | 130 |
MS.gene59447.t1 | MTR_8g097220 | 30.225 | 311 | 202 | 6 | 17 | 321 | 21 | 322 | 9.46e-32 | 129 |
MS.gene59447.t1 | MTR_8g080880 | 32.168 | 286 | 183 | 5 | 43 | 321 | 44 | 325 | 3.75e-31 | 127 |
MS.gene59447.t1 | MTR_8g095600 | 31.020 | 245 | 153 | 4 | 40 | 279 | 163 | 396 | 4.32e-29 | 120 |
MS.gene59447.t1 | MTR_8g095600 | 31.020 | 245 | 153 | 4 | 40 | 279 | 163 | 396 | 1.26e-28 | 120 |
MS.gene59447.t1 | MTR_8g095600 | 31.020 | 245 | 153 | 4 | 40 | 279 | 163 | 396 | 1.48e-28 | 120 |
MS.gene59447.t1 | MTR_8g095600 | 31.020 | 245 | 153 | 4 | 40 | 279 | 179 | 412 | 1.55e-28 | 120 |
MS.gene59447.t1 | MTR_1g082750 | 46.429 | 112 | 60 | 0 | 138 | 249 | 63 | 174 | 2.31e-22 | 100 |
MS.gene59447.t1 | MTR_4g094205 | 46.602 | 103 | 55 | 0 | 148 | 250 | 119 | 221 | 1.86e-19 | 92.4 |
MS.gene59447.t1 | MTR_8g107280 | 41.441 | 111 | 65 | 0 | 140 | 250 | 101 | 211 | 5.41e-12 | 68.6 |
MS.gene59447.t1 | MTR_8g107280 | 41.441 | 111 | 65 | 0 | 140 | 250 | 101 | 211 | 5.91e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59447.t1 | AT3G25660 | 73.184 | 537 | 134 | 3 | 3 | 531 | 1 | 535 | 0.0 | 769 |
MS.gene59447.t1 | AT5G64440 | 29.158 | 487 | 295 | 12 | 45 | 517 | 139 | 589 | 1.27e-46 | 172 |
MS.gene59447.t1 | AT4G34880 | 27.447 | 521 | 314 | 16 | 17 | 517 | 24 | 500 | 3.81e-28 | 118 |
MS.gene59447.t1 | AT5G07360 | 29.699 | 266 | 172 | 4 | 15 | 275 | 181 | 436 | 2.03e-27 | 117 |
MS.gene59447.t1 | AT5G07360 | 29.699 | 266 | 172 | 4 | 15 | 275 | 181 | 436 | 2.03e-27 | 117 |
MS.gene59447.t1 | AT5G07360 | 29.699 | 266 | 165 | 5 | 15 | 275 | 181 | 429 | 8.60e-26 | 112 |
MS.gene59447.t1 | AT1G08980 | 45.299 | 117 | 64 | 0 | 138 | 254 | 64 | 180 | 1.16e-21 | 97.8 |
MS.gene59447.t1 | AT5G09420 | 32.536 | 209 | 133 | 4 | 104 | 310 | 71 | 273 | 8.42e-19 | 90.1 |
MS.gene59447.t1 | AT4G34880 | 23.883 | 515 | 294 | 17 | 17 | 517 | 24 | 454 | 5.83e-18 | 87.0 |
MS.gene59447.t1 | AT3G17970 | 41.905 | 105 | 61 | 0 | 146 | 250 | 102 | 206 | 1.04e-15 | 80.5 |
MS.gene59447.t1 | AT3G17970 | 41.905 | 105 | 61 | 0 | 146 | 250 | 102 | 206 | 1.13e-15 | 80.5 |
Find 186 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGGAAATTGGTCCTCTTTC+TGG | 0.096442 | 5.4:+13327464 | MS.gene59447:CDS |
CATTATAAGGAATAGCTTTA+AGG | 0.196302 | 5.4:+13331166 | MS.gene59447:CDS |
CCTTCAGCTGCTTATAAAAT+TGG | 0.204129 | 5.4:+13331230 | MS.gene59447:CDS |
CTTGATGCCATTGGCTGCTT+TGG | 0.241283 | 5.4:+13329665 | MS.gene59447:CDS |
GGTTCATCGGTCGCTGATGC+TGG | 0.256956 | 5.4:+13329686 | MS.gene59447:CDS |
CCAACCCGTGGGATGTTTCC+AGG | 0.279284 | 5.4:+13329462 | MS.gene59447:CDS |
CTTAAAGCTATTCCTTATAA+TGG | 0.283232 | 5.4:-13331165 | None:intergenic |
CCCTTGAAAGGTCTGAGAAT+TGG | 0.291377 | 5.4:+13330030 | MS.gene59447:CDS |
TGGTGTTCTTGTTGCTGTTA+AGG | 0.329457 | 5.4:+13327484 | MS.gene59447:CDS |
CCTGTTGGCCTGCAAATGAT+TGG | 0.334314 | 5.4:+13332206 | MS.gene59447:CDS |
TATGGACGTGTCTCAAGATT+TGG | 0.338893 | 5.4:+13329620 | MS.gene59447:CDS |
TGTCTCGCTATGATGGTATT+AGG | 0.343270 | 5.4:+13330359 | MS.gene59447:CDS |
CCATGTGGATTTATTGAGAA+TGG | 0.359058 | 5.4:+13332170 | MS.gene59447:CDS |
CATTGGCTGCTTTGGTTCAT+CGG | 0.365093 | 5.4:+13329673 | MS.gene59447:CDS |
GATTCCCGAGCCAAAGGGTT+AGG | 0.367347 | 5.4:+13330569 | MS.gene59447:CDS |
TGTCTCAAGATTTGGACTTA+TGG | 0.370173 | 5.4:+13329628 | MS.gene59447:CDS |
ATTGGTCGGAAGGGAGGTGG+AGG | 0.381354 | 5.4:-13327394 | None:intergenic |
ACCAATTCTCAGACCTTTCA+AGG | 0.383606 | 5.4:-13330031 | None:intergenic |
CGGAGAGGGAGTTGGTGAGA+AGG | 0.384523 | 5.4:-13327307 | None:intergenic |
CGGCAGCGATTCTGCGGTCT+AGG | 0.385899 | 5.4:-13327439 | None:intergenic |
ATCGCTGCCGGCGAGGAAAT+TGG | 0.386196 | 5.4:+13327452 | MS.gene59447:CDS |
CGAGGATACTTGAGGGTTAT+CGG | 0.386311 | 5.4:+13327546 | MS.gene59447:CDS |
GGTGGAGGAAGGAACGGAGG+TGG | 0.388259 | 5.4:-13327379 | None:intergenic |
ATGCTGCACCAATCATTTGC+AGG | 0.388800 | 5.4:-13332214 | None:intergenic |
CGGTGAGACGGAGGCGGGTG+AGG | 0.400218 | 5.4:-13327352 | None:intergenic |
GGGATTGGTCGGAAGGGAGG+TGG | 0.402642 | 5.4:-13327397 | None:intergenic |
GAGTTGGGTGGGATTGTTGT+TGG | 0.403136 | 5.4:+13327605 | MS.gene59447:CDS |
AAAGAGTGGAACGTGGGGTT+TGG | 0.404130 | 5.4:-13327190 | None:intergenic |
AACAGGTGAGAACCATTATA+AGG | 0.404504 | 5.4:+13331153 | MS.gene59447:intron |
ATACTTCTCCATGCAATTGC+TGG | 0.405414 | 5.4:+13329710 | MS.gene59447:CDS |
GGAGAGGGAGTTGGTGAGAA+GGG | 0.408597 | 5.4:-13327306 | None:intergenic |
GGAGGCGGGTGAGGTGGGAT+TGG | 0.414605 | 5.4:-13327343 | None:intergenic |
AACTGCAGCCGCCGATCCTC+CGG | 0.415291 | 5.4:-13329501 | None:intergenic |
GAAGGAACGGAGGTGGGGTT+CGG | 0.415482 | 5.4:-13327372 | None:intergenic |
GGGGTTCGGTGAGACGGAGG+CGG | 0.420001 | 5.4:-13327358 | None:intergenic |
AGTTGGGTGGGATTGTTGTT+GGG | 0.424283 | 5.4:+13327606 | MS.gene59447:CDS |
CCAATCATTTGCAGGCCAAC+AGG | 0.424765 | 5.4:-13332206 | None:intergenic |
AAGACCAATATGGATGAGTT+TGG | 0.425626 | 5.4:+13327629 | MS.gene59447:CDS |
TGTTGTTGGGAAGACCAATA+TGG | 0.429203 | 5.4:+13327619 | MS.gene59447:CDS |
CACCATCTTCAATAGTTTCA+CGG | 0.431389 | 5.4:-13330059 | None:intergenic |
GTGGAGGAAGGAACGGAGGT+GGG | 0.435354 | 5.4:-13327378 | None:intergenic |
GCAGGGAGAGCTGCTGAGAA+TGG | 0.436109 | 5.4:+13333117 | MS.gene59447:intron |
TGGGATGTTTCCAGGGTGCC+AGG | 0.440289 | 5.4:+13329470 | MS.gene59447:CDS |
TACAGATTTGTTCCACCAAT+CGG | 0.443443 | 5.4:+13333169 | MS.gene59447:CDS |
CTAGCTCATCAGCATAAACT+TGG | 0.445051 | 5.4:-13330532 | None:intergenic |
GGAGGTGGAGGAAGGAACGG+AGG | 0.445202 | 5.4:-13327382 | None:intergenic |
GTAGGTTTGAAGCCAACATA+TGG | 0.451615 | 5.4:+13329602 | MS.gene59447:CDS |
GATGAGCTAGACTCTCTCTA+TGG | 0.453282 | 5.4:+13330545 | MS.gene59447:CDS |
TTAAAATGAGATAGAAAGTT+GGG | 0.454413 | 5.4:-13329982 | None:intergenic |
GAGCTGATAGCGTTGAATAA+CGG | 0.457511 | 5.4:+13333191 | MS.gene59447:CDS |
TGAGACGGAGGCGGGTGAGG+TGG | 0.460578 | 5.4:-13327349 | None:intergenic |
CATACCAAACTCATCCATAT+TGG | 0.464143 | 5.4:-13327633 | None:intergenic |
TACCTCAAAACCTAACCCTT+TGG | 0.464714 | 5.4:-13330579 | None:intergenic |
GGGACATATGCCCTTTCAGC+TGG | 0.466577 | 5.4:+13330765 | MS.gene59447:CDS |
TAGGTAAATGTCAACCTAGC+TGG | 0.467203 | 5.4:+13332128 | MS.gene59447:intron |
TGGAGTGTGTAAGAGTAGCT+TGG | 0.470889 | 5.4:-13327238 | None:intergenic |
GATCCTCCGGATGATCCTCC+TGG | 0.472120 | 5.4:-13329488 | None:intergenic |
CGGCGGCTGCAGTTTCTGCC+AGG | 0.474234 | 5.4:+13329510 | MS.gene59447:CDS |
GTATCGTTGGGAAGTGATAC+TGG | 0.476953 | 5.4:+13329542 | MS.gene59447:CDS |
TCCAACTTGTCTCGCTATGA+TGG | 0.480589 | 5.4:+13330352 | MS.gene59447:CDS |
GATGAGGTCGGTGGCGGAGA+GGG | 0.480626 | 5.4:-13327321 | None:intergenic |
GTGAAGAGAGTTAAGGAGTT+GGG | 0.481622 | 5.4:+13327590 | MS.gene59447:CDS |
CAATATGGATGAGTTTGGTA+TGG | 0.484178 | 5.4:+13327634 | MS.gene59447:CDS |
GGGTTCGGTGAGACGGAGGC+GGG | 0.484229 | 5.4:-13327357 | None:intergenic |
GAGTAGCTTGGGTGGATGAT+GGG | 0.484757 | 5.4:-13327226 | None:intergenic |
GAGACGGAGGCGGGTGAGGT+GGG | 0.484958 | 5.4:-13327348 | None:intergenic |
GGAACGTGGGGTTTGGAGTG+TGG | 0.485069 | 5.4:-13327183 | None:intergenic |
TTCACCGCCGTCGCATCAAA+CGG | 0.485217 | 5.4:-13327572 | None:intergenic |
GGAGTGTGTAAGAGTAGCTT+GGG | 0.485964 | 5.4:-13327237 | None:intergenic |
GTTAAAATGAGATAGAAAGT+TGG | 0.486758 | 5.4:-13329983 | None:intergenic |
AAAACCTAACCCTTTGGCTC+GGG | 0.490071 | 5.4:-13330573 | None:intergenic |
CAGGGAGAGCTGCTGAGAAT+GGG | 0.490218 | 5.4:+13333118 | MS.gene59447:intron |
CAACGATACAACACACTGCC+TGG | 0.490331 | 5.4:-13329528 | None:intergenic |
GTTCATCGGTCGCTGATGCT+GGG | 0.490398 | 5.4:+13329687 | MS.gene59447:CDS |
GTCGGTGGCGGAGAGGGAGT+TGG | 0.490976 | 5.4:-13327315 | None:intergenic |
AGGGTGCCAGGAGGATCATC+CGG | 0.492708 | 5.4:+13329482 | MS.gene59447:CDS |
ATTGAAGATGGTGTTGATGC+TGG | 0.494844 | 5.4:+13330069 | MS.gene59447:CDS |
AGTTGGTGAGAAGGGAGTGA+CGG | 0.496681 | 5.4:-13327298 | None:intergenic |
GGGTGAGGTGGGATTGGATG+AGG | 0.497563 | 5.4:-13327337 | None:intergenic |
AGAGTAGCTTGGGTGGATGA+TGG | 0.500080 | 5.4:-13327227 | None:intergenic |
TGCTGGCAACCCAAGCGAAA+AGG | 0.500977 | 5.4:-13330299 | None:intergenic |
TAAGCAGCTGAAGGAGCTGC+AGG | 0.503173 | 5.4:-13331221 | None:intergenic |
GGATTGGATGAGGTCGGTGG+CGG | 0.503997 | 5.4:-13327327 | None:intergenic |
GGAGGTGGGGTTCGGTGAGA+CGG | 0.506358 | 5.4:-13327364 | None:intergenic |
TCGGCCTCCGTTTGATGCGA+CGG | 0.507198 | 5.4:+13327565 | MS.gene59447:CDS |
GGTGGGGTTCGGTGAGACGG+AGG | 0.508984 | 5.4:-13327361 | None:intergenic |
CCTAGCTGGACTACCTGCCT+TGG | 0.511239 | 5.4:+13332142 | MS.gene59447:CDS |
GTGCTTGAGCGATGAGGGAT+TGG | 0.513135 | 5.4:-13327412 | None:intergenic |
ACGCTATCAGCTCCGATTGG+TGG | 0.515905 | 5.4:-13333181 | None:intergenic |
ATCATAGTAACCAGCTGAAA+GGG | 0.518202 | 5.4:-13330775 | None:intergenic |
TAGCTTGGGTGGATGATGGG+AGG | 0.520873 | 5.4:-13327223 | None:intergenic |
TGGTGAGAAGGGAGTGACGG+AGG | 0.521192 | 5.4:-13327295 | None:intergenic |
TGGAGGAAGGAACGGAGGTG+GGG | 0.527467 | 5.4:-13327377 | None:intergenic |
CAAAACCTAACCCTTTGGCT+CGG | 0.528841 | 5.4:-13330574 | None:intergenic |
TTGGAAAGTAAACCCTTGAA+AGG | 0.529759 | 5.4:+13330018 | MS.gene59447:CDS |
CAGGCAGTGTGTTGTATCGT+TGG | 0.530074 | 5.4:+13329529 | MS.gene59447:CDS |
TTTATTGAGAATGGACCGAC+AGG | 0.531528 | 5.4:+13332179 | MS.gene59447:CDS |
ACCATCATAGCGAGACAAGT+TGG | 0.538119 | 5.4:-13330353 | None:intergenic |
GCAACAAGAACACCAGAAAG+AGG | 0.539656 | 5.4:-13327476 | None:intergenic |
CATCATAGTAACCAGCTGAA+AGG | 0.540452 | 5.4:-13330776 | None:intergenic |
ATGGAGATTCCCGAGCCAAA+GGG | 0.540501 | 5.4:+13330564 | MS.gene59447:CDS |
GGTGAGAAGGGAGTGACGGA+GGG | 0.542284 | 5.4:-13327294 | None:intergenic |
CAACCCGTGGGATGTTTCCA+GGG | 0.543202 | 5.4:+13329463 | MS.gene59447:CDS |
TATCATGACCAGCAATTGCA+TGG | 0.543365 | 5.4:-13329718 | None:intergenic |
CTTGAGACACGTCCATATGT+TGG | 0.543787 | 5.4:-13329614 | None:intergenic |
AAGAGAGTTAAGGAGTTGGG+TGG | 0.544145 | 5.4:+13327593 | MS.gene59447:CDS |
GTCATGTGCTTGAGCGATGA+GGG | 0.545346 | 5.4:-13327417 | None:intergenic |
TGGTGGAAGTGTGAGGCAGC+CGG | 0.546383 | 5.4:+13329562 | MS.gene59447:CDS |
CGATGAGGGATTGGTCGGAA+GGG | 0.546485 | 5.4:-13327403 | None:intergenic |
GATCCTTTGGCTATGTATGC+TGG | 0.549623 | 5.4:+13331351 | MS.gene59447:CDS |
AAGGGAGGTGGAGGAAGGAA+CGG | 0.550801 | 5.4:-13327385 | None:intergenic |
AGGAGGATCATCCGGAGGAT+CGG | 0.550952 | 5.4:+13329490 | MS.gene59447:CDS |
AGAGAGTTAAGGAGTTGGGT+GGG | 0.551590 | 5.4:+13327594 | MS.gene59447:CDS |
ATCCGTGAAACTATTGAAGA+TGG | 0.552239 | 5.4:+13330057 | MS.gene59447:CDS |
AGCTTGGGTGGATGATGGGA+GGG | 0.554935 | 5.4:-13327222 | None:intergenic |
CCACATGGTAAAACCAAGGC+AGG | 0.555507 | 5.4:-13332155 | None:intergenic |
AACTCATACTTGCTTACTTG+AGG | 0.556320 | 5.4:-13329753 | None:intergenic |
GTCGGAAGGGAGGTGGAGGA+AGG | 0.557260 | 5.4:-13327390 | None:intergenic |
GGTGGATCGAGGATACTTGA+GGG | 0.557902 | 5.4:+13327539 | MS.gene59447:CDS |
CCAATTCTCAGACCTTTCAA+GGG | 0.558077 | 5.4:-13330030 | None:intergenic |
TATGGAGATTCCCGAGCCAA+AGG | 0.558471 | 5.4:+13330563 | MS.gene59447:CDS |
AATATGGATGAGTTTGGTAT+GGG | 0.559810 | 5.4:+13327635 | MS.gene59447:CDS |
TCTGACATGCCGTCCACTGG+TGG | 0.560449 | 5.4:+13327521 | MS.gene59447:CDS |
CTAGACCGCAGAATCGCTGC+CGG | 0.563020 | 5.4:+13327440 | MS.gene59447:CDS |
GCGATGAGGGATTGGTCGGA+AGG | 0.563493 | 5.4:-13327404 | None:intergenic |
ACGTCTGACATGCCGTCCAC+TGG | 0.564202 | 5.4:+13327518 | MS.gene59447:CDS |
GATTGGTGCAGCATTTAATG+AGG | 0.564316 | 5.4:+13332223 | MS.gene59447:CDS |
ATATTACAAACGAGCACAGC+AGG | 0.567788 | 5.4:+13330800 | MS.gene59447:CDS |
CCAAGGCAGGTAGTCCAGCT+AGG | 0.568026 | 5.4:-13332142 | None:intergenic |
AGGCAGTGTGTTGTATCGTT+GGG | 0.568441 | 5.4:+13329530 | MS.gene59447:CDS |
CGGAGGGTGAGAATTTGAGA+GGG | 0.576471 | 5.4:-13327278 | None:intergenic |
GACGGCGGTGAAGAGAGTTA+AGG | 0.579689 | 5.4:+13327583 | MS.gene59447:CDS |
ACGGAGGGTGAGAATTTGAG+AGG | 0.581234 | 5.4:-13327279 | None:intergenic |
CTGAAAAGCAGAAGCTTCAG+TGG | 0.581476 | 5.4:-13327663 | None:intergenic |
GGACCGACAGGGCTTCCTGT+TGG | 0.581994 | 5.4:+13332191 | MS.gene59447:CDS |
TGAGGGATTGGTCGGAAGGG+AGG | 0.584231 | 5.4:-13327400 | None:intergenic |
AGCAGCTGAAGGAGCTGCAG+GGG | 0.585773 | 5.4:-13331219 | None:intergenic |
GGATGATCCTCCTGGCACCC+TGG | 0.587626 | 5.4:-13329480 | None:intergenic |
GAGGTGGGATTGGATGAGGT+CGG | 0.587835 | 5.4:-13327333 | None:intergenic |
AAGAGGACCAATTTCCTCGC+CGG | 0.588428 | 5.4:-13327459 | None:intergenic |
CCTCGCCGGCAGCGATTCTG+CGG | 0.590915 | 5.4:-13327445 | None:intergenic |
GGTGAAGAGAGTTAAGGAGT+TGG | 0.591063 | 5.4:+13327589 | MS.gene59447:CDS |
TCAACGCTATCAGCTCCGAT+TGG | 0.591245 | 5.4:-13333184 | None:intergenic |
GGCACCCTGGAAACATCCCA+CGG | 0.592300 | 5.4:-13329467 | None:intergenic |
GAGGGAGAAGCGTGAAAGAG+TGG | 0.593307 | 5.4:-13327204 | None:intergenic |
AGGATCATCCGGAGGATCGG+CGG | 0.594477 | 5.4:+13329493 | MS.gene59447:CDS |
TCATACTTGCTTACTTGAGG+TGG | 0.595066 | 5.4:-13329750 | None:intergenic |
GCGTCATCACTTGATGCCAT+TGG | 0.595721 | 5.4:+13329656 | MS.gene59447:CDS |
GTGGGATTGGATGAGGTCGG+TGG | 0.596179 | 5.4:-13327330 | None:intergenic |
AATAGGTGACTGCCAACCCG+TGG | 0.597933 | 5.4:+13329450 | MS.gene59447:intron |
CGATGAACCAAAGCAGCCAA+TGG | 0.598497 | 5.4:-13329672 | None:intergenic |
CCTGGAAACATCCCACGGGT+TGG | 0.599862 | 5.4:-13329462 | None:intergenic |
AGCGTGAAAGAGTGGAACGT+GGG | 0.600331 | 5.4:-13327196 | None:intergenic |
GGATGAGGTCGGTGGCGGAG+AGG | 0.610120 | 5.4:-13327322 | None:intergenic |
TGGTGGATCGAGGATACTTG+AGG | 0.610399 | 5.4:+13327538 | MS.gene59447:CDS |
AAAGCGAGGACATAGTATGC+TGG | 0.610724 | 5.4:-13330316 | None:intergenic |
AGGCCAACAGGAAGCCCTGT+CGG | 0.612914 | 5.4:-13332194 | None:intergenic |
GCACCCTGGAAACATCCCAC+GGG | 0.614008 | 5.4:-13329466 | None:intergenic |
TTGAGCGATGAGGGATTGGT+CGG | 0.615615 | 5.4:-13327408 | None:intergenic |
GTGTGTAAGAGTAGCTTGGG+TGG | 0.617325 | 5.4:-13327234 | None:intergenic |
CCGCAGAATCGCTGCCGGCG+AGG | 0.618628 | 5.4:+13327445 | MS.gene59447:CDS |
GGCAACCCAAGCGAAAAGGA+TGG | 0.619210 | 5.4:-13330295 | None:intergenic |
AAGCAGCTGAAGGAGCTGCA+GGG | 0.619430 | 5.4:-13331220 | None:intergenic |
TGCCGTCCACTGGTGGATCG+AGG | 0.620221 | 5.4:+13327528 | MS.gene59447:CDS |
ATCCTCGATCCACCAGTGGA+CGG | 0.622376 | 5.4:-13327530 | None:intergenic |
GAGGGTGAGAATTTGAGAGG+GGG | 0.630434 | 5.4:-13327276 | None:intergenic |
GGTCATGTGCTTGAGCGATG+AGG | 0.632305 | 5.4:-13327418 | None:intergenic |
GCCTCCGTTTGATGCGACGG+CGG | 0.643211 | 5.4:+13327568 | MS.gene59447:CDS |
ATTAGGATGCTCTGTGAACG+AGG | 0.648039 | 5.4:+13330134 | MS.gene59447:CDS |
GGAGGGTGAGAATTTGAGAG+GGG | 0.649018 | 5.4:-13327277 | None:intergenic |
ATATGGATGAGTTTGGTATG+GGG | 0.649295 | 5.4:+13327636 | MS.gene59447:CDS |
CCATTCTCAATAAATCCACA+TGG | 0.649598 | 5.4:-13332170 | None:intergenic |
TCACCAGCATACATAGCCAA+AGG | 0.651194 | 5.4:-13331354 | None:intergenic |
AAGTATCCTCGATCCACCAG+TGG | 0.660887 | 5.4:-13327534 | None:intergenic |
ATAGGTGACTGCCAACCCGT+GGG | 0.663939 | 5.4:+13329451 | MS.gene59447:intron |
TTATTGAGAATGGACCGACA+GGG | 0.664505 | 5.4:+13332180 | MS.gene59447:CDS |
AAGATGATTCAGACAAAGCG+AGG | 0.664996 | 5.4:-13330330 | None:intergenic |
GATGTTTCCAGGGTGCCAGG+AGG | 0.670862 | 5.4:+13329473 | MS.gene59447:CDS |
AAATCCACATGGTAAAACCA+AGG | 0.672604 | 5.4:-13332159 | None:intergenic |
ACCGCCGTCGCATCAAACGG+AGG | 0.674606 | 5.4:-13327569 | None:intergenic |
AAGCGTGAAAGAGTGGAACG+TGG | 0.680313 | 5.4:-13327197 | None:intergenic |
GCGTGAAAGAGTGGAACGTG+GGG | 0.681489 | 5.4:-13327195 | None:intergenic |
GTGATACTGGTGGAAGTGTG+AGG | 0.689164 | 5.4:+13329555 | MS.gene59447:CDS |
AGGGTGAGAATTTGAGAGGG+GGG | 0.689829 | 5.4:-13327275 | None:intergenic |
GTGCCAGGAGGATCATCCGG+AGG | 0.694596 | 5.4:+13329485 | MS.gene59447:CDS |
TCGTTGGGAAGTGATACTGG+TGG | 0.795744 | 5.4:+13329545 | MS.gene59447:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAGAATATGAAA+TGG | - | chr5.4:13328371-13328390 | None:intergenic | 10.0% |
!! | AATAATAACAACATAAATAT+AGG | + | chr5.4:13331862-13331881 | MS.gene59447:intron | 10.0% |
!! | TATCTAAAAACTAAAAAATA+AGG | - | chr5.4:13328528-13328547 | None:intergenic | 10.0% |
!!! | TGATTAATTAAGATATTTTT+TGG | - | chr5.4:13331634-13331653 | None:intergenic | 10.0% |
!!! | TTCTATTTTTATTTTTTTCA+AGG | - | chr5.4:13333070-13333089 | None:intergenic | 10.0% |
!!! | TTTTGAAATATTAATAATCT+CGG | - | chr5.4:13328115-13328134 | None:intergenic | 10.0% |
!! | AAATACAATACATACAAAAT+TGG | - | chr5.4:13330692-13330711 | None:intergenic | 15.0% |
!! | AATTGATTATCTATTATCTA+AGG | - | chr5.4:13331604-13331623 | None:intergenic | 15.0% |
!! | ATAATAGTATATTGGATTTA+TGG | - | chr5.4:13328736-13328755 | None:intergenic | 15.0% |
!! | CAAAATGACTAATAAAAAAA+AGG | - | chr5.4:13328058-13328077 | None:intergenic | 15.0% |
!! | CATATATGTATTTATTGTAT+AGG | - | chr5.4:13331942-13331961 | None:intergenic | 15.0% |
!! | TACTAACTTAGAAATATAAA+AGG | + | chr5.4:13328703-13328722 | MS.gene59447:intron | 15.0% |
!!! | AACAATTTTTAAACTTTCTT+TGG | - | chr5.4:13332453-13332472 | None:intergenic | 15.0% |
!!! | ACTTTATTTTATGTATTTCT+TGG | + | chr5.4:13330831-13330850 | MS.gene59447:intron | 15.0% |
!!! | ATTTTAACCTAAAATAATGT+GGG | + | chr5.4:13332965-13332984 | MS.gene59447:intron | 15.0% |
!!! | CATTAATAAATCATTTTGTT+TGG | + | chr5.4:13330474-13330493 | MS.gene59447:intron | 15.0% |
!!! | CTTTTTTTTATTAGTCATTT+TGG | + | chr5.4:13328056-13328075 | MS.gene59447:intron | 15.0% |
!!! | TATTTTAACCTAAAATAATG+TGG | + | chr5.4:13332964-13332983 | MS.gene59447:intron | 15.0% |
!!! | TTATTTTTTTCAAGGAAAAA+AGG | - | chr5.4:13333062-13333081 | None:intergenic | 15.0% |
!!! | TTCATTTATTTTAGAAGTTT+GGG | + | chr5.4:13331099-13331118 | MS.gene59447:intron | 15.0% |
!!! | TTGAAAGTTTTAATACATTT+AGG | + | chr5.4:13328263-13328282 | MS.gene59447:intron | 15.0% |
!!! | TTTCATTTATTTTAGAAGTT+TGG | + | chr5.4:13331098-13331117 | MS.gene59447:intron | 15.0% |
!!! | TTTGAAATATTAATAATCTC+GGG | - | chr5.4:13328114-13328133 | None:intergenic | 15.0% |
!! | AAACTTATTCCAGTTATAAA+TGG | - | chr5.4:13329404-13329423 | None:intergenic | 20.0% |
!! | AAAGTAAATGGTTAAATAGA+GGG | + | chr5.4:13328234-13328253 | MS.gene59447:intron | 20.0% |
!! | AAATGAAAAGGGTTAAATAA+CGG | - | chr5.4:13330250-13330269 | None:intergenic | 20.0% |
!! | AACTTATTCCAGTTATAAAT+GGG | - | chr5.4:13329403-13329422 | None:intergenic | 20.0% |
!! | AAGTATTTCATTCTTCTTAT+CGG | + | chr5.4:13331389-13331408 | MS.gene59447:intron | 20.0% |
!! | ACAGAATAAAATATTGTGTT+CGG | - | chr5.4:13330442-13330461 | None:intergenic | 20.0% |
!! | ATAGAAATACACATATCAAA+AGG | - | chr5.4:13327990-13328009 | None:intergenic | 20.0% |
!! | GATGTATTCAATGTTAATAA+TGG | + | chr5.4:13328564-13328583 | MS.gene59447:intron | 20.0% |
!! | GATGTTAGATAATAGTATAT+TGG | - | chr5.4:13328744-13328763 | None:intergenic | 20.0% |
!! | TAACATCTAGTATTCAATAT+GGG | + | chr5.4:13328757-13328776 | MS.gene59447:intron | 20.0% |
!! | TACTAATATTACAAACAACA+GGG | - | chr5.4:13328928-13328947 | None:intergenic | 20.0% |
!! | TATTAGTAATGAATATGAGA+AGG | + | chr5.4:13328940-13328959 | MS.gene59447:intron | 20.0% |
!! | TGTTGAATTATAGAAAATAG+AGG | + | chr5.4:13331777-13331796 | MS.gene59447:intron | 20.0% |
!! | TTAAAATGAGATAGAAAGTT+GGG | - | chr5.4:13329985-13330004 | None:intergenic | 20.0% |
!! | TTAATTAATCAATAAGTGCA+GGG | + | chr5.4:13331643-13331662 | MS.gene59447:intron | 20.0% |
!! | TTACTAATATTACAAACAAC+AGG | - | chr5.4:13328929-13328948 | None:intergenic | 20.0% |
!! | TTTAGAAATCTTACAACATT+TGG | - | chr5.4:13329795-13329814 | None:intergenic | 20.0% |
!!! | AAAAATAGAATCATCCTTTT+TGG | + | chr5.4:13333080-13333099 | MS.gene59447:intron | 20.0% |
!!! | AATCAATAATGTAATTTGTC+AGG | + | chr5.4:13329954-13329973 | MS.gene59447:intron | 20.0% |
!!! | ATTCTCACATGTTTTTTTTT+AGG | + | chr5.4:13327861-13327880 | MS.gene59447:intron | 20.0% |
!!! | CTATAGTTTTTCTATAAACA+TGG | - | chr5.4:13332824-13332843 | None:intergenic | 20.0% |
!!! | CTGTCAAATTTTACTTATAT+TGG | + | chr5.4:13328147-13328166 | MS.gene59447:intron | 20.0% |
!!! | TAATGTTTGCCTTTATTTAT+TGG | + | chr5.4:13332090-13332109 | MS.gene59447:intron | 20.0% |
!!! | TATTTTATGTATTTCTTGGT+GGG | + | chr5.4:13330835-13330854 | MS.gene59447:intron | 20.0% |
!!! | TGTTTGTTGTTTTTTATATC+CGG | + | chr5.4:13328402-13328421 | MS.gene59447:intron | 20.0% |
!!! | TGTTTGTTTTGTTGATTTTA+AGG | + | chr5.4:13328433-13328452 | MS.gene59447:intron | 20.0% |
!!! | TTATTTTATGTATTTCTTGG+TGG | + | chr5.4:13330834-13330853 | MS.gene59447:intron | 20.0% |
!!! | TTCTCACATGTTTTTTTTTA+GGG | + | chr5.4:13327862-13327881 | MS.gene59447:intron | 20.0% |
!!! | TTCTCTTTTTAATACATTTC+AGG | + | chr5.4:13330722-13330741 | MS.gene59447:intron | 20.0% |
!!! | TTTACATTTTGCTTTAGATT+GGG | + | chr5.4:13332721-13332740 | MS.gene59447:intron | 20.0% |
! | AAAGAAACAATTACTATTGC+AGG | - | chr5.4:13331300-13331319 | None:intergenic | 25.0% |
! | AAAGTGAAAAAGAAAACTCT+AGG | + | chr5.4:13332684-13332703 | MS.gene59447:intron | 25.0% |
! | AAATAAATTCCAAGCCAAAA+AGG | - | chr5.4:13333097-13333116 | None:intergenic | 25.0% |
! | AATGCAAAATTGCTCTATTT+AGG | - | chr5.4:13327926-13327945 | None:intergenic | 25.0% |
! | AGTCAAATTTATATAGGCTA+AGG | + | chr5.4:13331837-13331856 | MS.gene59447:intron | 25.0% |
! | ATAATGGCGATATCAAAATA+AGG | + | chr5.4:13328580-13328599 | MS.gene59447:intron | 25.0% |
! | ATAGTCTTTGTTCAATATGA+TGG | + | chr5.4:13329852-13329871 | MS.gene59447:intron | 25.0% |
! | ATCCTTCTCAATTTCAAATT+TGG | + | chr5.4:13330613-13330632 | MS.gene59447:intron | 25.0% |
! | ATGATCAAAGTTAACTAACT+TGG | + | chr5.4:13332913-13332932 | MS.gene59447:intron | 25.0% |
! | CTAACATCTAGTATTCAATA+TGG | + | chr5.4:13328756-13328775 | MS.gene59447:intron | 25.0% |
! | CTTAAAGCTATTCCTTATAA+TGG | - | chr5.4:13331168-13331187 | None:intergenic | 25.0% |
! | CTTAATTAATCAATAAGTGC+AGG | + | chr5.4:13331642-13331661 | MS.gene59447:intron | 25.0% |
! | GAAAGTAAATGGTTAAATAG+AGG | + | chr5.4:13328233-13328252 | MS.gene59447:intron | 25.0% |
! | GTATATTGGATTTATGGTAT+CGG | - | chr5.4:13328730-13328749 | None:intergenic | 25.0% |
! | GTTAAAATGAGATAGAAAGT+TGG | - | chr5.4:13329986-13330005 | None:intergenic | 25.0% |
! | GTTCATTGTTGAAAAGAAAT+TGG | - | chr5.4:13329934-13329953 | None:intergenic | 25.0% |
! | TAAATTCTCGTTATTAGCAA+TGG | + | chr5.4:13329811-13329830 | MS.gene59447:intron | 25.0% |
! | TAATCTCTCTCTAAATCTAA+TGG | - | chr5.4:13329191-13329210 | None:intergenic | 25.0% |
! | TAATGGCGATATCAAAATAA+GGG | + | chr5.4:13328581-13328600 | MS.gene59447:intron | 25.0% |
! | TACAGGTATATGCATATATA+AGG | - | chr5.4:13330656-13330675 | None:intergenic | 25.0% |
! | TATATACTTGACACATGTTA+AGG | - | chr5.4:13331688-13331707 | None:intergenic | 25.0% |
! | TATATTGGATTTATGGTATC+GGG | - | chr5.4:13328729-13328748 | None:intergenic | 25.0% |
! | TCATTTGTCCATTAACTTAA+AGG | + | chr5.4:13330264-13330283 | MS.gene59447:intron | 25.0% |
! | TGAAAAGAAAAATGATCCTT+TGG | + | chr5.4:13331338-13331357 | MS.gene59447:CDS | 25.0% |
! | TTGCAATTTCAATACATTCA+TGG | - | chr5.4:13327837-13327856 | None:intergenic | 25.0% |
!! | AAGTTAATGGACAAATGAAA+AGG | - | chr5.4:13330262-13330281 | None:intergenic | 25.0% |
!! | ACGTCTATTTTACATGATAA+GGG | - | chr5.4:13332540-13332559 | None:intergenic | 25.0% |
!! | AGTTAATGGACAAATGAAAA+GGG | - | chr5.4:13330261-13330280 | None:intergenic | 25.0% |
!! | ATAGAACAAAAAAGTACACT+TGG | - | chr5.4:13332790-13332809 | None:intergenic | 25.0% |
!! | CATTATAAGGAATAGCTTTA+AGG | + | chr5.4:13331166-13331185 | MS.gene59447:CDS | 25.0% |
!! | TAAATAGAGCAATTTTGCAT+TGG | + | chr5.4:13327925-13327944 | MS.gene59447:intron | 25.0% |
!! | TGTATTTTTCTTTTCCAGTT+TGG | + | chr5.4:13328461-13328480 | MS.gene59447:intron | 25.0% |
!! | TTGGATCATTTCTTTTATAC+AGG | - | chr5.4:13330673-13330692 | None:intergenic | 25.0% |
!!! | ATAAATCATTTTGTTTGGCT+TGG | + | chr5.4:13330479-13330498 | MS.gene59447:intron | 25.0% |
!!! | CTTTACATTTTGCTTTAGAT+TGG | + | chr5.4:13332720-13332739 | MS.gene59447:intron | 25.0% |
!!! | GTGAAAATGAGAATTTTGAT+GGG | + | chr5.4:13330744-13330763 | MS.gene59447:CDS | 25.0% |
!!! | TGAAAATGAGAATTTTGATG+GGG | + | chr5.4:13330745-13330764 | MS.gene59447:CDS | 25.0% |
!!! | TTTCTAAAGAGCATTAATGA+GGG | + | chr5.4:13332335-13332354 | MS.gene59447:intron | 25.0% |
AAATGATGACTTAATTCGCT+AGG | - | chr5.4:13331746-13331765 | None:intergenic | 30.0% | |
AAGTAAAATTTGACAGAGTC+AGG | - | chr5.4:13328143-13328162 | None:intergenic | 30.0% | |
AATACAAGACATGCAAAAAG+TGG | + | chr5.4:13329295-13329314 | MS.gene59447:intron | 30.0% | |
AATATGGATGAGTTTGGTAT+GGG | + | chr5.4:13327635-13327654 | MS.gene59447:CDS | 30.0% | |
AATTTCATGTGTGATATTCC+AGG | - | chr5.4:13332426-13332445 | None:intergenic | 30.0% | |
ACCTTCTCTATATCTAGATA+CGG | + | chr5.4:13330506-13330525 | MS.gene59447:intron | 30.0% | |
AGTAAAATTTGACAGAGTCA+GGG | - | chr5.4:13328142-13328161 | None:intergenic | 30.0% | |
ATACAAGACATGCAAAAAGT+GGG | + | chr5.4:13329296-13329315 | MS.gene59447:intron | 30.0% | |
ATTGAATTAAGTTTGTGAGC+AGG | + | chr5.4:13329019-13329038 | MS.gene59447:intron | 30.0% | |
ATTTCATGTGTGATATTCCA+GGG | - | chr5.4:13332425-13332444 | None:intergenic | 30.0% | |
CAAAACAAACAAACAACTAC+CGG | - | chr5.4:13328424-13328443 | None:intergenic | 30.0% | |
CAATAATGTGCATATCACAA+TGG | + | chr5.4:13328626-13328645 | MS.gene59447:intron | 30.0% | |
CAGCAGAGTCAAATTTATAT+AGG | + | chr5.4:13331831-13331850 | MS.gene59447:intron | 30.0% | |
CATTTGACAACTTTCAATCT+TGG | - | chr5.4:13332896-13332915 | None:intergenic | 30.0% | |
CTAACATGCAATAATGCAAA+AGG | - | chr5.4:13331275-13331294 | None:intergenic | 30.0% | |
CTCAAAGCTCTATAAACTTT+AGG | - | chr5.4:13331548-13331567 | None:intergenic | 30.0% | |
CTCACTTCAAATTATGACTA+AGG | - | chr5.4:13327758-13327777 | None:intergenic | 30.0% | |
CTTATCATGTAAAATAGACG+TGG | + | chr5.4:13332539-13332558 | MS.gene59447:intron | 30.0% | |
GAGAAACCACCAATAAATAA+AGG | - | chr5.4:13332102-13332121 | None:intergenic | 30.0% | |
GATGCATATGTTCATTCAAT+AGG | + | chr5.4:13329433-13329452 | MS.gene59447:intron | 30.0% | |
GATTTAGAGAGAGATTATAG+AGG | + | chr5.4:13329194-13329213 | MS.gene59447:intron | 30.0% | |
GCAGAATGATAATTGCAAAT+TGG | + | chr5.4:13329072-13329091 | MS.gene59447:intron | 30.0% | |
GTGACGTAATTGAAAGTAAA+TGG | + | chr5.4:13328222-13328241 | MS.gene59447:intron | 30.0% | |
GTTCTTCCAAGATTATGTTA+GGG | + | chr5.4:13328169-13328188 | MS.gene59447:intron | 30.0% | |
TAGATTTAGAGAGATTGTAG+AGG | + | chr5.4:13329138-13329157 | MS.gene59447:intron | 30.0% | |
TCTAAATCTAACAATCCCTA+CGG | - | chr5.4:13329128-13329147 | None:intergenic | 30.0% | |
TGAAATTGAGAAGGATTAGA+AGG | - | chr5.4:13330609-13330628 | None:intergenic | 30.0% | |
TGACTGAATTCATGATCATT+GGG | - | chr5.4:13330888-13330907 | None:intergenic | 30.0% | |
TTTAGTCCCTAACATAATCT+TGG | - | chr5.4:13328178-13328197 | None:intergenic | 30.0% | |
TTTCCTTTATGAACTTACGT+AGG | - | chr5.4:13332656-13332675 | None:intergenic | 30.0% | |
! | AAATTGGCTTCATAACAAGA+AGG | - | chr5.4:13329918-13329937 | None:intergenic | 30.0% |
! | AGCCAAATTTGAAATTGAGA+AGG | - | chr5.4:13330618-13330637 | None:intergenic | 30.0% |
! | ATACATGCCCACATTATTTT+AGG | - | chr5.4:13332975-13332994 | None:intergenic | 30.0% |
! | ATCAATCCTGGGAATAATTT+TGG | - | chr5.4:13332399-13332418 | None:intergenic | 30.0% |
! | CAATAATGTAATTTGTCAGG+AGG | + | chr5.4:13329957-13329976 | MS.gene59447:intron | 30.0% |
! | CACGTCTATTTTACATGATA+AGG | - | chr5.4:13332541-13332560 | None:intergenic | 30.0% |
! | CTCATTAATGCTCTTTAGAA+AGG | - | chr5.4:13332336-13332355 | None:intergenic | 30.0% |
! | GGTGAAAATGAGAATTTTGA+TGG | + | chr5.4:13330743-13330762 | MS.gene59447:intron | 30.0% |
! | TGTTTGCCTTTATTTATTGG+TGG | + | chr5.4:13332093-13332112 | MS.gene59447:intron | 30.0% |
! | TTAACTAACTTGGTCTTTCT+GGG | + | chr5.4:13332923-13332942 | MS.gene59447:intron | 30.0% |
! | TTTTCTTTTCCAGTTTGGAT+GGG | + | chr5.4:13328466-13328485 | MS.gene59447:intron | 30.0% |
! | TTTTTCTTTTCCAGTTTGGA+TGG | + | chr5.4:13328465-13328484 | MS.gene59447:intron | 30.0% |
!! | CTTTCTAAAGAGCATTAATG+AGG | + | chr5.4:13332334-13332353 | MS.gene59447:intron | 30.0% |
!! | TTGGTGGTTTCTCTTTTTAT+AGG | + | chr5.4:13332109-13332128 | MS.gene59447:intron | 30.0% |
!! | TTTTAACTCTGCAAGTTCTT+TGG | + | chr5.4:13329999-13330018 | MS.gene59447:CDS | 30.0% |
!!! | ATTTTTTATTGTTGTTCCCC+TGG | + | chr5.4:13332628-13332647 | MS.gene59447:intron | 30.0% |
!!! | GATTGATGATTTGTTTTCCT+GGG | + | chr5.4:13332477-13332496 | MS.gene59447:intron | 30.0% |
!!! | GGACTCAGCTTAATATTTTT+TGG | + | chr5.4:13330910-13330929 | MS.gene59447:intron | 30.0% |
AAACAACAAACAGAGTGCAA+AGG | - | chr5.4:13328394-13328413 | None:intergenic | 35.0% | |
AAATCCACATGGTAAAACCA+AGG | - | chr5.4:13332162-13332181 | None:intergenic | 35.0% | |
AACAGGTGAGAACCATTATA+AGG | + | chr5.4:13331153-13331172 | MS.gene59447:intron | 35.0% | |
AACTCATACTTGCTTACTTG+AGG | - | chr5.4:13329756-13329775 | None:intergenic | 35.0% | |
AAGACCAATATGGATGAGTT+TGG | + | chr5.4:13327629-13327648 | MS.gene59447:CDS | 35.0% | |
AGACACATAAAGAACAAGAG+TGG | - | chr5.4:13330985-13331004 | None:intergenic | 35.0% | |
AGAGAGATTATAGAGGATCT+GGG | + | chr5.4:13329201-13329220 | MS.gene59447:intron | 35.0% | |
ATAAAGGCAAACATTATGCC+CGG | - | chr5.4:13332086-13332105 | None:intergenic | 35.0% | |
ATATGGATGAGTTTGGTATG+GGG | + | chr5.4:13327636-13327655 | MS.gene59447:CDS | 35.0% | |
ATCATAGTAACCAGCTGAAA+GGG | - | chr5.4:13330778-13330797 | None:intergenic | 35.0% | |
ATCCGTGAAACTATTGAAGA+TGG | + | chr5.4:13330057-13330076 | MS.gene59447:CDS | 35.0% | |
ATGATCATGAATTCAGTCAC+AGG | + | chr5.4:13330889-13330908 | MS.gene59447:intron | 35.0% | |
ATGTCACCAAAATTATTCCC+AGG | + | chr5.4:13332390-13332409 | MS.gene59447:intron | 35.0% | |
CAATATGGATGAGTTTGGTA+TGG | + | chr5.4:13327634-13327653 | MS.gene59447:CDS | 35.0% | |
CACAATGGTTATGGAAGTAA+GGG | + | chr5.4:13328641-13328660 | MS.gene59447:intron | 35.0% | |
CACCATCTTCAATAGTTTCA+CGG | - | chr5.4:13330062-13330081 | None:intergenic | 35.0% | |
CAGGAGTTCAACATTTGTTT+GGG | + | chr5.4:13329038-13329057 | MS.gene59447:intron | 35.0% | |
CATACCAAACTCATCCATAT+TGG | - | chr5.4:13327636-13327655 | None:intergenic | 35.0% | |
CATCAAACAAACGTTTCCTT+AGG | - | chr5.4:13332373-13332392 | None:intergenic | 35.0% | |
CATTATCTCTTGTAGAACTC+AGG | - | chr5.4:13333001-13333020 | None:intergenic | 35.0% | |
CCATGTGGATTTATTGAGAA+TGG | + | chr5.4:13332170-13332189 | MS.gene59447:CDS | 35.0% | |
CCATTCTCAATAAATCCACA+TGG | - | chr5.4:13332173-13332192 | None:intergenic | 35.0% | |
CCTTCAGCTGCTTATAAAAT+TGG | + | chr5.4:13331230-13331249 | MS.gene59447:CDS | 35.0% | |
GAGTTTGAGAGAAAAATGAG+TGG | - | chr5.4:13330164-13330183 | None:intergenic | 35.0% | |
GCAATGGTTATTCACTATGT+TGG | + | chr5.4:13329827-13329846 | MS.gene59447:intron | 35.0% | |
GGTTCTTCCAAGATTATGTT+AGG | + | chr5.4:13328168-13328187 | MS.gene59447:intron | 35.0% | |
GTACCTACGTAAGTTCATAA+AGG | + | chr5.4:13332650-13332669 | MS.gene59447:intron | 35.0% | |
GTATCTAGATATAGAGAAGG+TGG | - | chr5.4:13330507-13330526 | None:intergenic | 35.0% | |
GTGACTGAATTCATGATCAT+TGG | - | chr5.4:13330889-13330908 | None:intergenic | 35.0% | |
GTTGTTTGTTCTCTGTATGT+TGG | + | chr5.4:13329324-13329343 | MS.gene59447:intron | 35.0% | |
TACAAGACATGCAAAAAGTG+GGG | + | chr5.4:13329297-13329316 | MS.gene59447:intron | 35.0% | |
TATCTTAACATGTGCCTTGA+GGG | + | chr5.4:13328016-13328035 | MS.gene59447:intron | 35.0% | |
TATGAGTTCTTCACTGTGTT+TGG | + | chr5.4:13329768-13329787 | MS.gene59447:intron | 35.0% | |
TCAACATACTGAACTACATG+TGG | + | chr5.4:13332763-13332782 | MS.gene59447:intron | 35.0% | |
TCACAATGGTTATGGAAGTA+AGG | + | chr5.4:13328640-13328659 | MS.gene59447:intron | 35.0% | |
TCCGTATCTAGATATAGAGA+AGG | - | chr5.4:13330510-13330529 | None:intergenic | 35.0% | |
TCTTTGTCTTTGACATTTGC+AGG | + | chr5.4:13331315-13331334 | MS.gene59447:intron | 35.0% | |
TGAGCTGCGTAATAAAAGAA+CGG | + | chr5.4:13328857-13328876 | MS.gene59447:intron | 35.0% | |
TGTCTCAAGATTTGGACTTA+TGG | + | chr5.4:13329628-13329647 | MS.gene59447:CDS | 35.0% | |
TGTGCATATCACAATGGTTA+TGG | + | chr5.4:13328632-13328651 | MS.gene59447:intron | 35.0% | |
TTACGTATTACACTGTTGGT+AGG | + | chr5.4:13332857-13332876 | MS.gene59447:intron | 35.0% | |
TTATGCGTGTTCTATGTAAC+AGG | + | chr5.4:13331136-13331155 | MS.gene59447:intron | 35.0% | |
TTCGCTAGGATATTCCTTTA+TGG | - | chr5.4:13331732-13331751 | None:intergenic | 35.0% | |
TTGGAAAGTAAACCCTTGAA+AGG | + | chr5.4:13330018-13330037 | MS.gene59447:CDS | 35.0% | |
TTGTACTGCCCATTTATAAC+TGG | + | chr5.4:13329392-13329411 | MS.gene59447:intron | 35.0% | |
TTTGAGAGAAAAATGAGTGG+AGG | - | chr5.4:13330161-13330180 | None:intergenic | 35.0% | |
TTTGTTCTCTGTATGTTGGT+GGG | + | chr5.4:13329328-13329347 | MS.gene59447:intron | 35.0% | |
! | AAACTAGTCTCTGACTTTGT+AGG | - | chr5.4:13328334-13328353 | None:intergenic | 35.0% |
! | AACTAGTCTCTGACTTTGTA+GGG | - | chr5.4:13328333-13328352 | None:intergenic | 35.0% |
! | AACTGGAATAAGTTTTGCTC+AGG | + | chr5.4:13329409-13329428 | MS.gene59447:intron | 35.0% |
! | ACAACAGGGCATTTCAAATT+TGG | - | chr5.4:13328914-13328933 | None:intergenic | 35.0% |
! | CAAATTTGGCTGCAAGATTT+TGG | + | chr5.4:13330627-13330646 | MS.gene59447:intron | 35.0% |
! | CAGTGACACCTTTAAGTTAA+TGG | - | chr5.4:13330275-13330294 | None:intergenic | 35.0% |
! | CCAATTTTATAAGCAGCTGA+AGG | - | chr5.4:13331233-13331252 | None:intergenic | 35.0% |
! | GAACGTTGATAAGACAACAT+AGG | - | chr5.4:13331074-13331093 | None:intergenic | 35.0% |
! | GAGTTCTAGTTACTCCATAA+AGG | + | chr5.4:13331715-13331734 | MS.gene59447:intron | 35.0% |
! | GGTCTTTCTGGGTAAAATTT+TGG | + | chr5.4:13332934-13332953 | MS.gene59447:intron | 35.0% |
! | GTTAACTAACTTGGTCTTTC+TGG | + | chr5.4:13332922-13332941 | MS.gene59447:intron | 35.0% |
! | TACAAAGTCAGAGACTAGTT+TGG | + | chr5.4:13328333-13328352 | MS.gene59447:intron | 35.0% |
! | TACAGATTTGTTCCACCAAT+CGG | + | chr5.4:13333169-13333188 | MS.gene59447:CDS | 35.0% |
! | TGGCTTGGAATTTATTTGCA+GGG | + | chr5.4:13333100-13333119 | MS.gene59447:intron | 35.0% |
! | TTAGAAGTTTGGGATCTACA+AGG | + | chr5.4:13331109-13331128 | MS.gene59447:intron | 35.0% |
! | TTCTTTAAGAAACTATGCCC+AGG | - | chr5.4:13332497-13332516 | None:intergenic | 35.0% |
!! | ATTTTGGTCCTGACTTTGTA+GGG | + | chr5.4:13328072-13328091 | MS.gene59447:intron | 35.0% |
!! | CATTTTGCTTTAGATTGGGT+TGG | + | chr5.4:13332725-13332744 | MS.gene59447:intron | 35.0% |
!! | GCATGTTGGTTTATAAACGT+GGG | + | chr5.4:13332565-13332584 | MS.gene59447:intron | 35.0% |
!! | TTGGCTTGGAATTTATTTGC+AGG | + | chr5.4:13333099-13333118 | MS.gene59447:intron | 35.0% |
!!! | CGATTGATGATTTGTTTTCC+TGG | + | chr5.4:13332476-13332495 | MS.gene59447:intron | 35.0% |
!!! | GCTTCACATTTTGAAGCATT+AGG | + | chr5.4:13330117-13330136 | MS.gene59447:CDS | 35.0% |
!!! | GGCTATGGTTTTTTAGAGTT+TGG | + | chr5.4:13329353-13329372 | MS.gene59447:intron | 35.0% |
!!! | TAGAATCATCCTTTTTGGCT+TGG | + | chr5.4:13333085-13333104 | MS.gene59447:intron | 35.0% |
AAGATGATTCAGACAAAGCG+AGG | - | chr5.4:13330333-13330352 | None:intergenic | 40.0% | |
ACCAATTCTCAGACCTTTCA+AGG | - | chr5.4:13330034-13330053 | None:intergenic | 40.0% | |
AGGGAGATGGTTAAAACCTA+AGG | + | chr5.4:13332354-13332373 | MS.gene59447:intron | 40.0% | |
AGGGATGGAGAAAAAGACTA+AGG | + | chr5.4:13328600-13328619 | MS.gene59447:intron | 40.0% | |
ATACTTCTCCATGCAATTGC+TGG | + | chr5.4:13329710-13329729 | MS.gene59447:CDS | 40.0% | |
ATATTACAAACGAGCACAGC+AGG | + | chr5.4:13330800-13330819 | MS.gene59447:CDS | 40.0% | |
ATGAACTTACGTAGGTACCA+GGG | - | chr5.4:13332648-13332667 | None:intergenic | 40.0% | |
CATCATAGTAACCAGCTGAA+AGG | - | chr5.4:13330779-13330798 | None:intergenic | 40.0% | |
CCAATTCTCAGACCTTTCAA+GGG | - | chr5.4:13330033-13330052 | None:intergenic | 40.0% | |
CTAGCTCATCAGCATAAACT+TGG | - | chr5.4:13330535-13330554 | None:intergenic | 40.0% | |
CTATGATGGTATTAGGTCAG+TGG | + | chr5.4:13330366-13330385 | MS.gene59447:intron | 40.0% | |
CTGCACCATAAAGCAATTGT+AGG | - | chr5.4:13329102-13329121 | None:intergenic | 40.0% | |
GAACTTGCAGTTACTTAGGA+GGG | + | chr5.4:13332587-13332606 | MS.gene59447:intron | 40.0% | |
GAGAGAGATTATAGAGGATC+TGG | + | chr5.4:13329200-13329219 | MS.gene59447:intron | 40.0% | |
GAGCTTACGTATTACACTGT+TGG | + | chr5.4:13332853-13332872 | MS.gene59447:intron | 40.0% | |
GATCGCCTACAATTGCTTTA+TGG | + | chr5.4:13329094-13329113 | MS.gene59447:intron | 40.0% | |
GATTGGTGCAGCATTTAATG+AGG | + | chr5.4:13332223-13332242 | MS.gene59447:CDS | 40.0% | |
GCAGGAGTTCAACATTTGTT+TGG | + | chr5.4:13329037-13329056 | MS.gene59447:intron | 40.0% | |
GGCGATATCAAAATAAGGGA+TGG | + | chr5.4:13328585-13328604 | MS.gene59447:intron | 40.0% | |
GTATCTTAACATGTGCCTTG+AGG | + | chr5.4:13328015-13328034 | MS.gene59447:intron | 40.0% | |
GTGAAGAGAGTTAAGGAGTT+GGG | + | chr5.4:13327590-13327609 | MS.gene59447:CDS | 40.0% | |
GTTTGTTCTCTGTATGTTGG+TGG | + | chr5.4:13329327-13329346 | MS.gene59447:intron | 40.0% | |
TACCTCAAAACCTAACCCTT+TGG | - | chr5.4:13330582-13330601 | None:intergenic | 40.0% | |
TAGAGAGATTGTAGAGGATC+CGG | + | chr5.4:13329144-13329163 | MS.gene59447:intron | 40.0% | |
TAGGTAAATGTCAACCTAGC+TGG | + | chr5.4:13332128-13332147 | MS.gene59447:intron | 40.0% | |
TATCATGACCAGCAATTGCA+TGG | - | chr5.4:13329721-13329740 | None:intergenic | 40.0% | |
TATGAACTTACGTAGGTACC+AGG | - | chr5.4:13332649-13332668 | None:intergenic | 40.0% | |
TATGAGAAGGTTTGAGTGAG+AGG | + | chr5.4:13328953-13328972 | MS.gene59447:intron | 40.0% | |
TATGGACGTGTCTCAAGATT+TGG | + | chr5.4:13329620-13329639 | MS.gene59447:CDS | 40.0% | |
TCATACTTGCTTACTTGAGG+TGG | - | chr5.4:13329753-13329772 | None:intergenic | 40.0% | |
TCTGGGTCAGTTGAAAATTG+TGG | + | chr5.4:13329218-13329237 | MS.gene59447:intron | 40.0% | |
TGAGGAATCACGATGATTGA+TGG | + | chr5.4:13328809-13328828 | MS.gene59447:intron | 40.0% | |
TGCATCACTGTATGCATCAT+CGG | - | chr5.4:13329253-13329272 | None:intergenic | 40.0% | |
TGTCTCGCTATGATGGTATT+AGG | + | chr5.4:13330359-13330378 | MS.gene59447:CDS | 40.0% | |
TGTTGTTGGGAAGACCAATA+TGG | + | chr5.4:13327619-13327638 | MS.gene59447:CDS | 40.0% | |
TTATTGAGAATGGACCGACA+GGG | + | chr5.4:13332180-13332199 | MS.gene59447:CDS | 40.0% | |
TTGCTTAACACGTGCCTTAA+GGG | - | chr5.4:13327903-13327922 | None:intergenic | 40.0% | |
TTTATTGAGAATGGACCGAC+AGG | + | chr5.4:13332179-13332198 | MS.gene59447:CDS | 40.0% | |
! | ACGATGATTGATGGTCTACT+TGG | + | chr5.4:13328818-13328837 | MS.gene59447:intron | 40.0% |
! | GTAGGTTTGAAGCCAACATA+TGG | + | chr5.4:13329602-13329621 | MS.gene59447:CDS | 40.0% |
! | TGGTGTTCTTGTTGCTGTTA+AGG | + | chr5.4:13327484-13327503 | MS.gene59447:CDS | 40.0% |
! | TTTGTAGGGCACTCTCAAAT+AGG | + | chr5.4:13328086-13328105 | MS.gene59447:intron | 40.0% |
!! | AAAGTCAGAGACTAGTTTGG+TGG | + | chr5.4:13328336-13328355 | MS.gene59447:intron | 40.0% |
!! | AAGAAGAAGCTCTAAACCAC+TGG | - | chr5.4:13332004-13332023 | None:intergenic | 40.0% |
!! | AAGAGCATTAATGAGGGAGA+TGG | + | chr5.4:13332341-13332360 | MS.gene59447:intron | 40.0% |
!! | AATGTTAACTTGTGCCCTCA+AGG | - | chr5.4:13328033-13328052 | None:intergenic | 40.0% |
!! | AGAAGAAGCTCTAAACCACT+GGG | - | chr5.4:13332003-13332022 | None:intergenic | 40.0% |
!! | ATTGAAGATGGTGTTGATGC+TGG | + | chr5.4:13330069-13330088 | MS.gene59447:CDS | 40.0% |
!! | CATTTTGGTCCTGACTTTGT+AGG | + | chr5.4:13328071-13328090 | MS.gene59447:intron | 40.0% |
!! | CGCATGTTGGTTTATAAACG+TGG | + | chr5.4:13332564-13332583 | MS.gene59447:intron | 40.0% |
AAAGCGAGGACATAGTATGC+TGG | - | chr5.4:13330319-13330338 | None:intergenic | 45.0% | |
AAGAGAGTTAAGGAGTTGGG+TGG | + | chr5.4:13327593-13327612 | MS.gene59447:CDS | 45.0% | |
ACAACACCGCAAAAAGATGC+CGG | - | chr5.4:13329584-13329603 | None:intergenic | 45.0% | |
ACCATCATAGCGAGACAAGT+TGG | - | chr5.4:13330356-13330375 | None:intergenic | 45.0% | |
AGAGAGATTGTAGAGGATCC+GGG | + | chr5.4:13329145-13329164 | MS.gene59447:intron | 45.0% | |
AGAGAGTTAAGGAGTTGGGT+GGG | + | chr5.4:13327594-13327613 | MS.gene59447:CDS | 45.0% | |
AGGCAGTGTGTTGTATCGTT+GGG | + | chr5.4:13329530-13329549 | MS.gene59447:CDS | 45.0% | |
ATAACTAGTTGTGCACCCAG+TGG | + | chr5.4:13331985-13332004 | MS.gene59447:intron | 45.0% | |
ATGCTGCACCAATCATTTGC+AGG | - | chr5.4:13332217-13332236 | None:intergenic | 45.0% | |
ATTAGGATGCTCTGTGAACG+AGG | + | chr5.4:13330134-13330153 | MS.gene59447:CDS | 45.0% | |
ATTCCAGGGACAATCAATCC+TGG | - | chr5.4:13332411-13332430 | None:intergenic | 45.0% | |
CAAAACCTAACCCTTTGGCT+CGG | - | chr5.4:13330577-13330596 | None:intergenic | 45.0% | |
CACTGAACTTCATGTTGACG+AGG | + | chr5.4:13332268-13332287 | MS.gene59447:intron | 45.0% | |
CATGTTAACCTGTGCCCTTA+AGG | + | chr5.4:13327886-13327905 | MS.gene59447:intron | 45.0% | |
CCCTTGAAAGGTCTGAGAAT+TGG | + | chr5.4:13330030-13330049 | MS.gene59447:CDS | 45.0% | |
CGAGGATACTTGAGGGTTAT+CGG | + | chr5.4:13327546-13327565 | MS.gene59447:CDS | 45.0% | |
CTCAGTTTACATGAGCATGC+CGG | + | chr5.4:13332064-13332083 | MS.gene59447:intron | 45.0% | |
CTGAAAAGCAGAAGCTTCAG+TGG | - | chr5.4:13327666-13327685 | None:intergenic | 45.0% | |
CTTGAGACACGTCCATATGT+TGG | - | chr5.4:13329617-13329636 | None:intergenic | 45.0% | |
GAGGAAATTGGTCCTCTTTC+TGG | + | chr5.4:13327464-13327483 | MS.gene59447:CDS | 45.0% | |
GAGTGAGAGGTGACAATATG+TGG | + | chr5.4:13328966-13328985 | MS.gene59447:intron | 45.0% | |
GAGTGGATGTATATCGTGTC+TGG | - | chr5.4:13330968-13330987 | None:intergenic | 45.0% | |
GATCCTTTGGCTATGTATGC+TGG | + | chr5.4:13331351-13331370 | MS.gene59447:CDS | 45.0% | |
GATGAGCTAGACTCTCTCTA+TGG | + | chr5.4:13330545-13330564 | MS.gene59447:CDS | 45.0% | |
GCAACAAGAACACCAGAAAG+AGG | - | chr5.4:13327479-13327498 | None:intergenic | 45.0% | |
GCATCACTGTATGCATCATC+GGG | - | chr5.4:13329252-13329271 | None:intergenic | 45.0% | |
GGAACTTGCAGTTACTTAGG+AGG | + | chr5.4:13332586-13332605 | MS.gene59447:intron | 45.0% | |
GGAGTGTGTAAGAGTAGCTT+GGG | - | chr5.4:13327240-13327259 | None:intergenic | 45.0% | |
GGCATAAACCAGCAGTTATG+TGG | - | chr5.4:13331583-13331602 | None:intergenic | 45.0% | |
GGTGAAGAGAGTTAAGGAGT+TGG | + | chr5.4:13327589-13327608 | MS.gene59447:CDS | 45.0% | |
GTATCGTTGGGAAGTGATAC+TGG | + | chr5.4:13329542-13329561 | MS.gene59447:CDS | 45.0% | |
GTGGGAACTTGCAGTTACTT+AGG | + | chr5.4:13332583-13332602 | MS.gene59447:intron | 45.0% | |
GTTGCTTAACACGTGCCTTA+AGG | - | chr5.4:13327904-13327923 | None:intergenic | 45.0% | |
TCACCAGCATACATAGCCAA+AGG | - | chr5.4:13331357-13331376 | None:intergenic | 45.0% | |
TCAGTTTACATGAGCATGCC+GGG | + | chr5.4:13332065-13332084 | MS.gene59447:intron | 45.0% | |
TCCAACTTGTCTCGCTATGA+TGG | + | chr5.4:13330352-13330371 | MS.gene59447:CDS | 45.0% | |
TGAACTTACGTAGGTACCAG+GGG | - | chr5.4:13332647-13332666 | None:intergenic | 45.0% | |
TGGAGTGTGTAAGAGTAGCT+TGG | - | chr5.4:13327241-13327260 | None:intergenic | 45.0% | |
TGTTCGGTTGTGTGTGTACT+TGG | - | chr5.4:13330426-13330445 | None:intergenic | 45.0% | |
TTCCAGGGACAATCAATCCT+GGG | - | chr5.4:13332410-13332429 | None:intergenic | 45.0% | |
TTGGGCTAAGAAGACTTGAG+AGG | - | chr5.4:13330870-13330889 | None:intergenic | 45.0% | |
TTTATGGTGCAGTCTCCGTA+GGG | + | chr5.4:13329110-13329129 | MS.gene59447:intron | 45.0% | |
! | AAAACCTAACCCTTTGGCTC+GGG | - | chr5.4:13330576-13330595 | None:intergenic | 45.0% |
! | AGCCAAAGGGTTAGGTTTTG+AGG | + | chr5.4:13330577-13330596 | MS.gene59447:CDS | 45.0% |
! | AGTTGGGTGGGATTGTTGTT+GGG | + | chr5.4:13327606-13327625 | MS.gene59447:CDS | 45.0% |
! | CATTGGCTGCTTTGGTTCAT+CGG | + | chr5.4:13329673-13329692 | MS.gene59447:CDS | 45.0% |
! | TTCTCTGTATGTTGGTGGGT+TGG | + | chr5.4:13329332-13329351 | MS.gene59447:intron | 45.0% |
!! | CACTGAAGCTTCTGCTTTTC+AGG | + | chr5.4:13327664-13327683 | MS.gene59447:CDS | 45.0% |
!!! | GCATCTTTTTGCGGTGTTGT+AGG | + | chr5.4:13329584-13329603 | MS.gene59447:CDS | 45.0% |
AAAGAGTGGAACGTGGGGTT+TGG | - | chr5.4:13327193-13327212 | None:intergenic | 50.0% | |
AAGAGGACCAATTTCCTCGC+CGG | - | chr5.4:13327462-13327481 | None:intergenic | 50.0% | |
AAGCGTGAAAGAGTGGAACG+TGG | - | chr5.4:13327200-13327219 | None:intergenic | 50.0% | |
AAGTATCCTCGATCCACCAG+TGG | - | chr5.4:13327537-13327556 | None:intergenic | 50.0% | |
AATAGACGTGGCACGCATGT+TGG | + | chr5.4:13332551-13332570 | MS.gene59447:intron | 50.0% | |
ACGGAGGGTGAGAATTTGAG+AGG | - | chr5.4:13327282-13327301 | None:intergenic | 50.0% | |
AGAGTAGCTTGGGTGGATGA+TGG | - | chr5.4:13327230-13327249 | None:intergenic | 50.0% | |
AGCGTGAAAGAGTGGAACGT+GGG | - | chr5.4:13327199-13327218 | None:intergenic | 50.0% | |
AGGGTGAGAATTTGAGAGGG+GGG | - | chr5.4:13327278-13327297 | None:intergenic | 50.0% | |
ATGGAGATTCCCGAGCCAAA+GGG | + | chr5.4:13330564-13330583 | MS.gene59447:CDS | 50.0% | |
ATGGGAGAGTCCACTAGTGT+GGG | + | chr5.4:13328775-13328794 | MS.gene59447:intron | 50.0% | |
CAACACTAACCCCACACTAG+TGG | - | chr5.4:13328788-13328807 | None:intergenic | 50.0% | |
CAACGATACAACACACTGCC+TGG | - | chr5.4:13329531-13329550 | None:intergenic | 50.0% | |
CAGGCAGTGTGTTGTATCGT+TGG | + | chr5.4:13329529-13329548 | MS.gene59447:CDS | 50.0% | |
CAGTTATGTGGCCTGCTCAA+CGG | - | chr5.4:13331571-13331590 | None:intergenic | 50.0% | |
CCAATCATTTGCAGGCCAAC+AGG | - | chr5.4:13332209-13332228 | None:intergenic | 50.0% | |
CCACATGGTAAAACCAAGGC+AGG | - | chr5.4:13332158-13332177 | None:intergenic | 50.0% | |
CGATGAACCAAAGCAGCCAA+TGG | - | chr5.4:13329675-13329694 | None:intergenic | 50.0% | |
CGGAGGGTGAGAATTTGAGA+GGG | - | chr5.4:13327281-13327300 | None:intergenic | 50.0% | |
CTTTATGGTGCAGTCTCCGT+AGG | + | chr5.4:13329109-13329128 | MS.gene59447:intron | 50.0% | |
GAGGGTGAGAATTTGAGAGG+GGG | - | chr5.4:13327279-13327298 | None:intergenic | 50.0% | |
GAGTAGCTTGGGTGGATGAT+GGG | - | chr5.4:13327229-13327248 | None:intergenic | 50.0% | |
GAGTTGGGTGGGATTGTTGT+TGG | + | chr5.4:13327605-13327624 | MS.gene59447:CDS | 50.0% | |
GCATGAATGCCCATCCAAAC+TGG | - | chr5.4:13328478-13328497 | None:intergenic | 50.0% | |
GCGTCATCACTTGATGCCAT+TGG | + | chr5.4:13329656-13329675 | MS.gene59447:CDS | 50.0% | |
GGAGGGTGAGAATTTGAGAG+GGG | - | chr5.4:13327280-13327299 | None:intergenic | 50.0% | |
GGTGGATCGAGGATACTTGA+GGG | + | chr5.4:13327539-13327558 | MS.gene59447:CDS | 50.0% | |
GTCATGTGCTTGAGCGATGA+GGG | - | chr5.4:13327420-13327439 | None:intergenic | 50.0% | |
GTGTGTAAGAGTAGCTTGGG+TGG | - | chr5.4:13327237-13327256 | None:intergenic | 50.0% | |
TATGGAGATTCCCGAGCCAA+AGG | + | chr5.4:13330563-13330582 | MS.gene59447:CDS | 50.0% | |
TATGGGAGAGTCCACTAGTG+TGG | + | chr5.4:13328774-13328793 | MS.gene59447:intron | 50.0% | |
TCAACGCTATCAGCTCCGAT+TGG | - | chr5.4:13333187-13333206 | None:intergenic | 50.0% | |
TCGTTGGGAAGTGATACTGG+TGG | + | chr5.4:13329545-13329564 | MS.gene59447:CDS | 50.0% | |
TGCTGTGTAGTTGAGACGCA+TGG | - | chr5.4:13331816-13331835 | None:intergenic | 50.0% | |
TTCCCAGGATTGATTGTCCC+TGG | + | chr5.4:13332405-13332424 | MS.gene59447:intron | 50.0% | |
! | CACTAGTGTGGGGTTAGTGT+TGG | + | chr5.4:13328786-13328805 | MS.gene59447:intron | 50.0% |
! | CACTGCCATCCTTTTCGCTT+GGG | + | chr5.4:13330290-13330309 | MS.gene59447:CDS | 50.0% |
! | CCTGTTGGCCTGCAAATGAT+TGG | + | chr5.4:13332206-13332225 | MS.gene59447:CDS | 50.0% |
! | CTTGATGCCATTGGCTGCTT+TGG | + | chr5.4:13329665-13329684 | MS.gene59447:CDS | 50.0% |
! | GTGATACTGGTGGAAGTGTG+AGG | + | chr5.4:13329555-13329574 | MS.gene59447:CDS | 50.0% |
! | TCACTGCCATCCTTTTCGCT+TGG | + | chr5.4:13330289-13330308 | MS.gene59447:CDS | 50.0% |
! | TGGTGGATCGAGGATACTTG+AGG | + | chr5.4:13327538-13327557 | MS.gene59447:CDS | 50.0% |
! | TTGAGCGATGAGGGATTGGT+CGG | - | chr5.4:13327411-13327430 | None:intergenic | 50.0% |
!! | AGTTGGTGAGAAGGGAGTGA+CGG | - | chr5.4:13327301-13327320 | None:intergenic | 50.0% |
!! | GTATGTTGGTGGGTTGGCTA+TGG | + | chr5.4:13329338-13329357 | MS.gene59447:intron | 50.0% |
!! | TGAGAGTGCCCTACAAAGTC+AGG | - | chr5.4:13328083-13328102 | None:intergenic | 50.0% |
!!! | CCTGCCTTGGTTTTACCATG+TGG | + | chr5.4:13332155-13332174 | MS.gene59447:CDS | 50.0% |
AAGCAGCTGAAGGAGCTGCA+GGG | - | chr5.4:13331223-13331242 | None:intergenic | 55.0% | |
AAGGGAGGTGGAGGAAGGAA+CGG | - | chr5.4:13327388-13327407 | None:intergenic | 55.0% | |
AATAGGTGACTGCCAACCCG+TGG | + | chr5.4:13329450-13329469 | MS.gene59447:intron | 55.0% | |
ACGCTATCAGCTCCGATTGG+TGG | - | chr5.4:13333184-13333203 | None:intergenic | 55.0% | |
ACTTGGACGAAGAGAGCGAG+AGG | - | chr5.4:13330409-13330428 | None:intergenic | 55.0% | |
AGGAGGATCATCCGGAGGAT+CGG | + | chr5.4:13329490-13329509 | MS.gene59447:CDS | 55.0% | |
ATAGGTGACTGCCAACCCGT+GGG | + | chr5.4:13329451-13329470 | MS.gene59447:intron | 55.0% | |
ATCCTCGATCCACCAGTGGA+CGG | - | chr5.4:13327533-13327552 | None:intergenic | 55.0% | |
CAACCCGTGGGATGTTTCCA+GGG | + | chr5.4:13329463-13329482 | MS.gene59447:CDS | 55.0% | |
CAGGGAGAGCTGCTGAGAAT+GGG | + | chr5.4:13333118-13333137 | MS.gene59447:intron | 55.0% | |
CTTGGACGAAGAGAGCGAGA+GGG | - | chr5.4:13330408-13330427 | None:intergenic | 55.0% | |
GACGGCGGTGAAGAGAGTTA+AGG | + | chr5.4:13327583-13327602 | MS.gene59447:CDS | 55.0% | |
GAGAATTTGAGAGGGGGGTG+CGG | - | chr5.4:13327273-13327292 | None:intergenic | 55.0% | |
GAGATTGTAGAGGATCCGGG+TGG | + | chr5.4:13329148-13329167 | MS.gene59447:intron | 55.0% | |
GAGGTGGGATTGGATGAGGT+CGG | - | chr5.4:13327336-13327355 | None:intergenic | 55.0% | |
GATTCCCGAGCCAAAGGGTT+AGG | + | chr5.4:13330569-13330588 | MS.gene59447:CDS | 55.0% | |
GCGTGAAAGAGTGGAACGTG+GGG | - | chr5.4:13327198-13327217 | None:intergenic | 55.0% | |
GGCAACCCAAGCGAAAAGGA+TGG | - | chr5.4:13330298-13330317 | None:intergenic | 55.0% | |
GGGACATATGCCCTTTCAGC+TGG | + | chr5.4:13330765-13330784 | MS.gene59447:CDS | 55.0% | |
GGTCATGTGCTTGAGCGATG+AGG | - | chr5.4:13327421-13327440 | None:intergenic | 55.0% | |
GTGCTTGAGCGATGAGGGAT+TGG | - | chr5.4:13327415-13327434 | None:intergenic | 55.0% | |
GTTCATCGGTCGCTGATGCT+GGG | + | chr5.4:13329687-13329706 | MS.gene59447:CDS | 55.0% | |
TAAGCAGCTGAAGGAGCTGC+AGG | - | chr5.4:13331224-13331243 | None:intergenic | 55.0% | |
TGAGCAGGCCACATAACTGC+TGG | + | chr5.4:13331572-13331591 | MS.gene59447:intron | 55.0% | |
TGCTGGCAACCCAAGCGAAA+AGG | - | chr5.4:13330302-13330321 | None:intergenic | 55.0% | |
TGGGAGAGTCCACTAGTGTG+GGG | + | chr5.4:13328776-13328795 | MS.gene59447:intron | 55.0% | |
TTCACCGCCGTCGCATCAAA+CGG | - | chr5.4:13327575-13327594 | None:intergenic | 55.0% | |
TTGGACGAAGAGAGCGAGAG+GGG | - | chr5.4:13330407-13330426 | None:intergenic | 55.0% | |
! | AACACGTGCCTTAAGGGCAC+AGG | - | chr5.4:13327897-13327916 | None:intergenic | 55.0% |
! | AAGAGAGCGAGAGGGGTACA+TGG | - | chr5.4:13330400-13330419 | None:intergenic | 55.0% |
! | AGAGAGCGAGAGGGGTACAT+GGG | - | chr5.4:13330399-13330418 | None:intergenic | 55.0% |
! | AGGCAGCCGGCATCTTTTTG+CGG | + | chr5.4:13329575-13329594 | MS.gene59447:CDS | 55.0% |
! | GAGGGAGAAGCGTGAAAGAG+TGG | - | chr5.4:13327207-13327226 | None:intergenic | 55.0% |
!! | AGAGCTTTGAGCCGTTGAGC+AGG | + | chr5.4:13331557-13331576 | MS.gene59447:intron | 55.0% |
!! | AGCTTGGGTGGATGATGGGA+GGG | - | chr5.4:13327225-13327244 | None:intergenic | 55.0% |
!! | CGATGAGGGATTGGTCGGAA+GGG | - | chr5.4:13327406-13327425 | None:intergenic | 55.0% |
!! | GGAGAGGGAGTTGGTGAGAA+GGG | - | chr5.4:13327309-13327328 | None:intergenic | 55.0% |
!! | GTGTGGGGTTAGTGTTGGTG+AGG | + | chr5.4:13328791-13328810 | MS.gene59447:intron | 55.0% |
!! | TAGCTTGGGTGGATGATGGG+AGG | - | chr5.4:13327226-13327245 | None:intergenic | 55.0% |
ACGTCTGACATGCCGTCCAC+TGG | + | chr5.4:13327518-13327537 | MS.gene59447:CDS | 60.0% | |
AGCAGCTGAAGGAGCTGCAG+GGG | - | chr5.4:13331222-13331241 | None:intergenic | 60.0% | |
AGGATCATCCGGAGGATCGG+CGG | + | chr5.4:13329493-13329512 | MS.gene59447:CDS | 60.0% | |
AGGCCAACAGGAAGCCCTGT+CGG | - | chr5.4:13332197-13332216 | None:intergenic | 60.0% | |
ATCGCTGCCGGCGAGGAAAT+TGG | + | chr5.4:13327452-13327471 | MS.gene59447:CDS | 60.0% | |
ATTGGTCGGAAGGGAGGTGG+AGG | - | chr5.4:13327397-13327416 | None:intergenic | 60.0% | |
CCAACCCGTGGGATGTTTCC+AGG | + | chr5.4:13329462-13329481 | MS.gene59447:CDS | 60.0% | |
CCAAGGCAGGTAGTCCAGCT+AGG | - | chr5.4:13332145-13332164 | None:intergenic | 60.0% | |
CCTACAGAGACTGCACCACC+CGG | - | chr5.4:13329166-13329185 | None:intergenic | 60.0% | |
CCTAGCTGGACTACCTGCCT+TGG | + | chr5.4:13332142-13332161 | MS.gene59447:CDS | 60.0% | |
CCTGGAAACATCCCACGGGT+TGG | - | chr5.4:13329465-13329484 | None:intergenic | 60.0% | |
CGGGTGGTGCAGTCTCTGTA+GGG | + | chr5.4:13329164-13329183 | MS.gene59447:intron | 60.0% | |
CTAGACCGCAGAATCGCTGC+CGG | + | chr5.4:13327440-13327459 | MS.gene59447:CDS | 60.0% | |
GAAGGAACGGAGGTGGGGTT+CGG | - | chr5.4:13327375-13327394 | None:intergenic | 60.0% | |
GATCCTCCGGATGATCCTCC+TGG | - | chr5.4:13329491-13329510 | None:intergenic | 60.0% | |
GCACCCTGGAAACATCCCAC+GGG | - | chr5.4:13329469-13329488 | None:intergenic | 60.0% | |
GCAGGGAGAGCTGCTGAGAA+TGG | + | chr5.4:13333117-13333136 | MS.gene59447:intron | 60.0% | |
GGATTGGATGAGGTCGGTGG+CGG | - | chr5.4:13327330-13327349 | None:intergenic | 60.0% | |
GGCACCCTGGAAACATCCCA+CGG | - | chr5.4:13329470-13329489 | None:intergenic | 60.0% | |
GGGTGAGGTGGGATTGGATG+AGG | - | chr5.4:13327340-13327359 | None:intergenic | 60.0% | |
GGTTCATCGGTCGCTGATGC+TGG | + | chr5.4:13329686-13329705 | MS.gene59447:CDS | 60.0% | |
GTGGAGGAAGGAACGGAGGT+GGG | - | chr5.4:13327381-13327400 | None:intergenic | 60.0% | |
GTGGGATTGGATGAGGTCGG+TGG | - | chr5.4:13327333-13327352 | None:intergenic | 60.0% | |
TCGGCCTCCGTTTGATGCGA+CGG | + | chr5.4:13327565-13327584 | MS.gene59447:CDS | 60.0% | |
TCTGACATGCCGTCCACTGG+TGG | + | chr5.4:13327521-13327540 | MS.gene59447:CDS | 60.0% | |
TGGAGGAAGGAACGGAGGTG+GGG | - | chr5.4:13327380-13327399 | None:intergenic | 60.0% | |
TGGTGAGAAGGGAGTGACGG+AGG | - | chr5.4:13327298-13327317 | None:intergenic | 60.0% | |
! | AATTTGAGAGGGGGGTGCGG+TGG | - | chr5.4:13327270-13327289 | None:intergenic | 60.0% |
! | AGGGTGCCAGGAGGATCATC+CGG | + | chr5.4:13329482-13329501 | MS.gene59447:CDS | 60.0% |
! | GAGAGCGAGAGGGGTACATG+GGG | - | chr5.4:13330398-13330417 | None:intergenic | 60.0% |
! | GATGTTTCCAGGGTGCCAGG+AGG | + | chr5.4:13329473-13329492 | MS.gene59447:CDS | 60.0% |
! | GGAACGTGGGGTTTGGAGTG+TGG | - | chr5.4:13327186-13327205 | None:intergenic | 60.0% |
! | GGTGAGAAGGGAGTGACGGA+GGG | - | chr5.4:13327297-13327316 | None:intergenic | 60.0% |
! | TGGGATGTTTCCAGGGTGCC+AGG | + | chr5.4:13329470-13329489 | MS.gene59447:CDS | 60.0% |
! | TGGTGGAAGTGTGAGGCAGC+CGG | + | chr5.4:13329562-13329581 | MS.gene59447:CDS | 60.0% |
!! | CGGAGAGGGAGTTGGTGAGA+AGG | - | chr5.4:13327310-13327329 | None:intergenic | 60.0% |
!! | GCGATGAGGGATTGGTCGGA+AGG | - | chr5.4:13327407-13327426 | None:intergenic | 60.0% |
!! | TGAGGGATTGGTCGGAAGGG+AGG | - | chr5.4:13327403-13327422 | None:intergenic | 60.0% |
AACTGCAGCCGCCGATCCTC+CGG | - | chr5.4:13329504-13329523 | None:intergenic | 65.0% | |
ACCGCCGTCGCATCAAACGG+AGG | - | chr5.4:13327572-13327591 | None:intergenic | 65.0% | |
CCGGGTGGTGCAGTCTCTGT+AGG | + | chr5.4:13329163-13329182 | MS.gene59447:intron | 65.0% | |
CGGCAGCGATTCTGCGGTCT+AGG | - | chr5.4:13327442-13327461 | None:intergenic | 65.0% | |
GCCTCCGTTTGATGCGACGG+CGG | + | chr5.4:13327568-13327587 | MS.gene59447:CDS | 65.0% | |
GGACCGACAGGGCTTCCTGT+TGG | + | chr5.4:13332191-13332210 | MS.gene59447:CDS | 65.0% | |
GGAGGTGGAGGAAGGAACGG+AGG | - | chr5.4:13327385-13327404 | None:intergenic | 65.0% | |
GGATGATCCTCCTGGCACCC+TGG | - | chr5.4:13329483-13329502 | None:intergenic | 65.0% | |
GGTGGAGGAAGGAACGGAGG+TGG | - | chr5.4:13327382-13327401 | None:intergenic | 65.0% | |
GTCGGAAGGGAGGTGGAGGA+AGG | - | chr5.4:13327393-13327412 | None:intergenic | 65.0% | |
GTGCCAGGAGGATCATCCGG+AGG | + | chr5.4:13329485-13329504 | MS.gene59447:CDS | 65.0% | |
! | TGCCGTCCACTGGTGGATCG+AGG | + | chr5.4:13327528-13327547 | MS.gene59447:CDS | 65.0% |
!! | GATGAGGTCGGTGGCGGAGA+GGG | - | chr5.4:13327324-13327343 | None:intergenic | 65.0% |
!! | GGAGGTGGGGTTCGGTGAGA+CGG | - | chr5.4:13327367-13327386 | None:intergenic | 65.0% |
!! | GGGATTGGTCGGAAGGGAGG+TGG | - | chr5.4:13327400-13327419 | None:intergenic | 65.0% |
CCTCGCCGGCAGCGATTCTG+CGG | - | chr5.4:13327448-13327467 | None:intergenic | 70.0% | |
CGGCGGCTGCAGTTTCTGCC+AGG | + | chr5.4:13329510-13329529 | MS.gene59447:CDS | 70.0% | |
GAGACGGAGGCGGGTGAGGT+GGG | - | chr5.4:13327351-13327370 | None:intergenic | 70.0% | |
GGAGGCGGGTGAGGTGGGAT+TGG | - | chr5.4:13327346-13327365 | None:intergenic | 70.0% | |
TGAGACGGAGGCGGGTGAGG+TGG | - | chr5.4:13327352-13327371 | None:intergenic | 70.0% | |
!! | GGATGAGGTCGGTGGCGGAG+AGG | - | chr5.4:13327325-13327344 | None:intergenic | 70.0% |
!! | GGGGTTCGGTGAGACGGAGG+CGG | - | chr5.4:13327361-13327380 | None:intergenic | 70.0% |
!! | GGGTTCGGTGAGACGGAGGC+GGG | - | chr5.4:13327360-13327379 | None:intergenic | 70.0% |
!! | GGTGGGGTTCGGTGAGACGG+AGG | - | chr5.4:13327364-13327383 | None:intergenic | 70.0% |
!! | GTCGGTGGCGGAGAGGGAGT+TGG | - | chr5.4:13327318-13327337 | None:intergenic | 70.0% |
CCGCAGAATCGCTGCCGGCG+AGG | + | chr5.4:13327445-13327464 | MS.gene59447:CDS | 75.0% | |
CGGTGAGACGGAGGCGGGTG+AGG | - | chr5.4:13327355-13327374 | None:intergenic | 75.0% | |
! | GGGGGGTGCGGTGGTGAGTG+TGG | - | chr5.4:13327261-13327280 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 13327170 | 13333210 | 13327170 | ID=MS.gene59447 |
chr5.4 | mRNA | 13327170 | 13333210 | 13327170 | ID=MS.gene59447.t1;Parent=MS.gene59447 |
chr5.4 | exon | 13327170 | 13327685 | 13327170 | ID=MS.gene59447.t1.exon1;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13327170 | 13327685 | 13327170 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13329455 | 13329766 | 13329455 | ID=MS.gene59447.t1.exon2;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13329455 | 13329766 | 13329455 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13329976 | 13330155 | 13329976 | ID=MS.gene59447.t1.exon3;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13329976 | 13330155 | 13329976 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13330286 | 13330380 | 13330286 | ID=MS.gene59447.t1.exon4;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13330286 | 13330380 | 13330286 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13330523 | 13330598 | 13330523 | ID=MS.gene59447.t1.exon5;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13330523 | 13330598 | 13330523 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13330744 | 13330821 | 13330744 | ID=MS.gene59447.t1.exon6;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13330744 | 13330821 | 13330744 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13331158 | 13331251 | 13331158 | ID=MS.gene59447.t1.exon7;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13331158 | 13331251 | 13331158 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13331337 | 13331386 | 13331337 | ID=MS.gene59447.t1.exon8;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13331337 | 13331386 | 13331337 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13332131 | 13332244 | 13332131 | ID=MS.gene59447.t1.exon9;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13332131 | 13332244 | 13332131 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
chr5.4 | exon | 13333121 | 13333210 | 13333121 | ID=MS.gene59447.t1.exon10;Parent=MS.gene59447.t1 |
chr5.4 | CDS | 13333121 | 13333210 | 13333121 | ID=cds.MS.gene59447.t1;Parent=MS.gene59447.t1 |
Gene Sequence |
Protein sequence |