AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59575


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59575.t1 MTR_8g027870 94.118 289 17 0 1 289 21 309 0.0 569
MS.gene59575.t1 MTR_8g027885 91.696 289 24 0 1 289 21 309 0.0 555
MS.gene59575.t1 MTR_7g117170 56.711 298 117 4 1 289 18 312 2.23e-113 336
MS.gene59575.t1 MTR_8g009055 42.617 298 159 4 1 289 9 303 1.01e-76 241
MS.gene59575.t1 MTR_8g009050 42.617 298 159 4 1 289 9 303 1.27e-75 238
MS.gene59575.t1 MTR_8g009063 41.554 296 165 4 1 289 16 310 1.92e-75 238
MS.gene59575.t1 MTR_0184s0040 41.077 297 166 4 1 289 24 319 2.54e-75 238
MS.gene59575.t1 MTR_0078s0190 41.077 297 166 4 1 289 24 319 2.54e-75 238
MS.gene59575.t1 MTR_8g008990 42.373 295 164 3 1 289 9 303 4.49e-75 237
MS.gene59575.t1 MTR_7g047030 39.933 298 170 4 1 290 9 305 1.27e-72 231
MS.gene59575.t1 MTR_7g047270 39.933 298 170 4 1 290 9 305 1.27e-72 231
MS.gene59575.t1 MTR_0078s0010 40.067 297 169 5 1 289 9 304 2.62e-70 225
MS.gene59575.t1 MTR_1g019510 40.878 296 165 4 1 289 9 301 3.47e-69 222
MS.gene59575.t1 MTR_6g023665 42.034 295 164 7 1 289 16 309 9.86e-69 221
MS.gene59575.t1 MTR_0078s0060 40.203 296 169 4 1 289 9 303 3.09e-68 219
MS.gene59575.t1 MTR_6g005600 40.541 296 168 4 1 289 9 303 5.19e-67 216
MS.gene59575.t1 MTR_0078s0200 37.884 293 174 3 5 289 13 305 8.77e-67 211
MS.gene59575.t1 MTR_6g488280 41.216 296 165 7 1 289 9 302 2.94e-66 214
MS.gene59575.t1 MTR_0428s0010 41.216 296 165 7 1 289 9 302 2.94e-66 214
MS.gene59575.t1 MTR_8g009073 37.966 295 177 3 1 289 9 303 9.29e-66 213
MS.gene59575.t1 MTR_8g009067 39.865 296 170 4 1 289 9 303 4.81e-65 211
MS.gene59575.t1 MTR_0184s0030 37.884 293 174 3 5 289 13 305 9.23e-65 210
MS.gene59575.t1 MTR_8g008970 39.865 296 170 4 1 289 9 303 3.07e-64 215
MS.gene59575.t1 MTR_8g008970 39.623 106 54 3 178 276 527 629 8.37e-14 72.0
MS.gene59575.t1 MTR_8g465670 39.661 295 170 6 1 289 10 302 7.11e-64 208
MS.gene59575.t1 MTR_8g006270 38.176 296 168 6 4 290 12 301 6.66e-63 206
MS.gene59575.t1 MTR_8g006260 38.176 296 167 5 5 287 13 305 1.49e-62 205
MS.gene59575.t1 MTR_8g006220 38.983 295 172 6 1 289 9 301 1.06e-61 202
MS.gene59575.t1 MTR_8g006730 39.597 298 169 8 1 289 9 304 2.43e-60 199
MS.gene59575.t1 MTR_8g006710 37.374 297 176 6 1 289 9 303 1.66e-59 196
MS.gene59575.t1 MTR_8g077590 39.731 297 163 8 5 290 16 307 1.74e-58 194
MS.gene59575.t1 MTR_7g046490 39.932 293 171 3 1 289 9 300 1.56e-57 191
MS.gene59575.t1 MTR_8g012745 39.000 300 164 7 5 290 13 307 1.30e-56 189
MS.gene59575.t1 MTR_8g012635 39.731 297 166 6 5 290 13 307 2.66e-56 188
MS.gene59575.t1 MTR_8g074550 37.542 301 173 6 1 289 11 308 5.91e-56 188
MS.gene59575.t1 MTR_8g012650 39.661 295 169 5 5 290 13 307 1.52e-54 184
MS.gene59575.t1 MTR_6g005660 38.057 247 146 3 1 240 9 255 1.49e-48 162
MS.gene59575.t1 MTR_8g006230 37.879 198 120 1 95 289 48 245 3.54e-45 154
MS.gene59575.t1 MTR_5g019580 35.144 313 170 10 1 290 10 312 2.73e-44 157
MS.gene59575.t1 MTR_8g009067 41.622 185 102 3 110 289 2 185 6.26e-44 153
MS.gene59575.t1 MTR_8g009073 40.698 172 98 2 122 289 3 174 1.94e-43 151
MS.gene59575.t1 MTR_3g009510 30.719 306 195 6 1 290 8 312 5.86e-42 150
MS.gene59575.t1 MTR_6g033675 30.968 310 192 7 1 291 7 313 1.82e-39 144
MS.gene59575.t1 MTR_6g033625 30.159 315 188 8 1 291 7 313 9.58e-38 139
MS.gene59575.t1 MTR_2g046820 34.437 302 173 10 4 289 11 303 4.41e-37 137
MS.gene59575.t1 MTR_5g019580 33.866 313 146 12 1 290 62 336 2.22e-36 136
MS.gene59575.t1 MTR_6g033660 29.841 315 188 7 1 291 7 312 2.39e-36 135
MS.gene59575.t1 MTR_6g033725 29.260 311 193 6 1 291 7 310 9.21e-36 134
MS.gene59575.t1 MTR_2g040530 32.353 306 176 10 4 289 11 305 9.86e-36 134
MS.gene59575.t1 MTR_2g046750 32.248 307 178 10 4 290 11 307 1.09e-35 133
MS.gene59575.t1 MTR_5g098930 32.667 300 184 9 2 290 9 301 6.47e-34 129
MS.gene59575.t1 MTR_5g090700 32.704 318 171 11 1 290 8 310 2.16e-32 125
MS.gene59575.t1 MTR_5g070090 34.323 303 175 13 2 286 15 311 2.63e-32 124
MS.gene59575.t1 MTR_8g012630 31.313 297 143 9 1 290 9 251 1.11e-31 122
MS.gene59575.t1 MTR_5g070040 31.475 305 187 9 2 289 15 314 3.59e-31 121
MS.gene59575.t1 MTR_6g033615 29.276 304 191 6 1 291 7 299 3.79e-31 121
MS.gene59575.t1 MTR_5g090630 31.000 300 187 10 2 290 9 299 7.25e-31 120
MS.gene59575.t1 MTR_5g090600 32.450 302 185 9 2 290 9 304 2.34e-30 119
MS.gene59575.t1 MTR_5g090670 32.468 308 183 12 2 290 9 310 1.08e-29 117
MS.gene59575.t1 MTR_5g090620 31.250 304 190 9 2 290 9 308 2.69e-29 116
MS.gene59575.t1 MTR_5g090660 32.343 303 184 11 3 290 10 306 6.21e-29 115
MS.gene59575.t1 MTR_5g090580 31.250 304 190 9 2 290 9 308 5.30e-26 107
MS.gene59575.t1 MTR_7g013180 28.754 313 185 11 2 291 9 306 1.11e-25 105
MS.gene59575.t1 MTR_4g095008 28.618 304 181 10 8 289 21 310 3.56e-25 105
MS.gene59575.t1 MTR_3g008010 27.928 333 187 10 1 291 13 334 4.53e-24 101
MS.gene59575.t1 MTR_8g012730 35.443 158 84 2 134 290 4 144 9.15e-24 98.6
MS.gene59575.t1 MTR_5g090610 26.645 304 192 9 1 290 8 294 1.18e-23 100
MS.gene59575.t1 MTR_4g094220 30.154 325 185 12 3 289 12 332 2.06e-23 99.8
MS.gene59575.t1 MTR_4g094920 26.531 294 200 7 8 289 36 325 2.06e-22 97.1
MS.gene59575.t1 MTR_0036s0220 28.135 327 188 11 3 291 17 334 2.72e-22 96.7
MS.gene59575.t1 MTR_3g009520 28.800 250 155 8 1 230 9 255 5.01e-22 93.2
MS.gene59575.t1 MTR_6g014290 27.439 328 195 9 1 291 13 334 1.10e-21 94.7
MS.gene59575.t1 MTR_6g038240 26.115 314 192 11 1 290 14 311 2.09e-21 94.0
MS.gene59575.t1 MTR_6g078320 28.662 314 195 8 2 289 15 325 8.20e-21 92.4
MS.gene59575.t1 MTR_3g069710 30.476 315 168 17 1 289 15 304 8.86e-21 92.0
MS.gene59575.t1 MTR_6g038300 23.567 314 200 9 1 290 14 311 1.09e-20 91.7
MS.gene59575.t1 MTR_5g464810 29.141 326 188 11 2 291 16 334 1.45e-20 91.7
MS.gene59575.t1 MTR_5g064240 29.141 326 188 11 2 291 16 334 1.45e-20 91.7
MS.gene59575.t1 MTR_5g464760 28.659 328 187 12 3 291 17 336 1.81e-20 91.3
MS.gene59575.t1 MTR_3g009500 25.806 248 165 5 1 230 8 254 1.90e-20 89.0
MS.gene59575.t1 MTR_5g031840 28.037 321 189 12 1 289 8 318 4.72e-20 90.1
MS.gene59575.t1 MTR_6g038220 25.466 322 183 10 1 290 14 310 4.99e-20 89.7
MS.gene59575.t1 MTR_6g014250 26.444 329 197 10 1 291 13 334 2.22e-19 88.2
MS.gene59575.t1 MTR_8g059425 26.866 335 184 10 3 291 15 334 5.61e-19 87.0
MS.gene59575.t1 MTR_6g038200 24.922 321 187 10 1 290 14 311 8.13e-19 86.3
MS.gene59575.t1 MTR_7g013200 25.325 308 192 10 1 289 8 296 9.03e-19 86.3
MS.gene59575.t1 MTR_4g485640 28.383 303 180 13 6 288 217 502 1.53e-18 85.9
MS.gene59575.t1 MTR_7g013240 25.484 310 186 10 2 289 10 296 1.53e-18 85.5
MS.gene59575.t1 MTR_5g066410 28.435 313 180 10 1 290 1 292 1.56e-18 85.5
MS.gene59575.t1 MTR_6g014220 26.727 333 191 10 1 291 13 334 2.64e-18 85.1
MS.gene59575.t1 MTR_7g013260 26.646 319 174 13 1 289 9 297 2.91e-18 84.7
MS.gene59575.t1 MTR_6g014040 26.586 331 197 11 1 291 13 337 3.94e-18 84.3
MS.gene59575.t1 MTR_6g038230 25.641 312 196 8 1 290 14 311 4.75e-18 84.3
MS.gene59575.t1 MTR_3g031450 26.518 313 184 12 1 291 21 309 5.05e-18 84.0
MS.gene59575.t1 MTR_8g007565 28.707 317 189 11 1 290 10 316 6.19e-18 84.0
MS.gene59575.t1 MTR_4g082820 29.450 309 190 9 1 290 10 309 6.98e-18 83.6
MS.gene59575.t1 MTR_5g072860 26.480 321 180 13 3 289 23 321 7.79e-18 83.6
MS.gene59575.t1 MTR_5g075440 27.508 309 194 11 2 291 14 311 8.57e-18 83.6
MS.gene59575.t1 MTR_5g016480 24.699 332 184 14 1 289 11 319 9.69e-18 83.2
MS.gene59575.t1 MTR_5g031830 27.523 327 185 14 1 289 15 327 1.07e-17 83.2
MS.gene59575.t1 MTR_7g070800 27.653 311 195 11 2 290 12 314 1.16e-17 83.2
MS.gene59575.t1 MTR_6g013680 30.698 215 127 6 99 291 69 283 1.84e-17 82.0
MS.gene59575.t1 MTR_6g013990 29.439 214 129 3 99 291 122 334 2.13e-17 82.4
MS.gene59575.t1 MTR_8g007650 28.391 317 190 11 1 290 10 316 3.89e-17 81.6
MS.gene59575.t1 MTR_5g031860 26.911 327 186 13 1 289 15 326 4.66e-17 81.3
MS.gene59575.t1 MTR_4g485630 27.010 311 196 12 2 290 13 314 6.29e-17 80.9
MS.gene59575.t1 MTR_3g031400 25.484 310 189 11 1 291 21 307 6.33e-17 80.9
MS.gene59575.t1 MTR_6g052375 36.029 136 77 2 158 283 27 162 7.13e-17 79.7
MS.gene59575.t1 MTR_0288s0020 25.466 322 192 9 1 291 13 317 7.64e-17 80.5
MS.gene59575.t1 MTR_7g011470 31.401 207 122 6 99 291 122 322 1.44e-16 79.7
MS.gene59575.t1 MTR_5g090650 27.667 300 173 11 2 290 9 275 1.48e-16 79.0
MS.gene59575.t1 MTR_7g080935 23.642 313 197 10 1 289 14 308 1.95e-16 79.3
MS.gene59575.t1 MTR_5g090690 29.185 233 133 8 65 290 31 238 2.63e-16 78.6
MS.gene59575.t1 MTR_5g072820 27.303 304 186 12 2 287 14 300 2.79e-16 79.0
MS.gene59575.t1 MTR_7g070860 27.010 311 197 11 2 290 13 315 3.15e-16 79.0
MS.gene59575.t1 MTR_8g466240 25.806 310 192 12 2 289 12 305 3.38e-16 78.6
MS.gene59575.t1 MTR_5g035580 25.237 317 187 9 1 290 16 309 3.47e-16 78.6
MS.gene59575.t1 MTR_7g013220 23.701 308 208 9 1 289 8 307 3.47e-16 78.6
MS.gene59575.t1 MTR_4g064987 26.471 306 195 11 1 289 11 303 3.88e-16 78.6
MS.gene59575.t1 MTR_6g014050 33.023 215 122 5 99 291 123 337 4.91e-16 78.2
MS.gene59575.t1 MTR_2g098430 27.010 311 199 14 1 289 9 313 5.50e-16 78.2
MS.gene59575.t1 MTR_6g014186 24.699 332 201 10 1 291 10 333 5.99e-16 77.8
MS.gene59575.t1 MTR_8g090095 24.437 311 190 8 3 290 30 318 7.93e-16 77.8
MS.gene59575.t1 MTR_6g013960 25.455 330 197 9 3 291 15 336 1.09e-15 77.4
MS.gene59575.t1 MTR_4g082810 28.344 314 190 9 1 290 10 312 1.22e-15 77.0
MS.gene59575.t1 MTR_7g055710 28.571 315 192 13 2 291 17 323 1.72e-15 76.6
MS.gene59575.t1 MTR_6g014020 25.378 331 200 9 1 291 13 336 1.80e-15 76.6
MS.gene59575.t1 MTR_8g068330 26.923 312 195 10 1 289 11 312 1.82e-15 76.6
MS.gene59575.t1 MTR_7g070780 27.077 325 184 11 2 291 17 323 2.36e-15 76.3
MS.gene59575.t1 MTR_7g080940 23.323 313 190 8 5 289 18 308 2.38e-15 76.3
MS.gene59575.t1 MTR_2g008210 25.382 327 198 10 1 291 14 330 2.87e-15 75.9
MS.gene59575.t1 MTR_8g088560 25.786 318 185 10 1 288 13 309 3.06e-15 75.9
MS.gene59575.t1 MTR_5g035560 26.667 315 185 10 1 290 14 307 4.22e-15 75.5
MS.gene59575.t1 MTR_6g014187 28.372 215 132 5 99 291 122 336 4.84e-15 75.5
MS.gene59575.t1 MTR_4g008630 26.582 316 178 15 1 290 17 304 5.39e-15 75.1
MS.gene59575.t1 MTR_6g014150 28.704 216 130 5 99 291 119 333 5.53e-15 75.1
MS.gene59575.t1 MTR_5g072840 25.743 303 196 10 2 289 14 302 7.82e-15 74.7
MS.gene59575.t1 MTR_6g013440 24.847 326 208 8 1 291 14 337 9.26e-15 74.3
MS.gene59575.t1 MTR_5g072810 25.484 310 191 11 2 289 16 307 9.26e-15 74.3
MS.gene59575.t1 MTR_5g072830 26.316 304 189 10 2 287 14 300 9.51e-15 74.3
MS.gene59575.t1 MTR_6g013450 24.398 332 203 9 1 291 13 337 9.61e-15 74.3
MS.gene59575.t1 MTR_7g070930 25.237 317 203 10 2 291 18 327 1.41e-14 73.9
MS.gene59575.t1 MTR_8g064870 24.444 315 192 9 5 289 18 316 1.54e-14 73.9
MS.gene59575.t1 MTR_7g011470 30.435 207 120 7 99 291 122 318 1.59e-14 73.9
MS.gene59575.t1 MTR_6g014200 27.907 215 133 4 99 291 119 333 2.00e-14 73.6
MS.gene59575.t1 MTR_6g013920 29.032 217 128 7 99 291 121 335 2.02e-14 73.6
MS.gene59575.t1 MTR_1g029540 24.675 308 187 14 3 290 19 301 2.23e-14 73.2
MS.gene59575.t1 MTR_7g102490 24.688 320 205 10 1 290 12 325 2.77e-14 73.2
MS.gene59575.t1 MTR_3g479470 25.000 328 198 11 3 291 18 336 2.98e-14 73.2
MS.gene59575.t1 MTR_6g014270 25.904 332 199 10 1 291 10 335 3.59e-14 72.8
MS.gene59575.t1 MTR_6g014170 24.159 327 191 10 1 291 13 318 3.91e-14 72.8
MS.gene59575.t1 MTR_5g058320 28.218 202 122 5 113 291 120 321 4.06e-14 72.4
MS.gene59575.t1 MTR_6g011340 26.316 247 151 6 75 291 91 336 4.09e-14 72.4
MS.gene59575.t1 MTR_6g013900 29.302 215 130 5 99 291 121 335 5.44e-14 72.4
MS.gene59575.t1 MTR_7g070740 26.367 311 202 9 2 290 17 322 7.53e-14 71.6
MS.gene59575.t1 MTR_7g070910 25.316 316 204 12 2 291 15 324 7.68e-14 71.6
MS.gene59575.t1 MTR_8g066610 24.601 313 211 11 1 289 12 323 9.13e-14 71.6
MS.gene59575.t1 MTR_7g070940 25.879 313 182 12 8 290 19 311 1.21e-13 71.2
MS.gene59575.t1 MTR_7g070660 25.000 312 202 9 2 290 15 317 2.45e-13 70.1
MS.gene59575.t1 MTR_3g069690 24.051 316 188 9 1 289 11 301 2.75e-13 70.1
MS.gene59575.t1 MTR_7g102560 26.730 318 196 14 1 290 12 320 3.04e-13 70.1
MS.gene59575.t1 MTR_4g024020 24.847 326 197 12 1 290 12 325 3.08e-13 70.1
MS.gene59575.t1 MTR_8g068340 26.045 311 199 10 1 289 15 316 3.11e-13 70.1
MS.gene59575.t1 MTR_1g032490 25.000 308 201 11 5 289 17 317 4.75e-13 69.3
MS.gene59575.t1 MTR_7g070610 26.498 317 194 11 2 290 19 324 5.22e-13 69.3
MS.gene59575.t1 MTR_1g107380 27.650 217 125 8 96 291 120 325 5.43e-13 69.3
MS.gene59575.t1 MTR_3g049970 24.528 318 198 11 1 289 12 316 8.93e-13 68.6
MS.gene59575.t1 MTR_7g070810 24.847 326 180 12 2 290 15 312 1.06e-12 68.2
MS.gene59575.t1 MTR_8g068360 27.129 317 187 12 1 289 15 315 1.14e-12 68.2
MS.gene59575.t1 MTR_8g064880 23.125 320 194 9 5 289 16 318 1.45e-12 67.8
MS.gene59575.t1 MTR_4g485620 29.520 271 148 14 43 291 53 302 1.52e-12 67.8
MS.gene59575.t1 MTR_3g479490 25.075 335 193 14 1 291 9 329 1.97e-12 67.4
MS.gene59575.t1 MTR_4g108250 26.462 325 190 11 2 291 17 327 2.29e-12 67.4
MS.gene59575.t1 MTR_3g079480 25.545 321 205 10 3 291 26 344 2.78e-12 67.0
MS.gene59575.t1 MTR_1g107315 24.839 310 207 11 1 289 11 315 3.09e-12 67.0
MS.gene59575.t1 MTR_7g071040 26.183 317 200 12 2 291 21 330 3.35e-12 67.0
MS.gene59575.t1 MTR_3g084530 26.415 318 191 12 5 291 13 318 3.62e-12 66.6
MS.gene59575.t1 MTR_3g479610 34.545 110 59 3 195 291 59 168 6.94e-12 65.1
MS.gene59575.t1 MTR_1g019520 56.250 48 21 0 242 289 3 50 7.36e-12 63.9
MS.gene59575.t1 MTR_1g107350 22.903 310 213 10 1 289 11 315 9.78e-12 65.5
MS.gene59575.t1 MTR_7g102520 24.116 311 200 12 8 289 22 325 1.07e-11 65.5
MS.gene59575.t1 MTR_4g485590 25.080 311 184 11 2 291 13 295 1.13e-11 65.1
MS.gene59575.t1 MTR_8g043470 27.830 212 103 6 99 291 54 234 1.17e-11 65.1
MS.gene59575.t1 MTR_7g080950 23.492 315 187 11 5 289 13 303 1.76e-11 64.7
MS.gene59575.t1 MTR_5g016660 24.688 320 188 12 9 291 21 324 1.89e-11 64.7
MS.gene59575.t1 MTR_2g008225 25.649 308 203 10 1 289 18 318 2.52e-11 64.3
MS.gene59575.t1 MTR_5g072850 33.566 143 77 6 159 289 120 256 2.70e-11 63.9
MS.gene59575.t1 MTR_6g014310 34.247 146 83 5 159 291 192 337 3.57e-11 63.9
MS.gene59575.t1 MTR_3g084520 23.492 315 202 8 5 290 13 317 5.59e-11 63.2
MS.gene59575.t1 MTR_6g013435 30.612 147 88 4 159 291 61 207 6.16e-11 62.4
MS.gene59575.t1 MTR_1g107360 25.118 211 129 5 99 290 117 317 7.37e-11 62.8
MS.gene59575.t1 MTR_1g107365 32.692 104 59 1 198 290 247 350 7.86e-11 62.8
MS.gene59575.t1 MTR_3g084540 25.316 316 197 11 5 291 13 318 8.37e-11 62.8
MS.gene59575.t1 MTR_6g014190 31.387 137 81 3 168 291 7 143 9.33e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59575.t1 AT4G01070 55.593 295 125 4 1 289 11 305 2.00e-109 321
MS.gene59575.t1 AT4G01070 55.593 295 125 4 1 289 11 305 1.90e-108 323
MS.gene59575.t1 AT1G01420 51.014 296 137 5 1 289 14 308 2.66e-98 297
MS.gene59575.t1 AT1G01420 51.014 296 137 5 1 289 11 305 2.87e-98 297
MS.gene59575.t1 AT1G01390 49.831 295 142 4 1 289 11 305 6.11e-94 286
MS.gene59575.t1 AT1G01390 49.831 295 142 4 1 289 28 322 7.58e-94 286
MS.gene59575.t1 AT5G26310 36.455 299 172 8 1 289 10 300 1.08e-53 182
MS.gene59575.t1 AT5G66690 36.120 299 173 7 1 289 10 300 1.44e-52 179
MS.gene59575.t1 AT2G18570 34.323 303 179 10 1 289 8 304 1.93e-48 167
MS.gene59575.t1 AT3G50740 33.113 302 183 7 1 289 10 305 1.92e-46 162
MS.gene59575.t1 AT3G16520 33.555 301 187 6 1 289 8 307 6.03e-45 158
MS.gene59575.t1 AT3G16520 33.555 301 187 6 1 289 8 307 7.73e-45 157
MS.gene59575.t1 AT3G16520 33.555 301 187 6 1 289 8 307 7.79e-45 158
MS.gene59575.t1 AT1G07250 33.438 320 171 11 2 289 10 319 1.14e-37 139
MS.gene59575.t1 AT2G18560 33.486 218 135 3 80 290 1 215 5.09e-37 135
MS.gene59575.t1 AT3G21750 29.032 310 184 7 2 290 8 302 7.07e-35 131
MS.gene59575.t1 AT2G29750 31.111 315 187 11 1 289 11 321 2.03e-33 127
MS.gene59575.t1 AT1G07240 31.329 316 185 10 3 291 10 320 3.03e-32 124
MS.gene59575.t1 AT4G36770 32.154 311 172 13 1 289 7 300 2.98e-31 121
MS.gene59575.t1 AT1G07260 31.546 317 182 12 2 291 12 320 4.79e-31 121
MS.gene59575.t1 AT4G15280 29.808 312 184 11 2 289 8 308 8.57e-31 120
MS.gene59575.t1 AT3G21780 30.719 306 186 10 2 290 8 304 9.09e-31 120
MS.gene59575.t1 AT2G29740 31.962 316 183 13 2 291 14 323 9.19e-31 120
MS.gene59575.t1 AT4G15280 29.808 312 184 11 2 289 40 340 1.19e-30 120
MS.gene59575.t1 AT2G29730 29.375 320 180 11 3 291 10 314 1.84e-30 119
MS.gene59575.t1 AT3G21790 29.677 310 193 9 2 290 8 313 4.65e-29 115
MS.gene59575.t1 AT2G29710 30.449 312 186 11 3 291 10 313 1.41e-27 111
MS.gene59575.t1 AT3G21800 29.934 304 194 8 3 290 10 310 2.10e-27 111
MS.gene59575.t1 AT1G22370 27.829 327 187 10 2 291 17 331 1.73e-24 102
MS.gene59575.t1 AT1G22340 28.485 330 180 11 3 289 18 334 3.75e-24 102
MS.gene59575.t1 AT3G21760 30.449 312 189 9 3 290 9 316 9.88e-24 100
MS.gene59575.t1 AT2G30140 28.094 299 194 6 2 289 17 305 6.64e-23 98.2
MS.gene59575.t1 AT1G22360 28.012 332 183 12 3 291 15 333 7.91e-23 98.2
MS.gene59575.t1 AT1G22380 28.963 328 185 11 3 291 18 336 9.26e-23 98.2
MS.gene59575.t1 AT1G22360 28.012 332 183 12 3 291 15 333 9.57e-23 97.8
MS.gene59575.t1 AT2G30140 28.000 300 194 6 2 289 17 306 1.91e-22 97.1
MS.gene59575.t1 AT1G22400 28.037 321 198 11 3 291 18 337 2.19e-22 97.1
MS.gene59575.t1 AT1G78270 27.760 317 200 8 2 289 17 333 1.21e-21 94.7
MS.gene59575.t1 AT2G36970 25.857 321 199 10 1 291 13 324 3.52e-21 93.6
MS.gene59575.t1 AT2G30150 28.526 312 176 11 3 289 2 291 1.54e-20 91.3
MS.gene59575.t1 AT2G30150 28.526 312 176 11 3 289 18 307 1.77e-20 91.3
MS.gene59575.t1 AT1G10400 27.950 322 185 11 1 289 10 317 9.06e-20 89.4
MS.gene59575.t1 AT5G14860 25.466 322 203 11 1 291 11 326 1.77e-19 88.6
MS.gene59575.t1 AT2G31750 27.937 315 185 12 1 290 11 308 3.34e-19 87.4
MS.gene59575.t1 AT4G15260 29.500 200 115 5 106 290 1 189 3.68e-19 86.7
MS.gene59575.t1 AT2G31750 27.937 315 185 12 1 290 11 308 4.58e-19 87.4
MS.gene59575.t1 AT5G59580 25.817 306 193 9 1 289 12 300 6.97e-18 83.6
MS.gene59575.t1 AT1G51210 27.653 311 189 14 1 291 23 317 2.08e-17 82.4
MS.gene59575.t1 AT5G59590 25.249 301 202 10 1 289 13 302 2.33e-17 82.0
MS.gene59575.t1 AT2G16890 24.606 317 204 12 1 291 12 319 3.83e-17 81.3
MS.gene59575.t1 AT2G16890 24.606 317 204 12 1 291 12 319 6.46e-17 80.9
MS.gene59575.t1 AT3G46670 27.184 309 186 9 1 289 12 301 7.92e-17 80.5
MS.gene59575.t1 AT2G36770 24.516 310 212 10 1 289 17 325 8.79e-17 80.5
MS.gene59575.t1 AT5G03490 26.837 313 194 13 1 291 22 321 1.13e-16 80.1
MS.gene59575.t1 AT1G22370 37.500 120 62 2 185 291 42 161 1.31e-16 79.0
MS.gene59575.t1 AT1G73880 25.152 330 179 14 1 290 17 318 1.56e-16 79.7
MS.gene59575.t1 AT2G36800 25.305 328 188 11 1 289 15 324 2.00e-16 79.7
MS.gene59575.t1 AT3G21560 23.962 313 204 9 5 290 19 324 1.06e-15 77.4
MS.gene59575.t1 AT2G36780 25.161 310 210 11 1 289 17 325 1.62e-15 77.0
MS.gene59575.t1 AT2G23250 25.685 292 196 7 8 289 8 288 2.09e-15 76.3
MS.gene59575.t1 AT2G36750 24.847 326 190 11 1 289 13 320 2.56e-15 76.3
MS.gene59575.t1 AT4G34131 24.074 324 202 9 2 291 14 327 2.67e-15 76.3
MS.gene59575.t1 AT2G31790 25.962 312 195 8 2 290 12 310 3.56e-15 75.9
MS.gene59575.t1 AT1G05675 25.397 315 195 12 1 290 9 308 5.32e-15 75.1
MS.gene59575.t1 AT4G34135 25.078 319 203 12 2 290 15 327 1.25e-14 73.6
MS.gene59575.t1 AT2G15480 25.776 322 199 12 2 291 14 327 1.69e-14 73.9
MS.gene59575.t1 AT2G15480 25.776 322 199 12 2 291 14 327 1.96e-14 73.6
MS.gene59575.t1 AT2G23260 26.367 311 190 10 1 289 13 306 2.15e-14 73.6
MS.gene59575.t1 AT5G49690 25.974 308 204 9 1 291 13 313 2.22e-14 73.6
MS.gene59575.t1 AT5G05900 26.144 306 200 8 1 289 11 307 2.28e-14 73.2
MS.gene59575.t1 AT4G34135 25.078 319 203 12 2 290 15 327 2.69e-14 73.2
MS.gene59575.t1 AT2G15490 25.617 324 197 13 2 291 11 324 4.36e-14 72.4
MS.gene59575.t1 AT2G43820 24.841 314 183 13 3 289 12 299 5.22e-14 72.4
MS.gene59575.t1 AT2G15490 25.617 324 197 13 2 291 11 324 5.47e-14 72.4
MS.gene59575.t1 AT5G38040 25.839 298 195 10 6 289 18 303 6.40e-14 72.0
MS.gene59575.t1 AT3G46700 24.415 299 203 11 1 289 12 297 6.61e-14 72.0
MS.gene59575.t1 AT3G46650 25.083 303 183 11 1 289 13 285 6.62e-14 72.0
MS.gene59575.t1 AT3G46660 26.733 303 197 9 1 289 17 308 7.99e-14 71.6
MS.gene59575.t1 AT2G26480 28.261 322 163 14 1 289 11 297 9.87e-14 71.2
MS.gene59575.t1 AT2G16890 23.625 309 201 12 1 283 12 311 1.80e-13 70.1
MS.gene59575.t1 AT2G16890 23.625 309 201 12 1 283 12 311 1.80e-13 70.1
MS.gene59575.t1 AT5G05890 26.623 308 194 9 1 289 11 305 7.34e-13 68.9
MS.gene59575.t1 AT4G15500 23.000 300 214 8 5 289 16 313 1.03e-12 68.6
MS.gene59575.t1 AT2G36790 25.857 321 194 12 1 289 16 324 2.05e-12 67.4
MS.gene59575.t1 AT5G05880 24.510 306 199 9 1 289 11 301 2.11e-12 67.4
MS.gene59575.t1 AT5G38010 24.290 317 190 8 1 289 13 307 2.84e-12 67.0
MS.gene59575.t1 AT3G53160 24.290 317 206 10 1 290 11 320 2.92e-12 67.0
MS.gene59575.t1 AT2G28080 23.810 315 206 12 2 291 22 327 4.41e-12 66.6
MS.gene59575.t1 AT3G46690 24.026 308 198 9 1 289 12 302 5.03e-12 66.2
MS.gene59575.t1 AT2G43840 24.051 316 183 12 3 289 12 299 5.48e-12 66.2
MS.gene59575.t1 AT5G05860 27.184 309 185 12 1 289 12 300 6.54e-12 65.9
MS.gene59575.t1 AT2G43840 24.051 316 183 12 3 289 12 299 8.61e-12 65.5
MS.gene59575.t1 AT3G46720 25.407 307 193 9 1 289 12 300 2.32e-11 64.3
MS.gene59575.t1 AT3G55700 25.868 317 183 15 1 289 11 303 3.26e-11 63.9
MS.gene59575.t1 AT5G37950 27.363 201 138 5 93 289 77 273 3.55e-11 63.5
MS.gene59575.t1 AT4G15550 23.333 300 209 10 5 288 20 314 4.26e-11 63.5

Find 109 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAGATGAAATTGCTTA+TGG 0.199225 8.3:+65934318 MS.gene59575:CDS
CCAGGGATGTTAAGCGGTTC+AGG 0.252657 8.3:-65933973 None:intergenic
GCTCTCGTTGTCGACCTATT+TGG 0.262573 8.3:+65933814 MS.gene59575:CDS
GTCGAGTTGGGGAAAATAAA+AGG 0.278544 8.3:-65933920 None:intergenic
TAAACTCGCCCTGAACATTT+TGG 0.285664 8.3:-65933942 None:intergenic
GTGGCTGTCATGAGTGTTTC+GGG 0.287072 8.3:-65933724 None:intergenic
AAAGGTTCTTGTGGGTTCTA+AGG 0.307960 8.3:+65934358 MS.gene59575:CDS
AAAATGTTCAGGGCGAGTTT+AGG 0.308903 8.3:+65933944 MS.gene59575:CDS
AAATGTTCAGGGCGAGTTTA+GGG 0.316326 8.3:+65933945 MS.gene59575:CDS
CCTGGATGTTTCGCGGTTCA+TGG 0.328235 8.3:+65933991 MS.gene59575:CDS
AATGAAGACTCTATTAATAA+TGG 0.349621 8.3:+65934198 MS.gene59575:CDS
AAAGGCAAAGGACAAGTTAT+TGG 0.355934 8.3:-65933902 None:intergenic
CCAACTCGACCAAAATGTTC+AGG 0.364634 8.3:+65933933 MS.gene59575:CDS
GAGTGTTTCGGGTTTGGTCT+TGG 0.366200 8.3:-65933713 None:intergenic
AGTGTTTCGGGTTTGGTCTT+GGG 0.369662 8.3:-65933712 None:intergenic
AACGGTCCAACCGGATAAAC+CGG 0.383526 8.3:-65934171 None:intergenic
GGTGGCTGTCATGAGTGTTT+CGG 0.388532 8.3:-65933725 None:intergenic
GGTGATGGGGAGGTTATGTT+TGG 0.390204 8.3:-65933575 None:intergenic
TGTCATGAGTGTTTCGGGTT+TGG 0.392325 8.3:-65933719 None:intergenic
GTAGGGAAGTAGAGATATGA+AGG 0.393522 8.3:-65933874 None:intergenic
TTTGAAGGTGGACCGTCGTT+AGG 0.393614 8.3:-65933607 None:intergenic
AAACAGATGAAATTGCTTAT+GGG 0.403797 8.3:+65934319 MS.gene59575:CDS
CATCTGTTTGAGCACTAGTA+AGG 0.409084 8.3:-65934305 None:intergenic
GAATGAACCACCGGTTTATC+CGG 0.413273 8.3:+65934161 MS.gene59575:CDS
TCGTTGTTTCGATCATGAAT+CGG 0.414724 8.3:-65934030 None:intergenic
GGAATGAGATGTCCCATTCC+TGG 0.415310 8.3:-65933526 None:intergenic
CTCTTGGCGAATTCGATCAT+TGG 0.416083 8.3:-65933547 None:intergenic
AGTGTTATATTTGTGAATTT+TGG 0.416579 8.3:+65934270 MS.gene59575:CDS
AGGTCGGAGAGGGTGACCGG+AGG 0.427105 8.3:-65933685 None:intergenic
TTTGGTCTTGGGTGGGAGGT+CGG 0.433770 8.3:-65933701 None:intergenic
CAAAGGCATCGGTGCCAAAT+AGG 0.435365 8.3:-65933828 None:intergenic
CGTTGTTTCGATCATGAATC+GGG 0.436640 8.3:-65934029 None:intergenic
GGAAGTCATAAGAGAGAGTA+GGG 0.447630 8.3:-65933779 None:intergenic
GGGAGGTCGGAGAGGGTGAC+CGG 0.452914 8.3:-65933688 None:intergenic
CCATGAACCGCGAAACATCC+AGG 0.462567 8.3:-65933991 None:intergenic
TCTTGGGTGGGAGGTCGGAG+AGG 0.467177 8.3:-65933696 None:intergenic
ATGGTGGAGAAAACACTTGT+AGG 0.469986 8.3:-65934055 None:intergenic
CGGGTTTGGTCTTGGGTGGG+AGG 0.470465 8.3:-65933705 None:intergenic
TCATTCACTAACGGTCCAAC+CGG 0.470646 8.3:-65934180 None:intergenic
TGACCGGAGGGAGGAAGACA+TGG 0.471692 8.3:-65933672 None:intergenic
GGTTATATAGAGAGGACTAA+AGG 0.471746 8.3:+65934459 MS.gene59575:intron
ACGGTGGTTTGAGCCTTTGA+AGG 0.474238 8.3:-65933622 None:intergenic
TTCCCATGTCTTCCTCCCTC+CGG 0.474504 8.3:+65933669 MS.gene59575:CDS
GAGTGAACAAAGGTTCTTGT+GGG 0.481319 8.3:+65934350 MS.gene59575:CDS
TTGAAGGTGGACCGTCGTTA+GGG 0.490641 8.3:-65933606 None:intergenic
CATGTTTCCAACTCCAGGAA+TGG 0.491299 8.3:+65933513 None:intergenic
CTGGATGTTTCGCGGTTCAT+GGG 0.496839 8.3:+65933992 MS.gene59575:CDS
AGATGTCCCATTCCTGGAGT+TGG 0.498438 8.3:-65933520 None:intergenic
AGATGAAATTGCTTATGGGT+TGG 0.499668 8.3:+65934323 MS.gene59575:CDS
CTTGGGTGGGAGGTCGGAGA+GGG 0.499779 8.3:-65933695 None:intergenic
ATGTTTCCAACTCCAGGAAT+GGG 0.505514 8.3:+65933514 MS.gene59575:CDS
GTAGGGTTTGAAAGAGAGAA+GGG 0.507740 8.3:-65933762 None:intergenic
CCTGAACCGCTTAACATCCC+TGG 0.512247 8.3:+65933973 MS.gene59575:CDS
TTTCGGGTTTGGTCTTGGGT+GGG 0.514980 8.3:-65933708 None:intergenic
GTAGCCATGTTTCCAACTCC+AGG 0.515967 8.3:+65933508 None:intergenic
TAACGACGGTCCACCTTCAA+AGG 0.518767 8.3:+65933609 MS.gene59575:CDS
ACAAGATACAAGTTGGCTAA+AGG 0.520920 8.3:+65934081 MS.gene59575:CDS
CAGGGATGTTAAGCGGTTCA+GGG 0.521709 8.3:-65933972 None:intergenic
TTAGGGATGATGAAGGTGAT+GGG 0.523204 8.3:-65933589 None:intergenic
CATGGGAAATGCCGTGAGGT+AGG 0.524602 8.3:-65933654 None:intergenic
ATGGGAAATGCCGTGAGGTA+GGG 0.524825 8.3:-65933653 None:intergenic
CGGAGAGGGTGACCGGAGGG+AGG 0.525328 8.3:-65933681 None:intergenic
GGTCGGAGAGGGTGACCGGA+GGG 0.529432 8.3:-65933684 None:intergenic
GTGAGGTAGGGAAGTGAGTA+CGG 0.529713 8.3:-65933641 None:intergenic
AGTAGGGTTTGAAAGAGAGA+AGG 0.530488 8.3:-65933763 None:intergenic
GAACCACCGGTTTATCCGGT+TGG 0.530877 8.3:+65934165 MS.gene59575:CDS
AGCGGCCATGTCAAAGGCAT+CGG 0.531956 8.3:-65933839 None:intergenic
GTTATGTTTGGAGAGTCTCT+TGG 0.533953 8.3:-65933563 None:intergenic
GTTTCGGGTTTGGTCTTGGG+TGG 0.541302 8.3:-65933709 None:intergenic
GGGAAGTCATAAGAGAGAGT+AGG 0.545926 8.3:-65933780 None:intergenic
CAACTCGACCAAAATGTTCA+GGG 0.546449 8.3:+65933934 MS.gene59575:CDS
TGGCACCGATGCCTTTGACA+TGG 0.551374 8.3:+65933834 MS.gene59575:CDS
TAACATCCCTGGATGTTTCG+CGG 0.554616 8.3:+65933984 MS.gene59575:CDS
TAGTTCAGCGGCCATGTCAA+AGG 0.556477 8.3:-65933845 None:intergenic
AAAGGACAAGTTATTGGCAG+TGG 0.556666 8.3:-65933896 None:intergenic
GTGGTTTGAGCCTTTGAAGG+TGG 0.565246 8.3:-65933619 None:intergenic
TTTGCAAAAGAATGAACCAC+CGG 0.567033 8.3:+65934152 MS.gene59575:CDS
GTTAGGGATGATGAAGGTGA+TGG 0.569943 8.3:-65933590 None:intergenic
ACAAGTTATTGGCAGTGGTA+GGG 0.574724 8.3:-65933891 None:intergenic
TGAGTGAACAAAGGTTCTTG+TGG 0.577096 8.3:+65934349 MS.gene59575:CDS
CCATGTGACAAGATACAAGT+TGG 0.578373 8.3:+65934074 MS.gene59575:CDS
AGAAGGGAGAGAACGAACAA+TGG 0.581510 8.3:-65933746 None:intergenic
CATTCCTGGAGTTGGAAACA+TGG 0.584740 8.3:-65933512 None:intergenic
CCAACTTGTATCTTGTCACA+TGG 0.585986 8.3:-65934074 None:intergenic
CAACGAGAGCGGAGAGACGG+TGG 0.586654 8.3:-65933801 None:intergenic
GACAAGTTATTGGCAGTGGT+AGG 0.603578 8.3:-65933892 None:intergenic
CGACAACGAGAGCGGAGAGA+CGG 0.605363 8.3:-65933804 None:intergenic
ATAGAGTCTTCATTCACTAA+CGG 0.608480 8.3:-65934189 None:intergenic
TGGTTGGATGAGCAGCCACA+TGG 0.610908 8.3:+65934246 MS.gene59575:CDS
AACGAGAGCGGAGAGACGGT+GGG 0.617926 8.3:-65933800 None:intergenic
TTGGGGAAAATAAAAGGCAA+AGG 0.618995 8.3:-65933914 None:intergenic
CATGAACCGCGAAACATCCA+GGG 0.625416 8.3:-65933990 None:intergenic
GGATGATGAAGGTGATGGGG+AGG 0.630217 8.3:-65933585 None:intergenic
AGGGAGAGAACGAACAATGG+TGG 0.639304 8.3:-65933743 None:intergenic
TAGGGAAGTAGAGATATGAA+GGG 0.640711 8.3:-65933873 None:intergenic
GACCGGAGGGAGGAAGACAT+GGG 0.642899 8.3:-65933671 None:intergenic
TAGGGATGATGAAGGTGATG+GGG 0.644244 8.3:-65933588 None:intergenic
AAATAGGTCGACAACGAGAG+CGG 0.652382 8.3:-65933812 None:intergenic
ACCGTCGTTAGGGATGATGA+AGG 0.658402 8.3:-65933596 None:intergenic
GGTTGGAAATGAGTGAACAA+AGG 0.662246 8.3:+65934340 MS.gene59575:CDS
ACTTGTATCTTGTCACATGG+TGG 0.665922 8.3:-65934071 None:intergenic
ACCTTCATCATCCCTAACGA+CGG 0.676929 8.3:+65933595 MS.gene59575:CDS
AAACATCCAGGGATGTTAAG+CGG 0.681929 8.3:-65933979 None:intergenic
TGAAGGGATATCTAGTTCAG+CGG 0.695711 8.3:-65933857 None:intergenic
GTACTCACTTCCCTACCTCA+CGG 0.702162 8.3:+65933643 MS.gene59575:CDS
GGTCCAACCGGATAAACCGG+TGG 0.727499 8.3:-65934168 None:intergenic
ACAAATATAACACTTCCATG+TGG 0.743736 8.3:-65934261 None:intergenic
AAGACATGGGAAATGCCGTG+AGG 0.755650 8.3:-65933658 None:intergenic
AGGTAGGGAAGTGAGTACGG+TGG 0.758148 8.3:-65933638 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAGACTCTATTAATAA+TGG + chr8.3:65934198-65934217 MS.gene59575:CDS 20.0%
!! CATTTGGTAAAAATTCAAAA+GGG - chr8.3:65934440-65934459 None:intergenic 20.0%
!!! AGTGTTATATTTGTGAATTT+TGG + chr8.3:65934270-65934289 MS.gene59575:CDS 20.0%
! AAACAGATGAAATTGCTTAT+GGG + chr8.3:65934319-65934338 MS.gene59575:CDS 25.0%
! CCATTTGGTAAAAATTCAAA+AGG - chr8.3:65934441-65934460 None:intergenic 25.0%
!! AATTTGATGTGTGTTTTCAA+TGG + chr8.3:65934226-65934245 MS.gene59575:CDS 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG + chr8.3:65934438-65934457 MS.gene59575:intron 25.0%
!! TCATTTTCAACTTTATCCTT+AGG - chr8.3:65934387-65934406 None:intergenic 25.0%
ACAAATATAACACTTCCATG+TGG - chr8.3:65934264-65934283 None:intergenic 30.0%
ATAGAGTCTTCATTCACTAA+CGG - chr8.3:65934192-65934211 None:intergenic 30.0%
CAAACAGATGAAATTGCTTA+TGG + chr8.3:65934318-65934337 MS.gene59575:CDS 30.0%
TACCAAATGGTTATATAGAG+AGG + chr8.3:65934451-65934470 MS.gene59575:intron 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG + chr8.3:65934278-65934297 MS.gene59575:CDS 30.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG + chr8.3:65934116-65934135 MS.gene59575:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG + chr8.3:65934279-65934298 MS.gene59575:CDS 30.0%
AAAGGCAAAGGACAAGTTAT+TGG - chr8.3:65933905-65933924 None:intergenic 35.0%
AGATGAAATTGCTTATGGGT+TGG + chr8.3:65934323-65934342 MS.gene59575:CDS 35.0%
GTCCTCTCTATATAACCATT+TGG - chr8.3:65934456-65934475 None:intergenic 35.0%
TAGGGAAGTAGAGATATGAA+GGG - chr8.3:65933876-65933895 None:intergenic 35.0%
TGCAAAAAAGTAATAGCCTC+CGG - chr8.3:65934138-65934157 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG - chr8.3:65933917-65933936 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG + chr8.3:65934152-65934171 MS.gene59575:CDS 35.0%
! ACAAGATACAAGTTGGCTAA+AGG + chr8.3:65934081-65934100 MS.gene59575:CDS 35.0%
! TCGTTGTTTCGATCATGAAT+CGG - chr8.3:65934033-65934052 None:intergenic 35.0%
! TGATGTGTGTTTTCAATGGT+TGG + chr8.3:65934230-65934249 MS.gene59575:CDS 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG + chr8.3:65934280-65934299 MS.gene59575:CDS 35.0%
AAAATGTTCAGGGCGAGTTT+AGG + chr8.3:65933944-65933963 MS.gene59575:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG - chr8.3:65933982-65934001 None:intergenic 40.0%
AAAGGACAAGTTATTGGCAG+TGG - chr8.3:65933899-65933918 None:intergenic 40.0%
AAAGGTTCTTGTGGGTTCTA+AGG + chr8.3:65934358-65934377 MS.gene59575:CDS 40.0%
AAATGTTCAGGGCGAGTTTA+GGG + chr8.3:65933945-65933964 MS.gene59575:CDS 40.0%
ACAAGTTATTGGCAGTGGTA+GGG - chr8.3:65933894-65933913 None:intergenic 40.0%
ACTTGTATCTTGTCACATGG+TGG - chr8.3:65934074-65934093 None:intergenic 40.0%
AGTAGGGTTTGAAAGAGAGA+AGG - chr8.3:65933766-65933785 None:intergenic 40.0%
ATGTTTCCAACTCCAGGAAT+GGG + chr8.3:65933514-65933533 MS.gene59575:CDS 40.0%
CAACTCGACCAAAATGTTCA+GGG + chr8.3:65933934-65933953 MS.gene59575:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG - chr8.3:65934308-65934327 None:intergenic 40.0%
CCAACTTGTATCTTGTCACA+TGG - chr8.3:65934077-65934096 None:intergenic 40.0%
CCATGTGACAAGATACAAGT+TGG + chr8.3:65934074-65934093 MS.gene59575:CDS 40.0%
GAGTGAACAAAGGTTCTTGT+GGG + chr8.3:65934350-65934369 MS.gene59575:CDS 40.0%
GGAAGTCATAAGAGAGAGTA+GGG - chr8.3:65933782-65933801 None:intergenic 40.0%
GGTTGGAAATGAGTGAACAA+AGG + chr8.3:65934340-65934359 MS.gene59575:CDS 40.0%
GTAGGGAAGTAGAGATATGA+AGG - chr8.3:65933877-65933896 None:intergenic 40.0%
GTAGGGTTTGAAAGAGAGAA+GGG - chr8.3:65933765-65933784 None:intergenic 40.0%
GTTATGTTTGGAGAGTCTCT+TGG - chr8.3:65933566-65933585 None:intergenic 40.0%
TGAGTGAACAAAGGTTCTTG+TGG + chr8.3:65934349-65934368 MS.gene59575:CDS 40.0%
TTAGGGATGATGAAGGTGAT+GGG - chr8.3:65933592-65933611 None:intergenic 40.0%
! ATGGTGGAGAAAACACTTGT+AGG - chr8.3:65934058-65934077 None:intergenic 40.0%
! CGTTGTTTCGATCATGAATC+GGG - chr8.3:65934032-65934051 None:intergenic 40.0%
! TAAACTCGCCCTGAACATTT+TGG - chr8.3:65933945-65933964 None:intergenic 40.0%
! TGAAGGGATATCTAGTTCAG+CGG - chr8.3:65933860-65933879 None:intergenic 40.0%
!! CTGAACATTTTGGTCGAGTT+GGG - chr8.3:65933935-65933954 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG - chr8.3:65933923-65933942 None:intergenic 40.0%
!! TGAACATTTTGGTCGAGTTG+GGG - chr8.3:65933934-65933953 None:intergenic 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG + chr8.3:65934119-65934138 MS.gene59575:CDS 40.0%
AAATAGGTCGACAACGAGAG+CGG - chr8.3:65933815-65933834 None:intergenic 45.0%
ACCTTCATCATCCCTAACGA+CGG + chr8.3:65933595-65933614 MS.gene59575:CDS 45.0%
AGAAGGGAGAGAACGAACAA+TGG - chr8.3:65933749-65933768 None:intergenic 45.0%
CCAACTCGACCAAAATGTTC+AGG + chr8.3:65933933-65933952 MS.gene59575:CDS 45.0%
CTCTTGGCGAATTCGATCAT+TGG - chr8.3:65933550-65933569 None:intergenic 45.0%
GACAAGTTATTGGCAGTGGT+AGG - chr8.3:65933895-65933914 None:intergenic 45.0%
GGGAAGTCATAAGAGAGAGT+AGG - chr8.3:65933783-65933802 None:intergenic 45.0%
GTTAGGGATGATGAAGGTGA+TGG - chr8.3:65933593-65933612 None:intergenic 45.0%
TAACATCCCTGGATGTTTCG+CGG + chr8.3:65933984-65934003 MS.gene59575:CDS 45.0%
TAGGGATGATGAAGGTGATG+GGG - chr8.3:65933591-65933610 None:intergenic 45.0%
TCATTCACTAACGGTCCAAC+CGG - chr8.3:65934183-65934202 None:intergenic 45.0%
!! AGTGTTTCGGGTTTGGTCTT+GGG - chr8.3:65933715-65933734 None:intergenic 45.0%
!! CCTGAACATTTTGGTCGAGT+TGG - chr8.3:65933936-65933955 None:intergenic 45.0%
!! GAATGAACCACCGGTTTATC+CGG + chr8.3:65934161-65934180 MS.gene59575:CDS 45.0%
!! TGTCATGAGTGTTTCGGGTT+TGG - chr8.3:65933722-65933741 None:intergenic 45.0%
AACGGTCCAACCGGATAAAC+CGG - chr8.3:65934174-65934193 None:intergenic 50.0%
AAGACATGGGAAATGCCGTG+AGG - chr8.3:65933661-65933680 None:intergenic 50.0%
ACCGTCGTTAGGGATGATGA+AGG - chr8.3:65933599-65933618 None:intergenic 50.0%
ACGGTGGTTTGAGCCTTTGA+AGG - chr8.3:65933625-65933644 None:intergenic 50.0%
AGATGTCCCATTCCTGGAGT+TGG - chr8.3:65933523-65933542 None:intergenic 50.0%
AGGGAGAGAACGAACAATGG+TGG - chr8.3:65933746-65933765 None:intergenic 50.0%
ATGGGAAATGCCGTGAGGTA+GGG - chr8.3:65933656-65933675 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG - chr8.3:65933975-65933994 None:intergenic 50.0%
CATGAACCGCGAAACATCCA+GGG - chr8.3:65933993-65934012 None:intergenic 50.0%
CTGGATGTTTCGCGGTTCAT+GGG + chr8.3:65933992-65934011 MS.gene59575:CDS 50.0%
GCTCTCGTTGTCGACCTATT+TGG + chr8.3:65933814-65933833 MS.gene59575:CDS 50.0%
GGAATGAGATGTCCCATTCC+TGG - chr8.3:65933529-65933548 None:intergenic 50.0%
GGTGGCTGTCATGAGTGTTT+CGG - chr8.3:65933728-65933747 None:intergenic 50.0%
GTACTCACTTCCCTACCTCA+CGG + chr8.3:65933643-65933662 MS.gene59575:CDS 50.0%
GTGAGGTAGGGAAGTGAGTA+CGG - chr8.3:65933644-65933663 None:intergenic 50.0%
GTGGCTGTCATGAGTGTTTC+GGG - chr8.3:65933727-65933746 None:intergenic 50.0%
TAACGACGGTCCACCTTCAA+AGG + chr8.3:65933609-65933628 MS.gene59575:CDS 50.0%
TAGTTCAGCGGCCATGTCAA+AGG - chr8.3:65933848-65933867 None:intergenic 50.0%
TTGAAGGTGGACCGTCGTTA+GGG - chr8.3:65933609-65933628 None:intergenic 50.0%
TTTGAAGGTGGACCGTCGTT+AGG - chr8.3:65933610-65933629 None:intergenic 50.0%
! GTGGTTTGAGCCTTTGAAGG+TGG - chr8.3:65933622-65933641 None:intergenic 50.0%
!! CAAAGGCATCGGTGCCAAAT+AGG - chr8.3:65933831-65933850 None:intergenic 50.0%
!! GAGTGTTTCGGGTTTGGTCT+TGG - chr8.3:65933716-65933735 None:intergenic 50.0%
!! GGTGATGGGGAGGTTATGTT+TGG - chr8.3:65933578-65933597 None:intergenic 50.0%
!! GTGGGTTCTAAGGTGTCCTA+AGG + chr8.3:65934368-65934387 MS.gene59575:intron 50.0%
!! TTTCGGGTTTGGTCTTGGGT+GGG - chr8.3:65933711-65933730 None:intergenic 50.0%
AGGTAGGGAAGTGAGTACGG+TGG - chr8.3:65933641-65933660 None:intergenic 55.0%
CATGGGAAATGCCGTGAGGT+AGG - chr8.3:65933657-65933676 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG - chr8.3:65933976-65933995 None:intergenic 55.0%
CCATGAACCGCGAAACATCC+AGG - chr8.3:65933994-65934013 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG + chr8.3:65933973-65933992 MS.gene59575:CDS 55.0%
CCTGGATGTTTCGCGGTTCA+TGG + chr8.3:65933991-65934010 MS.gene59575:CDS 55.0%
TGGTTGGATGAGCAGCCACA+TGG + chr8.3:65934246-65934265 MS.gene59575:CDS 55.0%
TTCCCATGTCTTCCTCCCTC+CGG + chr8.3:65933669-65933688 MS.gene59575:CDS 55.0%
! AGCGGCCATGTCAAAGGCAT+CGG - chr8.3:65933842-65933861 None:intergenic 55.0%
!! GAACCACCGGTTTATCCGGT+TGG + chr8.3:65934165-65934184 MS.gene59575:CDS 55.0%
!! GGATGATGAAGGTGATGGGG+AGG - chr8.3:65933588-65933607 None:intergenic 55.0%
!! GTTTCGGGTTTGGTCTTGGG+TGG - chr8.3:65933712-65933731 None:intergenic 55.0%
!! TGGCACCGATGCCTTTGACA+TGG + chr8.3:65933834-65933853 MS.gene59575:CDS 55.0%
!! TTTGGTCTTGGGTGGGAGGT+CGG - chr8.3:65933704-65933723 None:intergenic 55.0%
AACGAGAGCGGAGAGACGGT+GGG - chr8.3:65933803-65933822 None:intergenic 60.0%
CGACAACGAGAGCGGAGAGA+CGG - chr8.3:65933807-65933826 None:intergenic 60.0%
GACCGGAGGGAGGAAGACAT+GGG - chr8.3:65933674-65933693 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG - chr8.3:65934171-65934190 None:intergenic 60.0%
TGACCGGAGGGAGGAAGACA+TGG - chr8.3:65933675-65933694 None:intergenic 60.0%
CAACGAGAGCGGAGAGACGG+TGG - chr8.3:65933804-65933823 None:intergenic 65.0%
CTTGGGTGGGAGGTCGGAGA+GGG - chr8.3:65933698-65933717 None:intergenic 65.0%
TCTTGGGTGGGAGGTCGGAG+AGG - chr8.3:65933699-65933718 None:intergenic 65.0%
!! CGGGTTTGGTCTTGGGTGGG+AGG - chr8.3:65933708-65933727 None:intergenic 65.0%
AGGTCGGAGAGGGTGACCGG+AGG - chr8.3:65933688-65933707 None:intergenic 70.0%
GGGAGGTCGGAGAGGGTGAC+CGG - chr8.3:65933691-65933710 None:intergenic 70.0%
GGTCGGAGAGGGTGACCGGA+GGG - chr8.3:65933687-65933706 None:intergenic 70.0%
CGGAGAGGGTGACCGGAGGG+AGG - chr8.3:65933684-65933703 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 65933514 65934478 65933514 ID=MS.gene59575
chr8.3 mRNA 65933514 65934478 65933514 ID=MS.gene59575.t1;Parent=MS.gene59575
chr8.3 exon 65933514 65934379 65933514 ID=MS.gene59575.t1.exon1;Parent=MS.gene59575.t1
chr8.3 CDS 65933514 65934379 65933514 ID=cds.MS.gene59575.t1;Parent=MS.gene59575.t1
chr8.3 exon 65934469 65934478 65934469 ID=MS.gene59575.t1.exon2;Parent=MS.gene59575.t1
chr8.3 CDS 65934469 65934478 65934469 ID=cds.MS.gene59575.t1;Parent=MS.gene59575.t1
Gene Sequence

>MS.gene59575

ATGTTTCCAACTCCAGGAATGGGACATCTCATTCCAATGATCGAATTCGCCAAGAGACTCTCCAAACATAACCTCCCCATCACCTTCATCATCCCTAACGACGGTCCACCTTCAAAGGCTCAAACCACCGTACTCACTTCCCTACCTCACGGCATTTCCCATGTCTTCCTCCCTCCGGTCACCCTCTCCGACCTCCCACCCAAGACCAAACCCGAAACACTCATGACAGCCACCATTGTTCGTTCTCTCCCTTCTCTCTTTCAAACCCTACTCTCTCTTATGACTTCCCACCGTCTCTCCGCTCTCGTTGTCGACCTATTTGGCACCGATGCCTTTGACATGGCCGCTGAACTAGATATCCCTTCATATCTCTACTTCCCTACCACTGCCAATAACTTGTCCTTTGCCTTTTATTTTCCCCAACTCGACCAAAATGTTCAGGGCGAGTTTAGGGATATCCCTGAACCGCTTAACATCCCTGGATGTTTCGCGGTTCATGGGAAAGACTTAGCAGACCCGATTCATGATCGAAACAACGAAGCCTACAAGTGTTTTCTCCACCATGTGACAAGATACAAGTTGGCTAAAGGAATAATAGAGAATAGTTTTTTTGAGCTTGAACCGGAGGCTATTACTTTTTTGCAAAAGAATGAACCACCGGTTTATCCGGTTGGACCGTTAGTGAATGAAGACTCTATTAATAATGGATCAGAATTTGATGTGTGTTTTCAATGGTTGGATGAGCAGCCACATGGAAGTGTTATATTTGTGAATTTTGGTAGTGAGGGGATCCTTACTAGTGCTCAAACAGATGAAATTGCTTATGGGTTGGAAATGAGTGAACAAAGGTTCTTGTGGGTTCTAAGGTGTCCTAAGGATAAAGTTGAAAATGATTCTAATTTTATTGCAAATAGTAATGTTGACCCTTTTGAATTTTTACCAAATGGTTATATAGAGAGGACTAA

Protein sequence

>MS.gene59575.t1

MFPTPGMGHLIPMIEFAKRLSKHNLPITFIIPNDGPPSKAQTTVLTSLPHGISHVFLPPVTLSDLPPKTKPETLMTATIVRSLPSLFQTLLSLMTSHRLSALVVDLFGTDAFDMAAELDIPSYLYFPTTANNLSFAFYFPQLDQNVQGEFRDIPEPLNIPGCFAVHGKDLADPIHDRNNEAYKCFLHHVTRYKLAKGIIENSFFELEPEAITFLQKNEPPVYPVGPLVNEDSINNGSEFDVCFQWLDEQPHGSVIFVNFGSEGILTSAQTDEIAYGLEMSEQRFLWVLRED