Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59962.t1 | XP_003609375.2 | 93.2 | 604 | 38 | 1 | 1 | 604 | 1 | 601 | 0.00E+00 | 1091.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59962.t1 | Q8S9J8 | 56.0 | 643 | 229 | 10 | 5 | 604 | 4 | 635 | 2.1e-183 | 643.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59962.t1 | G7JE64 | 93.2 | 604 | 38 | 1 | 1 | 604 | 1 | 601 | 0.0e+00 | 1091.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052016 | MS.gene59962 | 0.832551 | 8.86E-56 | -1.69E-46 |
MS.gene052296 | MS.gene59962 | 0.813914 | 2.01E-51 | -1.69E-46 |
MS.gene054617 | MS.gene59962 | 0.804308 | 2.30E-49 | -1.69E-46 |
MS.gene060811 | MS.gene59962 | 0.972506 | 7.08E-135 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59962.t1 | MTR_4g114960 | 95.695 | 604 | 23 | 1 | 1 | 604 | 1 | 601 | 0.0 | 1196 |
MS.gene59962.t1 | MTR_3g106900 | 56.462 | 650 | 228 | 8 | 1 | 604 | 1 | 641 | 0.0 | 704 |
MS.gene59962.t1 | MTR_2g008170 | 40.600 | 633 | 317 | 10 | 1 | 601 | 1 | 606 | 2.09e-151 | 449 |
MS.gene59962.t1 | MTR_8g008860 | 41.385 | 621 | 311 | 13 | 1 | 601 | 1 | 588 | 4.65e-151 | 448 |
MS.gene59962.t1 | MTR_3g080490 | 43.030 | 330 | 171 | 4 | 3 | 329 | 2 | 317 | 4.55e-90 | 298 |
MS.gene59962.t1 | MTR_4g115420 | 27.758 | 562 | 305 | 14 | 4 | 544 | 7 | 488 | 7.84e-64 | 219 |
MS.gene59962.t1 | MTR_2g037980 | 34.242 | 330 | 201 | 6 | 4 | 330 | 5 | 321 | 1.96e-60 | 211 |
MS.gene59962.t1 | MTR_4g127440 | 34.579 | 321 | 190 | 7 | 5 | 319 | 6 | 312 | 7.82e-56 | 199 |
MS.gene59962.t1 | MTR_8g106040 | 31.790 | 324 | 203 | 4 | 6 | 324 | 5 | 315 | 1.31e-42 | 159 |
MS.gene59962.t1 | MTR_0530s0020 | 25.347 | 288 | 193 | 4 | 32 | 317 | 17 | 284 | 6.61e-29 | 121 |
MS.gene59962.t1 | MTR_6g059380 | 28.076 | 317 | 197 | 5 | 4 | 314 | 7 | 298 | 6.29e-24 | 106 |
MS.gene59962.t1 | MTR_1g033880 | 26.814 | 317 | 176 | 10 | 7 | 305 | 8 | 286 | 1.56e-23 | 103 |
MS.gene59962.t1 | MTR_4g115770 | 81.250 | 32 | 6 | 0 | 110 | 141 | 19 | 50 | 2.08e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59962.t1 | AT4G32285 | 54.224 | 651 | 228 | 9 | 5 | 604 | 4 | 635 | 0.0 | 654 |
MS.gene59962.t1 | AT4G32285 | 54.224 | 651 | 228 | 9 | 5 | 604 | 4 | 635 | 0.0 | 654 |
MS.gene59962.t1 | AT2G25430 | 53.604 | 666 | 234 | 12 | 1 | 604 | 1 | 653 | 0.0 | 634 |
MS.gene59962.t1 | AT1G03050 | 42.810 | 612 | 283 | 12 | 1 | 572 | 1 | 585 | 2.47e-167 | 490 |
MS.gene59962.t1 | AT4G02650 | 43.042 | 618 | 305 | 10 | 1 | 587 | 1 | 602 | 7.31e-159 | 469 |
MS.gene59962.t1 | AT1G05020 | 43.030 | 330 | 174 | 4 | 3 | 319 | 2 | 330 | 3.79e-86 | 281 |
MS.gene59962.t1 | AT1G14910 | 31.148 | 549 | 307 | 15 | 7 | 540 | 8 | 500 | 2.17e-74 | 251 |
MS.gene59962.t1 | AT4G25940 | 30.473 | 571 | 315 | 17 | 4 | 539 | 5 | 528 | 4.25e-71 | 240 |
MS.gene59962.t1 | AT1G14910 | 30.783 | 549 | 304 | 16 | 7 | 540 | 8 | 495 | 2.47e-70 | 240 |
MS.gene59962.t1 | AT5G57200 | 30.466 | 558 | 326 | 15 | 4 | 539 | 5 | 522 | 6.90e-69 | 234 |
MS.gene59962.t1 | AT2G01600 | 30.331 | 544 | 308 | 17 | 7 | 536 | 8 | 494 | 7.91e-68 | 231 |
MS.gene59962.t1 | AT5G35200 | 26.281 | 605 | 365 | 15 | 6 | 603 | 11 | 541 | 5.99e-57 | 201 |
MS.gene59962.t1 | AT5G35200 | 26.281 | 605 | 365 | 15 | 6 | 603 | 11 | 541 | 5.99e-57 | 201 |
MS.gene59962.t1 | AT1G33340 | 31.111 | 315 | 186 | 6 | 6 | 312 | 9 | 300 | 3.89e-27 | 114 |
MS.gene59962.t1 | AT1G25240 | 24.679 | 312 | 198 | 6 | 7 | 312 | 5 | 285 | 5.12e-20 | 92.8 |
MS.gene59962.t1 | AT1G25240 | 24.679 | 312 | 198 | 7 | 7 | 312 | 6 | 286 | 5.17e-20 | 92.8 |
MS.gene59962.t1 | AT1G68110 | 24.214 | 318 | 202 | 7 | 7 | 315 | 5 | 292 | 5.15e-19 | 89.7 |
MS.gene59962.t1 | AT2G01920 | 24.444 | 315 | 181 | 9 | 7 | 315 | 9 | 272 | 6.92e-13 | 70.5 |
Find 160 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATTCTCGACCGCGTATT+AGG | 0.219216 | 8.3:+12387027 | MS.gene59962:CDS |
CAGACACCGGCGGCTGAAAT+AGG | 0.226915 | 8.3:+12387708 | MS.gene59962:CDS |
TGCCAATTCATCCATCATTT+TGG | 0.231002 | 8.3:-12387232 | None:intergenic |
CTATGGTTGGTGTAAGGATA+TGG | 0.234685 | 8.3:+12387260 | MS.gene59962:CDS |
TATGCTTGTTCATAGACTTT+TGG | 0.257309 | 8.3:+12386684 | MS.gene59962:CDS |
GAAGGTTTGTGGGAAGAATT+TGG | 0.266460 | 8.3:+12387660 | MS.gene59962:CDS |
GAATCTGGGGATGCTGAATT+TGG | 0.275355 | 8.3:+12386913 | MS.gene59962:CDS |
GTCGAAACAGAAGGCTGATT+TGG | 0.279481 | 8.3:+12387776 | MS.gene59962:CDS |
AGCACCTGACCTTGAAGTTT+TGG | 0.280993 | 8.3:+12386498 | MS.gene59962:CDS |
CAACAATTATGGCAGCAATA+TGG | 0.293512 | 8.3:+12388077 | MS.gene59962:CDS |
GATGAATTGGCAGGCTTCTA+TGG | 0.295295 | 8.3:+12387243 | MS.gene59962:CDS |
AATGAAAGCTGAGAGGGTTT+TGG | 0.301505 | 8.3:+12386984 | MS.gene59962:CDS |
ATGAGGCTCATTCTAGTTCT+TGG | 0.304967 | 8.3:+12386791 | MS.gene59962:CDS |
CATCAGCAGGAACTTCTTCA+TGG | 0.317266 | 8.3:-12386537 | None:intergenic |
GTTGGGAATGTTGTTGAATC+TGG | 0.331342 | 8.3:+12386898 | MS.gene59962:CDS |
TTGTTCAGGAACAACAATTA+TGG | 0.354466 | 8.3:+12388066 | MS.gene59962:CDS |
AGTTATGGAATGCCACAATT+TGG | 0.360081 | 8.3:+12388164 | MS.gene59962:CDS |
CTGAAACACCATCGTCTCTA+AGG | 0.362617 | 8.3:-12387575 | None:intergenic |
TGAGAAGAGGTTGGAGGTTA+AGG | 0.363649 | 8.3:+12387389 | MS.gene59962:CDS |
AACAATTATGGCAGCAATAT+GGG | 0.368947 | 8.3:+12388078 | MS.gene59962:CDS |
GGTGTTGATGGATAGGTTTA+TGG | 0.371722 | 8.3:+12387158 | MS.gene59962:CDS |
TGAACACGAGGAGTTTCTTT+AGG | 0.373021 | 8.3:-12387528 | None:intergenic |
ACAAGTTCCACACTTCAAAA+AGG | 0.373914 | 8.3:-12388221 | None:intergenic |
CTTTGACAACCAAAACTTCA+AGG | 0.377487 | 8.3:-12386507 | None:intergenic |
TGCAATGTATCTTGATCAAA+AGG | 0.379781 | 8.3:+12386840 | MS.gene59962:CDS |
CCACAAACCTTCTGTCTTGA+CGG | 0.384995 | 8.3:-12387649 | None:intergenic |
GTTGAAATTTGTGATGTGTT+GGG | 0.387926 | 8.3:+12387135 | MS.gene59962:CDS |
ACAGCTTGCATTGTTCCATC+TGG | 0.393155 | 8.3:-12387954 | None:intergenic |
ATATGTGCAAATAGCAGAAA+TGG | 0.394136 | 8.3:+12388025 | MS.gene59962:CDS |
GACGCCGATTCTTGCTTTGC+CGG | 0.395013 | 8.3:+12387929 | MS.gene59962:CDS |
TCGAAACAGAAGGCTGATTT+GGG | 0.400505 | 8.3:+12387777 | MS.gene59962:CDS |
TCATTGCTCCAATTGCTTTG+CGG | 0.405183 | 8.3:-12386432 | None:intergenic |
ATTGCTTTGCGGATTGTTGA+TGG | 0.406642 | 8.3:-12386421 | None:intergenic |
GAAGCAGCACTTGCTTGTTC+AGG | 0.406680 | 8.3:+12388052 | MS.gene59962:CDS |
ACCTCATTGATATCTGCTTC+TGG | 0.407260 | 8.3:-12387435 | None:intergenic |
AATCTTACATCTTATTCTAA+AGG | 0.407578 | 8.3:+12386583 | MS.gene59962:CDS |
CTGAAATAGGGAAAGCAGAT+TGG | 0.410553 | 8.3:+12387721 | MS.gene59962:CDS |
TCAGCTTTCATTTCCCTCAC+AGG | 0.417821 | 8.3:-12386973 | None:intergenic |
TCAACAATCCGCAAAGCAAT+TGG | 0.418299 | 8.3:+12386424 | MS.gene59962:CDS |
CTTGCTTTGCCGGCTCCAGA+TGG | 0.419646 | 8.3:+12387939 | MS.gene59962:CDS |
GACACTTGAGGGTTTCTTGA+AGG | 0.419795 | 8.3:+12387341 | MS.gene59962:CDS |
AAGAAGAAATTGAAAAGTGT+TGG | 0.420364 | 8.3:+12386880 | MS.gene59962:CDS |
ATGGTGCTGCTAAGAATAAT+AGG | 0.420414 | 8.3:+12387061 | MS.gene59962:CDS |
TTCCAAAATGATGGATGAAT+TGG | 0.426253 | 8.3:+12387230 | MS.gene59962:CDS |
GTCGCACTCTTACCAATTCC+AGG | 0.429182 | 8.3:-12387909 | None:intergenic |
AGACACCGGCGGCTGAAATA+GGG | 0.430463 | 8.3:+12387709 | MS.gene59962:CDS |
TGTTGAAATTTGTGATGTGT+TGG | 0.434833 | 8.3:+12387134 | MS.gene59962:CDS |
ATGCCACAATTTGGTGGGAT+TGG | 0.436110 | 8.3:+12388173 | MS.gene59962:CDS |
CAGCTTTCATTTCCCTCACA+GGG | 0.437925 | 8.3:-12386972 | None:intergenic |
TAAAACTATCCCTCACAATC+TGG | 0.438866 | 8.3:-12387104 | None:intergenic |
GGCATTCCATAACTCATCAT+AGG | 0.441011 | 8.3:-12388155 | None:intergenic |
TGAGGCTCATTCTAGTTCTT+GGG | 0.441565 | 8.3:+12386792 | MS.gene59962:CDS |
GATGGATAGGTTTATGGAAA+TGG | 0.444981 | 8.3:+12387164 | MS.gene59962:CDS |
TTGAAATTTGTGATGTGTTG+GGG | 0.446185 | 8.3:+12387136 | MS.gene59962:CDS |
TTTGATTCACTTGTATTGAA+TGG | 0.446884 | 8.3:+12387807 | MS.gene59962:CDS |
ACAGACAGTGATGCTGCAAA+TGG | 0.448668 | 8.3:-12387990 | None:intergenic |
CTTACGTATTTGTCATCAGC+AGG | 0.451659 | 8.3:-12386550 | None:intergenic |
TGTTAGTGCTTCCAAAATGA+TGG | 0.451763 | 8.3:+12387221 | MS.gene59962:CDS |
ACAGGAGGTTGTTGCGGTCG+AGG | 0.455057 | 8.3:-12387495 | None:intergenic |
AGTGTGGCATTACCTGGAAT+TGG | 0.461532 | 8.3:+12387897 | MS.gene59962:CDS |
TTGGGAATGTTGTTGAATCT+GGG | 0.461750 | 8.3:+12386899 | MS.gene59962:CDS |
AAATTCTTCACCTCAGGCGC+TGG | 0.463279 | 8.3:-12387468 | None:intergenic |
TCACAACCTATGATGAGTTA+TGG | 0.465190 | 8.3:+12388149 | MS.gene59962:CDS |
TCTGCTATTTGCACATATGA+AGG | 0.468165 | 8.3:-12388020 | None:intergenic |
ATCAGCATAGCAAAAGTTGC+TGG | 0.469689 | 8.3:+12386469 | MS.gene59962:CDS |
TGGCAGCAATATGGGAGAGA+TGG | 0.469904 | 8.3:+12388086 | MS.gene59962:CDS |
ACAATTTCATCCTCAAATGA+AGG | 0.470020 | 8.3:-12386718 | None:intergenic |
CCGTCAAGACAGAAGGTTTG+TGG | 0.470020 | 8.3:+12387649 | MS.gene59962:CDS |
TCTAGTTCTTGGGATCATGC+TGG | 0.471723 | 8.3:+12386802 | MS.gene59962:CDS |
AGAAGAAATTGAAAAGTGTT+GGG | 0.472704 | 8.3:+12386881 | MS.gene59962:CDS |
GCTAGTAGTGTGGCATTACC+TGG | 0.474130 | 8.3:+12387891 | MS.gene59962:CDS |
CAAAGCAATTGGAGCAATGA+AGG | 0.474529 | 8.3:+12386435 | MS.gene59962:CDS |
GGTGTTAAATTCTTCACCTC+AGG | 0.474870 | 8.3:-12387474 | None:intergenic |
TGATGGCCACCCTTCATTTG+AGG | 0.483163 | 8.3:+12386708 | MS.gene59962:CDS |
TTAACCTCCAACCTCTTCTC+AGG | 0.483672 | 8.3:-12387387 | None:intergenic |
TCTTTAGGCTGCGGAGCCAC+AGG | 0.488305 | 8.3:-12387513 | None:intergenic |
CAGAAGGCTGATTTGGGAGG+TGG | 0.489303 | 8.3:+12387783 | MS.gene59962:CDS |
TGAAATAGGGAAAGCAGATT+GGG | 0.491972 | 8.3:+12387722 | MS.gene59962:CDS |
TGCATTGTTCCATCTGGAGC+CGG | 0.496842 | 8.3:-12387948 | None:intergenic |
ACAACCAAAACTTCAAGGTC+AGG | 0.498743 | 8.3:-12386502 | None:intergenic |
CAAGTGGGTTTAACAAGGGT+TGG | 0.502262 | 8.3:+12388119 | MS.gene59962:CDS |
GGTTTAACAAGGGTTGGAGC+TGG | 0.502377 | 8.3:+12388125 | MS.gene59962:CDS |
TATGGTTGGTGTAAGGATAT+GGG | 0.503323 | 8.3:+12387261 | MS.gene59962:CDS |
AGGCTTCTATGGTTGGTGTA+AGG | 0.509267 | 8.3:+12387254 | MS.gene59962:CDS |
AATTGGCAGGCTTCTATGGT+TGG | 0.517810 | 8.3:+12387247 | MS.gene59962:CDS |
GGCAGCAATATGGGAGAGAT+GGG | 0.520420 | 8.3:+12388087 | MS.gene59962:CDS |
ACAAGGCAATAAATTTGCAT+TGG | 0.521522 | 8.3:+12387605 | MS.gene59962:CDS |
CAGACAGTGATGCTGCAAAT+GGG | 0.527554 | 8.3:-12387989 | None:intergenic |
GCTTTCCCTATTTCAGCCGC+CGG | 0.527983 | 8.3:-12387714 | None:intergenic |
AGCAGATTGGGAATTAGCAT+TGG | 0.530343 | 8.3:+12387734 | MS.gene59962:CDS |
CGAGGAGTTTCTTTAGGCTG+CGG | 0.535656 | 8.3:-12387522 | None:intergenic |
ATGCCACTCGTAGTGGAATG+AGG | 0.536630 | 8.3:+12386743 | MS.gene59962:CDS |
GGAGCCGGCAAAGCAAGAAT+CGG | 0.539183 | 8.3:-12387933 | None:intergenic |
AGATTGGGAATTAGCATTGG+TGG | 0.546066 | 8.3:+12387737 | MS.gene59962:CDS |
AAGGTCAAGTGGGTTTAACA+AGG | 0.546870 | 8.3:+12388114 | MS.gene59962:CDS |
GAAGGCTCTTCCAGCGCCTG+AGG | 0.551250 | 8.3:+12387458 | MS.gene59962:CDS |
TATGGAATGCCACAATTTGG+TGG | 0.551750 | 8.3:+12388167 | MS.gene59962:CDS |
AAAGAGTCCTGAGAAGAGGT+TGG | 0.551868 | 8.3:+12387380 | MS.gene59962:CDS |
TAAGAATAATAGGTTAGTGT+TGG | 0.553267 | 8.3:+12387071 | MS.gene59962:CDS |
ATGGAATGCCACAATTTGGT+GGG | 0.554732 | 8.3:+12388168 | MS.gene59962:CDS |
GAACAAAGAGTCCTGAGAAG+AGG | 0.555312 | 8.3:+12387376 | MS.gene59962:CDS |
CGTCAAGACAGAAGGTTTGT+GGG | 0.556434 | 8.3:+12387650 | MS.gene59962:CDS |
AGCAGATATCAATGAGGTGA+AGG | 0.562071 | 8.3:+12387440 | MS.gene59962:CDS |
TGGGAATGTTGTTGAATCTG+GGG | 0.565539 | 8.3:+12386900 | MS.gene59962:CDS |
AGATGGGATGCAAGGTCAAG+TGG | 0.567578 | 8.3:+12388103 | MS.gene59962:CDS |
TGGTTCTGTGAAGAAGAATG+AGG | 0.569960 | 8.3:+12386933 | MS.gene59962:CDS |
TTTGGTGGGATTGGACAACC+TGG | 0.572922 | 8.3:+12388182 | MS.gene59962:CDS |
GCTTCGACCGTCAAGACAGA+AGG | 0.573026 | 8.3:+12387642 | MS.gene59962:CDS |
ATTGTTCATGCCACTCGTAG+TGG | 0.574986 | 8.3:+12386736 | MS.gene59962:CDS |
GGTGCATTGTAGTAGCCTCC+AGG | 0.576934 | 8.3:-12388200 | None:intergenic |
TGCCACTCGTAGTGGAATGA+GGG | 0.578106 | 8.3:+12386744 | MS.gene59962:CDS |
CCTCGTGTTCAACAAGAGAC+AGG | 0.580723 | 8.3:+12387540 | MS.gene59962:CDS |
TGAAATTTGTGATGTGTTGG+GGG | 0.582206 | 8.3:+12387137 | MS.gene59962:CDS |
TAGTAATCTGTCGAAACAGA+AGG | 0.582861 | 8.3:+12387767 | MS.gene59962:CDS |
AAAATGATGGATGAATTGGC+AGG | 0.583427 | 8.3:+12387234 | MS.gene59962:CDS |
TGCAAATAGCAGAAATGGAG+AGG | 0.586410 | 8.3:+12388030 | MS.gene59962:CDS |
GACTTCAGCATGGCAGACAC+CGG | 0.586939 | 8.3:+12387695 | MS.gene59962:CDS |
CTGCCATGCTGAAGTCACTT+CGG | 0.587835 | 8.3:-12387688 | None:intergenic |
CAATTTCATCCTCAAATGAA+GGG | 0.588500 | 8.3:-12386717 | None:intergenic |
TTGAATGGAATGTATGATCA+AGG | 0.590955 | 8.3:+12387822 | MS.gene59962:CDS |
AAATGATGCTACCCCTGTGA+GGG | 0.591720 | 8.3:+12386960 | MS.gene59962:CDS |
TGTCCAATCCCACCAAATTG+TGG | 0.594722 | 8.3:-12388176 | None:intergenic |
TTGCGATTTACCAGATTGTG+AGG | 0.594904 | 8.3:+12387094 | MS.gene59962:CDS |
GAGTCCTGAGAAGAGGTTGG+AGG | 0.595271 | 8.3:+12387383 | MS.gene59962:CDS |
GTAAGGATATGGGTATTGCT+AGG | 0.595941 | 8.3:+12387271 | MS.gene59962:CDS |
CCTGTCTCTTGTTGAACACG+AGG | 0.596634 | 8.3:-12387540 | None:intergenic |
TTAGGCTGCGGAGCCACAGG+AGG | 0.598625 | 8.3:-12387510 | None:intergenic |
AGCACTAACATAAAACTCAA+AGG | 0.600537 | 8.3:-12387208 | None:intergenic |
TATGGGAGAGATGGGATGCA+AGG | 0.609305 | 8.3:+12388095 | MS.gene59962:CDS |
GATGGAACAATGCAAGCTGT+AGG | 0.610741 | 8.3:+12387957 | MS.gene59962:CDS |
TGCGATTTACCAGATTGTGA+GGG | 0.612559 | 8.3:+12387095 | MS.gene59962:CDS |
GAGGGAAATGAAAGCTGAGA+GGG | 0.612777 | 8.3:+12386978 | MS.gene59962:CDS |
ATTTGCACATATGAAGGTGG+CGG | 0.616726 | 8.3:-12388014 | None:intergenic |
TCGACCGCAACAACCTCCTG+TGG | 0.619993 | 8.3:+12387497 | MS.gene59962:CDS |
GGTGTTTCAGCTGATGAACA+AGG | 0.621449 | 8.3:+12387588 | MS.gene59962:CDS |
AACCCTCATTCCACTACGAG+TGG | 0.623104 | 8.3:-12386746 | None:intergenic |
GCTATTTGCACATATGAAGG+TGG | 0.631483 | 8.3:-12388017 | None:intergenic |
TTCAGCATGGCAGACACCGG+CGG | 0.632626 | 8.3:+12387698 | MS.gene59962:CDS |
TGGTGGGAGTGCTAGTAGTG+TGG | 0.638295 | 8.3:+12387881 | MS.gene59962:CDS |
AGCACAACTGAGGTGAGTGG+TGG | 0.638502 | 8.3:+12387864 | MS.gene59962:CDS |
GATGGGATGCAAGGTCAAGT+GGG | 0.639308 | 8.3:+12388104 | MS.gene59962:CDS |
AAACAGAAGGCTGATTTGGG+AGG | 0.641181 | 8.3:+12387780 | MS.gene59962:CDS |
AGGTCAAGTGGGTTTAACAA+GGG | 0.654548 | 8.3:+12388115 | MS.gene59962:CDS |
GGAGCCACAGGAGGTTGTTG+CGG | 0.659960 | 8.3:-12387501 | None:intergenic |
CTGCACTTCAGGGTACTCAG+AGG | 0.671672 | 8.3:-12387295 | None:intergenic |
AATGCAAGCTGTAGGAACGC+AGG | 0.672904 | 8.3:+12387965 | MS.gene59962:CDS |
GCACAACTGAGGTGAGTGGT+GGG | 0.673965 | 8.3:+12387865 | MS.gene59962:CDS |
TTAGTGAACCTTAGAGACGA+TGG | 0.680919 | 8.3:+12387567 | MS.gene59962:CDS |
AAAATGATGCTACCCCTGTG+AGG | 0.683408 | 8.3:+12386959 | MS.gene59962:CDS |
TTTCATCCTCAAATGAAGGG+TGG | 0.684301 | 8.3:-12386714 | None:intergenic |
AGCTTTCATTTCCCTCACAG+GGG | 0.685348 | 8.3:-12386971 | None:intergenic |
CATCCGAAGTGACTTCAGCA+TGG | 0.685535 | 8.3:+12387685 | MS.gene59962:CDS |
TGAGGGAAATGAAAGCTGAG+AGG | 0.694516 | 8.3:+12386977 | MS.gene59962:CDS |
TTATTCTTAGCAGCACCATG+TGG | 0.695497 | 8.3:-12387057 | None:intergenic |
GGTGGGATTGGACAACCTGG+AGG | 0.697071 | 8.3:+12388185 | MS.gene59962:CDS |
GCCAGAAGCAGATATCAATG+AGG | 0.701216 | 8.3:+12387434 | MS.gene59962:CDS |
GTATTAGGTTGTAAACCACA+TGG | 0.701935 | 8.3:+12387042 | MS.gene59962:CDS |
GTGAGCACAACTGAGGTGAG+TGG | 0.742823 | 8.3:+12387861 | MS.gene59962:CDS |
GTGGTTTACAACCTAATACG+CGG | 0.755539 | 8.3:-12387038 | None:intergenic |
ACAACATGTGAGCACAACTG+AGG | 0.771312 | 8.3:+12387854 | MS.gene59962:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCTTACATCTTATTCTAA+AGG | + | chr8.3:12386583-12386602 | MS.gene59962:CDS | 20.0% |
! | TAAGAATAATAGGTTAGTGT+TGG | + | chr8.3:12387071-12387090 | MS.gene59962:CDS | 25.0% |
! | TTTGATTCACTTGTATTGAA+TGG | + | chr8.3:12387807-12387826 | MS.gene59962:CDS | 25.0% |
!! | AAGAAGAAATTGAAAAGTGT+TGG | + | chr8.3:12386880-12386899 | MS.gene59962:CDS | 25.0% |
!! | TGATCAAAAGGTTGAATTTT+TGG | + | chr8.3:12386852-12386871 | MS.gene59962:CDS | 25.0% |
!!! | AGAAGAAATTGAAAAGTGTT+GGG | + | chr8.3:12386881-12386900 | MS.gene59962:CDS | 25.0% |
AACAATTATGGCAGCAATAT+GGG | + | chr8.3:12388078-12388097 | MS.gene59962:CDS | 30.0% | |
ACAAGGCAATAAATTTGCAT+TGG | + | chr8.3:12387605-12387624 | MS.gene59962:CDS | 30.0% | |
ACAATTTCATCCTCAAATGA+AGG | - | chr8.3:12386721-12386740 | None:intergenic | 30.0% | |
AGCACTAACATAAAACTCAA+AGG | - | chr8.3:12387211-12387230 | None:intergenic | 30.0% | |
ATATGTGCAAATAGCAGAAA+TGG | + | chr8.3:12388025-12388044 | MS.gene59962:CDS | 30.0% | |
CAATTTCATCCTCAAATGAA+GGG | - | chr8.3:12386720-12386739 | None:intergenic | 30.0% | |
GATTAACAAAAACTCGTGAT+TGG | + | chr8.3:12386641-12386660 | MS.gene59962:CDS | 30.0% | |
GTTGAAATTTGTGATGTGTT+GGG | + | chr8.3:12387135-12387154 | MS.gene59962:CDS | 30.0% | |
TGCAATGTATCTTGATCAAA+AGG | + | chr8.3:12386840-12386859 | MS.gene59962:CDS | 30.0% | |
TGTTGAAATTTGTGATGTGT+TGG | + | chr8.3:12387134-12387153 | MS.gene59962:CDS | 30.0% | |
TTGAAATTTGTGATGTGTTG+GGG | + | chr8.3:12387136-12387155 | MS.gene59962:CDS | 30.0% | |
TTGAATGGAATGTATGATCA+AGG | + | chr8.3:12387822-12387841 | MS.gene59962:CDS | 30.0% | |
TTGTTCAGGAACAACAATTA+TGG | + | chr8.3:12388066-12388085 | MS.gene59962:CDS | 30.0% | |
! | AAAATCACTGACAGTCTTTT+AGG | + | chr8.3:12387318-12387337 | MS.gene59962:CDS | 30.0% |
! | AAATCACTGACAGTCTTTTA+GGG | + | chr8.3:12387319-12387338 | MS.gene59962:CDS | 30.0% |
! | TATGCTTGTTCATAGACTTT+TGG | + | chr8.3:12386684-12386703 | MS.gene59962:CDS | 30.0% |
!! | TATGAGTGATTTTAGAGATG+AGG | + | chr8.3:12386774-12386793 | MS.gene59962:CDS | 30.0% |
!! | TTCCAAAATGATGGATGAAT+TGG | + | chr8.3:12387230-12387249 | MS.gene59962:CDS | 30.0% |
AGTTATGGAATGCCACAATT+TGG | + | chr8.3:12388164-12388183 | MS.gene59962:CDS | 35.0% | |
CAACAATTATGGCAGCAATA+TGG | + | chr8.3:12388077-12388096 | MS.gene59962:CDS | 35.0% | |
CTTTGACAACCAAAACTTCA+AGG | - | chr8.3:12386510-12386529 | None:intergenic | 35.0% | |
GATGGATAGGTTTATGGAAA+TGG | + | chr8.3:12387164-12387183 | MS.gene59962:CDS | 35.0% | |
TAAAACTATCCCTCACAATC+TGG | - | chr8.3:12387107-12387126 | None:intergenic | 35.0% | |
TAGTAATCTGTCGAAACAGA+AGG | + | chr8.3:12387767-12387786 | MS.gene59962:CDS | 35.0% | |
TCACAACCTATGATGAGTTA+TGG | + | chr8.3:12388149-12388168 | MS.gene59962:CDS | 35.0% | |
TGAAATAGGGAAAGCAGATT+GGG | + | chr8.3:12387722-12387741 | MS.gene59962:CDS | 35.0% | |
TGAAATTTGTGATGTGTTGG+GGG | + | chr8.3:12387137-12387156 | MS.gene59962:CDS | 35.0% | |
TGTTAGTGCTTCCAAAATGA+TGG | + | chr8.3:12387221-12387240 | MS.gene59962:CDS | 35.0% | |
TTGGGAATGTTGTTGAATCT+GGG | + | chr8.3:12386899-12386918 | MS.gene59962:CDS | 35.0% | |
! | GTATTAGGTTGTAAACCACA+TGG | + | chr8.3:12387042-12387061 | MS.gene59962:CDS | 35.0% |
! | TATGGTTGGTGTAAGGATAT+GGG | + | chr8.3:12387261-12387280 | MS.gene59962:CDS | 35.0% |
! | TCTGCTATTTGCACATATGA+AGG | - | chr8.3:12388023-12388042 | None:intergenic | 35.0% |
! | TGCCAATTCATCCATCATTT+TGG | - | chr8.3:12387235-12387254 | None:intergenic | 35.0% |
!! | AAAATGATGGATGAATTGGC+AGG | + | chr8.3:12387234-12387253 | MS.gene59962:CDS | 35.0% |
!! | ATGGTGCTGCTAAGAATAAT+AGG | + | chr8.3:12387061-12387080 | MS.gene59962:CDS | 35.0% |
!! | GTTCATAGACTTTTGGTTGA+TGG | + | chr8.3:12386691-12386710 | MS.gene59962:CDS | 35.0% |
!! | TTTGCATTGGCATTGTTTTC+TGG | + | chr8.3:12387618-12387637 | MS.gene59962:CDS | 35.0% |
ACAACCAAAACTTCAAGGTC+AGG | - | chr8.3:12386505-12386524 | None:intergenic | 40.0% | |
ACCTCATTGATATCTGCTTC+TGG | - | chr8.3:12387438-12387457 | None:intergenic | 40.0% | |
AGCAGATATCAATGAGGTGA+AGG | + | chr8.3:12387440-12387459 | MS.gene59962:CDS | 40.0% | |
AGCAGATTGGGAATTAGCAT+TGG | + | chr8.3:12387734-12387753 | MS.gene59962:CDS | 40.0% | |
ATCAGCATAGCAAAAGTTGC+TGG | + | chr8.3:12386469-12386488 | MS.gene59962:CDS | 40.0% | |
ATGGAATGCCACAATTTGGT+GGG | + | chr8.3:12388168-12388187 | MS.gene59962:CDS | 40.0% | |
ATTTGCACATATGAAGGTGG+CGG | - | chr8.3:12388017-12388036 | None:intergenic | 40.0% | |
CAAAGCAATTGGAGCAATGA+AGG | + | chr8.3:12386435-12386454 | MS.gene59962:CDS | 40.0% | |
CTGAAATAGGGAAAGCAGAT+TGG | + | chr8.3:12387721-12387740 | MS.gene59962:CDS | 40.0% | |
CTTACGTATTTGTCATCAGC+AGG | - | chr8.3:12386553-12386572 | None:intergenic | 40.0% | |
GAAGGTTTGTGGGAAGAATT+TGG | + | chr8.3:12387660-12387679 | MS.gene59962:CDS | 40.0% | |
GCTATTTGCACATATGAAGG+TGG | - | chr8.3:12388020-12388039 | None:intergenic | 40.0% | |
GGCATTCCATAACTCATCAT+AGG | - | chr8.3:12388158-12388177 | None:intergenic | 40.0% | |
GGTGTTAAATTCTTCACCTC+AGG | - | chr8.3:12387477-12387496 | None:intergenic | 40.0% | |
GTGGTTTACAACCTAATACG+CGG | - | chr8.3:12387041-12387060 | None:intergenic | 40.0% | |
GTTGGGAATGTTGTTGAATC+TGG | + | chr8.3:12386898-12386917 | MS.gene59962:CDS | 40.0% | |
TATGGAATGCCACAATTTGG+TGG | + | chr8.3:12388167-12388186 | MS.gene59962:CDS | 40.0% | |
TCAACAATCCGCAAAGCAAT+TGG | + | chr8.3:12386424-12386443 | MS.gene59962:CDS | 40.0% | |
TCATTGCTCCAATTGCTTTG+CGG | - | chr8.3:12386435-12386454 | None:intergenic | 40.0% | |
TGAACACGAGGAGTTTCTTT+AGG | - | chr8.3:12387531-12387550 | None:intergenic | 40.0% | |
TGCAAATAGCAGAAATGGAG+AGG | + | chr8.3:12388030-12388049 | MS.gene59962:CDS | 40.0% | |
TGCGATTTACCAGATTGTGA+GGG | + | chr8.3:12387095-12387114 | MS.gene59962:CDS | 40.0% | |
TGGGAATGTTGTTGAATCTG+GGG | + | chr8.3:12386900-12386919 | MS.gene59962:CDS | 40.0% | |
TTAGTGAACCTTAGAGACGA+TGG | + | chr8.3:12387567-12387586 | MS.gene59962:CDS | 40.0% | |
TTATTCTTAGCAGCACCATG+TGG | - | chr8.3:12387060-12387079 | None:intergenic | 40.0% | |
TTGCGATTTACCAGATTGTG+AGG | + | chr8.3:12387094-12387113 | MS.gene59962:CDS | 40.0% | |
TTTCATCCTCAAATGAAGGG+TGG | - | chr8.3:12386717-12386736 | None:intergenic | 40.0% | |
! | AAGGTCAAGTGGGTTTAACA+AGG | + | chr8.3:12388114-12388133 | MS.gene59962:CDS | 40.0% |
! | AATGAAAGCTGAGAGGGTTT+TGG | + | chr8.3:12386984-12387003 | MS.gene59962:CDS | 40.0% |
! | AGATTGGGAATTAGCATTGG+TGG | + | chr8.3:12387737-12387756 | MS.gene59962:CDS | 40.0% |
! | AGGTCAAGTGGGTTTAACAA+GGG | + | chr8.3:12388115-12388134 | MS.gene59962:CDS | 40.0% |
! | ATTGCTTTGCGGATTGTTGA+TGG | - | chr8.3:12386424-12386443 | None:intergenic | 40.0% |
! | CAGTGATTTTCTGCACTTCA+GGG | - | chr8.3:12387308-12387327 | None:intergenic | 40.0% |
! | CTATGGTTGGTGTAAGGATA+TGG | + | chr8.3:12387260-12387279 | MS.gene59962:CDS | 40.0% |
! | GTAAGGATATGGGTATTGCT+AGG | + | chr8.3:12387271-12387290 | MS.gene59962:CDS | 40.0% |
! | TCAGTGATTTTCTGCACTTC+AGG | - | chr8.3:12387309-12387328 | None:intergenic | 40.0% |
! | TCGAAACAGAAGGCTGATTT+GGG | + | chr8.3:12387777-12387796 | MS.gene59962:CDS | 40.0% |
! | TGGTTCTGTGAAGAAGAATG+AGG | + | chr8.3:12386933-12386952 | MS.gene59962:CDS | 40.0% |
!! | AGTCTTTTAGGGACACTTGA+GGG | + | chr8.3:12387330-12387349 | MS.gene59962:CDS | 40.0% |
!! | ATGAGGCTCATTCTAGTTCT+TGG | + | chr8.3:12386791-12386810 | MS.gene59962:CDS | 40.0% |
!! | GGTGTTGATGGATAGGTTTA+TGG | + | chr8.3:12387158-12387177 | MS.gene59962:CDS | 40.0% |
!! | TGAGGCTCATTCTAGTTCTT+GGG | + | chr8.3:12386792-12386811 | MS.gene59962:CDS | 40.0% |
!!! | GGATCATGCTGGTTTTGTTA+GGG | + | chr8.3:12386813-12386832 | MS.gene59962:CDS | 40.0% |
AAAATGATGCTACCCCTGTG+AGG | + | chr8.3:12386959-12386978 | MS.gene59962:CDS | 45.0% | |
AAAGAGTCCTGAGAAGAGGT+TGG | + | chr8.3:12387380-12387399 | MS.gene59962:CDS | 45.0% | |
AAATGATGCTACCCCTGTGA+GGG | + | chr8.3:12386960-12386979 | MS.gene59962:CDS | 45.0% | |
AATTGGCAGGCTTCTATGGT+TGG | + | chr8.3:12387247-12387266 | MS.gene59962:CDS | 45.0% | |
ACAACATGTGAGCACAACTG+AGG | + | chr8.3:12387854-12387873 | MS.gene59962:CDS | 45.0% | |
ACAGACAGTGATGCTGCAAA+TGG | - | chr8.3:12387993-12388012 | None:intergenic | 45.0% | |
ACAGCTTGCATTGTTCCATC+TGG | - | chr8.3:12387957-12387976 | None:intergenic | 45.0% | |
AGCTTTCATTTCCCTCACAG+GGG | - | chr8.3:12386974-12386993 | None:intergenic | 45.0% | |
AGTGTGGCATTACCTGGAAT+TGG | + | chr8.3:12387897-12387916 | MS.gene59962:CDS | 45.0% | |
ATTGTTCATGCCACTCGTAG+TGG | + | chr8.3:12386736-12386755 | MS.gene59962:CDS | 45.0% | |
CAAATTCTCGACCGCGTATT+AGG | + | chr8.3:12387027-12387046 | MS.gene59962:CDS | 45.0% | |
CAGACAGTGATGCTGCAAAT+GGG | - | chr8.3:12387992-12388011 | None:intergenic | 45.0% | |
CAGCTTTCATTTCCCTCACA+GGG | - | chr8.3:12386975-12386994 | None:intergenic | 45.0% | |
CATCAGCAGGAACTTCTTCA+TGG | - | chr8.3:12386540-12386559 | None:intergenic | 45.0% | |
CCACAAACCTTCTGTCTTGA+CGG | - | chr8.3:12387652-12387671 | None:intergenic | 45.0% | |
CGTCAAGACAGAAGGTTTGT+GGG | + | chr8.3:12387650-12387669 | MS.gene59962:CDS | 45.0% | |
CTGAAACACCATCGTCTCTA+AGG | - | chr8.3:12387578-12387597 | None:intergenic | 45.0% | |
GAACAAAGAGTCCTGAGAAG+AGG | + | chr8.3:12387376-12387395 | MS.gene59962:CDS | 45.0% | |
GAATCTGGGGATGCTGAATT+TGG | + | chr8.3:12386913-12386932 | MS.gene59962:CDS | 45.0% | |
GACACTTGAGGGTTTCTTGA+AGG | + | chr8.3:12387341-12387360 | MS.gene59962:CDS | 45.0% | |
GAGGGAAATGAAAGCTGAGA+GGG | + | chr8.3:12386978-12386997 | MS.gene59962:CDS | 45.0% | |
GATGAATTGGCAGGCTTCTA+TGG | + | chr8.3:12387243-12387262 | MS.gene59962:CDS | 45.0% | |
GATGGAACAATGCAAGCTGT+AGG | + | chr8.3:12387957-12387976 | MS.gene59962:CDS | 45.0% | |
GCCAGAAGCAGATATCAATG+AGG | + | chr8.3:12387434-12387453 | MS.gene59962:CDS | 45.0% | |
GGTGTTTCAGCTGATGAACA+AGG | + | chr8.3:12387588-12387607 | MS.gene59962:CDS | 45.0% | |
GTCGAAACAGAAGGCTGATT+TGG | + | chr8.3:12387776-12387795 | MS.gene59962:CDS | 45.0% | |
TCAGCTTTCATTTCCCTCAC+AGG | - | chr8.3:12386976-12386995 | None:intergenic | 45.0% | |
TGAGAAGAGGTTGGAGGTTA+AGG | + | chr8.3:12387389-12387408 | MS.gene59962:CDS | 45.0% | |
TGAGGGAAATGAAAGCTGAG+AGG | + | chr8.3:12386977-12386996 | MS.gene59962:CDS | 45.0% | |
TGTCCAATCCCACCAAATTG+TGG | - | chr8.3:12388179-12388198 | None:intergenic | 45.0% | |
TTAACCTCCAACCTCTTCTC+AGG | - | chr8.3:12387390-12387409 | None:intergenic | 45.0% | |
! | AGCACCTGACCTTGAAGTTT+TGG | + | chr8.3:12386498-12386517 | MS.gene59962:CDS | 45.0% |
! | AGGCTTCTATGGTTGGTGTA+AGG | + | chr8.3:12387254-12387273 | MS.gene59962:CDS | 45.0% |
! | ATGCCACAATTTGGTGGGAT+TGG | + | chr8.3:12388173-12388192 | MS.gene59962:CDS | 45.0% |
! | CAAGTGGGTTTAACAAGGGT+TGG | + | chr8.3:12388119-12388138 | MS.gene59962:CDS | 45.0% |
!! | AAACAGAAGGCTGATTTGGG+AGG | + | chr8.3:12387780-12387799 | MS.gene59962:CDS | 45.0% |
!! | CAGTCTTTTAGGGACACTTG+AGG | + | chr8.3:12387329-12387348 | MS.gene59962:CDS | 45.0% |
!! | TCTAGTTCTTGGGATCATGC+TGG | + | chr8.3:12386802-12386821 | MS.gene59962:CDS | 45.0% |
!!! | AAGCTGAGAGGGTTTTGGAT+AGG | + | chr8.3:12386989-12387008 | MS.gene59962:CDS | 45.0% |
!!! | GGGATCATGCTGGTTTTGTT+AGG | + | chr8.3:12386812-12386831 | MS.gene59962:CDS | 45.0% |
AAATTCTTCACCTCAGGCGC+TGG | - | chr8.3:12387471-12387490 | None:intergenic | 50.0% | |
AACCCTCATTCCACTACGAG+TGG | - | chr8.3:12386749-12386768 | None:intergenic | 50.0% | |
AATGCAAGCTGTAGGAACGC+AGG | + | chr8.3:12387965-12387984 | MS.gene59962:CDS | 50.0% | |
AGATGGGATGCAAGGTCAAG+TGG | + | chr8.3:12388103-12388122 | MS.gene59962:CDS | 50.0% | |
CATCCGAAGTGACTTCAGCA+TGG | + | chr8.3:12387685-12387704 | MS.gene59962:CDS | 50.0% | |
CCGTCAAGACAGAAGGTTTG+TGG | + | chr8.3:12387649-12387668 | MS.gene59962:CDS | 50.0% | |
CCTCGTGTTCAACAAGAGAC+AGG | + | chr8.3:12387540-12387559 | MS.gene59962:CDS | 50.0% | |
CCTGTCTCTTGTTGAACACG+AGG | - | chr8.3:12387543-12387562 | None:intergenic | 50.0% | |
CGAGGAGTTTCTTTAGGCTG+CGG | - | chr8.3:12387525-12387544 | None:intergenic | 50.0% | |
CTGCCATGCTGAAGTCACTT+CGG | - | chr8.3:12387691-12387710 | None:intergenic | 50.0% | |
GAAGCAGCACTTGCTTGTTC+AGG | + | chr8.3:12388052-12388071 | MS.gene59962:CDS | 50.0% | |
GATGGGATGCAAGGTCAAGT+GGG | + | chr8.3:12388104-12388123 | MS.gene59962:CDS | 50.0% | |
GCTAGTAGTGTGGCATTACC+TGG | + | chr8.3:12387891-12387910 | MS.gene59962:CDS | 50.0% | |
GGCAGCAATATGGGAGAGAT+GGG | + | chr8.3:12388087-12388106 | MS.gene59962:CDS | 50.0% | |
GGTTTAACAAGGGTTGGAGC+TGG | + | chr8.3:12388125-12388144 | MS.gene59962:CDS | 50.0% | |
GTCGCACTCTTACCAATTCC+AGG | - | chr8.3:12387912-12387931 | None:intergenic | 50.0% | |
TATGGGAGAGATGGGATGCA+AGG | + | chr8.3:12388095-12388114 | MS.gene59962:CDS | 50.0% | |
TGATGGCCACCCTTCATTTG+AGG | + | chr8.3:12386708-12386727 | MS.gene59962:CDS | 50.0% | |
TGGCAGCAATATGGGAGAGA+TGG | + | chr8.3:12388086-12388105 | MS.gene59962:CDS | 50.0% | |
TTTGGTGGGATTGGACAACC+TGG | + | chr8.3:12388182-12388201 | MS.gene59962:CDS | 50.0% | |
! | ATGCCACTCGTAGTGGAATG+AGG | + | chr8.3:12386743-12386762 | MS.gene59962:CDS | 50.0% |
! | TGCATTGTTCCATCTGGAGC+CGG | - | chr8.3:12387951-12387970 | None:intergenic | 50.0% |
! | TGCCACTCGTAGTGGAATGA+GGG | + | chr8.3:12386744-12386763 | MS.gene59962:CDS | 50.0% |
!! | TGATGTGTTGGGGGTGTTGA+TGG | + | chr8.3:12387146-12387165 | MS.gene59962:CDS | 50.0% |
!! | TGTTGGGGGTGTTGATGGAT+AGG | + | chr8.3:12387151-12387170 | MS.gene59962:CDS | 50.0% |
AGACACCGGCGGCTGAAATA+GGG | + | chr8.3:12387709-12387728 | MS.gene59962:CDS | 55.0% | |
AGCACAACTGAGGTGAGTGG+TGG | + | chr8.3:12387864-12387883 | MS.gene59962:CDS | 55.0% | |
GACTTCAGCATGGCAGACAC+CGG | + | chr8.3:12387695-12387714 | MS.gene59962:CDS | 55.0% | |
GAGTCCTGAGAAGAGGTTGG+AGG | + | chr8.3:12387383-12387402 | MS.gene59962:CDS | 55.0% | |
GCACAACTGAGGTGAGTGGT+GGG | + | chr8.3:12387865-12387884 | MS.gene59962:CDS | 55.0% | |
GCTTCGACCGTCAAGACAGA+AGG | + | chr8.3:12387642-12387661 | MS.gene59962:CDS | 55.0% | |
GCTTTCCCTATTTCAGCCGC+CGG | - | chr8.3:12387717-12387736 | None:intergenic | 55.0% | |
GGAGCCGGCAAAGCAAGAAT+CGG | - | chr8.3:12387936-12387955 | None:intergenic | 55.0% | |
GGTGCATTGTAGTAGCCTCC+AGG | - | chr8.3:12388203-12388222 | None:intergenic | 55.0% | |
GTGAGCACAACTGAGGTGAG+TGG | + | chr8.3:12387861-12387880 | MS.gene59962:CDS | 55.0% | |
! | CTGCACTTCAGGGTACTCAG+AGG | - | chr8.3:12387298-12387317 | None:intergenic | 55.0% |
!! | CAGAAGGCTGATTTGGGAGG+TGG | + | chr8.3:12387783-12387802 | MS.gene59962:CDS | 55.0% |
!! | GACGCCGATTCTTGCTTTGC+CGG | + | chr8.3:12387929-12387948 | MS.gene59962:CDS | 55.0% |
!! | TGGTGGGAGTGCTAGTAGTG+TGG | + | chr8.3:12387881-12387900 | MS.gene59962:CDS | 55.0% |
ACAGGAGGTTGTTGCGGTCG+AGG | - | chr8.3:12387498-12387517 | None:intergenic | 60.0% | |
CAGACACCGGCGGCTGAAAT+AGG | + | chr8.3:12387708-12387727 | MS.gene59962:CDS | 60.0% | |
GGAGCCACAGGAGGTTGTTG+CGG | - | chr8.3:12387504-12387523 | None:intergenic | 60.0% | |
GGTGGGATTGGACAACCTGG+AGG | + | chr8.3:12388185-12388204 | MS.gene59962:CDS | 60.0% | |
TCGACCGCAACAACCTCCTG+TGG | + | chr8.3:12387497-12387516 | MS.gene59962:CDS | 60.0% | |
TCTTTAGGCTGCGGAGCCAC+AGG | - | chr8.3:12387516-12387535 | None:intergenic | 60.0% | |
TTCAGCATGGCAGACACCGG+CGG | + | chr8.3:12387698-12387717 | MS.gene59962:CDS | 60.0% | |
!! | CTTGCTTTGCCGGCTCCAGA+TGG | + | chr8.3:12387939-12387958 | MS.gene59962:CDS | 60.0% |
GAAGGCTCTTCCAGCGCCTG+AGG | + | chr8.3:12387458-12387477 | MS.gene59962:CDS | 65.0% | |
TTAGGCTGCGGAGCCACAGG+AGG | - | chr8.3:12387513-12387532 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 12386415 | 12388229 | 12386415 | ID=MS.gene59962 |
chr8.3 | mRNA | 12386415 | 12388229 | 12386415 | ID=MS.gene59962.t1;Parent=MS.gene59962 |
chr8.3 | exon | 12386415 | 12388229 | 12386415 | ID=MS.gene59962.t1.exon1;Parent=MS.gene59962.t1 |
chr8.3 | CDS | 12386415 | 12388229 | 12386415 | ID=cds.MS.gene59962.t1;Parent=MS.gene59962.t1 |
Gene Sequence |
Protein sequence |