Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060811.t1 | XP_003609375.2 | 93.5 | 601 | 39 | 0 | 1 | 601 | 1 | 601 | 0.00E+00 | 1095.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060811.t1 | Q8S9J8 | 55.8 | 643 | 227 | 10 | 5 | 601 | 4 | 635 | 4.7e-183 | 642.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060811.t1 | G7JE64 | 93.5 | 601 | 39 | 0 | 1 | 601 | 1 | 601 | 0.0e+00 | 1095.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052296 | MS.gene060811 | 0.81205 | 5.15E-51 | -1.69E-46 |
| MS.gene060811 | MS.gene07104 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene060811 | MS.gene07105 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene060811 | MS.gene07107 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene060811 | MS.gene07630 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene060811 | MS.gene59962 | 0.972506 | 7.08E-135 | -1.69E-46 |
| MS.gene060811 | MS.gene60148 | 0.9791 | 3.11E-147 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060811.t1 | MTR_4g114960 | 96.007 | 601 | 24 | 0 | 1 | 601 | 1 | 601 | 0.0 | 1201 |
| MS.gene060811.t1 | MTR_3g106900 | 55.846 | 650 | 229 | 7 | 1 | 601 | 1 | 641 | 0.0 | 703 |
| MS.gene060811.t1 | MTR_2g008170 | 40.600 | 633 | 314 | 10 | 1 | 598 | 1 | 606 | 1.94e-151 | 449 |
| MS.gene060811.t1 | MTR_8g008860 | 40.575 | 626 | 306 | 13 | 1 | 598 | 1 | 588 | 1.70e-150 | 446 |
| MS.gene060811.t1 | MTR_3g080490 | 43.425 | 327 | 171 | 4 | 3 | 326 | 2 | 317 | 2.08e-90 | 299 |
| MS.gene060811.t1 | MTR_4g115420 | 27.957 | 558 | 306 | 14 | 4 | 541 | 7 | 488 | 3.50e-64 | 220 |
| MS.gene060811.t1 | MTR_2g037980 | 34.356 | 326 | 203 | 6 | 4 | 327 | 5 | 321 | 2.38e-60 | 211 |
| MS.gene060811.t1 | MTR_4g127440 | 34.906 | 318 | 190 | 7 | 5 | 316 | 6 | 312 | 3.49e-56 | 199 |
| MS.gene060811.t1 | MTR_8g106040 | 31.776 | 321 | 204 | 4 | 6 | 321 | 5 | 315 | 2.33e-42 | 158 |
| MS.gene060811.t1 | MTR_0530s0020 | 24.476 | 286 | 195 | 3 | 32 | 314 | 17 | 284 | 1.52e-29 | 123 |
| MS.gene060811.t1 | MTR_6g059380 | 29.524 | 315 | 192 | 7 | 4 | 311 | 7 | 298 | 1.95e-25 | 110 |
| MS.gene060811.t1 | MTR_1g033880 | 27.707 | 314 | 174 | 10 | 7 | 302 | 8 | 286 | 1.38e-24 | 106 |
| MS.gene060811.t1 | MTR_4g115770 | 81.250 | 32 | 6 | 0 | 110 | 141 | 19 | 50 | 2.07e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060811.t1 | AT4G32285 | 54.588 | 643 | 235 | 10 | 5 | 601 | 4 | 635 | 0.0 | 653 |
| MS.gene060811.t1 | AT4G32285 | 54.588 | 643 | 235 | 10 | 5 | 601 | 4 | 635 | 0.0 | 653 |
| MS.gene060811.t1 | AT1G03050 | 42.810 | 605 | 290 | 10 | 1 | 569 | 1 | 585 | 5.32e-168 | 491 |
| MS.gene060811.t1 | AT4G02650 | 42.880 | 618 | 303 | 10 | 1 | 584 | 1 | 602 | 9.35e-159 | 468 |
| MS.gene060811.t1 | AT2G25430 | 58.645 | 428 | 162 | 6 | 177 | 601 | 238 | 653 | 3.27e-155 | 461 |
| MS.gene060811.t1 | AT2G25430 | 66.867 | 166 | 54 | 1 | 1 | 166 | 1 | 165 | 2.52e-70 | 239 |
| MS.gene060811.t1 | AT1G05020 | 43.333 | 330 | 170 | 6 | 3 | 316 | 2 | 330 | 1.72e-84 | 277 |
| MS.gene060811.t1 | AT1G14910 | 31.376 | 545 | 308 | 15 | 7 | 537 | 8 | 500 | 9.61e-75 | 252 |
| MS.gene060811.t1 | AT4G25940 | 30.282 | 568 | 317 | 16 | 4 | 536 | 5 | 528 | 1.98e-71 | 241 |
| MS.gene060811.t1 | AT1G14910 | 30.952 | 546 | 304 | 16 | 7 | 537 | 8 | 495 | 9.24e-71 | 241 |
| MS.gene060811.t1 | AT5G57200 | 30.631 | 555 | 326 | 15 | 4 | 536 | 5 | 522 | 3.03e-69 | 235 |
| MS.gene060811.t1 | AT2G01600 | 30.499 | 541 | 308 | 17 | 7 | 533 | 8 | 494 | 4.41e-68 | 231 |
| MS.gene060811.t1 | AT5G35200 | 26.744 | 602 | 363 | 16 | 6 | 600 | 11 | 541 | 1.82e-57 | 202 |
| MS.gene060811.t1 | AT5G35200 | 26.744 | 602 | 363 | 16 | 6 | 600 | 11 | 541 | 1.82e-57 | 202 |
| MS.gene060811.t1 | AT1G33340 | 30.868 | 311 | 189 | 4 | 6 | 309 | 9 | 300 | 3.02e-28 | 117 |
| MS.gene060811.t1 | AT1G25240 | 25.000 | 312 | 194 | 7 | 7 | 309 | 6 | 286 | 1.97e-20 | 94.0 |
| MS.gene060811.t1 | AT1G25240 | 25.000 | 312 | 194 | 7 | 7 | 309 | 5 | 285 | 2.00e-20 | 94.0 |
| MS.gene060811.t1 | AT1G68110 | 24.444 | 315 | 202 | 7 | 7 | 312 | 5 | 292 | 1.36e-19 | 91.7 |
| MS.gene060811.t1 | AT2G01920 | 24.359 | 312 | 182 | 9 | 7 | 312 | 9 | 272 | 6.09e-13 | 70.5 |
Find 158 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCTCGACCGCGTATT+AGG | 0.219216 | 8.1:+11431845 | MS.gene060811:CDS |
| CAGACACCGGCGGCTGAAAT+AGG | 0.226915 | 8.1:+11432526 | MS.gene060811:CDS |
| TGCCAATTCATCCATCATTT+TGG | 0.231002 | 8.1:-11432050 | None:intergenic |
| CTATGGTTGGTGTAAGGATA+TGG | 0.234685 | 8.1:+11432078 | MS.gene060811:CDS |
| TATGCTTGTTCATAGACTTT+TGG | 0.257309 | 8.1:+11431511 | MS.gene060811:CDS |
| GAAGGTTTGTGGGAAGAATT+TGG | 0.266460 | 8.1:+11432478 | MS.gene060811:CDS |
| TTGAAAAGTGTTGTTGAATC+TGG | 0.266467 | 8.1:+11431716 | MS.gene060811:CDS |
| GAATCTGGGGATGCTGAATT+TGG | 0.275355 | 8.1:+11431731 | MS.gene060811:CDS |
| GTCGAAACAGAAGGCTGATT+TGG | 0.279481 | 8.1:+11432594 | MS.gene060811:CDS |
| AGCACCTGACCTTGAAGTTT+TGG | 0.280993 | 8.1:+11431325 | MS.gene060811:CDS |
| CAACAATTATGGCAGCAATA+TGG | 0.293512 | 8.1:+11432895 | MS.gene060811:CDS |
| GATGAATTGGCAGGCTTCTA+TGG | 0.295295 | 8.1:+11432061 | MS.gene060811:CDS |
| AATGAAAGCTGAGAGGGTTT+TGG | 0.301505 | 8.1:+11431802 | MS.gene060811:CDS |
| ATGAGGCTCATTCTAGTTCT+TGG | 0.304967 | 8.1:+11431618 | MS.gene060811:CDS |
| CATCAGCAGGAACTTCTTCA+TGG | 0.317266 | 8.1:-11431364 | None:intergenic |
| TTGTTCAGGAACAACAATTA+TGG | 0.354466 | 8.1:+11432884 | MS.gene060811:CDS |
| AGTTATGGAATGCCACAATT+TGG | 0.360081 | 8.1:+11432982 | MS.gene060811:CDS |
| CTGAAACACCATCGTCTCTA+AGG | 0.362617 | 8.1:-11432393 | None:intergenic |
| TGAGAAGAGGTTGGAGGTTA+AGG | 0.363649 | 8.1:+11432207 | MS.gene060811:CDS |
| AACAATTATGGCAGCAATAT+GGG | 0.368947 | 8.1:+11432896 | MS.gene060811:CDS |
| GGTGTTGATGGATAGGTTTA+TGG | 0.371722 | 8.1:+11431976 | MS.gene060811:CDS |
| TGAACACGAGGAGTTTCTTT+AGG | 0.373021 | 8.1:-11432346 | None:intergenic |
| ACAAGTTCCACACTTCAAAA+AGG | 0.373914 | 8.1:-11433039 | None:intergenic |
| CTTTGACAACCAAAACTTCA+AGG | 0.377487 | 8.1:-11431334 | None:intergenic |
| TGCAATGTATCTTGATCAAA+AGG | 0.379781 | 8.1:+11431667 | MS.gene060811:CDS |
| CCACAAACCTTCTGTCTTGA+CGG | 0.384995 | 8.1:-11432467 | None:intergenic |
| GTTGAAATTTGTGATGTGTT+GGG | 0.387926 | 8.1:+11431953 | MS.gene060811:CDS |
| ACAGCTTGCATTGTTCCATC+TGG | 0.393155 | 8.1:-11432772 | None:intergenic |
| ATATGTGCAAATAGCAGAAA+TGG | 0.394136 | 8.1:+11432843 | MS.gene060811:CDS |
| GACGCCGATTCTTGCTTTGC+CGG | 0.395013 | 8.1:+11432747 | MS.gene060811:CDS |
| TCGAAACAGAAGGCTGATTT+GGG | 0.400505 | 8.1:+11432595 | MS.gene060811:CDS |
| TCATTGCTCCAATTGCTTTG+CGG | 0.405183 | 8.1:-11431259 | None:intergenic |
| ATTGCTTTGCGGATTGTTGA+TGG | 0.406642 | 8.1:-11431248 | None:intergenic |
| GAAGCAGCACTTGCTTGTTC+AGG | 0.406680 | 8.1:+11432870 | MS.gene060811:CDS |
| ACCTCATTGATATCTGCTTC+TGG | 0.407260 | 8.1:-11432253 | None:intergenic |
| AATCTTACATCTTATTCTAA+AGG | 0.407578 | 8.1:+11431410 | MS.gene060811:CDS |
| CTGAAATAGGGAAAGCAGAT+TGG | 0.410553 | 8.1:+11432539 | MS.gene060811:CDS |
| TCAGCTTTCATTTCCCTCAC+AGG | 0.417821 | 8.1:-11431791 | None:intergenic |
| TCAACAATCCGCAAAGCAAT+TGG | 0.418299 | 8.1:+11431251 | MS.gene060811:CDS |
| CTTGCTTTGCCGGCTCCAGA+TGG | 0.419646 | 8.1:+11432757 | MS.gene060811:CDS |
| GACACTTGAGGGTTTCTTGA+AGG | 0.419795 | 8.1:+11432159 | MS.gene060811:CDS |
| ATGGTGCTGCTAAGAATAAT+AGG | 0.420414 | 8.1:+11431879 | MS.gene060811:CDS |
| TTCCAAAATGATGGATGAAT+TGG | 0.426253 | 8.1:+11432048 | MS.gene060811:CDS |
| GTCGCACTCTTACCAATTCC+AGG | 0.429182 | 8.1:-11432727 | None:intergenic |
| AGACACCGGCGGCTGAAATA+GGG | 0.430463 | 8.1:+11432527 | MS.gene060811:CDS |
| TGTTGAAATTTGTGATGTGT+TGG | 0.434833 | 8.1:+11431952 | MS.gene060811:CDS |
| ATGCCACAATTTGGTGGGAT+TGG | 0.436110 | 8.1:+11432991 | MS.gene060811:CDS |
| CAGCTTTCATTTCCCTCACA+GGG | 0.437925 | 8.1:-11431790 | None:intergenic |
| TAAAACTATCCCTCACAATC+TGG | 0.438866 | 8.1:-11431922 | None:intergenic |
| GGCATTCCATAACTCATCAT+AGG | 0.441011 | 8.1:-11432973 | None:intergenic |
| TGAGGCTCATTCTAGTTCTT+GGG | 0.441565 | 8.1:+11431619 | MS.gene060811:CDS |
| GATGGATAGGTTTATGGAAA+TGG | 0.444981 | 8.1:+11431982 | MS.gene060811:CDS |
| TTGAAATTTGTGATGTGTTG+GGG | 0.446185 | 8.1:+11431954 | MS.gene060811:CDS |
| TTTGATTCACTTGTATTGAA+TGG | 0.446884 | 8.1:+11432625 | MS.gene060811:CDS |
| ACAGACAGTGATGCTGCAAA+TGG | 0.448668 | 8.1:-11432808 | None:intergenic |
| CTTACGTATTTGTCATCAGC+AGG | 0.451659 | 8.1:-11431377 | None:intergenic |
| TGTTAGTGCTTCCAAAATGA+TGG | 0.451763 | 8.1:+11432039 | MS.gene060811:CDS |
| TGAAAAGTGTTGTTGAATCT+GGG | 0.452173 | 8.1:+11431717 | MS.gene060811:CDS |
| ACAGGAGGTTGTTGCGGTCG+AGG | 0.455057 | 8.1:-11432313 | None:intergenic |
| AGTGTGGCATTACCTGGAAT+TGG | 0.461532 | 8.1:+11432715 | MS.gene060811:CDS |
| AAATTCTTCACCTCAGGCGC+TGG | 0.463279 | 8.1:-11432286 | None:intergenic |
| TCACAACCTATGATGAGTTA+TGG | 0.465190 | 8.1:+11432967 | MS.gene060811:CDS |
| TCTGCTATTTGCACATATGA+AGG | 0.468165 | 8.1:-11432838 | None:intergenic |
| TGGCAGCAATATGGGAGAGA+TGG | 0.469904 | 8.1:+11432904 | MS.gene060811:CDS |
| ACAATTTCATCCTCAAATGA+AGG | 0.470020 | 8.1:-11431545 | None:intergenic |
| CCGTCAAGACAGAAGGTTTG+TGG | 0.470020 | 8.1:+11432467 | MS.gene060811:CDS |
| TCTAGTTCTTGGGATCATGC+TGG | 0.471723 | 8.1:+11431629 | MS.gene060811:CDS |
| GCTAGTAGTGTGGCATTACC+TGG | 0.474130 | 8.1:+11432709 | MS.gene060811:CDS |
| CAAAGCAATTGGAGCAATGA+AGG | 0.474529 | 8.1:+11431262 | MS.gene060811:CDS |
| GGTGTTAAATTCTTCACCTC+AGG | 0.474870 | 8.1:-11432292 | None:intergenic |
| TGATGGCCACCCTTCATTTG+AGG | 0.483163 | 8.1:+11431535 | MS.gene060811:CDS |
| TTAACCTCCAACCTCTTCTC+AGG | 0.483672 | 8.1:-11432205 | None:intergenic |
| TCTTTAGGCTGCGGAGCCAC+AGG | 0.488305 | 8.1:-11432331 | None:intergenic |
| CAGAAGGCTGATTTGGGAGG+TGG | 0.489303 | 8.1:+11432601 | MS.gene060811:CDS |
| TGAAATAGGGAAAGCAGATT+GGG | 0.491972 | 8.1:+11432540 | MS.gene060811:CDS |
| TGCATTGTTCCATCTGGAGC+CGG | 0.496842 | 8.1:-11432766 | None:intergenic |
| ACAACCAAAACTTCAAGGTC+AGG | 0.498743 | 8.1:-11431329 | None:intergenic |
| CAAGTGGGTTTAACAAGGGT+TGG | 0.502262 | 8.1:+11432937 | MS.gene060811:CDS |
| GGTTTAACAAGGGTTGGAGC+TGG | 0.502377 | 8.1:+11432943 | MS.gene060811:CDS |
| TATGGTTGGTGTAAGGATAT+GGG | 0.503323 | 8.1:+11432079 | MS.gene060811:CDS |
| AGGCTTCTATGGTTGGTGTA+AGG | 0.509267 | 8.1:+11432072 | MS.gene060811:CDS |
| AATTGGCAGGCTTCTATGGT+TGG | 0.517810 | 8.1:+11432065 | MS.gene060811:CDS |
| GGCAGCAATATGGGAGAGAT+GGG | 0.520420 | 8.1:+11432905 | MS.gene060811:CDS |
| ACAAGGCAATAAATTTGCAT+TGG | 0.521522 | 8.1:+11432423 | MS.gene060811:CDS |
| CAGACAGTGATGCTGCAAAT+GGG | 0.527554 | 8.1:-11432807 | None:intergenic |
| GCTTTCCCTATTTCAGCCGC+CGG | 0.527983 | 8.1:-11432532 | None:intergenic |
| AGCAGATTGGGAATTAGCAT+TGG | 0.530343 | 8.1:+11432552 | MS.gene060811:CDS |
| CGAGGAGTTTCTTTAGGCTG+CGG | 0.535656 | 8.1:-11432340 | None:intergenic |
| ATGCCACTCGTAGTGGAATG+AGG | 0.536630 | 8.1:+11431570 | MS.gene060811:CDS |
| GGAGCCGGCAAAGCAAGAAT+CGG | 0.539183 | 8.1:-11432751 | None:intergenic |
| ATCAGCGTAGCAAAAGTTGC+TGG | 0.542029 | 8.1:+11431296 | MS.gene060811:CDS |
| AGATTGGGAATTAGCATTGG+TGG | 0.546066 | 8.1:+11432555 | MS.gene060811:CDS |
| AAGGTCAAGTGGGTTTAACA+AGG | 0.546870 | 8.1:+11432932 | MS.gene060811:CDS |
| GAAGGCTCTTCCAGCGCCTG+AGG | 0.551250 | 8.1:+11432276 | MS.gene060811:CDS |
| TATGGAATGCCACAATTTGG+TGG | 0.551750 | 8.1:+11432985 | MS.gene060811:CDS |
| AAAGAGTCCTGAGAAGAGGT+TGG | 0.551868 | 8.1:+11432198 | MS.gene060811:CDS |
| TAAGAATAATAGGTTAGTGT+TGG | 0.553267 | 8.1:+11431889 | MS.gene060811:CDS |
| ATGGAATGCCACAATTTGGT+GGG | 0.554732 | 8.1:+11432986 | MS.gene060811:CDS |
| GAACAAAGAGTCCTGAGAAG+AGG | 0.555312 | 8.1:+11432194 | MS.gene060811:CDS |
| CGTCAAGACAGAAGGTTTGT+GGG | 0.556434 | 8.1:+11432468 | MS.gene060811:CDS |
| AGCAGATATCAATGAGGTGA+AGG | 0.562071 | 8.1:+11432258 | MS.gene060811:CDS |
| AGATGGGATGCAAGGTCAAG+TGG | 0.567578 | 8.1:+11432921 | MS.gene060811:CDS |
| TGGTTCTGTGAAGAAGAATG+AGG | 0.569960 | 8.1:+11431751 | MS.gene060811:CDS |
| TTTGGTGGGATTGGACAACC+TGG | 0.572922 | 8.1:+11433000 | MS.gene060811:CDS |
| GCTTCGACCGTCAAGACAGA+AGG | 0.573026 | 8.1:+11432460 | MS.gene060811:CDS |
| ATTGTTCATGCCACTCGTAG+TGG | 0.574986 | 8.1:+11431563 | MS.gene060811:CDS |
| GGTGCATTGTAGTAGCCTCC+AGG | 0.576934 | 8.1:-11433018 | None:intergenic |
| TGCCACTCGTAGTGGAATGA+GGG | 0.578106 | 8.1:+11431571 | MS.gene060811:CDS |
| CCTCGTGTTCAACAAGAGAC+AGG | 0.580723 | 8.1:+11432358 | MS.gene060811:CDS |
| TGAAATTTGTGATGTGTTGG+GGG | 0.582206 | 8.1:+11431955 | MS.gene060811:CDS |
| TAGTAATCTGTCGAAACAGA+AGG | 0.582861 | 8.1:+11432585 | MS.gene060811:CDS |
| AAAATGATGGATGAATTGGC+AGG | 0.583427 | 8.1:+11432052 | MS.gene060811:CDS |
| TGCAAATAGCAGAAATGGAG+AGG | 0.586410 | 8.1:+11432848 | MS.gene060811:CDS |
| GACTTCAGCATGGCAGACAC+CGG | 0.586939 | 8.1:+11432513 | MS.gene060811:CDS |
| CTGCCATGCTGAAGTCACTT+CGG | 0.587835 | 8.1:-11432506 | None:intergenic |
| CAATTTCATCCTCAAATGAA+GGG | 0.588500 | 8.1:-11431544 | None:intergenic |
| TTGAATGGAATGTATGATCA+AGG | 0.590955 | 8.1:+11432640 | MS.gene060811:CDS |
| AAATGATGCTACCCCTGTGA+GGG | 0.591720 | 8.1:+11431778 | MS.gene060811:CDS |
| TGTCCAATCCCACCAAATTG+TGG | 0.594722 | 8.1:-11432994 | None:intergenic |
| TTGCGATTTACCAGATTGTG+AGG | 0.594904 | 8.1:+11431912 | MS.gene060811:CDS |
| GAGTCCTGAGAAGAGGTTGG+AGG | 0.595271 | 8.1:+11432201 | MS.gene060811:CDS |
| GTAAGGATATGGGTATTGCT+AGG | 0.595941 | 8.1:+11432089 | MS.gene060811:CDS |
| CCTGTCTCTTGTTGAACACG+AGG | 0.596634 | 8.1:-11432358 | None:intergenic |
| TTAGGCTGCGGAGCCACAGG+AGG | 0.598625 | 8.1:-11432328 | None:intergenic |
| AGCACTAACATAAAACTCAA+AGG | 0.600537 | 8.1:-11432026 | None:intergenic |
| TATGGGAGAGATGGGATGCA+AGG | 0.609305 | 8.1:+11432913 | MS.gene060811:CDS |
| GATGGAACAATGCAAGCTGT+AGG | 0.610741 | 8.1:+11432775 | MS.gene060811:CDS |
| TGCGATTTACCAGATTGTGA+GGG | 0.612559 | 8.1:+11431913 | MS.gene060811:CDS |
| GAGGGAAATGAAAGCTGAGA+GGG | 0.612777 | 8.1:+11431796 | MS.gene060811:CDS |
| ATTTGCACATATGAAGGTGG+CGG | 0.616726 | 8.1:-11432832 | None:intergenic |
| TCGACCGCAACAACCTCCTG+TGG | 0.619993 | 8.1:+11432315 | MS.gene060811:CDS |
| GGTGTTTCAGCTGATGAACA+AGG | 0.621449 | 8.1:+11432406 | MS.gene060811:CDS |
| AACCCTCATTCCACTACGAG+TGG | 0.623104 | 8.1:-11431573 | None:intergenic |
| GAAAAGTGTTGTTGAATCTG+GGG | 0.630815 | 8.1:+11431718 | MS.gene060811:CDS |
| GCTATTTGCACATATGAAGG+TGG | 0.631483 | 8.1:-11432835 | None:intergenic |
| TTCAGCATGGCAGACACCGG+CGG | 0.632626 | 8.1:+11432516 | MS.gene060811:CDS |
| TGGTGGGAGTGCTAGTAGTG+TGG | 0.638295 | 8.1:+11432699 | MS.gene060811:CDS |
| AGCACAACTGAGGTGAGTGG+TGG | 0.638502 | 8.1:+11432682 | MS.gene060811:CDS |
| GATGGGATGCAAGGTCAAGT+GGG | 0.639308 | 8.1:+11432922 | MS.gene060811:CDS |
| AAACAGAAGGCTGATTTGGG+AGG | 0.641181 | 8.1:+11432598 | MS.gene060811:CDS |
| AGGTCAAGTGGGTTTAACAA+GGG | 0.654548 | 8.1:+11432933 | MS.gene060811:CDS |
| GGAGCCACAGGAGGTTGTTG+CGG | 0.659960 | 8.1:-11432319 | None:intergenic |
| CTGCACTTCAGGGTACTCAG+AGG | 0.671672 | 8.1:-11432113 | None:intergenic |
| AATGCAAGCTGTAGGAACGC+AGG | 0.672904 | 8.1:+11432783 | MS.gene060811:CDS |
| GCACAACTGAGGTGAGTGGT+GGG | 0.673965 | 8.1:+11432683 | MS.gene060811:CDS |
| TTAGTGAACCTTAGAGACGA+TGG | 0.680919 | 8.1:+11432385 | MS.gene060811:CDS |
| AAAATGATGCTACCCCTGTG+AGG | 0.683408 | 8.1:+11431777 | MS.gene060811:CDS |
| TTTCATCCTCAAATGAAGGG+TGG | 0.684301 | 8.1:-11431541 | None:intergenic |
| AGCTTTCATTTCCCTCACAG+GGG | 0.685348 | 8.1:-11431789 | None:intergenic |
| CATCCGAAGTGACTTCAGCA+TGG | 0.685535 | 8.1:+11432503 | MS.gene060811:CDS |
| TGAGGGAAATGAAAGCTGAG+AGG | 0.694516 | 8.1:+11431795 | MS.gene060811:CDS |
| TTATTCTTAGCAGCACCATG+TGG | 0.695497 | 8.1:-11431875 | None:intergenic |
| GGTGGGATTGGACAACCTGG+AGG | 0.697071 | 8.1:+11433003 | MS.gene060811:CDS |
| GCCAGAAGCAGATATCAATG+AGG | 0.701216 | 8.1:+11432252 | MS.gene060811:CDS |
| GTATTAGGTTGTAAACCACA+TGG | 0.701935 | 8.1:+11431860 | MS.gene060811:CDS |
| GTGAGCACAACTGAGGTGAG+TGG | 0.742823 | 8.1:+11432679 | MS.gene060811:CDS |
| GTGGTTTACAACCTAATACG+CGG | 0.755539 | 8.1:-11431856 | None:intergenic |
| ACAACATGTGAGCACAACTG+AGG | 0.771312 | 8.1:+11432672 | MS.gene060811:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTTACATCTTATTCTAA+AGG | + | chr8.1:11431410-11431429 | MS.gene060811:CDS | 20.0% |
| ! | TAAGAATAATAGGTTAGTGT+TGG | + | chr8.1:11431889-11431908 | MS.gene060811:CDS | 25.0% |
| ! | TTTGATTCACTTGTATTGAA+TGG | + | chr8.1:11432625-11432644 | MS.gene060811:CDS | 25.0% |
| !! | TGATCAAAAGGTTGAATTTT+TGG | + | chr8.1:11431679-11431698 | MS.gene060811:CDS | 25.0% |
| AACAATTATGGCAGCAATAT+GGG | + | chr8.1:11432896-11432915 | MS.gene060811:CDS | 30.0% | |
| ACAAGGCAATAAATTTGCAT+TGG | + | chr8.1:11432423-11432442 | MS.gene060811:CDS | 30.0% | |
| ACAATTTCATCCTCAAATGA+AGG | - | chr8.1:11431548-11431567 | None:intergenic | 30.0% | |
| AGCACTAACATAAAACTCAA+AGG | - | chr8.1:11432029-11432048 | None:intergenic | 30.0% | |
| ATATGTGCAAATAGCAGAAA+TGG | + | chr8.1:11432843-11432862 | MS.gene060811:CDS | 30.0% | |
| CAATTTCATCCTCAAATGAA+GGG | - | chr8.1:11431547-11431566 | None:intergenic | 30.0% | |
| GATTAACAAAAACTCGTGAT+TGG | + | chr8.1:11431468-11431487 | MS.gene060811:CDS | 30.0% | |
| GTTGAAATTTGTGATGTGTT+GGG | + | chr8.1:11431953-11431972 | MS.gene060811:CDS | 30.0% | |
| TGCAATGTATCTTGATCAAA+AGG | + | chr8.1:11431667-11431686 | MS.gene060811:CDS | 30.0% | |
| TGTTGAAATTTGTGATGTGT+TGG | + | chr8.1:11431952-11431971 | MS.gene060811:CDS | 30.0% | |
| TTGAAATTTGTGATGTGTTG+GGG | + | chr8.1:11431954-11431973 | MS.gene060811:CDS | 30.0% | |
| TTGAATGGAATGTATGATCA+AGG | + | chr8.1:11432640-11432659 | MS.gene060811:CDS | 30.0% | |
| TTGTTCAGGAACAACAATTA+TGG | + | chr8.1:11432884-11432903 | MS.gene060811:CDS | 30.0% | |
| ! | AAAATCACTGACAGTCTTTT+AGG | + | chr8.1:11432136-11432155 | MS.gene060811:CDS | 30.0% |
| ! | AAATCACTGACAGTCTTTTA+GGG | + | chr8.1:11432137-11432156 | MS.gene060811:CDS | 30.0% |
| ! | TATGCTTGTTCATAGACTTT+TGG | + | chr8.1:11431511-11431530 | MS.gene060811:CDS | 30.0% |
| !! | TATGAGTGATTTTAGAGATG+AGG | + | chr8.1:11431601-11431620 | MS.gene060811:CDS | 30.0% |
| !! | TGAAAAGTGTTGTTGAATCT+GGG | + | chr8.1:11431717-11431736 | MS.gene060811:CDS | 30.0% |
| !! | TTCCAAAATGATGGATGAAT+TGG | + | chr8.1:11432048-11432067 | MS.gene060811:CDS | 30.0% |
| !! | TTGAAAAGTGTTGTTGAATC+TGG | + | chr8.1:11431716-11431735 | MS.gene060811:CDS | 30.0% |
| AGTTATGGAATGCCACAATT+TGG | + | chr8.1:11432982-11433001 | MS.gene060811:CDS | 35.0% | |
| CAACAATTATGGCAGCAATA+TGG | + | chr8.1:11432895-11432914 | MS.gene060811:CDS | 35.0% | |
| CTTTGACAACCAAAACTTCA+AGG | - | chr8.1:11431337-11431356 | None:intergenic | 35.0% | |
| GATGGATAGGTTTATGGAAA+TGG | + | chr8.1:11431982-11432001 | MS.gene060811:CDS | 35.0% | |
| TAAAACTATCCCTCACAATC+TGG | - | chr8.1:11431925-11431944 | None:intergenic | 35.0% | |
| TAGTAATCTGTCGAAACAGA+AGG | + | chr8.1:11432585-11432604 | MS.gene060811:CDS | 35.0% | |
| TCACAACCTATGATGAGTTA+TGG | + | chr8.1:11432967-11432986 | MS.gene060811:CDS | 35.0% | |
| TGAAATAGGGAAAGCAGATT+GGG | + | chr8.1:11432540-11432559 | MS.gene060811:CDS | 35.0% | |
| TGAAATTTGTGATGTGTTGG+GGG | + | chr8.1:11431955-11431974 | MS.gene060811:CDS | 35.0% | |
| TGTTAGTGCTTCCAAAATGA+TGG | + | chr8.1:11432039-11432058 | MS.gene060811:CDS | 35.0% | |
| ! | GTATTAGGTTGTAAACCACA+TGG | + | chr8.1:11431860-11431879 | MS.gene060811:CDS | 35.0% |
| ! | TATGGTTGGTGTAAGGATAT+GGG | + | chr8.1:11432079-11432098 | MS.gene060811:CDS | 35.0% |
| ! | TCTGCTATTTGCACATATGA+AGG | - | chr8.1:11432841-11432860 | None:intergenic | 35.0% |
| ! | TGCCAATTCATCCATCATTT+TGG | - | chr8.1:11432053-11432072 | None:intergenic | 35.0% |
| !! | AAAATGATGGATGAATTGGC+AGG | + | chr8.1:11432052-11432071 | MS.gene060811:CDS | 35.0% |
| !! | ATGGTGCTGCTAAGAATAAT+AGG | + | chr8.1:11431879-11431898 | MS.gene060811:CDS | 35.0% |
| !! | GAAAAGTGTTGTTGAATCTG+GGG | + | chr8.1:11431718-11431737 | MS.gene060811:CDS | 35.0% |
| !! | GTTCATAGACTTTTGGTTGA+TGG | + | chr8.1:11431518-11431537 | MS.gene060811:CDS | 35.0% |
| !! | TTTGCATTGGCATTGTTTTC+TGG | + | chr8.1:11432436-11432455 | MS.gene060811:CDS | 35.0% |
| ACAACCAAAACTTCAAGGTC+AGG | - | chr8.1:11431332-11431351 | None:intergenic | 40.0% | |
| ACCTCATTGATATCTGCTTC+TGG | - | chr8.1:11432256-11432275 | None:intergenic | 40.0% | |
| AGCAGATATCAATGAGGTGA+AGG | + | chr8.1:11432258-11432277 | MS.gene060811:CDS | 40.0% | |
| AGCAGATTGGGAATTAGCAT+TGG | + | chr8.1:11432552-11432571 | MS.gene060811:CDS | 40.0% | |
| ATGGAATGCCACAATTTGGT+GGG | + | chr8.1:11432986-11433005 | MS.gene060811:CDS | 40.0% | |
| ATTTGCACATATGAAGGTGG+CGG | - | chr8.1:11432835-11432854 | None:intergenic | 40.0% | |
| CAAAGCAATTGGAGCAATGA+AGG | + | chr8.1:11431262-11431281 | MS.gene060811:CDS | 40.0% | |
| CTGAAATAGGGAAAGCAGAT+TGG | + | chr8.1:11432539-11432558 | MS.gene060811:CDS | 40.0% | |
| CTTACGTATTTGTCATCAGC+AGG | - | chr8.1:11431380-11431399 | None:intergenic | 40.0% | |
| GAAGGTTTGTGGGAAGAATT+TGG | + | chr8.1:11432478-11432497 | MS.gene060811:CDS | 40.0% | |
| GCTATTTGCACATATGAAGG+TGG | - | chr8.1:11432838-11432857 | None:intergenic | 40.0% | |
| GGCATTCCATAACTCATCAT+AGG | - | chr8.1:11432976-11432995 | None:intergenic | 40.0% | |
| GGTGTTAAATTCTTCACCTC+AGG | - | chr8.1:11432295-11432314 | None:intergenic | 40.0% | |
| GTGGTTTACAACCTAATACG+CGG | - | chr8.1:11431859-11431878 | None:intergenic | 40.0% | |
| TATGGAATGCCACAATTTGG+TGG | + | chr8.1:11432985-11433004 | MS.gene060811:CDS | 40.0% | |
| TCAACAATCCGCAAAGCAAT+TGG | + | chr8.1:11431251-11431270 | MS.gene060811:CDS | 40.0% | |
| TCATTGCTCCAATTGCTTTG+CGG | - | chr8.1:11431262-11431281 | None:intergenic | 40.0% | |
| TGAACACGAGGAGTTTCTTT+AGG | - | chr8.1:11432349-11432368 | None:intergenic | 40.0% | |
| TGCAAATAGCAGAAATGGAG+AGG | + | chr8.1:11432848-11432867 | MS.gene060811:CDS | 40.0% | |
| TGCGATTTACCAGATTGTGA+GGG | + | chr8.1:11431913-11431932 | MS.gene060811:CDS | 40.0% | |
| TTAGTGAACCTTAGAGACGA+TGG | + | chr8.1:11432385-11432404 | MS.gene060811:CDS | 40.0% | |
| TTATTCTTAGCAGCACCATG+TGG | - | chr8.1:11431878-11431897 | None:intergenic | 40.0% | |
| TTGCGATTTACCAGATTGTG+AGG | + | chr8.1:11431912-11431931 | MS.gene060811:CDS | 40.0% | |
| TTTCATCCTCAAATGAAGGG+TGG | - | chr8.1:11431544-11431563 | None:intergenic | 40.0% | |
| ! | AAGGTCAAGTGGGTTTAACA+AGG | + | chr8.1:11432932-11432951 | MS.gene060811:CDS | 40.0% |
| ! | AATGAAAGCTGAGAGGGTTT+TGG | + | chr8.1:11431802-11431821 | MS.gene060811:CDS | 40.0% |
| ! | AGATTGGGAATTAGCATTGG+TGG | + | chr8.1:11432555-11432574 | MS.gene060811:CDS | 40.0% |
| ! | AGGTCAAGTGGGTTTAACAA+GGG | + | chr8.1:11432933-11432952 | MS.gene060811:CDS | 40.0% |
| ! | ATTGCTTTGCGGATTGTTGA+TGG | - | chr8.1:11431251-11431270 | None:intergenic | 40.0% |
| ! | CAGTGATTTTCTGCACTTCA+GGG | - | chr8.1:11432126-11432145 | None:intergenic | 40.0% |
| ! | CTATGGTTGGTGTAAGGATA+TGG | + | chr8.1:11432078-11432097 | MS.gene060811:CDS | 40.0% |
| ! | GTAAGGATATGGGTATTGCT+AGG | + | chr8.1:11432089-11432108 | MS.gene060811:CDS | 40.0% |
| ! | TCAGTGATTTTCTGCACTTC+AGG | - | chr8.1:11432127-11432146 | None:intergenic | 40.0% |
| ! | TCGAAACAGAAGGCTGATTT+GGG | + | chr8.1:11432595-11432614 | MS.gene060811:CDS | 40.0% |
| ! | TGGTTCTGTGAAGAAGAATG+AGG | + | chr8.1:11431751-11431770 | MS.gene060811:CDS | 40.0% |
| !! | AGTCTTTTAGGGACACTTGA+GGG | + | chr8.1:11432148-11432167 | MS.gene060811:CDS | 40.0% |
| !! | ATGAGGCTCATTCTAGTTCT+TGG | + | chr8.1:11431618-11431637 | MS.gene060811:CDS | 40.0% |
| !! | GGTGTTGATGGATAGGTTTA+TGG | + | chr8.1:11431976-11431995 | MS.gene060811:CDS | 40.0% |
| !! | TGAGGCTCATTCTAGTTCTT+GGG | + | chr8.1:11431619-11431638 | MS.gene060811:CDS | 40.0% |
| !!! | GGATCATGCTGGTTTTGTTA+GGG | + | chr8.1:11431640-11431659 | MS.gene060811:CDS | 40.0% |
| AAAATGATGCTACCCCTGTG+AGG | + | chr8.1:11431777-11431796 | MS.gene060811:CDS | 45.0% | |
| AAAGAGTCCTGAGAAGAGGT+TGG | + | chr8.1:11432198-11432217 | MS.gene060811:CDS | 45.0% | |
| AAATGATGCTACCCCTGTGA+GGG | + | chr8.1:11431778-11431797 | MS.gene060811:CDS | 45.0% | |
| AATTGGCAGGCTTCTATGGT+TGG | + | chr8.1:11432065-11432084 | MS.gene060811:CDS | 45.0% | |
| ACAACATGTGAGCACAACTG+AGG | + | chr8.1:11432672-11432691 | MS.gene060811:CDS | 45.0% | |
| ACAGACAGTGATGCTGCAAA+TGG | - | chr8.1:11432811-11432830 | None:intergenic | 45.0% | |
| ACAGCTTGCATTGTTCCATC+TGG | - | chr8.1:11432775-11432794 | None:intergenic | 45.0% | |
| AGCTTTCATTTCCCTCACAG+GGG | - | chr8.1:11431792-11431811 | None:intergenic | 45.0% | |
| AGTGTGGCATTACCTGGAAT+TGG | + | chr8.1:11432715-11432734 | MS.gene060811:CDS | 45.0% | |
| ATCAGCGTAGCAAAAGTTGC+TGG | + | chr8.1:11431296-11431315 | MS.gene060811:CDS | 45.0% | |
| ATTGTTCATGCCACTCGTAG+TGG | + | chr8.1:11431563-11431582 | MS.gene060811:CDS | 45.0% | |
| CAAATTCTCGACCGCGTATT+AGG | + | chr8.1:11431845-11431864 | MS.gene060811:CDS | 45.0% | |
| CAGACAGTGATGCTGCAAAT+GGG | - | chr8.1:11432810-11432829 | None:intergenic | 45.0% | |
| CAGCTTTCATTTCCCTCACA+GGG | - | chr8.1:11431793-11431812 | None:intergenic | 45.0% | |
| CATCAGCAGGAACTTCTTCA+TGG | - | chr8.1:11431367-11431386 | None:intergenic | 45.0% | |
| CCACAAACCTTCTGTCTTGA+CGG | - | chr8.1:11432470-11432489 | None:intergenic | 45.0% | |
| CGTCAAGACAGAAGGTTTGT+GGG | + | chr8.1:11432468-11432487 | MS.gene060811:CDS | 45.0% | |
| CTGAAACACCATCGTCTCTA+AGG | - | chr8.1:11432396-11432415 | None:intergenic | 45.0% | |
| GAACAAAGAGTCCTGAGAAG+AGG | + | chr8.1:11432194-11432213 | MS.gene060811:CDS | 45.0% | |
| GAATCTGGGGATGCTGAATT+TGG | + | chr8.1:11431731-11431750 | MS.gene060811:CDS | 45.0% | |
| GACACTTGAGGGTTTCTTGA+AGG | + | chr8.1:11432159-11432178 | MS.gene060811:CDS | 45.0% | |
| GAGGGAAATGAAAGCTGAGA+GGG | + | chr8.1:11431796-11431815 | MS.gene060811:CDS | 45.0% | |
| GATGAATTGGCAGGCTTCTA+TGG | + | chr8.1:11432061-11432080 | MS.gene060811:CDS | 45.0% | |
| GATGGAACAATGCAAGCTGT+AGG | + | chr8.1:11432775-11432794 | MS.gene060811:CDS | 45.0% | |
| GCCAGAAGCAGATATCAATG+AGG | + | chr8.1:11432252-11432271 | MS.gene060811:CDS | 45.0% | |
| GGTGTTTCAGCTGATGAACA+AGG | + | chr8.1:11432406-11432425 | MS.gene060811:CDS | 45.0% | |
| GTCGAAACAGAAGGCTGATT+TGG | + | chr8.1:11432594-11432613 | MS.gene060811:CDS | 45.0% | |
| TCAGCTTTCATTTCCCTCAC+AGG | - | chr8.1:11431794-11431813 | None:intergenic | 45.0% | |
| TGAGAAGAGGTTGGAGGTTA+AGG | + | chr8.1:11432207-11432226 | MS.gene060811:CDS | 45.0% | |
| TGAGGGAAATGAAAGCTGAG+AGG | + | chr8.1:11431795-11431814 | MS.gene060811:CDS | 45.0% | |
| TGTCCAATCCCACCAAATTG+TGG | - | chr8.1:11432997-11433016 | None:intergenic | 45.0% | |
| TTAACCTCCAACCTCTTCTC+AGG | - | chr8.1:11432208-11432227 | None:intergenic | 45.0% | |
| ! | AGCACCTGACCTTGAAGTTT+TGG | + | chr8.1:11431325-11431344 | MS.gene060811:CDS | 45.0% |
| ! | AGGCTTCTATGGTTGGTGTA+AGG | + | chr8.1:11432072-11432091 | MS.gene060811:CDS | 45.0% |
| ! | ATGCCACAATTTGGTGGGAT+TGG | + | chr8.1:11432991-11433010 | MS.gene060811:CDS | 45.0% |
| ! | CAAGTGGGTTTAACAAGGGT+TGG | + | chr8.1:11432937-11432956 | MS.gene060811:CDS | 45.0% |
| !! | AAACAGAAGGCTGATTTGGG+AGG | + | chr8.1:11432598-11432617 | MS.gene060811:CDS | 45.0% |
| !! | CAGTCTTTTAGGGACACTTG+AGG | + | chr8.1:11432147-11432166 | MS.gene060811:CDS | 45.0% |
| !! | TCTAGTTCTTGGGATCATGC+TGG | + | chr8.1:11431629-11431648 | MS.gene060811:CDS | 45.0% |
| !!! | AAGCTGAGAGGGTTTTGGAT+AGG | + | chr8.1:11431807-11431826 | MS.gene060811:CDS | 45.0% |
| !!! | GGGATCATGCTGGTTTTGTT+AGG | + | chr8.1:11431639-11431658 | MS.gene060811:CDS | 45.0% |
| AAATTCTTCACCTCAGGCGC+TGG | - | chr8.1:11432289-11432308 | None:intergenic | 50.0% | |
| AACCCTCATTCCACTACGAG+TGG | - | chr8.1:11431576-11431595 | None:intergenic | 50.0% | |
| AATGCAAGCTGTAGGAACGC+AGG | + | chr8.1:11432783-11432802 | MS.gene060811:CDS | 50.0% | |
| AGATGGGATGCAAGGTCAAG+TGG | + | chr8.1:11432921-11432940 | MS.gene060811:CDS | 50.0% | |
| CATCCGAAGTGACTTCAGCA+TGG | + | chr8.1:11432503-11432522 | MS.gene060811:CDS | 50.0% | |
| CCGTCAAGACAGAAGGTTTG+TGG | + | chr8.1:11432467-11432486 | MS.gene060811:CDS | 50.0% | |
| CCTCGTGTTCAACAAGAGAC+AGG | + | chr8.1:11432358-11432377 | MS.gene060811:CDS | 50.0% | |
| CCTGTCTCTTGTTGAACACG+AGG | - | chr8.1:11432361-11432380 | None:intergenic | 50.0% | |
| CGAGGAGTTTCTTTAGGCTG+CGG | - | chr8.1:11432343-11432362 | None:intergenic | 50.0% | |
| CTGCCATGCTGAAGTCACTT+CGG | - | chr8.1:11432509-11432528 | None:intergenic | 50.0% | |
| GAAGCAGCACTTGCTTGTTC+AGG | + | chr8.1:11432870-11432889 | MS.gene060811:CDS | 50.0% | |
| GATGGGATGCAAGGTCAAGT+GGG | + | chr8.1:11432922-11432941 | MS.gene060811:CDS | 50.0% | |
| GCTAGTAGTGTGGCATTACC+TGG | + | chr8.1:11432709-11432728 | MS.gene060811:CDS | 50.0% | |
| GGCAGCAATATGGGAGAGAT+GGG | + | chr8.1:11432905-11432924 | MS.gene060811:CDS | 50.0% | |
| GGTTTAACAAGGGTTGGAGC+TGG | + | chr8.1:11432943-11432962 | MS.gene060811:CDS | 50.0% | |
| GTCGCACTCTTACCAATTCC+AGG | - | chr8.1:11432730-11432749 | None:intergenic | 50.0% | |
| TATGGGAGAGATGGGATGCA+AGG | + | chr8.1:11432913-11432932 | MS.gene060811:CDS | 50.0% | |
| TGATGGCCACCCTTCATTTG+AGG | + | chr8.1:11431535-11431554 | MS.gene060811:CDS | 50.0% | |
| TGGCAGCAATATGGGAGAGA+TGG | + | chr8.1:11432904-11432923 | MS.gene060811:CDS | 50.0% | |
| TTTGGTGGGATTGGACAACC+TGG | + | chr8.1:11433000-11433019 | MS.gene060811:CDS | 50.0% | |
| ! | ATGCCACTCGTAGTGGAATG+AGG | + | chr8.1:11431570-11431589 | MS.gene060811:CDS | 50.0% |
| ! | TGCATTGTTCCATCTGGAGC+CGG | - | chr8.1:11432769-11432788 | None:intergenic | 50.0% |
| ! | TGCCACTCGTAGTGGAATGA+GGG | + | chr8.1:11431571-11431590 | MS.gene060811:CDS | 50.0% |
| !! | TGATGTGTTGGGGGTGTTGA+TGG | + | chr8.1:11431964-11431983 | MS.gene060811:CDS | 50.0% |
| !! | TGTTGGGGGTGTTGATGGAT+AGG | + | chr8.1:11431969-11431988 | MS.gene060811:CDS | 50.0% |
| AGACACCGGCGGCTGAAATA+GGG | + | chr8.1:11432527-11432546 | MS.gene060811:CDS | 55.0% | |
| AGCACAACTGAGGTGAGTGG+TGG | + | chr8.1:11432682-11432701 | MS.gene060811:CDS | 55.0% | |
| GACTTCAGCATGGCAGACAC+CGG | + | chr8.1:11432513-11432532 | MS.gene060811:CDS | 55.0% | |
| GAGTCCTGAGAAGAGGTTGG+AGG | + | chr8.1:11432201-11432220 | MS.gene060811:CDS | 55.0% | |
| GCACAACTGAGGTGAGTGGT+GGG | + | chr8.1:11432683-11432702 | MS.gene060811:CDS | 55.0% | |
| GCTTCGACCGTCAAGACAGA+AGG | + | chr8.1:11432460-11432479 | MS.gene060811:CDS | 55.0% | |
| GCTTTCCCTATTTCAGCCGC+CGG | - | chr8.1:11432535-11432554 | None:intergenic | 55.0% | |
| GGAGCCGGCAAAGCAAGAAT+CGG | - | chr8.1:11432754-11432773 | None:intergenic | 55.0% | |
| GGTGCATTGTAGTAGCCTCC+AGG | - | chr8.1:11433021-11433040 | None:intergenic | 55.0% | |
| GTGAGCACAACTGAGGTGAG+TGG | + | chr8.1:11432679-11432698 | MS.gene060811:CDS | 55.0% | |
| ! | CTGCACTTCAGGGTACTCAG+AGG | - | chr8.1:11432116-11432135 | None:intergenic | 55.0% |
| !! | CAGAAGGCTGATTTGGGAGG+TGG | + | chr8.1:11432601-11432620 | MS.gene060811:CDS | 55.0% |
| !! | GACGCCGATTCTTGCTTTGC+CGG | + | chr8.1:11432747-11432766 | MS.gene060811:CDS | 55.0% |
| !! | TGGTGGGAGTGCTAGTAGTG+TGG | + | chr8.1:11432699-11432718 | MS.gene060811:CDS | 55.0% |
| ACAGGAGGTTGTTGCGGTCG+AGG | - | chr8.1:11432316-11432335 | None:intergenic | 60.0% | |
| CAGACACCGGCGGCTGAAAT+AGG | + | chr8.1:11432526-11432545 | MS.gene060811:CDS | 60.0% | |
| GGAGCCACAGGAGGTTGTTG+CGG | - | chr8.1:11432322-11432341 | None:intergenic | 60.0% | |
| GGTGGGATTGGACAACCTGG+AGG | + | chr8.1:11433003-11433022 | MS.gene060811:CDS | 60.0% | |
| TCGACCGCAACAACCTCCTG+TGG | + | chr8.1:11432315-11432334 | MS.gene060811:CDS | 60.0% | |
| TCTTTAGGCTGCGGAGCCAC+AGG | - | chr8.1:11432334-11432353 | None:intergenic | 60.0% | |
| TTCAGCATGGCAGACACCGG+CGG | + | chr8.1:11432516-11432535 | MS.gene060811:CDS | 60.0% | |
| !! | CTTGCTTTGCCGGCTCCAGA+TGG | + | chr8.1:11432757-11432776 | MS.gene060811:CDS | 60.0% |
| GAAGGCTCTTCCAGCGCCTG+AGG | + | chr8.1:11432276-11432295 | MS.gene060811:CDS | 65.0% | |
| TTAGGCTGCGGAGCCACAGG+AGG | - | chr8.1:11432331-11432350 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 11431242 | 11433047 | 11431242 | ID=MS.gene060811 |
| chr8.1 | mRNA | 11431242 | 11433047 | 11431242 | ID=MS.gene060811.t1;Parent=MS.gene060811 |
| chr8.1 | exon | 11431242 | 11433047 | 11431242 | ID=MS.gene060811.t1.exon1;Parent=MS.gene060811.t1 |
| chr8.1 | CDS | 11431242 | 11433047 | 11431242 | ID=cds.MS.gene060811.t1;Parent=MS.gene060811.t1 |
| Gene Sequence |
| Protein sequence |
