Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60148.t1 | XP_003609375.2 | 93.2 | 604 | 38 | 1 | 1 | 604 | 1 | 601 | 0.00E+00 | 1091.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60148.t1 | Q8S9J8 | 56.0 | 643 | 229 | 10 | 5 | 604 | 4 | 635 | 2.1e-183 | 643.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60148.t1 | G7JE64 | 93.2 | 604 | 38 | 1 | 1 | 604 | 1 | 601 | 0.0e+00 | 1091.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052016 | MS.gene60148 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene052296 | MS.gene60148 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene054617 | MS.gene60148 | 0.802089 | 6.62E-49 | -1.69E-46 |
| MS.gene060811 | MS.gene60148 | 0.9791 | 3.11E-147 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60148.t1 | MTR_4g114960 | 95.695 | 604 | 23 | 1 | 1 | 604 | 1 | 601 | 0.0 | 1196 |
| MS.gene60148.t1 | MTR_3g106900 | 56.462 | 650 | 228 | 8 | 1 | 604 | 1 | 641 | 0.0 | 704 |
| MS.gene60148.t1 | MTR_2g008170 | 40.600 | 633 | 317 | 10 | 1 | 601 | 1 | 606 | 2.09e-151 | 449 |
| MS.gene60148.t1 | MTR_8g008860 | 41.385 | 621 | 311 | 13 | 1 | 601 | 1 | 588 | 4.65e-151 | 448 |
| MS.gene60148.t1 | MTR_3g080490 | 43.030 | 330 | 171 | 4 | 3 | 329 | 2 | 317 | 4.55e-90 | 298 |
| MS.gene60148.t1 | MTR_4g115420 | 27.758 | 562 | 305 | 14 | 4 | 544 | 7 | 488 | 7.84e-64 | 219 |
| MS.gene60148.t1 | MTR_2g037980 | 34.242 | 330 | 201 | 6 | 4 | 330 | 5 | 321 | 1.96e-60 | 211 |
| MS.gene60148.t1 | MTR_4g127440 | 34.579 | 321 | 190 | 7 | 5 | 319 | 6 | 312 | 7.82e-56 | 199 |
| MS.gene60148.t1 | MTR_8g106040 | 31.790 | 324 | 203 | 4 | 6 | 324 | 5 | 315 | 1.31e-42 | 159 |
| MS.gene60148.t1 | MTR_0530s0020 | 25.347 | 288 | 193 | 4 | 32 | 317 | 17 | 284 | 6.61e-29 | 121 |
| MS.gene60148.t1 | MTR_6g059380 | 28.076 | 317 | 197 | 5 | 4 | 314 | 7 | 298 | 6.29e-24 | 106 |
| MS.gene60148.t1 | MTR_1g033880 | 26.814 | 317 | 176 | 10 | 7 | 305 | 8 | 286 | 1.56e-23 | 103 |
| MS.gene60148.t1 | MTR_4g115770 | 81.250 | 32 | 6 | 0 | 110 | 141 | 19 | 50 | 2.08e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60148.t1 | AT4G32285 | 54.224 | 651 | 228 | 9 | 5 | 604 | 4 | 635 | 0.0 | 654 |
| MS.gene60148.t1 | AT4G32285 | 54.224 | 651 | 228 | 9 | 5 | 604 | 4 | 635 | 0.0 | 654 |
| MS.gene60148.t1 | AT2G25430 | 53.604 | 666 | 234 | 12 | 1 | 604 | 1 | 653 | 0.0 | 634 |
| MS.gene60148.t1 | AT1G03050 | 42.810 | 612 | 283 | 12 | 1 | 572 | 1 | 585 | 2.47e-167 | 490 |
| MS.gene60148.t1 | AT4G02650 | 43.042 | 618 | 305 | 10 | 1 | 587 | 1 | 602 | 7.31e-159 | 469 |
| MS.gene60148.t1 | AT1G05020 | 43.030 | 330 | 174 | 4 | 3 | 319 | 2 | 330 | 3.79e-86 | 281 |
| MS.gene60148.t1 | AT1G14910 | 31.148 | 549 | 307 | 15 | 7 | 540 | 8 | 500 | 2.17e-74 | 251 |
| MS.gene60148.t1 | AT4G25940 | 30.473 | 571 | 315 | 17 | 4 | 539 | 5 | 528 | 4.25e-71 | 240 |
| MS.gene60148.t1 | AT1G14910 | 30.783 | 549 | 304 | 16 | 7 | 540 | 8 | 495 | 2.47e-70 | 240 |
| MS.gene60148.t1 | AT5G57200 | 30.466 | 558 | 326 | 15 | 4 | 539 | 5 | 522 | 6.90e-69 | 234 |
| MS.gene60148.t1 | AT2G01600 | 30.331 | 544 | 308 | 17 | 7 | 536 | 8 | 494 | 7.91e-68 | 231 |
| MS.gene60148.t1 | AT5G35200 | 26.281 | 605 | 365 | 15 | 6 | 603 | 11 | 541 | 5.99e-57 | 201 |
| MS.gene60148.t1 | AT5G35200 | 26.281 | 605 | 365 | 15 | 6 | 603 | 11 | 541 | 5.99e-57 | 201 |
| MS.gene60148.t1 | AT1G33340 | 31.111 | 315 | 186 | 6 | 6 | 312 | 9 | 300 | 3.89e-27 | 114 |
| MS.gene60148.t1 | AT1G25240 | 24.679 | 312 | 198 | 6 | 7 | 312 | 5 | 285 | 5.12e-20 | 92.8 |
| MS.gene60148.t1 | AT1G25240 | 24.679 | 312 | 198 | 7 | 7 | 312 | 6 | 286 | 5.17e-20 | 92.8 |
| MS.gene60148.t1 | AT1G68110 | 24.214 | 318 | 202 | 7 | 7 | 315 | 5 | 292 | 5.15e-19 | 89.7 |
| MS.gene60148.t1 | AT2G01920 | 24.444 | 315 | 181 | 9 | 7 | 315 | 9 | 272 | 6.92e-13 | 70.5 |
Find 160 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCTCGACCGCGTATT+AGG | 0.219216 | 8.3:+12410241 | MS.gene60148:CDS |
| CAGACACCGGCGGCTGAAAT+AGG | 0.226915 | 8.3:+12410922 | MS.gene60148:CDS |
| TGCCAATTCATCCATCATTT+TGG | 0.231002 | 8.3:-12410446 | None:intergenic |
| CTATGGTTGGTGTAAGGATA+TGG | 0.234685 | 8.3:+12410474 | MS.gene60148:CDS |
| TATGCTTGTTCATAGACTTT+TGG | 0.257309 | 8.3:+12409898 | MS.gene60148:CDS |
| GAAGGTTTGTGGGAAGAATT+TGG | 0.266460 | 8.3:+12410874 | MS.gene60148:CDS |
| GAATCTGGGGATGCTGAATT+TGG | 0.275355 | 8.3:+12410127 | MS.gene60148:CDS |
| GTCGAAACAGAAGGCTGATT+TGG | 0.279481 | 8.3:+12410990 | MS.gene60148:CDS |
| AGCACCTGACCTTGAAGTTT+TGG | 0.280993 | 8.3:+12409712 | MS.gene60148:CDS |
| CAACAATTATGGCAGCAATA+TGG | 0.293512 | 8.3:+12411291 | MS.gene60148:CDS |
| GATGAATTGGCAGGCTTCTA+TGG | 0.295295 | 8.3:+12410457 | MS.gene60148:CDS |
| AATGAAAGCTGAGAGGGTTT+TGG | 0.301505 | 8.3:+12410198 | MS.gene60148:CDS |
| ATGAGGCTCATTCTAGTTCT+TGG | 0.304967 | 8.3:+12410005 | MS.gene60148:CDS |
| CATCAGCAGGAACTTCTTCA+TGG | 0.317266 | 8.3:-12409751 | None:intergenic |
| GTTGGGAATGTTGTTGAATC+TGG | 0.331342 | 8.3:+12410112 | MS.gene60148:CDS |
| TTGTTCAGGAACAACAATTA+TGG | 0.354466 | 8.3:+12411280 | MS.gene60148:CDS |
| AGTTATGGAATGCCACAATT+TGG | 0.360081 | 8.3:+12411378 | MS.gene60148:CDS |
| CTGAAACACCATCGTCTCTA+AGG | 0.362617 | 8.3:-12410789 | None:intergenic |
| TGAGAAGAGGTTGGAGGTTA+AGG | 0.363649 | 8.3:+12410603 | MS.gene60148:CDS |
| AACAATTATGGCAGCAATAT+GGG | 0.368947 | 8.3:+12411292 | MS.gene60148:CDS |
| GGTGTTGATGGATAGGTTTA+TGG | 0.371722 | 8.3:+12410372 | MS.gene60148:CDS |
| TGAACACGAGGAGTTTCTTT+AGG | 0.373021 | 8.3:-12410742 | None:intergenic |
| ACAAGTTCCACACTTCAAAA+AGG | 0.373914 | 8.3:-12411435 | None:intergenic |
| CTTTGACAACCAAAACTTCA+AGG | 0.377487 | 8.3:-12409721 | None:intergenic |
| TGCAATGTATCTTGATCAAA+AGG | 0.379781 | 8.3:+12410054 | MS.gene60148:CDS |
| CCACAAACCTTCTGTCTTGA+CGG | 0.384995 | 8.3:-12410863 | None:intergenic |
| GTTGAAATTTGTGATGTGTT+GGG | 0.387926 | 8.3:+12410349 | MS.gene60148:CDS |
| ACAGCTTGCATTGTTCCATC+TGG | 0.393155 | 8.3:-12411168 | None:intergenic |
| ATATGTGCAAATAGCAGAAA+TGG | 0.394136 | 8.3:+12411239 | MS.gene60148:CDS |
| GACGCCGATTCTTGCTTTGC+CGG | 0.395013 | 8.3:+12411143 | MS.gene60148:CDS |
| TCGAAACAGAAGGCTGATTT+GGG | 0.400505 | 8.3:+12410991 | MS.gene60148:CDS |
| TCATTGCTCCAATTGCTTTG+CGG | 0.405183 | 8.3:-12409646 | None:intergenic |
| ATTGCTTTGCGGATTGTTGA+TGG | 0.406642 | 8.3:-12409635 | None:intergenic |
| GAAGCAGCACTTGCTTGTTC+AGG | 0.406680 | 8.3:+12411266 | MS.gene60148:CDS |
| ACCTCATTGATATCTGCTTC+TGG | 0.407260 | 8.3:-12410649 | None:intergenic |
| AATCTTACATCTTATTCTAA+AGG | 0.407578 | 8.3:+12409797 | MS.gene60148:CDS |
| CTGAAATAGGGAAAGCAGAT+TGG | 0.410553 | 8.3:+12410935 | MS.gene60148:CDS |
| TCAGCTTTCATTTCCCTCAC+AGG | 0.417821 | 8.3:-12410187 | None:intergenic |
| TCAACAATCCGCAAAGCAAT+TGG | 0.418299 | 8.3:+12409638 | MS.gene60148:CDS |
| CTTGCTTTGCCGGCTCCAGA+TGG | 0.419646 | 8.3:+12411153 | MS.gene60148:CDS |
| GACACTTGAGGGTTTCTTGA+AGG | 0.419795 | 8.3:+12410555 | MS.gene60148:CDS |
| AAGAAGAAATTGAAAAGTGT+TGG | 0.420364 | 8.3:+12410094 | MS.gene60148:CDS |
| ATGGTGCTGCTAAGAATAAT+AGG | 0.420414 | 8.3:+12410275 | MS.gene60148:CDS |
| TTCCAAAATGATGGATGAAT+TGG | 0.426253 | 8.3:+12410444 | MS.gene60148:CDS |
| GTCGCACTCTTACCAATTCC+AGG | 0.429182 | 8.3:-12411123 | None:intergenic |
| AGACACCGGCGGCTGAAATA+GGG | 0.430463 | 8.3:+12410923 | MS.gene60148:CDS |
| TGTTGAAATTTGTGATGTGT+TGG | 0.434833 | 8.3:+12410348 | MS.gene60148:CDS |
| ATGCCACAATTTGGTGGGAT+TGG | 0.436110 | 8.3:+12411387 | MS.gene60148:CDS |
| CAGCTTTCATTTCCCTCACA+GGG | 0.437925 | 8.3:-12410186 | None:intergenic |
| TAAAACTATCCCTCACAATC+TGG | 0.438866 | 8.3:-12410318 | None:intergenic |
| GGCATTCCATAACTCATCAT+AGG | 0.441011 | 8.3:-12411369 | None:intergenic |
| TGAGGCTCATTCTAGTTCTT+GGG | 0.441565 | 8.3:+12410006 | MS.gene60148:CDS |
| GATGGATAGGTTTATGGAAA+TGG | 0.444981 | 8.3:+12410378 | MS.gene60148:CDS |
| TTGAAATTTGTGATGTGTTG+GGG | 0.446185 | 8.3:+12410350 | MS.gene60148:CDS |
| TTTGATTCACTTGTATTGAA+TGG | 0.446884 | 8.3:+12411021 | MS.gene60148:CDS |
| ACAGACAGTGATGCTGCAAA+TGG | 0.448668 | 8.3:-12411204 | None:intergenic |
| CTTACGTATTTGTCATCAGC+AGG | 0.451659 | 8.3:-12409764 | None:intergenic |
| TGTTAGTGCTTCCAAAATGA+TGG | 0.451763 | 8.3:+12410435 | MS.gene60148:CDS |
| ACAGGAGGTTGTTGCGGTCG+AGG | 0.455057 | 8.3:-12410709 | None:intergenic |
| AGTGTGGCATTACCTGGAAT+TGG | 0.461532 | 8.3:+12411111 | MS.gene60148:CDS |
| TTGGGAATGTTGTTGAATCT+GGG | 0.461750 | 8.3:+12410113 | MS.gene60148:CDS |
| AAATTCTTCACCTCAGGCGC+TGG | 0.463279 | 8.3:-12410682 | None:intergenic |
| TCACAACCTATGATGAGTTA+TGG | 0.465190 | 8.3:+12411363 | MS.gene60148:CDS |
| TCTGCTATTTGCACATATGA+AGG | 0.468165 | 8.3:-12411234 | None:intergenic |
| ATCAGCATAGCAAAAGTTGC+TGG | 0.469689 | 8.3:+12409683 | MS.gene60148:CDS |
| TGGCAGCAATATGGGAGAGA+TGG | 0.469904 | 8.3:+12411300 | MS.gene60148:CDS |
| ACAATTTCATCCTCAAATGA+AGG | 0.470020 | 8.3:-12409932 | None:intergenic |
| CCGTCAAGACAGAAGGTTTG+TGG | 0.470020 | 8.3:+12410863 | MS.gene60148:CDS |
| TCTAGTTCTTGGGATCATGC+TGG | 0.471723 | 8.3:+12410016 | MS.gene60148:CDS |
| AGAAGAAATTGAAAAGTGTT+GGG | 0.472704 | 8.3:+12410095 | MS.gene60148:CDS |
| GCTAGTAGTGTGGCATTACC+TGG | 0.474130 | 8.3:+12411105 | MS.gene60148:CDS |
| CAAAGCAATTGGAGCAATGA+AGG | 0.474529 | 8.3:+12409649 | MS.gene60148:CDS |
| GGTGTTAAATTCTTCACCTC+AGG | 0.474870 | 8.3:-12410688 | None:intergenic |
| TGATGGCCACCCTTCATTTG+AGG | 0.483163 | 8.3:+12409922 | MS.gene60148:CDS |
| TTAACCTCCAACCTCTTCTC+AGG | 0.483672 | 8.3:-12410601 | None:intergenic |
| TCTTTAGGCTGCGGAGCCAC+AGG | 0.488305 | 8.3:-12410727 | None:intergenic |
| CAGAAGGCTGATTTGGGAGG+TGG | 0.489303 | 8.3:+12410997 | MS.gene60148:CDS |
| TGAAATAGGGAAAGCAGATT+GGG | 0.491972 | 8.3:+12410936 | MS.gene60148:CDS |
| TGCATTGTTCCATCTGGAGC+CGG | 0.496842 | 8.3:-12411162 | None:intergenic |
| ACAACCAAAACTTCAAGGTC+AGG | 0.498743 | 8.3:-12409716 | None:intergenic |
| CAAGTGGGTTTAACAAGGGT+TGG | 0.502262 | 8.3:+12411333 | MS.gene60148:CDS |
| GGTTTAACAAGGGTTGGAGC+TGG | 0.502377 | 8.3:+12411339 | MS.gene60148:CDS |
| TATGGTTGGTGTAAGGATAT+GGG | 0.503323 | 8.3:+12410475 | MS.gene60148:CDS |
| AGGCTTCTATGGTTGGTGTA+AGG | 0.509267 | 8.3:+12410468 | MS.gene60148:CDS |
| AATTGGCAGGCTTCTATGGT+TGG | 0.517810 | 8.3:+12410461 | MS.gene60148:CDS |
| GGCAGCAATATGGGAGAGAT+GGG | 0.520420 | 8.3:+12411301 | MS.gene60148:CDS |
| ACAAGGCAATAAATTTGCAT+TGG | 0.521522 | 8.3:+12410819 | MS.gene60148:CDS |
| CAGACAGTGATGCTGCAAAT+GGG | 0.527554 | 8.3:-12411203 | None:intergenic |
| GCTTTCCCTATTTCAGCCGC+CGG | 0.527983 | 8.3:-12410928 | None:intergenic |
| AGCAGATTGGGAATTAGCAT+TGG | 0.530343 | 8.3:+12410948 | MS.gene60148:CDS |
| CGAGGAGTTTCTTTAGGCTG+CGG | 0.535656 | 8.3:-12410736 | None:intergenic |
| ATGCCACTCGTAGTGGAATG+AGG | 0.536630 | 8.3:+12409957 | MS.gene60148:CDS |
| GGAGCCGGCAAAGCAAGAAT+CGG | 0.539183 | 8.3:-12411147 | None:intergenic |
| AGATTGGGAATTAGCATTGG+TGG | 0.546066 | 8.3:+12410951 | MS.gene60148:CDS |
| AAGGTCAAGTGGGTTTAACA+AGG | 0.546870 | 8.3:+12411328 | MS.gene60148:CDS |
| GAAGGCTCTTCCAGCGCCTG+AGG | 0.551250 | 8.3:+12410672 | MS.gene60148:CDS |
| TATGGAATGCCACAATTTGG+TGG | 0.551750 | 8.3:+12411381 | MS.gene60148:CDS |
| AAAGAGTCCTGAGAAGAGGT+TGG | 0.551868 | 8.3:+12410594 | MS.gene60148:CDS |
| TAAGAATAATAGGTTAGTGT+TGG | 0.553267 | 8.3:+12410285 | MS.gene60148:CDS |
| ATGGAATGCCACAATTTGGT+GGG | 0.554732 | 8.3:+12411382 | MS.gene60148:CDS |
| GAACAAAGAGTCCTGAGAAG+AGG | 0.555312 | 8.3:+12410590 | MS.gene60148:CDS |
| CGTCAAGACAGAAGGTTTGT+GGG | 0.556434 | 8.3:+12410864 | MS.gene60148:CDS |
| AGCAGATATCAATGAGGTGA+AGG | 0.562071 | 8.3:+12410654 | MS.gene60148:CDS |
| TGGGAATGTTGTTGAATCTG+GGG | 0.565539 | 8.3:+12410114 | MS.gene60148:CDS |
| AGATGGGATGCAAGGTCAAG+TGG | 0.567578 | 8.3:+12411317 | MS.gene60148:CDS |
| TGGTTCTGTGAAGAAGAATG+AGG | 0.569960 | 8.3:+12410147 | MS.gene60148:CDS |
| TTTGGTGGGATTGGACAACC+TGG | 0.572922 | 8.3:+12411396 | MS.gene60148:CDS |
| GCTTCGACCGTCAAGACAGA+AGG | 0.573026 | 8.3:+12410856 | MS.gene60148:CDS |
| ATTGTTCATGCCACTCGTAG+TGG | 0.574986 | 8.3:+12409950 | MS.gene60148:CDS |
| GGTGCATTGTAGTAGCCTCC+AGG | 0.576934 | 8.3:-12411414 | None:intergenic |
| TGCCACTCGTAGTGGAATGA+GGG | 0.578106 | 8.3:+12409958 | MS.gene60148:CDS |
| CCTCGTGTTCAACAAGAGAC+AGG | 0.580723 | 8.3:+12410754 | MS.gene60148:CDS |
| TGAAATTTGTGATGTGTTGG+GGG | 0.582206 | 8.3:+12410351 | MS.gene60148:CDS |
| TAGTAATCTGTCGAAACAGA+AGG | 0.582861 | 8.3:+12410981 | MS.gene60148:CDS |
| AAAATGATGGATGAATTGGC+AGG | 0.583427 | 8.3:+12410448 | MS.gene60148:CDS |
| TGCAAATAGCAGAAATGGAG+AGG | 0.586410 | 8.3:+12411244 | MS.gene60148:CDS |
| GACTTCAGCATGGCAGACAC+CGG | 0.586939 | 8.3:+12410909 | MS.gene60148:CDS |
| CTGCCATGCTGAAGTCACTT+CGG | 0.587835 | 8.3:-12410902 | None:intergenic |
| CAATTTCATCCTCAAATGAA+GGG | 0.588500 | 8.3:-12409931 | None:intergenic |
| TTGAATGGAATGTATGATCA+AGG | 0.590955 | 8.3:+12411036 | MS.gene60148:CDS |
| AAATGATGCTACCCCTGTGA+GGG | 0.591720 | 8.3:+12410174 | MS.gene60148:CDS |
| TGTCCAATCCCACCAAATTG+TGG | 0.594722 | 8.3:-12411390 | None:intergenic |
| TTGCGATTTACCAGATTGTG+AGG | 0.594904 | 8.3:+12410308 | MS.gene60148:CDS |
| GAGTCCTGAGAAGAGGTTGG+AGG | 0.595271 | 8.3:+12410597 | MS.gene60148:CDS |
| GTAAGGATATGGGTATTGCT+AGG | 0.595941 | 8.3:+12410485 | MS.gene60148:CDS |
| CCTGTCTCTTGTTGAACACG+AGG | 0.596634 | 8.3:-12410754 | None:intergenic |
| TTAGGCTGCGGAGCCACAGG+AGG | 0.598625 | 8.3:-12410724 | None:intergenic |
| AGCACTAACATAAAACTCAA+AGG | 0.600537 | 8.3:-12410422 | None:intergenic |
| TATGGGAGAGATGGGATGCA+AGG | 0.609305 | 8.3:+12411309 | MS.gene60148:CDS |
| GATGGAACAATGCAAGCTGT+AGG | 0.610741 | 8.3:+12411171 | MS.gene60148:CDS |
| TGCGATTTACCAGATTGTGA+GGG | 0.612559 | 8.3:+12410309 | MS.gene60148:CDS |
| GAGGGAAATGAAAGCTGAGA+GGG | 0.612777 | 8.3:+12410192 | MS.gene60148:CDS |
| ATTTGCACATATGAAGGTGG+CGG | 0.616726 | 8.3:-12411228 | None:intergenic |
| TCGACCGCAACAACCTCCTG+TGG | 0.619993 | 8.3:+12410711 | MS.gene60148:CDS |
| GGTGTTTCAGCTGATGAACA+AGG | 0.621449 | 8.3:+12410802 | MS.gene60148:CDS |
| AACCCTCATTCCACTACGAG+TGG | 0.623104 | 8.3:-12409960 | None:intergenic |
| GCTATTTGCACATATGAAGG+TGG | 0.631483 | 8.3:-12411231 | None:intergenic |
| TTCAGCATGGCAGACACCGG+CGG | 0.632626 | 8.3:+12410912 | MS.gene60148:CDS |
| TGGTGGGAGTGCTAGTAGTG+TGG | 0.638295 | 8.3:+12411095 | MS.gene60148:CDS |
| AGCACAACTGAGGTGAGTGG+TGG | 0.638502 | 8.3:+12411078 | MS.gene60148:CDS |
| GATGGGATGCAAGGTCAAGT+GGG | 0.639308 | 8.3:+12411318 | MS.gene60148:CDS |
| AAACAGAAGGCTGATTTGGG+AGG | 0.641181 | 8.3:+12410994 | MS.gene60148:CDS |
| AGGTCAAGTGGGTTTAACAA+GGG | 0.654548 | 8.3:+12411329 | MS.gene60148:CDS |
| GGAGCCACAGGAGGTTGTTG+CGG | 0.659960 | 8.3:-12410715 | None:intergenic |
| CTGCACTTCAGGGTACTCAG+AGG | 0.671672 | 8.3:-12410509 | None:intergenic |
| AATGCAAGCTGTAGGAACGC+AGG | 0.672904 | 8.3:+12411179 | MS.gene60148:CDS |
| GCACAACTGAGGTGAGTGGT+GGG | 0.673965 | 8.3:+12411079 | MS.gene60148:CDS |
| TTAGTGAACCTTAGAGACGA+TGG | 0.680919 | 8.3:+12410781 | MS.gene60148:CDS |
| AAAATGATGCTACCCCTGTG+AGG | 0.683408 | 8.3:+12410173 | MS.gene60148:CDS |
| TTTCATCCTCAAATGAAGGG+TGG | 0.684301 | 8.3:-12409928 | None:intergenic |
| AGCTTTCATTTCCCTCACAG+GGG | 0.685348 | 8.3:-12410185 | None:intergenic |
| CATCCGAAGTGACTTCAGCA+TGG | 0.685535 | 8.3:+12410899 | MS.gene60148:CDS |
| TGAGGGAAATGAAAGCTGAG+AGG | 0.694516 | 8.3:+12410191 | MS.gene60148:CDS |
| TTATTCTTAGCAGCACCATG+TGG | 0.695497 | 8.3:-12410271 | None:intergenic |
| GGTGGGATTGGACAACCTGG+AGG | 0.697071 | 8.3:+12411399 | MS.gene60148:CDS |
| GCCAGAAGCAGATATCAATG+AGG | 0.701216 | 8.3:+12410648 | MS.gene60148:CDS |
| GTATTAGGTTGTAAACCACA+TGG | 0.701935 | 8.3:+12410256 | MS.gene60148:CDS |
| GTGAGCACAACTGAGGTGAG+TGG | 0.742823 | 8.3:+12411075 | MS.gene60148:CDS |
| GTGGTTTACAACCTAATACG+CGG | 0.755539 | 8.3:-12410252 | None:intergenic |
| ACAACATGTGAGCACAACTG+AGG | 0.771312 | 8.3:+12411068 | MS.gene60148:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTTACATCTTATTCTAA+AGG | + | chr8.3:12409797-12409816 | MS.gene60148:CDS | 20.0% |
| ! | TAAGAATAATAGGTTAGTGT+TGG | + | chr8.3:12410285-12410304 | MS.gene60148:CDS | 25.0% |
| ! | TTTGATTCACTTGTATTGAA+TGG | + | chr8.3:12411021-12411040 | MS.gene60148:CDS | 25.0% |
| !! | AAGAAGAAATTGAAAAGTGT+TGG | + | chr8.3:12410094-12410113 | MS.gene60148:CDS | 25.0% |
| !! | TGATCAAAAGGTTGAATTTT+TGG | + | chr8.3:12410066-12410085 | MS.gene60148:CDS | 25.0% |
| !!! | AGAAGAAATTGAAAAGTGTT+GGG | + | chr8.3:12410095-12410114 | MS.gene60148:CDS | 25.0% |
| AACAATTATGGCAGCAATAT+GGG | + | chr8.3:12411292-12411311 | MS.gene60148:CDS | 30.0% | |
| ACAAGGCAATAAATTTGCAT+TGG | + | chr8.3:12410819-12410838 | MS.gene60148:CDS | 30.0% | |
| ACAATTTCATCCTCAAATGA+AGG | - | chr8.3:12409935-12409954 | None:intergenic | 30.0% | |
| AGCACTAACATAAAACTCAA+AGG | - | chr8.3:12410425-12410444 | None:intergenic | 30.0% | |
| ATATGTGCAAATAGCAGAAA+TGG | + | chr8.3:12411239-12411258 | MS.gene60148:CDS | 30.0% | |
| CAATTTCATCCTCAAATGAA+GGG | - | chr8.3:12409934-12409953 | None:intergenic | 30.0% | |
| GATTAACAAAAACTCGTGAT+TGG | + | chr8.3:12409855-12409874 | MS.gene60148:CDS | 30.0% | |
| GTTGAAATTTGTGATGTGTT+GGG | + | chr8.3:12410349-12410368 | MS.gene60148:CDS | 30.0% | |
| TGCAATGTATCTTGATCAAA+AGG | + | chr8.3:12410054-12410073 | MS.gene60148:CDS | 30.0% | |
| TGTTGAAATTTGTGATGTGT+TGG | + | chr8.3:12410348-12410367 | MS.gene60148:CDS | 30.0% | |
| TTGAAATTTGTGATGTGTTG+GGG | + | chr8.3:12410350-12410369 | MS.gene60148:CDS | 30.0% | |
| TTGAATGGAATGTATGATCA+AGG | + | chr8.3:12411036-12411055 | MS.gene60148:CDS | 30.0% | |
| TTGTTCAGGAACAACAATTA+TGG | + | chr8.3:12411280-12411299 | MS.gene60148:CDS | 30.0% | |
| ! | AAAATCACTGACAGTCTTTT+AGG | + | chr8.3:12410532-12410551 | MS.gene60148:CDS | 30.0% |
| ! | AAATCACTGACAGTCTTTTA+GGG | + | chr8.3:12410533-12410552 | MS.gene60148:CDS | 30.0% |
| ! | TATGCTTGTTCATAGACTTT+TGG | + | chr8.3:12409898-12409917 | MS.gene60148:CDS | 30.0% |
| !! | TATGAGTGATTTTAGAGATG+AGG | + | chr8.3:12409988-12410007 | MS.gene60148:CDS | 30.0% |
| !! | TTCCAAAATGATGGATGAAT+TGG | + | chr8.3:12410444-12410463 | MS.gene60148:CDS | 30.0% |
| AGTTATGGAATGCCACAATT+TGG | + | chr8.3:12411378-12411397 | MS.gene60148:CDS | 35.0% | |
| CAACAATTATGGCAGCAATA+TGG | + | chr8.3:12411291-12411310 | MS.gene60148:CDS | 35.0% | |
| CTTTGACAACCAAAACTTCA+AGG | - | chr8.3:12409724-12409743 | None:intergenic | 35.0% | |
| GATGGATAGGTTTATGGAAA+TGG | + | chr8.3:12410378-12410397 | MS.gene60148:CDS | 35.0% | |
| TAAAACTATCCCTCACAATC+TGG | - | chr8.3:12410321-12410340 | None:intergenic | 35.0% | |
| TAGTAATCTGTCGAAACAGA+AGG | + | chr8.3:12410981-12411000 | MS.gene60148:CDS | 35.0% | |
| TCACAACCTATGATGAGTTA+TGG | + | chr8.3:12411363-12411382 | MS.gene60148:CDS | 35.0% | |
| TGAAATAGGGAAAGCAGATT+GGG | + | chr8.3:12410936-12410955 | MS.gene60148:CDS | 35.0% | |
| TGAAATTTGTGATGTGTTGG+GGG | + | chr8.3:12410351-12410370 | MS.gene60148:CDS | 35.0% | |
| TGTTAGTGCTTCCAAAATGA+TGG | + | chr8.3:12410435-12410454 | MS.gene60148:CDS | 35.0% | |
| TTGGGAATGTTGTTGAATCT+GGG | + | chr8.3:12410113-12410132 | MS.gene60148:CDS | 35.0% | |
| ! | GTATTAGGTTGTAAACCACA+TGG | + | chr8.3:12410256-12410275 | MS.gene60148:CDS | 35.0% |
| ! | TATGGTTGGTGTAAGGATAT+GGG | + | chr8.3:12410475-12410494 | MS.gene60148:CDS | 35.0% |
| ! | TCTGCTATTTGCACATATGA+AGG | - | chr8.3:12411237-12411256 | None:intergenic | 35.0% |
| ! | TGCCAATTCATCCATCATTT+TGG | - | chr8.3:12410449-12410468 | None:intergenic | 35.0% |
| !! | AAAATGATGGATGAATTGGC+AGG | + | chr8.3:12410448-12410467 | MS.gene60148:CDS | 35.0% |
| !! | ATGGTGCTGCTAAGAATAAT+AGG | + | chr8.3:12410275-12410294 | MS.gene60148:CDS | 35.0% |
| !! | GTTCATAGACTTTTGGTTGA+TGG | + | chr8.3:12409905-12409924 | MS.gene60148:CDS | 35.0% |
| !! | TTTGCATTGGCATTGTTTTC+TGG | + | chr8.3:12410832-12410851 | MS.gene60148:CDS | 35.0% |
| ACAACCAAAACTTCAAGGTC+AGG | - | chr8.3:12409719-12409738 | None:intergenic | 40.0% | |
| ACCTCATTGATATCTGCTTC+TGG | - | chr8.3:12410652-12410671 | None:intergenic | 40.0% | |
| AGCAGATATCAATGAGGTGA+AGG | + | chr8.3:12410654-12410673 | MS.gene60148:CDS | 40.0% | |
| AGCAGATTGGGAATTAGCAT+TGG | + | chr8.3:12410948-12410967 | MS.gene60148:CDS | 40.0% | |
| ATCAGCATAGCAAAAGTTGC+TGG | + | chr8.3:12409683-12409702 | MS.gene60148:CDS | 40.0% | |
| ATGGAATGCCACAATTTGGT+GGG | + | chr8.3:12411382-12411401 | MS.gene60148:CDS | 40.0% | |
| ATTTGCACATATGAAGGTGG+CGG | - | chr8.3:12411231-12411250 | None:intergenic | 40.0% | |
| CAAAGCAATTGGAGCAATGA+AGG | + | chr8.3:12409649-12409668 | MS.gene60148:CDS | 40.0% | |
| CTGAAATAGGGAAAGCAGAT+TGG | + | chr8.3:12410935-12410954 | MS.gene60148:CDS | 40.0% | |
| CTTACGTATTTGTCATCAGC+AGG | - | chr8.3:12409767-12409786 | None:intergenic | 40.0% | |
| GAAGGTTTGTGGGAAGAATT+TGG | + | chr8.3:12410874-12410893 | MS.gene60148:CDS | 40.0% | |
| GCTATTTGCACATATGAAGG+TGG | - | chr8.3:12411234-12411253 | None:intergenic | 40.0% | |
| GGCATTCCATAACTCATCAT+AGG | - | chr8.3:12411372-12411391 | None:intergenic | 40.0% | |
| GGTGTTAAATTCTTCACCTC+AGG | - | chr8.3:12410691-12410710 | None:intergenic | 40.0% | |
| GTGGTTTACAACCTAATACG+CGG | - | chr8.3:12410255-12410274 | None:intergenic | 40.0% | |
| GTTGGGAATGTTGTTGAATC+TGG | + | chr8.3:12410112-12410131 | MS.gene60148:CDS | 40.0% | |
| TATGGAATGCCACAATTTGG+TGG | + | chr8.3:12411381-12411400 | MS.gene60148:CDS | 40.0% | |
| TCAACAATCCGCAAAGCAAT+TGG | + | chr8.3:12409638-12409657 | MS.gene60148:CDS | 40.0% | |
| TCATTGCTCCAATTGCTTTG+CGG | - | chr8.3:12409649-12409668 | None:intergenic | 40.0% | |
| TGAACACGAGGAGTTTCTTT+AGG | - | chr8.3:12410745-12410764 | None:intergenic | 40.0% | |
| TGCAAATAGCAGAAATGGAG+AGG | + | chr8.3:12411244-12411263 | MS.gene60148:CDS | 40.0% | |
| TGCGATTTACCAGATTGTGA+GGG | + | chr8.3:12410309-12410328 | MS.gene60148:CDS | 40.0% | |
| TGGGAATGTTGTTGAATCTG+GGG | + | chr8.3:12410114-12410133 | MS.gene60148:CDS | 40.0% | |
| TTAGTGAACCTTAGAGACGA+TGG | + | chr8.3:12410781-12410800 | MS.gene60148:CDS | 40.0% | |
| TTATTCTTAGCAGCACCATG+TGG | - | chr8.3:12410274-12410293 | None:intergenic | 40.0% | |
| TTGCGATTTACCAGATTGTG+AGG | + | chr8.3:12410308-12410327 | MS.gene60148:CDS | 40.0% | |
| TTTCATCCTCAAATGAAGGG+TGG | - | chr8.3:12409931-12409950 | None:intergenic | 40.0% | |
| ! | AAGGTCAAGTGGGTTTAACA+AGG | + | chr8.3:12411328-12411347 | MS.gene60148:CDS | 40.0% |
| ! | AATGAAAGCTGAGAGGGTTT+TGG | + | chr8.3:12410198-12410217 | MS.gene60148:CDS | 40.0% |
| ! | AGATTGGGAATTAGCATTGG+TGG | + | chr8.3:12410951-12410970 | MS.gene60148:CDS | 40.0% |
| ! | AGGTCAAGTGGGTTTAACAA+GGG | + | chr8.3:12411329-12411348 | MS.gene60148:CDS | 40.0% |
| ! | ATTGCTTTGCGGATTGTTGA+TGG | - | chr8.3:12409638-12409657 | None:intergenic | 40.0% |
| ! | CAGTGATTTTCTGCACTTCA+GGG | - | chr8.3:12410522-12410541 | None:intergenic | 40.0% |
| ! | CTATGGTTGGTGTAAGGATA+TGG | + | chr8.3:12410474-12410493 | MS.gene60148:CDS | 40.0% |
| ! | GTAAGGATATGGGTATTGCT+AGG | + | chr8.3:12410485-12410504 | MS.gene60148:CDS | 40.0% |
| ! | TCAGTGATTTTCTGCACTTC+AGG | - | chr8.3:12410523-12410542 | None:intergenic | 40.0% |
| ! | TCGAAACAGAAGGCTGATTT+GGG | + | chr8.3:12410991-12411010 | MS.gene60148:CDS | 40.0% |
| ! | TGGTTCTGTGAAGAAGAATG+AGG | + | chr8.3:12410147-12410166 | MS.gene60148:CDS | 40.0% |
| !! | AGTCTTTTAGGGACACTTGA+GGG | + | chr8.3:12410544-12410563 | MS.gene60148:CDS | 40.0% |
| !! | ATGAGGCTCATTCTAGTTCT+TGG | + | chr8.3:12410005-12410024 | MS.gene60148:CDS | 40.0% |
| !! | GGTGTTGATGGATAGGTTTA+TGG | + | chr8.3:12410372-12410391 | MS.gene60148:CDS | 40.0% |
| !! | TGAGGCTCATTCTAGTTCTT+GGG | + | chr8.3:12410006-12410025 | MS.gene60148:CDS | 40.0% |
| !!! | GGATCATGCTGGTTTTGTTA+GGG | + | chr8.3:12410027-12410046 | MS.gene60148:CDS | 40.0% |
| AAAATGATGCTACCCCTGTG+AGG | + | chr8.3:12410173-12410192 | MS.gene60148:CDS | 45.0% | |
| AAAGAGTCCTGAGAAGAGGT+TGG | + | chr8.3:12410594-12410613 | MS.gene60148:CDS | 45.0% | |
| AAATGATGCTACCCCTGTGA+GGG | + | chr8.3:12410174-12410193 | MS.gene60148:CDS | 45.0% | |
| AATTGGCAGGCTTCTATGGT+TGG | + | chr8.3:12410461-12410480 | MS.gene60148:CDS | 45.0% | |
| ACAACATGTGAGCACAACTG+AGG | + | chr8.3:12411068-12411087 | MS.gene60148:CDS | 45.0% | |
| ACAGACAGTGATGCTGCAAA+TGG | - | chr8.3:12411207-12411226 | None:intergenic | 45.0% | |
| ACAGCTTGCATTGTTCCATC+TGG | - | chr8.3:12411171-12411190 | None:intergenic | 45.0% | |
| AGCTTTCATTTCCCTCACAG+GGG | - | chr8.3:12410188-12410207 | None:intergenic | 45.0% | |
| AGTGTGGCATTACCTGGAAT+TGG | + | chr8.3:12411111-12411130 | MS.gene60148:CDS | 45.0% | |
| ATTGTTCATGCCACTCGTAG+TGG | + | chr8.3:12409950-12409969 | MS.gene60148:CDS | 45.0% | |
| CAAATTCTCGACCGCGTATT+AGG | + | chr8.3:12410241-12410260 | MS.gene60148:CDS | 45.0% | |
| CAGACAGTGATGCTGCAAAT+GGG | - | chr8.3:12411206-12411225 | None:intergenic | 45.0% | |
| CAGCTTTCATTTCCCTCACA+GGG | - | chr8.3:12410189-12410208 | None:intergenic | 45.0% | |
| CATCAGCAGGAACTTCTTCA+TGG | - | chr8.3:12409754-12409773 | None:intergenic | 45.0% | |
| CCACAAACCTTCTGTCTTGA+CGG | - | chr8.3:12410866-12410885 | None:intergenic | 45.0% | |
| CGTCAAGACAGAAGGTTTGT+GGG | + | chr8.3:12410864-12410883 | MS.gene60148:CDS | 45.0% | |
| CTGAAACACCATCGTCTCTA+AGG | - | chr8.3:12410792-12410811 | None:intergenic | 45.0% | |
| GAACAAAGAGTCCTGAGAAG+AGG | + | chr8.3:12410590-12410609 | MS.gene60148:CDS | 45.0% | |
| GAATCTGGGGATGCTGAATT+TGG | + | chr8.3:12410127-12410146 | MS.gene60148:CDS | 45.0% | |
| GACACTTGAGGGTTTCTTGA+AGG | + | chr8.3:12410555-12410574 | MS.gene60148:CDS | 45.0% | |
| GAGGGAAATGAAAGCTGAGA+GGG | + | chr8.3:12410192-12410211 | MS.gene60148:CDS | 45.0% | |
| GATGAATTGGCAGGCTTCTA+TGG | + | chr8.3:12410457-12410476 | MS.gene60148:CDS | 45.0% | |
| GATGGAACAATGCAAGCTGT+AGG | + | chr8.3:12411171-12411190 | MS.gene60148:CDS | 45.0% | |
| GCCAGAAGCAGATATCAATG+AGG | + | chr8.3:12410648-12410667 | MS.gene60148:CDS | 45.0% | |
| GGTGTTTCAGCTGATGAACA+AGG | + | chr8.3:12410802-12410821 | MS.gene60148:CDS | 45.0% | |
| GTCGAAACAGAAGGCTGATT+TGG | + | chr8.3:12410990-12411009 | MS.gene60148:CDS | 45.0% | |
| TCAGCTTTCATTTCCCTCAC+AGG | - | chr8.3:12410190-12410209 | None:intergenic | 45.0% | |
| TGAGAAGAGGTTGGAGGTTA+AGG | + | chr8.3:12410603-12410622 | MS.gene60148:CDS | 45.0% | |
| TGAGGGAAATGAAAGCTGAG+AGG | + | chr8.3:12410191-12410210 | MS.gene60148:CDS | 45.0% | |
| TGTCCAATCCCACCAAATTG+TGG | - | chr8.3:12411393-12411412 | None:intergenic | 45.0% | |
| TTAACCTCCAACCTCTTCTC+AGG | - | chr8.3:12410604-12410623 | None:intergenic | 45.0% | |
| ! | AGCACCTGACCTTGAAGTTT+TGG | + | chr8.3:12409712-12409731 | MS.gene60148:CDS | 45.0% |
| ! | AGGCTTCTATGGTTGGTGTA+AGG | + | chr8.3:12410468-12410487 | MS.gene60148:CDS | 45.0% |
| ! | ATGCCACAATTTGGTGGGAT+TGG | + | chr8.3:12411387-12411406 | MS.gene60148:CDS | 45.0% |
| ! | CAAGTGGGTTTAACAAGGGT+TGG | + | chr8.3:12411333-12411352 | MS.gene60148:CDS | 45.0% |
| !! | AAACAGAAGGCTGATTTGGG+AGG | + | chr8.3:12410994-12411013 | MS.gene60148:CDS | 45.0% |
| !! | CAGTCTTTTAGGGACACTTG+AGG | + | chr8.3:12410543-12410562 | MS.gene60148:CDS | 45.0% |
| !! | TCTAGTTCTTGGGATCATGC+TGG | + | chr8.3:12410016-12410035 | MS.gene60148:CDS | 45.0% |
| !!! | AAGCTGAGAGGGTTTTGGAT+AGG | + | chr8.3:12410203-12410222 | MS.gene60148:CDS | 45.0% |
| !!! | GGGATCATGCTGGTTTTGTT+AGG | + | chr8.3:12410026-12410045 | MS.gene60148:CDS | 45.0% |
| AAATTCTTCACCTCAGGCGC+TGG | - | chr8.3:12410685-12410704 | None:intergenic | 50.0% | |
| AACCCTCATTCCACTACGAG+TGG | - | chr8.3:12409963-12409982 | None:intergenic | 50.0% | |
| AATGCAAGCTGTAGGAACGC+AGG | + | chr8.3:12411179-12411198 | MS.gene60148:CDS | 50.0% | |
| AGATGGGATGCAAGGTCAAG+TGG | + | chr8.3:12411317-12411336 | MS.gene60148:CDS | 50.0% | |
| CATCCGAAGTGACTTCAGCA+TGG | + | chr8.3:12410899-12410918 | MS.gene60148:CDS | 50.0% | |
| CCGTCAAGACAGAAGGTTTG+TGG | + | chr8.3:12410863-12410882 | MS.gene60148:CDS | 50.0% | |
| CCTCGTGTTCAACAAGAGAC+AGG | + | chr8.3:12410754-12410773 | MS.gene60148:CDS | 50.0% | |
| CCTGTCTCTTGTTGAACACG+AGG | - | chr8.3:12410757-12410776 | None:intergenic | 50.0% | |
| CGAGGAGTTTCTTTAGGCTG+CGG | - | chr8.3:12410739-12410758 | None:intergenic | 50.0% | |
| CTGCCATGCTGAAGTCACTT+CGG | - | chr8.3:12410905-12410924 | None:intergenic | 50.0% | |
| GAAGCAGCACTTGCTTGTTC+AGG | + | chr8.3:12411266-12411285 | MS.gene60148:CDS | 50.0% | |
| GATGGGATGCAAGGTCAAGT+GGG | + | chr8.3:12411318-12411337 | MS.gene60148:CDS | 50.0% | |
| GCTAGTAGTGTGGCATTACC+TGG | + | chr8.3:12411105-12411124 | MS.gene60148:CDS | 50.0% | |
| GGCAGCAATATGGGAGAGAT+GGG | + | chr8.3:12411301-12411320 | MS.gene60148:CDS | 50.0% | |
| GGTTTAACAAGGGTTGGAGC+TGG | + | chr8.3:12411339-12411358 | MS.gene60148:CDS | 50.0% | |
| GTCGCACTCTTACCAATTCC+AGG | - | chr8.3:12411126-12411145 | None:intergenic | 50.0% | |
| TATGGGAGAGATGGGATGCA+AGG | + | chr8.3:12411309-12411328 | MS.gene60148:CDS | 50.0% | |
| TGATGGCCACCCTTCATTTG+AGG | + | chr8.3:12409922-12409941 | MS.gene60148:CDS | 50.0% | |
| TGGCAGCAATATGGGAGAGA+TGG | + | chr8.3:12411300-12411319 | MS.gene60148:CDS | 50.0% | |
| TTTGGTGGGATTGGACAACC+TGG | + | chr8.3:12411396-12411415 | MS.gene60148:CDS | 50.0% | |
| ! | ATGCCACTCGTAGTGGAATG+AGG | + | chr8.3:12409957-12409976 | MS.gene60148:CDS | 50.0% |
| ! | TGCATTGTTCCATCTGGAGC+CGG | - | chr8.3:12411165-12411184 | None:intergenic | 50.0% |
| ! | TGCCACTCGTAGTGGAATGA+GGG | + | chr8.3:12409958-12409977 | MS.gene60148:CDS | 50.0% |
| !! | TGATGTGTTGGGGGTGTTGA+TGG | + | chr8.3:12410360-12410379 | MS.gene60148:CDS | 50.0% |
| !! | TGTTGGGGGTGTTGATGGAT+AGG | + | chr8.3:12410365-12410384 | MS.gene60148:CDS | 50.0% |
| AGACACCGGCGGCTGAAATA+GGG | + | chr8.3:12410923-12410942 | MS.gene60148:CDS | 55.0% | |
| AGCACAACTGAGGTGAGTGG+TGG | + | chr8.3:12411078-12411097 | MS.gene60148:CDS | 55.0% | |
| GACTTCAGCATGGCAGACAC+CGG | + | chr8.3:12410909-12410928 | MS.gene60148:CDS | 55.0% | |
| GAGTCCTGAGAAGAGGTTGG+AGG | + | chr8.3:12410597-12410616 | MS.gene60148:CDS | 55.0% | |
| GCACAACTGAGGTGAGTGGT+GGG | + | chr8.3:12411079-12411098 | MS.gene60148:CDS | 55.0% | |
| GCTTCGACCGTCAAGACAGA+AGG | + | chr8.3:12410856-12410875 | MS.gene60148:CDS | 55.0% | |
| GCTTTCCCTATTTCAGCCGC+CGG | - | chr8.3:12410931-12410950 | None:intergenic | 55.0% | |
| GGAGCCGGCAAAGCAAGAAT+CGG | - | chr8.3:12411150-12411169 | None:intergenic | 55.0% | |
| GGTGCATTGTAGTAGCCTCC+AGG | - | chr8.3:12411417-12411436 | None:intergenic | 55.0% | |
| GTGAGCACAACTGAGGTGAG+TGG | + | chr8.3:12411075-12411094 | MS.gene60148:CDS | 55.0% | |
| ! | CTGCACTTCAGGGTACTCAG+AGG | - | chr8.3:12410512-12410531 | None:intergenic | 55.0% |
| !! | CAGAAGGCTGATTTGGGAGG+TGG | + | chr8.3:12410997-12411016 | MS.gene60148:CDS | 55.0% |
| !! | GACGCCGATTCTTGCTTTGC+CGG | + | chr8.3:12411143-12411162 | MS.gene60148:CDS | 55.0% |
| !! | TGGTGGGAGTGCTAGTAGTG+TGG | + | chr8.3:12411095-12411114 | MS.gene60148:CDS | 55.0% |
| ACAGGAGGTTGTTGCGGTCG+AGG | - | chr8.3:12410712-12410731 | None:intergenic | 60.0% | |
| CAGACACCGGCGGCTGAAAT+AGG | + | chr8.3:12410922-12410941 | MS.gene60148:CDS | 60.0% | |
| GGAGCCACAGGAGGTTGTTG+CGG | - | chr8.3:12410718-12410737 | None:intergenic | 60.0% | |
| GGTGGGATTGGACAACCTGG+AGG | + | chr8.3:12411399-12411418 | MS.gene60148:CDS | 60.0% | |
| TCGACCGCAACAACCTCCTG+TGG | + | chr8.3:12410711-12410730 | MS.gene60148:CDS | 60.0% | |
| TCTTTAGGCTGCGGAGCCAC+AGG | - | chr8.3:12410730-12410749 | None:intergenic | 60.0% | |
| TTCAGCATGGCAGACACCGG+CGG | + | chr8.3:12410912-12410931 | MS.gene60148:CDS | 60.0% | |
| !! | CTTGCTTTGCCGGCTCCAGA+TGG | + | chr8.3:12411153-12411172 | MS.gene60148:CDS | 60.0% |
| GAAGGCTCTTCCAGCGCCTG+AGG | + | chr8.3:12410672-12410691 | MS.gene60148:CDS | 65.0% | |
| TTAGGCTGCGGAGCCACAGG+AGG | - | chr8.3:12410727-12410746 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12409629 | 12411443 | 12409629 | ID=MS.gene60148 |
| chr8.3 | mRNA | 12409629 | 12411443 | 12409629 | ID=MS.gene60148.t1;Parent=MS.gene60148 |
| chr8.3 | exon | 12409629 | 12411443 | 12409629 | ID=MS.gene60148.t1.exon1;Parent=MS.gene60148.t1 |
| chr8.3 | CDS | 12409629 | 12411443 | 12409629 | ID=cds.MS.gene60148.t1;Parent=MS.gene60148.t1 |
| Gene Sequence |
| Protein sequence |
