Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60516.t1 | XP_013469319.1 | 99 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 9.60E-229 | 802.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60516.t1 | Q8GYE0 | 64.6 | 373 | 127 | 3 | 4 | 372 | 5 | 376 | 2.6e-142 | 506.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60516.t1 | A0A072VNK4 | 99.0 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 6.9e-229 | 802.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene60516 | 0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene60516 | 0.810335 | 1.21E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene60516 | 0.811442 | 6.99E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60516.t1 | MTR_1g090873 | 98.980 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 0.0 | 802 |
| MS.gene60516.t1 | MTR_1g090873 | 98.187 | 331 | 6 | 0 | 1 | 331 | 1 | 331 | 0.0 | 668 |
| MS.gene60516.t1 | MTR_4g084650 | 32.424 | 330 | 205 | 8 | 30 | 348 | 72 | 394 | 1.84e-51 | 177 |
| MS.gene60516.t1 | MTR_4g084650 | 33.657 | 309 | 187 | 8 | 30 | 327 | 72 | 373 | 5.27e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60516.t1 | AT3G52190 | 64.267 | 375 | 129 | 3 | 3 | 373 | 4 | 377 | 2.34e-180 | 507 |
| MS.gene60516.t1 | AT5G50550 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.79e-42 | 153 |
| MS.gene60516.t1 | AT5G50650 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.79e-42 | 153 |
| MS.gene60516.t1 | AT2G01470 | 33.673 | 294 | 181 | 9 | 41 | 327 | 76 | 362 | 3.66e-39 | 144 |
Find 112 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAGCATGCGCATAATTT+TGG | 0.182728 | 1.2:-68340477 | MS.gene60516:CDS |
| TCGAGAACTCTGATTCATTC+TGG | 0.214253 | 1.2:-68337758 | MS.gene60516:CDS |
| ATGAGTTCATGGAACAAAAT+AGG | 0.220715 | 1.2:-68339719 | MS.gene60516:CDS |
| GGAACCAAACCATTTCTATT+TGG | 0.223219 | 1.2:-68339900 | MS.gene60516:CDS |
| CGGACAGATTTGTGTGCTTT+TGG | 0.240942 | 1.2:+68340449 | None:intergenic |
| AATCTCAACCTAGTTGTTCT+TGG | 0.269966 | 1.2:-68342572 | MS.gene60516:CDS |
| CTCAGCTTCTAACACAAAAT+TGG | 0.284131 | 1.2:+68341581 | None:intergenic |
| AGATAACCTTTCCAATCTTT+AGG | 0.319043 | 1.2:+68338400 | None:intergenic |
| ACACAAATCTGTCCGGGATA+TGG | 0.322553 | 1.2:-68340441 | MS.gene60516:CDS |
| GTAGACAAAGAAACGGTTAT+AGG | 0.338185 | 1.2:+68342494 | None:intergenic |
| CTGATGGTTCAGCGAGAATC+TGG | 0.344529 | 1.2:-68340121 | MS.gene60516:CDS |
| GGATGGACACCTCAGAATTA+TGG | 0.345586 | 1.2:-68340504 | MS.gene60516:CDS |
| AAATGGTTTGGTTCCATCCT+TGG | 0.346387 | 1.2:+68339908 | None:intergenic |
| CTGTAGAGGGGTTAGTTCCT+TGG | 0.349847 | 1.2:+68340708 | None:intergenic |
| CTCATCATTGGTTTAAACCT+TGG | 0.350046 | 1.2:+68337702 | None:intergenic |
| CTCAGGGTCCGGTTACTTGC+GGG | 0.357610 | 1.2:-68342616 | MS.gene60516:CDS |
| CTATTTGGCGCCGTTCAAAA+AGG | 0.360925 | 1.2:-68339885 | MS.gene60516:intron |
| TTCTTTGTCTACTTCCCCTT+TGG | 0.362793 | 1.2:-68342483 | MS.gene60516:intron |
| CACTAAAAGTAATACATGTC+TGG | 0.366135 | 1.2:+68340674 | None:intergenic |
| GATTGAGGGTCTCTCATCAT+TGG | 0.378056 | 1.2:+68337690 | None:intergenic |
| CGAGAACTCTGATTCATTCT+GGG | 0.383127 | 1.2:-68337757 | MS.gene60516:CDS |
| ATCCATGACCCGCAAGTAAC+CGG | 0.389128 | 1.2:+68342608 | None:intergenic |
| TGCAGATTGTTTGAGCTCTA+TGG | 0.390492 | 1.2:-68340757 | MS.gene60516:intron |
| CTCAATCATTTGATGATCAA+TGG | 0.390908 | 1.2:-68337674 | MS.gene60516:CDS |
| TAAGTCTCTTACAGCGGTTT+GGG | 0.395510 | 1.2:-68339744 | MS.gene60516:CDS |
| TTACTTGCGGGTCATGGATT+CGG | 0.400800 | 1.2:-68342604 | MS.gene60516:CDS |
| ATAAGTCTCTTACAGCGGTT+TGG | 0.404946 | 1.2:-68339745 | MS.gene60516:CDS |
| TGAGTTCATGGAACAAAATA+GGG | 0.405250 | 1.2:-68339718 | MS.gene60516:CDS |
| TCAATCATTTGATGATCAAT+GGG | 0.405468 | 1.2:-68337673 | MS.gene60516:CDS |
| AACTGAATGTACCTAAAGAT+TGG | 0.410490 | 1.2:-68338411 | MS.gene60516:CDS |
| GGTTTAAACCTTGGTCTAGC+TGG | 0.411531 | 1.2:+68337711 | None:intergenic |
| GGCGCCAAATAGAAATGGTT+TGG | 0.423691 | 1.2:+68339896 | None:intergenic |
| CGGTTTGGGATATGAGTTCA+TGG | 0.428050 | 1.2:-68339730 | MS.gene60516:CDS |
| GTCCGGTTACTTGCGGGTCA+TGG | 0.431039 | 1.2:-68342610 | MS.gene60516:CDS |
| GGTGTAGTCTCTTGCTATAA+TGG | 0.431141 | 1.2:+68338708 | None:intergenic |
| TGTAGAGGGGTTAGTTCCTT+GGG | 0.433022 | 1.2:+68340709 | None:intergenic |
| TGAACGGCGCCAAATAGAAA+TGG | 0.434674 | 1.2:+68339891 | None:intergenic |
| ACTTACAACCTCAGTAGAAT+GGG | 0.444696 | 1.2:-68338449 | MS.gene60516:CDS |
| GAGAAAATCTGAAGCAAAGC+AGG | 0.450891 | 1.2:+68342524 | None:intergenic |
| TGCTGGATCACCTCAGGGTC+CGG | 0.464290 | 1.2:-68342627 | MS.gene60516:CDS |
| TAGACAAAGAAACGGTTATA+GGG | 0.466115 | 1.2:+68342495 | None:intergenic |
| GAATGATGCTGGATCACCTC+AGG | 0.466193 | 1.2:-68342633 | MS.gene60516:CDS |
| TACTTACAACCTCAGTAGAA+TGG | 0.468911 | 1.2:-68338450 | MS.gene60516:CDS |
| GGGTGCACAGCAATAGCAAC+CGG | 0.474667 | 1.2:+68341549 | None:intergenic |
| CAAGGAACTAACCCCTCTAC+AGG | 0.483255 | 1.2:-68340707 | MS.gene60516:CDS |
| TTCATTCTGGGGATTTCCAA+TGG | 0.490439 | 1.2:-68337745 | MS.gene60516:CDS |
| CTCAGTAGAATGGGGAGCAT+TGG | 0.494832 | 1.2:-68338440 | MS.gene60516:CDS |
| CTAACCCCTCTACAGGGTAT+TGG | 0.495022 | 1.2:-68340700 | MS.gene60516:CDS |
| ATATAGGTTCTTACAGAGAA+AGG | 0.496610 | 1.2:+68339636 | None:intergenic |
| CAAAAGCACACAAATCTGTC+CGG | 0.496650 | 1.2:-68340448 | MS.gene60516:CDS |
| CATTGATCATCAAATGATTG+AGG | 0.497207 | 1.2:+68337675 | None:intergenic |
| GGATCTAAATTTGCTGCTGG+TGG | 0.498037 | 1.2:-68340646 | MS.gene60516:CDS |
| CCTCAGGGTCCGGTTACTTG+CGG | 0.499353 | 1.2:-68342617 | MS.gene60516:CDS |
| CGGTACAACTATCGCAACAT+TGG | 0.505371 | 1.2:-68338684 | MS.gene60516:CDS |
| AGGACAAGAATTTCCACGCT+TGG | 0.506092 | 1.2:+68342544 | None:intergenic |
| TCATTCTGGGGATTTCCAAT+GGG | 0.509589 | 1.2:-68337744 | MS.gene60516:CDS |
| TAAACCTTGGTCTAGCTGGT+TGG | 0.510557 | 1.2:+68337715 | None:intergenic |
| CTAGCTTCAACTTCTACTGA+TGG | 0.515435 | 1.2:-68340137 | MS.gene60516:CDS |
| GATGGATCTAAATTTGCTGC+TGG | 0.516767 | 1.2:-68340649 | MS.gene60516:CDS |
| ATTGATCATCAAATGATTGA+GGG | 0.517917 | 1.2:+68337676 | None:intergenic |
| TGCAGAGTGGCAGATATACT+TGG | 0.519271 | 1.2:-68337829 | MS.gene60516:intron |
| TCCAAAATTATGCGCATGCT+AGG | 0.524567 | 1.2:+68340476 | None:intergenic |
| ACTAAAAGTAATACATGTCT+GGG | 0.525288 | 1.2:+68340675 | None:intergenic |
| AGAAGCTGAGGAAGGTGATC+CGG | 0.530482 | 1.2:-68341568 | MS.gene60516:CDS |
| TGGATTTCTGTCCTAGTGAA+AGG | 0.533688 | 1.2:-68338664 | MS.gene60516:intron |
| TCAACCTAGTTGTTCTTGGA+AGG | 0.537175 | 1.2:-68342568 | MS.gene60516:CDS |
| TAATGGCCGTTAGCCACGAC+GGG | 0.539256 | 1.2:-68339664 | MS.gene60516:CDS |
| AGACGCGGTCACATATCTAC+TGG | 0.544878 | 1.2:+68337648 | None:intergenic |
| ATTTGGATGGAGAATGATGC+TGG | 0.544930 | 1.2:-68342644 | None:intergenic |
| GAGAACTCTGATTCATTCTG+GGG | 0.547394 | 1.2:-68337756 | MS.gene60516:CDS |
| TGGACCTTCCAAGAACAACT+AGG | 0.547578 | 1.2:+68342564 | None:intergenic |
| TGTACCTAAAATCCATATCC+CGG | 0.552105 | 1.2:+68340429 | None:intergenic |
| GATCTAAATTTGCTGCTGGT+GGG | 0.552966 | 1.2:-68340645 | MS.gene60516:CDS |
| GTATTTCCCGTCGTGGCTAA+CGG | 0.556419 | 1.2:+68339658 | None:intergenic |
| TAGAAAGTCTGCTTCAGTAA+TGG | 0.572648 | 1.2:-68339681 | MS.gene60516:CDS |
| GGAACAAAATAGGGCACAAG+AGG | 0.574914 | 1.2:-68339709 | MS.gene60516:CDS |
| AGAAACGGTTATAGGGTCAA+AGG | 0.575993 | 1.2:+68342502 | None:intergenic |
| AAAAGCACACAAATCTGTCC+GGG | 0.581294 | 1.2:-68340447 | MS.gene60516:CDS |
| CACATAAAATCATCACCGCT+AGG | 0.583548 | 1.2:+68341528 | None:intergenic |
| GACCACTCTGTCTCGCAACT+CGG | 0.583764 | 1.2:-68340075 | MS.gene60516:intron |
| TAAATTTGCTGCTGGTGGGT+CGG | 0.586472 | 1.2:-68340641 | MS.gene60516:intron |
| GTGGATATTTACCTTTCACT+AGG | 0.590688 | 1.2:+68338653 | None:intergenic |
| GGGAACCAATACCCTGTAGA+GGG | 0.595092 | 1.2:+68340695 | None:intergenic |
| AGGGGATAAGTCTCTTACAG+CGG | 0.605985 | 1.2:-68339750 | MS.gene60516:CDS |
| TTTATGTGCTCTTTGAGCAA+TGG | 0.610268 | 1.2:-68341513 | MS.gene60516:CDS |
| TTGCGAGACAGAGTGGTCAC+AGG | 0.610478 | 1.2:+68340080 | None:intergenic |
| AGGGGAAGTAGACAAAGAAA+CGG | 0.613448 | 1.2:+68342487 | None:intergenic |
| AATGTACCTAAAGATTGGAA+AGG | 0.615590 | 1.2:-68338406 | MS.gene60516:intron |
| ACATAAAATCATCACCGCTA+GGG | 0.616388 | 1.2:+68341529 | None:intergenic |
| TGGGAACCAATACCCTGTAG+AGG | 0.620085 | 1.2:+68340694 | None:intergenic |
| TTTGTGTTAGAAGCTGAGGA+AGG | 0.624346 | 1.2:-68341576 | MS.gene60516:CDS |
| GTAATGGCCGTTAGCCACGA+CGG | 0.633207 | 1.2:-68339665 | MS.gene60516:CDS |
| AGAATCTGGAAGGTTGAAGA+CGG | 0.646935 | 1.2:-68340107 | MS.gene60516:CDS |
| GAGAAAGGTATTTCCCGTCG+TGG | 0.646943 | 1.2:+68339651 | None:intergenic |
| AAACATGAAACTGTTGCCCA+AGG | 0.647320 | 1.2:-68340725 | MS.gene60516:CDS |
| GTTCTTGGAAGGTCCAAGCG+TGG | 0.648572 | 1.2:-68342557 | MS.gene60516:CDS |
| CAATGCTCCCCATTCTACTG+AGG | 0.662088 | 1.2:+68338441 | None:intergenic |
| TAGGCCACTCCATAATTCTG+AGG | 0.667952 | 1.2:+68340495 | None:intergenic |
| TGGTTCAGCGAGAATCTGGA+AGG | 0.668492 | 1.2:-68340117 | MS.gene60516:CDS |
| TACCGAGTTGCGAGACAGAG+TGG | 0.677017 | 1.2:+68340073 | None:intergenic |
| AAAACCAACCAGCTAGACCA+AGG | 0.678469 | 1.2:-68337719 | MS.gene60516:CDS |
| AAGGAACTAACCCCTCTACA+GGG | 0.679695 | 1.2:-68340706 | MS.gene60516:CDS |
| GACACCTCAGAATTATGGAG+TGG | 0.680012 | 1.2:-68340499 | MS.gene60516:CDS |
| AATGATGCTGGATCACCTCA+GGG | 0.681405 | 1.2:-68342632 | MS.gene60516:CDS |
| CCGCAAGTAACCGGACCCTG+AGG | 0.684658 | 1.2:+68342617 | None:intergenic |
| GGAACCAATACCCTGTAGAG+GGG | 0.704785 | 1.2:+68340696 | None:intergenic |
| GCTATTGCTGTGCACCCTAG+CGG | 0.708254 | 1.2:-68341543 | MS.gene60516:CDS |
| CAATCATTTGATGATCAATG+GGG | 0.709097 | 1.2:-68337672 | MS.gene60516:CDS |
| CTTACAACCTCAGTAGAATG+GGG | 0.712274 | 1.2:-68338448 | MS.gene60516:CDS |
| ATTGAAGAGGAATACCAAAG+GGG | 0.723778 | 1.2:+68342469 | None:intergenic |
| ATGTTGCGATAGTTGTACCG+AGG | 0.735547 | 1.2:+68338687 | None:intergenic |
| TATAGCAAGAGACTACACCT+CGG | 0.778640 | 1.2:-68338704 | MS.gene60516:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTAATTTTTATAT+TGG | + | chr1.2:68339215-68339234 | None:intergenic | 0.0% |
| !! | TTCTAAACTTAAAATAAAAA+GGG | + | chr1.2:68337933-68337952 | None:intergenic | 10.0% |
| !! | TTTCTAAACTTAAAATAAAA+AGG | + | chr1.2:68337934-68337953 | None:intergenic | 10.0% |
| !! | ATATAAGTATTTATGCTATA+AGG | + | chr1.2:68338045-68338064 | None:intergenic | 15.0% |
| !! | ATGATTGATATTAATCAAAA+AGG | + | chr1.2:68341674-68341693 | None:intergenic | 15.0% |
| !! | TAAGTTTATAATAAAACAGT+TGG | + | chr1.2:68338103-68338122 | None:intergenic | 15.0% |
| !! | TATAAGTATTTATGCTATAA+GGG | + | chr1.2:68338044-68338063 | None:intergenic | 15.0% |
| !! | TTAAACATATTTAAGTCATT+TGG | - | chr1.2:68340707-68340726 | MS.gene60516:CDS | 15.0% |
| !!! | AAAAAGAAAATTTTGGATAA+AGG | + | chr1.2:68340328-68340347 | None:intergenic | 15.0% |
| !!! | AAAAGAAAATTTTGGATAAA+GGG | + | chr1.2:68340327-68340346 | None:intergenic | 15.0% |
| !!! | AAAAGACAAAAAGAAAATTT+TGG | + | chr1.2:68340335-68340354 | None:intergenic | 15.0% |
| !!! | AATTTTCTTTTTGTCTTTTT+AGG | - | chr1.2:68340336-68340355 | MS.gene60516:intron | 15.0% |
| !!! | AGTTTACCTTTTAAAATAAT+TGG | + | chr1.2:68341449-68341468 | None:intergenic | 15.0% |
| !!! | ATTAATGATGTTTAAAATTG+TGG | - | chr1.2:68342249-68342268 | MS.gene60516:intron | 15.0% |
| !!! | ATTAGTCCAATTATTTTAAA+AGG | - | chr1.2:68341440-68341459 | MS.gene60516:intron | 15.0% |
| !!! | ATTATTTCTGTTATATTCTA+TGG | + | chr1.2:68341977-68341996 | None:intergenic | 15.0% |
| !!! | TTTATGTGAGTTTTTTAAAA+AGG | - | chr1.2:68341020-68341039 | MS.gene60516:intron | 15.0% |
| !!! | TTTTTCAAAAATGATATTGA+GGG | - | chr1.2:68339271-68339290 | MS.gene60516:intron | 15.0% |
| !!! | TTTTTTCAAAAATGATATTG+AGG | - | chr1.2:68339270-68339289 | MS.gene60516:intron | 15.0% |
| !! | AAAAACTGTGCAAAAAAATT+TGG | + | chr1.2:68339026-68339045 | None:intergenic | 20.0% |
| !! | AAAACTATAATTGTAAGGAA+AGG | + | chr1.2:68340957-68340976 | None:intergenic | 20.0% |
| !! | AAAAGTTTAAAAAAATGCAG+TGG | - | chr1.2:68341735-68341754 | MS.gene60516:intron | 20.0% |
| !! | ATTCCAAAACTATAATTGTA+AGG | + | chr1.2:68340962-68340981 | None:intergenic | 20.0% |
| !! | CAAATTGAATTTGAATTGTT+TGG | - | chr1.2:68339164-68339183 | MS.gene60516:intron | 20.0% |
| !! | TGGTTAATGAATATATAACA+AGG | + | chr1.2:68342311-68342330 | None:intergenic | 20.0% |
| !! | TTTCATGAAATATTTGAGAA+GGG | - | chr1.2:68341074-68341093 | MS.gene60516:intron | 20.0% |
| !!! | AAAGAAAATTTTGGATAAAG+GGG | + | chr1.2:68340326-68340345 | None:intergenic | 20.0% |
| !!! | AGCTTTTATTATTTTATGCA+GGG | - | chr1.2:68341818-68341837 | MS.gene60516:intron | 20.0% |
| !!! | ATCAGATTTCTGTAATTTTA+GGG | - | chr1.2:68341511-68341530 | MS.gene60516:CDS | 20.0% |
| !!! | ATTAGAATTTAGAATTCTAC+TGG | + | chr1.2:68339946-68339965 | None:intergenic | 20.0% |
| !!! | ATTGTCCTTTAAAAAGTTAA+AGG | + | chr1.2:68338980-68338999 | None:intergenic | 20.0% |
| !!! | CATAGTTTTGTAAATATTAG+TGG | - | chr1.2:68341393-68341412 | MS.gene60516:intron | 20.0% |
| !!! | GGTATAGTCTTTTTTATTTA+AGG | - | chr1.2:68340240-68340259 | MS.gene60516:intron | 20.0% |
| !!! | TAAACTTTTGTGAGATTATT+AGG | + | chr1.2:68338319-68338338 | None:intergenic | 20.0% |
| !!! | TAGTTTTGGAATTGTTTATA+AGG | - | chr1.2:68340970-68340989 | MS.gene60516:intron | 20.0% |
| !!! | TTTCCTTACAATTATAGTTT+TGG | - | chr1.2:68340956-68340975 | MS.gene60516:intron | 20.0% |
| !!! | TTTTCATGAAATATTTGAGA+AGG | - | chr1.2:68341073-68341092 | MS.gene60516:intron | 20.0% |
| ! | AAAATCAACATCAATTCAGA+TGG | - | chr1.2:68342019-68342038 | MS.gene60516:intron | 25.0% |
| ! | AAAGCTACTACTTTAAGTAA+CGG | - | chr1.2:68338926-68338945 | MS.gene60516:intron | 25.0% |
| ! | AATGGTTAATGAATATGACA+TGG | - | chr1.2:68342084-68342103 | MS.gene60516:intron | 25.0% |
| ! | AATTAGAAATGAGCATCATA+AGG | + | chr1.2:68340898-68340917 | None:intergenic | 25.0% |
| ! | ACAGCATAAAAACAATTTGT+TGG | + | chr1.2:68339697-68339716 | None:intergenic | 25.0% |
| ! | ACTAAAAGTAATACATGTCT+GGG | + | chr1.2:68339622-68339641 | None:intergenic | 25.0% |
| ! | ATATAGTTTGAGAATTGAAG+AGG | + | chr1.2:68337841-68337860 | None:intergenic | 25.0% |
| ! | ATTATTCATAAAAGAGAGCA+AGG | + | chr1.2:68338850-68338869 | None:intergenic | 25.0% |
| ! | ATTGATCATCAAATGATTGA+GGG | + | chr1.2:68342621-68342640 | None:intergenic | 25.0% |
| ! | CAAATTTGACAACAACAATA+TGG | + | chr1.2:68342376-68342395 | None:intergenic | 25.0% |
| ! | CTACTCTTAAGAAATAAGTA+CGG | + | chr1.2:68339460-68339479 | None:intergenic | 25.0% |
| ! | GCATAAAATAATAAAAGCTC+AGG | + | chr1.2:68341817-68341836 | None:intergenic | 25.0% |
| ! | TAAACATTCGTGAGATTATT+AGG | + | chr1.2:68338430-68338449 | None:intergenic | 25.0% |
| ! | TAAGCATTTGTGAGATTATT+AGG | + | chr1.2:68338203-68338222 | None:intergenic | 25.0% |
| ! | TAATTAAGCTATAAGCTGTA+AGG | - | chr1.2:68338345-68338364 | MS.gene60516:intron | 25.0% |
| ! | TGTTTATTTAACACAAACTG+TGG | + | chr1.2:68342215-68342234 | None:intergenic | 25.0% |
| ! | TTGAGCAAAAGAAAATGATT+TGG | + | chr1.2:68340834-68340853 | None:intergenic | 25.0% |
| ! | TTGTGGTTAATTACATTTAG+AGG | - | chr1.2:68342266-68342285 | MS.gene60516:intron | 25.0% |
| ! | TTTAGAGGATGATTAATGAT+TGG | - | chr1.2:68342281-68342300 | MS.gene60516:intron | 25.0% |
| !! | CATCAGATTTCTGTAATTTT+AGG | - | chr1.2:68341510-68341529 | MS.gene60516:CDS | 25.0% |
| !! | GTGTATGACATAATAGTTTT+AGG | - | chr1.2:68339072-68339091 | MS.gene60516:intron | 25.0% |
| !! | GTTAATGTCGTTTAAATATG+TGG | - | chr1.2:68342045-68342064 | MS.gene60516:intron | 25.0% |
| !! | TCAATCATTTGATGATCAAT+GGG | - | chr1.2:68342621-68342640 | MS.gene60516:CDS | 25.0% |
| !! | TGGATTTGAACAAATACTTT+TGG | - | chr1.2:68341186-68341205 | MS.gene60516:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.2:68338016-68338035 | None:intergenic | 25.0% |
| !!! | AAAATGATTTGGTAATCTCT+AGG | + | chr1.2:68340823-68340842 | None:intergenic | 25.0% |
| !!! | CTGTTCCTTTAACTTTTTAA+AGG | - | chr1.2:68338972-68338991 | MS.gene60516:intron | 25.0% |
| !!! | CTTTTTTATTTAAGGACCTT+TGG | - | chr1.2:68340248-68340267 | MS.gene60516:intron | 25.0% |
| !!! | GAGAAAGTTATAGCTATTTT+AGG | - | chr1.2:68341050-68341069 | MS.gene60516:intron | 25.0% |
| !!! | GAGCTTTTATTATTTTATGC+AGG | - | chr1.2:68341817-68341836 | MS.gene60516:intron | 25.0% |
| !!! | TGGTTTTAATCTTGAGTTTT+TGG | - | chr1.2:68338623-68338642 | MS.gene60516:intron | 25.0% |
| !!! | TGTATTACTTTTAGTGTTGA+TGG | - | chr1.2:68339627-68339646 | MS.gene60516:intron | 25.0% |
| !!! | TTATTTTGTGAATTCCCTTT+TGG | - | chr1.2:68338520-68338539 | MS.gene60516:intron | 25.0% |
| AACTGAATGTACCTAAAGAT+TGG | - | chr1.2:68341883-68341902 | MS.gene60516:intron | 30.0% | |
| AAGACAGAAGTAAAACATAC+AGG | + | chr1.2:68339759-68339778 | None:intergenic | 30.0% | |
| AATGTACCTAAAGATTGGAA+AGG | - | chr1.2:68341888-68341907 | MS.gene60516:intron | 30.0% | |
| AATTGAAGAGGAATACCAAA+GGG | + | chr1.2:68337829-68337848 | None:intergenic | 30.0% | |
| ACTTATTAACTGTCCATTGA+AGG | - | chr1.2:68342114-68342133 | MS.gene60516:intron | 30.0% | |
| AGATAACCTTTCCAATCTTT+AGG | + | chr1.2:68341897-68341916 | None:intergenic | 30.0% | |
| AGGATTTATGTTCGAATTGA+CGG | + | chr1.2:68341353-68341372 | None:intergenic | 30.0% | |
| ATATAGGTTCTTACAGAGAA+AGG | + | chr1.2:68340661-68340680 | None:intergenic | 30.0% | |
| ATGAGTTCATGGAACAAAAT+AGG | - | chr1.2:68340575-68340594 | MS.gene60516:intron | 30.0% | |
| ATTTCTCAGCTAAAACCAAA+AGG | + | chr1.2:68338538-68338557 | None:intergenic | 30.0% | |
| CAAAACAATTGATATGTGCA+AGG | + | chr1.2:68340687-68340706 | None:intergenic | 30.0% | |
| CACTAAAAGTAATACATGTC+TGG | + | chr1.2:68339623-68339642 | None:intergenic | 30.0% | |
| CATTGATCATCAAATGATTG+AGG | + | chr1.2:68342622-68342641 | None:intergenic | 30.0% | |
| GATATGTGCAAGGTAAATAT+AGG | + | chr1.2:68340677-68340696 | None:intergenic | 30.0% | |
| GCTTATATGTTATAAGCTTG+CGG | - | chr1.2:68339414-68339433 | MS.gene60516:intron | 30.0% | |
| GGCCTAAAATTTCAATCTAT+TGG | - | chr1.2:68341756-68341775 | MS.gene60516:intron | 30.0% | |
| GGTTAATTACACTCAATGAA+TGG | - | chr1.2:68342066-68342085 | MS.gene60516:intron | 30.0% | |
| GTTAAAGGAACAGAAAATGT+TGG | + | chr1.2:68338965-68338984 | None:intergenic | 30.0% | |
| TAATCATGATCAAGTCATCT+AGG | - | chr1.2:68340796-68340815 | MS.gene60516:intron | 30.0% | |
| TAGACAAAGAAACGGTTATA+GGG | + | chr1.2:68337802-68337821 | None:intergenic | 30.0% | |
| TATATTCTATGGTCTCAGAA+AGG | + | chr1.2:68341966-68341985 | None:intergenic | 30.0% | |
| TATCCCCTAATCAAAATTAG+AGG | + | chr1.2:68340532-68340551 | None:intergenic | 30.0% | |
| TATGCCTGTATATAACCTAT+AGG | - | chr1.2:68338221-68338240 | MS.gene60516:intron | 30.0% | |
| TCAAGTATGACCTTAATCAT+TGG | - | chr1.2:68340504-68340523 | MS.gene60516:CDS | 30.0% | |
| TCACGAATGTTTATACAAGT+AGG | - | chr1.2:68338437-68338456 | MS.gene60516:CDS | 30.0% | |
| TGAAGTAGAACTGTTAGTAA+CGG | + | chr1.2:68339385-68339404 | None:intergenic | 30.0% | |
| TGACAAAACGAAAGACAATA+CGG | + | chr1.2:68340113-68340132 | None:intergenic | 30.0% | |
| TGAGTTCATGGAACAAAATA+GGG | - | chr1.2:68340576-68340595 | MS.gene60516:intron | 30.0% | |
| TGTTTGGATCAACTTATTTC+AGG | + | chr1.2:68338466-68338485 | None:intergenic | 30.0% | |
| TTAACACAAACTGTGGTTAA+TGG | + | chr1.2:68342208-68342227 | None:intergenic | 30.0% | |
| TTGACTATAACGATTCTGAA+AGG | + | chr1.2:68341373-68341392 | None:intergenic | 30.0% | |
| TTTAAGTCATTTGGATAGCA+AGG | - | chr1.2:68340716-68340735 | MS.gene60516:CDS | 30.0% | |
| TTTATTTAAGGACCTTTGGA+AGG | - | chr1.2:68340252-68340271 | MS.gene60516:intron | 30.0% | |
| TTTCTCAGCTAAAACCAAAA+GGG | + | chr1.2:68338537-68338556 | None:intergenic | 30.0% | |
| TTTGACAACAACAATATGGA+TGG | + | chr1.2:68342372-68342391 | None:intergenic | 30.0% | |
| TTTGTCATATCTCAGAACTA+AGG | - | chr1.2:68341135-68341154 | MS.gene60516:intron | 30.0% | |
| ! | ACGATTGTGAATGTGTTTTA+TGG | + | chr1.2:68341943-68341962 | None:intergenic | 30.0% |
| ! | AGATGAATGCATCTTTTAGA+AGG | + | chr1.2:68339917-68339936 | None:intergenic | 30.0% |
| ! | ATCATTCATGAACACACTTT+TGG | - | chr1.2:68341689-68341708 | MS.gene60516:intron | 30.0% |
| ! | CAATCATTTGATGATCAATG+GGG | - | chr1.2:68342622-68342641 | MS.gene60516:CDS | 30.0% |
| ! | CTAATTTTATCTGTGATGCA+CGG | + | chr1.2:68341425-68341444 | None:intergenic | 30.0% |
| ! | CTCAATCATTTGATGATCAA+TGG | - | chr1.2:68342620-68342639 | MS.gene60516:CDS | 30.0% |
| ! | GATACTCATACCTTTTTGAA+CGG | + | chr1.2:68340422-68340441 | None:intergenic | 30.0% |
| ! | GGCCAATAGATTGAAATTTT+AGG | + | chr1.2:68341761-68341780 | None:intergenic | 30.0% |
| ! | TCATTCATGAACACACTTTT+GGG | - | chr1.2:68341690-68341709 | MS.gene60516:intron | 30.0% |
| ! | TTTTTCCTGAACAAGATTGT+TGG | - | chr1.2:68338561-68338580 | MS.gene60516:intron | 30.0% |
| !! | AACAACTAGGTTGAGATTTT+CGG | + | chr1.2:68337720-68337739 | None:intergenic | 30.0% |
| !! | ATAATTCTGCTTTTGAAGAG+TGG | - | chr1.2:68338603-68338622 | MS.gene60516:intron | 30.0% |
| !! | ATTAGAGGTACCAATGATTA+AGG | + | chr1.2:68340517-68340536 | None:intergenic | 30.0% |
| !! | GAGTTTTTGGATCATGTAAT+TGG | - | chr1.2:68338636-68338655 | MS.gene60516:intron | 30.0% |
| !! | TGAAATAAGTTGATCCAAAC+AGG | - | chr1.2:68338465-68338484 | MS.gene60516:intron | 30.0% |
| !! | TTATTTTATCACGTGATGTG+AGG | + | chr1.2:68342176-68342195 | None:intergenic | 30.0% |
| !!! | AATTGTTTTTATGCTGTGTG+TGG | - | chr1.2:68339700-68339719 | MS.gene60516:CDS | 30.0% |
| !!! | AATTTTAGGGCAAGTAAAGA+TGG | - | chr1.2:68341524-68341543 | MS.gene60516:CDS | 30.0% |
| !!! | GGTACCTCTAATTTTGATTA+GGG | - | chr1.2:68340525-68340544 | MS.gene60516:intron | 30.0% |
| !!! | GTACCTCTAATTTTGATTAG+GGG | - | chr1.2:68340526-68340545 | MS.gene60516:intron | 30.0% |
| !!! | TAATAGTTTTAGGCTCAGTT+TGG | - | chr1.2:68339082-68339101 | MS.gene60516:intron | 30.0% |
| !!! | TGAATTATGTCGATTTTCCA+AGG | - | chr1.2:68340369-68340388 | MS.gene60516:intron | 30.0% |
| !!! | TGGTACCTCTAATTTTGATT+AGG | - | chr1.2:68340524-68340543 | MS.gene60516:intron | 30.0% |
| AAATCTTCAGATCCTTCCAA+AGG | + | chr1.2:68340267-68340286 | None:intergenic | 35.0% | |
| AATCTAAACCATAGAACTCG+AGG | + | chr1.2:68339498-68339517 | None:intergenic | 35.0% | |
| AATCTCAACCTAGTTGTTCT+TGG | - | chr1.2:68337722-68337741 | MS.gene60516:CDS | 35.0% | |
| ACAACAACAATATGGATGGT+TGG | + | chr1.2:68342368-68342387 | None:intergenic | 35.0% | |
| ACAGCCTATAGGTTATATAC+AGG | + | chr1.2:68338228-68338247 | None:intergenic | 35.0% | |
| ACAGTTTATGAACATGCCAT+AGG | - | chr1.2:68338173-68338192 | MS.gene60516:intron | 35.0% | |
| ACATAAAATCATCACCGCTA+GGG | + | chr1.2:68338768-68338787 | None:intergenic | 35.0% | |
| ACTTACAACCTCAGTAGAAT+GGG | - | chr1.2:68341845-68341864 | MS.gene60516:intron | 35.0% | |
| AGATATGACAAACATGGCAT+GGG | + | chr1.2:68341127-68341146 | None:intergenic | 35.0% | |
| AGCTCAAGATTATACAAGCA+AGG | + | chr1.2:68341490-68341509 | None:intergenic | 35.0% | |
| ATTGAAGAGGAATACCAAAG+GGG | + | chr1.2:68337828-68337847 | None:intergenic | 35.0% | |
| CTCAGCTTCTAACACAAAAT+TGG | + | chr1.2:68338716-68338735 | None:intergenic | 35.0% | |
| CTCCATAGTCTAATTATTGC+AGG | + | chr1.2:68340010-68340029 | None:intergenic | 35.0% | |
| GAATTGAAGAGGAATACCAA+AGG | + | chr1.2:68337830-68337849 | None:intergenic | 35.0% | |
| GGAACCAAACCATTTCTATT+TGG | - | chr1.2:68340394-68340413 | MS.gene60516:intron | 35.0% | |
| GTAGACAAAGAAACGGTTAT+AGG | + | chr1.2:68337803-68337822 | None:intergenic | 35.0% | |
| TACTTACAACCTCAGTAGAA+TGG | - | chr1.2:68341844-68341863 | MS.gene60516:intron | 35.0% | |
| TAGAAAGTCTGCTTCAGTAA+TGG | - | chr1.2:68340613-68340632 | MS.gene60516:intron | 35.0% | |
| TAGCTTATGATACAGCCTAT+AGG | + | chr1.2:68338239-68338258 | None:intergenic | 35.0% | |
| TAGTCTAATTATTGCAGGCA+CGG | + | chr1.2:68340005-68340024 | None:intergenic | 35.0% | |
| TATGTTATAAGCTTGCGGTT+TGG | - | chr1.2:68339419-68339438 | MS.gene60516:intron | 35.0% | |
| TCAACATCAATTCAGATGGA+TGG | - | chr1.2:68342023-68342042 | MS.gene60516:intron | 35.0% | |
| TCGTGTTTAATCACCTTCAA+TGG | + | chr1.2:68342130-68342149 | None:intergenic | 35.0% | |
| TGCCTGCAATAATTAGACTA+TGG | - | chr1.2:68340005-68340024 | MS.gene60516:intron | 35.0% | |
| TGTACCTAAAATCCATATCC+CGG | + | chr1.2:68339868-68339887 | None:intergenic | 35.0% | |
| TGTATTGCCAAAACTGTGAA+GGG | - | chr1.2:68340750-68340769 | MS.gene60516:CDS | 35.0% | |
| TTGCAGTTGTATACAGACTA+TGG | - | chr1.2:68337990-68338009 | MS.gene60516:intron | 35.0% | |
| TTGGGCTGTTCAATTTGATA+TGG | - | chr1.2:68341166-68341185 | MS.gene60516:intron | 35.0% | |
| TTGTATTGCCAAAACTGTGA+AGG | - | chr1.2:68340749-68340768 | MS.gene60516:CDS | 35.0% | |
| TTTATGTGCTCTTTGAGCAA+TGG | - | chr1.2:68338781-68338800 | MS.gene60516:intron | 35.0% | |
| ! | ACCAAGAGAACTGGTTTATT+AGG | + | chr1.2:68341782-68341801 | None:intergenic | 35.0% |
| ! | AGAACTAAGGCTTCTCTTTT+GGG | - | chr1.2:68341148-68341167 | MS.gene60516:intron | 35.0% |
| ! | AGCTTCTTTTCTAATAGCCA+TGG | - | chr1.2:68338816-68338835 | MS.gene60516:intron | 35.0% |
| ! | ATATTTTGCCTCGAGTTCTA+TGG | - | chr1.2:68339487-68339506 | MS.gene60516:intron | 35.0% |
| ! | ATGTGGTTAGTTACGTTTCA+TGG | + | chr1.2:68342335-68342354 | None:intergenic | 35.0% |
| ! | CAATTTTGTGTTAGAAGCTG+AGG | - | chr1.2:68338714-68338733 | MS.gene60516:CDS | 35.0% |
| ! | CATTCATGAACACACTTTTG+GGG | - | chr1.2:68341691-68341710 | MS.gene60516:intron | 35.0% |
| ! | CTATAAGCTGTAAGGTATTC+TGG | - | chr1.2:68338353-68338372 | MS.gene60516:intron | 35.0% |
| ! | GCTTCTTTTCTAATAGCCAT+GGG | - | chr1.2:68338817-68338836 | MS.gene60516:intron | 35.0% |
| ! | TGTTCTTATTTCCTTGAGCT+AGG | - | chr1.2:68339046-68339065 | MS.gene60516:intron | 35.0% |
| !! | ACAACTAGGTTGAGATTTTC+GGG | + | chr1.2:68337719-68337738 | None:intergenic | 35.0% |
| !! | CTCATCATTGGTTTAAACCT+TGG | + | chr1.2:68342595-68342614 | None:intergenic | 35.0% |
| !! | GTTCTGAGATATGACAAACA+TGG | + | chr1.2:68341133-68341152 | None:intergenic | 35.0% |
| !! | TAATCAAAAAGGTACCAGTG+TGG | + | chr1.2:68341663-68341682 | None:intergenic | 35.0% |
| !!! | CAGATATACTTGGTGCTTTT+AGG | - | chr1.2:68342475-68342494 | MS.gene60516:intron | 35.0% |
| !!! | TTATGTCGATTTTCCAAGGA+TGG | - | chr1.2:68340373-68340392 | MS.gene60516:intron | 35.0% |
| AAACATGAAACTGTTGCCCA+AGG | - | chr1.2:68339569-68339588 | MS.gene60516:intron | 40.0% | |
| AAGTCATTTGGATAGCAAGG+TGG | - | chr1.2:68340719-68340738 | MS.gene60516:CDS | 40.0% | |
| AGAAACGGTTATAGGGTCAA+AGG | + | chr1.2:68337795-68337814 | None:intergenic | 40.0% | |
| AGAATCTGGAAGGTTGAAGA+CGG | - | chr1.2:68340187-68340206 | MS.gene60516:intron | 40.0% | |
| AGGGGAAGTAGACAAAGAAA+CGG | + | chr1.2:68337810-68337829 | None:intergenic | 40.0% | |
| ATAAGTCTCTTACAGCGGTT+TGG | - | chr1.2:68340549-68340568 | MS.gene60516:intron | 40.0% | |
| ATACAGACTATGGCCATGTT+TGG | - | chr1.2:68338000-68338019 | MS.gene60516:intron | 40.0% | |
| ATTTGGTACAACTGAGCATG+CGG | + | chr1.2:68339009-68339028 | None:intergenic | 40.0% | |
| CAATGTCATCAAGGTTTCAC+AGG | + | chr1.2:68340083-68340102 | None:intergenic | 40.0% | |
| CACATAAAATCATCACCGCT+AGG | + | chr1.2:68338769-68338788 | None:intergenic | 40.0% | |
| CGAGAACTCTGATTCATTCT+GGG | - | chr1.2:68342537-68342556 | MS.gene60516:CDS | 40.0% | |
| CTACTACTTTAAGTAACGGC+AGG | - | chr1.2:68338930-68338949 | MS.gene60516:intron | 40.0% | |
| CTAGCTTCAACTTCTACTGA+TGG | - | chr1.2:68340157-68340176 | MS.gene60516:intron | 40.0% | |
| CTTACAACCTCAGTAGAATG+GGG | - | chr1.2:68341846-68341865 | MS.gene60516:intron | 40.0% | |
| CTTCTGTCTTTAACACGTGT+AGG | - | chr1.2:68339769-68339788 | MS.gene60516:intron | 40.0% | |
| GAGAACTCTGATTCATTCTG+GGG | - | chr1.2:68342538-68342557 | MS.gene60516:CDS | 40.0% | |
| GAGATATGACAAACATGGCA+TGG | + | chr1.2:68341128-68341147 | None:intergenic | 40.0% | |
| GAGATTATTAGGAGAGCCTA+TGG | + | chr1.2:68338192-68338211 | None:intergenic | 40.0% | |
| GCATATGCATCACTCTACAT+AGG | + | chr1.2:68338492-68338511 | None:intergenic | 40.0% | |
| GCCTAATAAACCAGTTCTCT+TGG | - | chr1.2:68341778-68341797 | MS.gene60516:intron | 40.0% | |
| GGATCATGTAATTGGAAGTG+TGG | - | chr1.2:68338644-68338663 | MS.gene60516:intron | 40.0% | |
| GGCTGTATCATAAGCTATTC+TGG | - | chr1.2:68338242-68338261 | MS.gene60516:intron | 40.0% | |
| GGTCAGTATCAATGTCATCA+AGG | + | chr1.2:68340092-68340111 | None:intergenic | 40.0% | |
| GTAGATGACTGATAAGCTAG+CGG | - | chr1.2:68339114-68339133 | MS.gene60516:intron | 40.0% | |
| TAAACCAGTTCTCTTGGTCT+TGG | - | chr1.2:68341784-68341803 | MS.gene60516:intron | 40.0% | |
| TAAGTCTCTTACAGCGGTTT+GGG | - | chr1.2:68340550-68340569 | MS.gene60516:intron | 40.0% | |
| TATAGCAAGAGACTACACCT+CGG | - | chr1.2:68341590-68341609 | MS.gene60516:intron | 40.0% | |
| TCAACCTAGTTGTTCTTGGA+AGG | - | chr1.2:68337726-68337745 | MS.gene60516:CDS | 40.0% | |
| TCCAAAATTATGCGCATGCT+AGG | + | chr1.2:68339821-68339840 | None:intergenic | 40.0% | |
| TCGAGAACTCTGATTCATTC+TGG | - | chr1.2:68342536-68342555 | MS.gene60516:CDS | 40.0% | |
| TGCAGATTGTTTGAGCTCTA+TGG | - | chr1.2:68339537-68339556 | MS.gene60516:intron | 40.0% | |
| TGGATTTCTGTCCTAGTGAA+AGG | - | chr1.2:68341630-68341649 | MS.gene60516:intron | 40.0% | |
| TGTCTTTAACACGTGTAGGA+TGG | - | chr1.2:68339773-68339792 | MS.gene60516:intron | 40.0% | |
| TTCCACCAACAATCTTGTTC+AGG | + | chr1.2:68338569-68338588 | None:intergenic | 40.0% | |
| TTCCTGAACAAGATTGTTGG+TGG | - | chr1.2:68338564-68338583 | MS.gene60516:intron | 40.0% | |
| TTCTTTGTCTACTTCCCCTT+TGG | - | chr1.2:68337811-68337830 | MS.gene60516:CDS | 40.0% | |
| TTTGTGTTAGAAGCTGAGGA+AGG | - | chr1.2:68338718-68338737 | MS.gene60516:CDS | 40.0% | |
| ! | AAAAGCACACAAATCTGTCC+GGG | - | chr1.2:68339847-68339866 | MS.gene60516:intron | 40.0% |
| ! | CAAAAGCACACAAATCTGTC+CGG | - | chr1.2:68339846-68339865 | MS.gene60516:intron | 40.0% |
| ! | CAGAACTAAGGCTTCTCTTT+TGG | - | chr1.2:68341147-68341166 | MS.gene60516:intron | 40.0% |
| ! | GAGAAAATCTGAAGCAAAGC+AGG | + | chr1.2:68337773-68337792 | None:intergenic | 40.0% |
| ! | GGTGTAGTCTCTTGCTATAA+TGG | + | chr1.2:68341589-68341608 | None:intergenic | 40.0% |
| ! | GGTTAGTTACGTTTCATGGA+TGG | + | chr1.2:68342331-68342350 | None:intergenic | 40.0% |
| ! | TCATTCTGGGGATTTCCAAT+GGG | - | chr1.2:68342550-68342569 | MS.gene60516:CDS | 40.0% |
| ! | TGGTTGGTGCAATTTACATG+TGG | + | chr1.2:68342352-68342371 | None:intergenic | 40.0% |
| ! | TTCATTCTGGGGATTTCCAA+TGG | - | chr1.2:68342549-68342568 | MS.gene60516:CDS | 40.0% |
| ! | TTCTTCACCCTTCACAGTTT+TGG | + | chr1.2:68340760-68340779 | None:intergenic | 40.0% |
| !! | AAATGGTTTGGTTCCATCCT+TGG | + | chr1.2:68340389-68340408 | None:intergenic | 40.0% |
| !! | GATCTAAATTTGCTGCTGGT+GGG | - | chr1.2:68339649-68339668 | MS.gene60516:intron | 40.0% |
| !! | GATGGATCTAAATTTGCTGC+TGG | - | chr1.2:68339645-68339664 | MS.gene60516:intron | 40.0% |
| AAAACCAACCAGCTAGACCA+AGG | - | chr1.2:68342575-68342594 | MS.gene60516:CDS | 45.0% | |
| AAGGAACTAACCCCTCTACA+GGG | - | chr1.2:68339588-68339607 | MS.gene60516:intron | 45.0% | |
| AAGTATATCTGCCACTCTGC+AGG | + | chr1.2:68342466-68342485 | None:intergenic | 45.0% | |
| AATGATGCTGGATCACCTCA+GGG | - | chr1.2:68337662-68337681 | MS.gene60516:CDS | 45.0% | |
| ACACAAATCTGTCCGGGATA+TGG | - | chr1.2:68339853-68339872 | MS.gene60516:intron | 45.0% | |
| AGAGCAAGGTTTCAATCCCA+TGG | + | chr1.2:68338836-68338855 | None:intergenic | 45.0% | |
| AGGACAAGAATTTCCACGCT+TGG | + | chr1.2:68337753-68337772 | None:intergenic | 45.0% | |
| AGGGGATAAGTCTCTTACAG+CGG | - | chr1.2:68340544-68340563 | MS.gene60516:intron | 45.0% | |
| ATAGCCAAGACCAAGAGAAC+TGG | + | chr1.2:68341791-68341810 | None:intergenic | 45.0% | |
| ATCACGTGATGTGAGGATAG+CGG | + | chr1.2:68342169-68342188 | None:intergenic | 45.0% | |
| ATGTTGCGATAGTTGTACCG+AGG | + | chr1.2:68341610-68341629 | None:intergenic | 45.0% | |
| CACTCTACATAGGACCTGTT+TGG | + | chr1.2:68338482-68338501 | None:intergenic | 45.0% | |
| CGGTACAACTATCGCAACAT+TGG | - | chr1.2:68341610-68341629 | MS.gene60516:intron | 45.0% | |
| CTATTTGGCGCCGTTCAAAA+AGG | - | chr1.2:68340409-68340428 | MS.gene60516:intron | 45.0% | |
| GACACCTCAGAATTATGGAG+TGG | - | chr1.2:68339795-68339814 | MS.gene60516:intron | 45.0% | |
| GATTGAGGGTCTCTCATCAT+TGG | + | chr1.2:68342607-68342626 | None:intergenic | 45.0% | |
| GGAACAAAATAGGGCACAAG+AGG | - | chr1.2:68340585-68340604 | MS.gene60516:intron | 45.0% | |
| GGATGGACACCTCAGAATTA+TGG | - | chr1.2:68339790-68339809 | MS.gene60516:intron | 45.0% | |
| GGCGCCAAATAGAAATGGTT+TGG | + | chr1.2:68340401-68340420 | None:intergenic | 45.0% | |
| GGTTTAAACCTTGGTCTAGC+TGG | + | chr1.2:68342586-68342605 | None:intergenic | 45.0% | |
| TAAACCTTGGTCTAGCTGGT+TGG | + | chr1.2:68342582-68342601 | None:intergenic | 45.0% | |
| TAGGCCACTCCATAATTCTG+AGG | + | chr1.2:68339802-68339821 | None:intergenic | 45.0% | |
| TATGGATGTGTGCGAGCATA+TGG | + | chr1.2:68341925-68341944 | None:intergenic | 45.0% | |
| TCATACACTCTCCTAGCTCA+AGG | + | chr1.2:68339060-68339079 | None:intergenic | 45.0% | |
| TGAACGGCGCCAAATAGAAA+TGG | + | chr1.2:68340406-68340425 | None:intergenic | 45.0% | |
| TGCAGAGTGGCAGATATACT+TGG | - | chr1.2:68342465-68342484 | MS.gene60516:intron | 45.0% | |
| TGGACCTTCCAAGAACAACT+AGG | + | chr1.2:68337733-68337752 | None:intergenic | 45.0% | |
| TTACTTGCGGGTCATGGATT+CGG | - | chr1.2:68337690-68337709 | MS.gene60516:CDS | 45.0% | |
| TTGTTGTGAAACCTGCAGAG+TGG | - | chr1.2:68342452-68342471 | MS.gene60516:intron | 45.0% | |
| ! | ACTGATAAGCTAGCGGATAG+TGG | - | chr1.2:68339121-68339140 | MS.gene60516:intron | 45.0% |
| ! | CGGACAGATTTGTGTGCTTT+TGG | + | chr1.2:68339848-68339867 | None:intergenic | 45.0% |
| ! | CGGTTTGGGATATGAGTTCA+TGG | - | chr1.2:68340564-68340583 | MS.gene60516:intron | 45.0% |
| ! | CTGTCCGGGATATGGATTTT+AGG | - | chr1.2:68339861-68339880 | MS.gene60516:intron | 45.0% |
| ! | GCCTAGCATGCGCATAATTT+TGG | - | chr1.2:68339817-68339836 | MS.gene60516:intron | 45.0% |
| !! | GGATCTAAATTTGCTGCTGG+TGG | - | chr1.2:68339648-68339667 | MS.gene60516:intron | 45.0% |
| !! | TAAATTTGCTGCTGGTGGGT+CGG | - | chr1.2:68339653-68339672 | MS.gene60516:CDS | 45.0% |
| !! | TGTAGAGGGGTTAGTTCCTT+GGG | + | chr1.2:68339588-68339607 | None:intergenic | 45.0% |
| !!! | GCTGGTTGGTTTTTTCCCAT+TGG | + | chr1.2:68342568-68342587 | None:intergenic | 45.0% |
| !!! | AAATATCATATTTAATTTAT+TGG | - | chr1.2:68341260-68341279 | MS.gene60516:intron | 5.0% |
| !!! | AATATCATATTTAATTTATT+GGG | - | chr1.2:68341261-68341280 | MS.gene60516:intron | 5.0% |
| AGAAGCTGAGGAAGGTGATC+CGG | - | chr1.2:68338726-68338745 | MS.gene60516:CDS | 50.0% | |
| ATCCATGACCCGCAAGTAAC+CGG | + | chr1.2:68337689-68337708 | None:intergenic | 50.0% | |
| CAAGGAACTAACCCCTCTAC+AGG | - | chr1.2:68339587-68339606 | MS.gene60516:intron | 50.0% | |
| CAATGCTCCCCATTCTACTG+AGG | + | chr1.2:68341856-68341875 | None:intergenic | 50.0% | |
| CTAACCCCTCTACAGGGTAT+TGG | - | chr1.2:68339594-68339613 | MS.gene60516:intron | 50.0% | |
| CTGATGGTTCAGCGAGAATC+TGG | - | chr1.2:68340173-68340192 | MS.gene60516:intron | 50.0% | |
| GAATGATGCTGGATCACCTC+AGG | - | chr1.2:68337661-68337680 | MS.gene60516:CDS | 50.0% | |
| GGAACCAATACCCTGTAGAG+GGG | + | chr1.2:68339601-68339620 | None:intergenic | 50.0% | |
| GGGAACCAATACCCTGTAGA+GGG | + | chr1.2:68339602-68339621 | None:intergenic | 50.0% | |
| GTATTTCCCGTCGTGGCTAA+CGG | + | chr1.2:68340639-68340658 | None:intergenic | 50.0% | |
| TGGGAACCAATACCCTGTAG+AGG | + | chr1.2:68339603-68339622 | None:intergenic | 50.0% | |
| TGGTTCAGCGAGAATCTGGA+AGG | - | chr1.2:68340177-68340196 | MS.gene60516:intron | 50.0% | |
| ! | CTCAGTAGAATGGGGAGCAT+TGG | - | chr1.2:68341854-68341873 | MS.gene60516:intron | 50.0% |
| !! | CTGTAGAGGGGTTAGTTCCT+TGG | + | chr1.2:68339589-68339608 | None:intergenic | 50.0% |
| !! | GAGAAAGGTATTTCCCGTCG+TGG | + | chr1.2:68340646-68340665 | None:intergenic | 50.0% |
| GACCACTCTGTCTCGCAACT+CGG | - | chr1.2:68340219-68340238 | MS.gene60516:intron | 55.0% | |
| GCTATTGCTGTGCACCCTAG+CGG | - | chr1.2:68338751-68338770 | MS.gene60516:CDS | 55.0% | |
| GGGTGCACAGCAATAGCAAC+CGG | + | chr1.2:68338748-68338767 | None:intergenic | 55.0% | |
| GTAATGGCCGTTAGCCACGA+CGG | - | chr1.2:68340629-68340648 | MS.gene60516:intron | 55.0% | |
| GTTCTTGGAAGGTCCAAGCG+TGG | - | chr1.2:68337737-68337756 | MS.gene60516:CDS | 55.0% | |
| TAATGGCCGTTAGCCACGAC+GGG | - | chr1.2:68340630-68340649 | MS.gene60516:intron | 55.0% | |
| TACCGAGTTGCGAGACAGAG+TGG | + | chr1.2:68340224-68340243 | None:intergenic | 55.0% | |
| TTGCGAGACAGAGTGGTCAC+AGG | + | chr1.2:68340217-68340236 | None:intergenic | 55.0% | |
| CCTCAGGGTCCGGTTACTTG+CGG | - | chr1.2:68337677-68337696 | MS.gene60516:CDS | 60.0% | |
| CTCAGGGTCCGGTTACTTGC+GGG | - | chr1.2:68337678-68337697 | MS.gene60516:CDS | 60.0% | |
| GTCCGGTTACTTGCGGGTCA+TGG | - | chr1.2:68337684-68337703 | MS.gene60516:CDS | 60.0% | |
| TGCTGGATCACCTCAGGGTC+CGG | - | chr1.2:68337667-68337686 | MS.gene60516:CDS | 60.0% | |
| CCGCAAGTAACCGGACCCTG+AGG | + | chr1.2:68337680-68337699 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 68337656 | 68342660 | 68337656 | ID=MS.gene60516 |
| chr1.2 | mRNA | 68337656 | 68342660 | 68337656 | ID=MS.gene60516.t1;Parent=MS.gene60516 |
| chr1.2 | exon | 68342484 | 68342660 | 68342484 | ID=MS.gene60516.t1.exon1;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68342484 | 68342660 | 68342484 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68341504 | 68341604 | 68341504 | ID=MS.gene60516.t1.exon2;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68341504 | 68341604 | 68341504 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68340642 | 68340774 | 68340642 | ID=MS.gene60516.t1.exon3;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68340642 | 68340774 | 68340642 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68340434 | 68340525 | 68340434 | ID=MS.gene60516.t1.exon4;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68340434 | 68340525 | 68340434 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68340076 | 68340175 | 68340076 | ID=MS.gene60516.t1.exon5;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68340076 | 68340175 | 68340076 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68339886 | 68339958 | 68339886 | ID=MS.gene60516.t1.exon6;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68339886 | 68339958 | 68339886 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68339650 | 68339770 | 68339650 | ID=MS.gene60516.t1.exon7;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68339650 | 68339770 | 68339650 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68338665 | 68338784 | 68338665 | ID=MS.gene60516.t1.exon8;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68338665 | 68338784 | 68338665 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68338407 | 68338477 | 68338407 | ID=MS.gene60516.t1.exon9;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68338407 | 68338477 | 68338407 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| chr1.2 | exon | 68337656 | 68337846 | 68337656 | ID=MS.gene60516.t1.exon10;Parent=MS.gene60516.t1 |
| chr1.2 | CDS | 68337656 | 68337846 | 68337656 | ID=cds.MS.gene60516.t1;Parent=MS.gene60516.t1 |
| Gene Sequence |
| Protein sequence |
