Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61036.t1 | KEH29019.1 | 72 | 164 | 46 | 0 | 19 | 182 | 136 | 299 | 2.00E-61 | 246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61036.t1 | Q9MAA2 | 45.5 | 66 | 36 | 0 | 229 | 294 | 211 | 276 | 2.8e-11 | 70.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61036.t1 | A0A072UGY0 | 72.0 | 164 | 46 | 0 | 19 | 182 | 136 | 299 | 1.5e-61 | 246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene61036 | 0.814486 | 1.50E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene61036 | 0.804446 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61036.t1 | MTR_4g020630 | 62.887 | 194 | 70 | 2 | 18 | 210 | 135 | 327 | 7.76e-79 | 248 |
| MS.gene61036.t1 | MTR_8g463110 | 56.364 | 165 | 72 | 0 | 18 | 182 | 199 | 363 | 1.09e-62 | 209 |
| MS.gene61036.t1 | MTR_6g034215 | 51.538 | 130 | 63 | 0 | 10 | 139 | 195 | 324 | 1.96e-40 | 143 |
| MS.gene61036.t1 | MTR_7g113920 | 37.705 | 244 | 116 | 9 | 61 | 298 | 95 | 308 | 1.38e-34 | 128 |
| MS.gene61036.t1 | MTR_7g063500 | 60.000 | 85 | 34 | 0 | 79 | 163 | 38 | 122 | 1.88e-31 | 114 |
| MS.gene61036.t1 | MTR_5g069440 | 45.902 | 122 | 60 | 3 | 61 | 180 | 33 | 150 | 8.63e-27 | 103 |
| MS.gene61036.t1 | MTR_7g056813 | 56.471 | 85 | 35 | 1 | 79 | 163 | 8 | 90 | 5.60e-24 | 100 |
| MS.gene61036.t1 | MTR_3g044860 | 37.705 | 122 | 50 | 1 | 13 | 134 | 86 | 181 | 1.16e-21 | 92.8 |
| MS.gene61036.t1 | MTR_7g015270 | 53.750 | 80 | 33 | 2 | 134 | 213 | 99 | 174 | 3.46e-19 | 84.7 |
| MS.gene61036.t1 | MTR_1g051330 | 30.198 | 202 | 120 | 6 | 12 | 210 | 348 | 531 | 2.07e-18 | 85.9 |
| MS.gene61036.t1 | MTR_1g100687 | 37.624 | 101 | 63 | 0 | 13 | 113 | 132 | 232 | 5.85e-18 | 81.3 |
| MS.gene61036.t1 | MTR_2g063055 | 30.827 | 133 | 87 | 1 | 36 | 168 | 52 | 179 | 1.73e-17 | 79.0 |
| MS.gene61036.t1 | MTR_1g082360 | 46.377 | 69 | 35 | 1 | 229 | 295 | 207 | 275 | 1.37e-15 | 75.9 |
| MS.gene61036.t1 | MTR_7g033160 | 42.623 | 61 | 35 | 0 | 126 | 186 | 14 | 74 | 3.43e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61036.t1 | AT3G05170 | 27.083 | 240 | 139 | 9 | 61 | 294 | 67 | 276 | 2.34e-13 | 69.7 |
Find 67 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAAAGTGGACTTATTA+AGG | 0.286810 | 8.1:+38237055 | MS.gene61036:CDS |
| GAAAATAATGAATAGATTAT+TGG | 0.290150 | 8.1:+38233811 | MS.gene61036:CDS |
| TTATTGTAGGTGATTGAAAT+TGG | 0.318361 | 8.1:+38237002 | MS.gene61036:intron |
| TTCTGATCAGCTACCATATC+AGG | 0.328803 | 8.1:-38238003 | None:intergenic |
| ATGCACAACATTCGACTAAA+TGG | 0.332119 | 8.1:+38233752 | MS.gene61036:CDS |
| GAGCAAAGTTAAGTATGAAT+TGG | 0.377981 | 8.1:+38237031 | MS.gene61036:CDS |
| GGAGGCATGGTTTCATCAAT+TGG | 0.389123 | 8.1:+38232530 | None:intergenic |
| GAGAGGTTGTGACTGATTCA+TGG | 0.395229 | 8.1:+38233609 | MS.gene61036:CDS |
| TGGCTCAAGATGATGCATAT+TGG | 0.412539 | 8.1:+38233831 | MS.gene61036:CDS |
| TCAAGGGAGCCTTGCTGCCA+TGG | 0.424486 | 8.1:-38238035 | None:intergenic |
| ACTAGATCAATTAATACATC+AGG | 0.434372 | 8.1:+38232566 | MS.gene61036:CDS |
| TAATTGATCTAGTTCTCATA+TGG | 0.441951 | 8.1:-38232556 | None:intergenic |
| CAGATGAAGAACTGCTTAAG+TGG | 0.460851 | 8.1:+38237971 | MS.gene61036:CDS |
| ATCCCGCATACCTTGATCAT+TGG | 0.468462 | 8.1:-38233984 | None:intergenic |
| GAACAGCGGTTCAGAAGAAT+AGG | 0.471719 | 8.1:-38233515 | None:intergenic |
| AAACAAAATTTCTTCTCTTG+AGG | 0.471994 | 8.1:+38233940 | MS.gene61036:CDS |
| TGAGATCAAGAAATGCTTCA+AGG | 0.472093 | 8.1:-38238077 | None:intergenic |
| GTGGGGACTTTGAACATTCA+AGG | 0.472238 | 8.1:-38238052 | None:intergenic |
| GTCAAAGGGCAAAGGCTCAT+TGG | 0.479929 | 8.1:+38233855 | MS.gene61036:CDS |
| TGTGTGATGCAGTTTGGGAC+TGG | 0.480347 | 8.1:+38237919 | MS.gene61036:intron |
| CAAGAAATGCTTCAAGGCAG+TGG | 0.487042 | 8.1:-38238071 | None:intergenic |
| ATGATGCATATTGGCGTCAA+AGG | 0.491862 | 8.1:+38233840 | MS.gene61036:CDS |
| AGCTGCCTCCGCGCGTAAGA+AGG | 0.494035 | 8.1:+38233916 | MS.gene61036:CDS |
| CATAACAAAAGTTGCGGCAA+CGG | 0.516678 | 8.1:-38233556 | None:intergenic |
| AACAAGGTCACCAATGATCA+AGG | 0.523827 | 8.1:+38233974 | MS.gene61036:CDS |
| AAGAAATGCTTCAAGGCAGT+GGG | 0.528278 | 8.1:-38238070 | None:intergenic |
| AACGCGTGGCATATAGAACC+TGG | 0.528754 | 8.1:+38233581 | MS.gene61036:CDS |
| TATGAATTGGACAAGAAAAG+TGG | 0.537750 | 8.1:+38237044 | MS.gene61036:CDS |
| ATATGGTAGCTGATCAGAAA+TGG | 0.538142 | 8.1:+38238007 | MS.gene61036:CDS |
| TCTTCTCTTGAGGATAGCAC+AGG | 0.538817 | 8.1:+38233950 | MS.gene61036:CDS |
| TGATGCATATTGGCGTCAAA+GGG | 0.540441 | 8.1:+38233841 | MS.gene61036:CDS |
| CGGCAACGGAGATTAGAACT+TGG | 0.542309 | 8.1:-38233542 | None:intergenic |
| TAAACAACTTACAATAGATA+AGG | 0.543737 | 8.1:-38235078 | None:intergenic |
| TTGACATTGAAGAGTGTCGT+AGG | 0.545960 | 8.1:+38233726 | MS.gene61036:CDS |
| CAAGGGAGCCTTGCTGCCAT+GGG | 0.546859 | 8.1:-38238034 | None:intergenic |
| GCGCATGTGACATCAAATCA+TGG | 0.557491 | 8.1:+38233675 | MS.gene61036:CDS |
| TAGGTGATTGAAATTGGCAA+AGG | 0.557884 | 8.1:+38237008 | MS.gene61036:intron |
| TTGTATTACGGTCTCCGTCA+CGG | 0.563683 | 8.1:-38233880 | None:intergenic |
| AGATGAAGAACTGCTTAAGT+GGG | 0.564810 | 8.1:+38237972 | MS.gene61036:CDS |
| AGGTGATTGAAATTGGCAAA+GGG | 0.576496 | 8.1:+38237009 | MS.gene61036:intron |
| CATGCGCATGATGCTAGTCT+AGG | 0.578910 | 8.1:-38233659 | None:intergenic |
| TGGGGACTTTGAACATTCAA+GGG | 0.579415 | 8.1:-38238051 | None:intergenic |
| CGCATGATGCTAGTCTAGGA+AGG | 0.584288 | 8.1:-38233655 | None:intergenic |
| GTGATGCAGTTTGGGACTGG+TGG | 0.592908 | 8.1:+38237922 | MS.gene61036:intron |
| GTCACAACCTCTCGAAACCC+AGG | 0.601443 | 8.1:-38233599 | None:intergenic |
| TGACATTGAAGAGTGTCGTA+GGG | 0.608542 | 8.1:+38233727 | MS.gene61036:CDS |
| CAACTTACAATAGATAAGGT+AGG | 0.622194 | 8.1:-38235074 | None:intergenic |
| AACATTCGACTAAATGGTGT+CGG | 0.624480 | 8.1:+38233758 | MS.gene61036:CDS |
| TGAGGATAGCACAGGCAACA+AGG | 0.625748 | 8.1:+38233958 | MS.gene61036:CDS |
| GATCAGAAATGGTGTGCCCA+TGG | 0.629856 | 8.1:+38238018 | MS.gene61036:CDS |
| TATAGAACCTGGGTTTCGAG+AGG | 0.634769 | 8.1:+38233592 | MS.gene61036:CDS |
| CTTACAATAGATAAGGTAGG+AGG | 0.643117 | 8.1:-38235071 | None:intergenic |
| ATGGTGTGCCCATGGCAGCA+AGG | 0.643428 | 8.1:+38238026 | MS.gene61036:CDS |
| AGTCTCATTTACTAGAGGTG+AGG | 0.647057 | 8.1:+38233789 | MS.gene61036:CDS |
| CGTTCTCATAACAAAAGTTG+CGG | 0.647861 | 8.1:-38233562 | None:intergenic |
| TGATTCTGATGACGAGAGTG+TGG | 0.652927 | 8.1:+38238104 | MS.gene61036:CDS |
| GATGAAGAACTGCTTAAGTG+GGG | 0.656412 | 8.1:+38237973 | MS.gene61036:CDS |
| AAGGCTCATTGGTACCGTGA+CGG | 0.661198 | 8.1:+38233866 | MS.gene61036:CDS |
| GTTTACCTTCTTACGCGCGG+AGG | 0.662034 | 8.1:-38233921 | None:intergenic |
| ATATTGGCGTCAAAGGGCAA+AGG | 0.662212 | 8.1:+38233847 | MS.gene61036:CDS |
| ATGAAGAACTGCTTAAGTGG+GGG | 0.668914 | 8.1:+38237974 | MS.gene61036:CDS |
| TTTGTTTACCTTCTTACGCG+CGG | 0.669996 | 8.1:-38233924 | None:intergenic |
| TAATCAGTCTCATTTACTAG+AGG | 0.675461 | 8.1:+38233784 | MS.gene61036:CDS |
| ACGCGTGGCATATAGAACCT+GGG | 0.680376 | 8.1:+38233582 | MS.gene61036:CDS |
| TAGAACTTGGTATAGAACAG+CGG | 0.695212 | 8.1:-38233529 | None:intergenic |
| AGAAATGCTTCAAGGCAGTG+GGG | 0.713932 | 8.1:-38238069 | None:intergenic |
| GACTGGTGGAGAGTACAACG+TGG | 0.821720 | 8.1:+38237936 | MS.gene61036:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATAATTAAATAAAA+AGG | - | chr8.1:38234204-38234223 | None:intergenic | 0.0% |
| !! | AAAATAATTAAATAAAAAGG+AGG | - | chr8.1:38234201-38234220 | None:intergenic | 10.0% |
| !! | AAATAATTAAATAAAAAGGA+GGG | - | chr8.1:38234200-38234219 | None:intergenic | 10.0% |
| !! | AATTTAATAGAATTTGATAA+TGG | - | chr8.1:38237607-38237626 | None:intergenic | 10.0% |
| !! | TATTATTGAATAATAATGTT+TGG | - | chr8.1:38237458-38237477 | None:intergenic | 10.0% |
| !! | TTAAAAAATTAGGATTTATA+TGG | + | chr8.1:38237381-38237400 | MS.gene61036:intron | 10.0% |
| !!! | ATAAAATAAATATTAAGTTG+TGG | + | chr8.1:38234347-38234366 | MS.gene61036:intron | 10.0% |
| !!! | TAAAATAAATATTAAGTTGT+GGG | + | chr8.1:38234348-38234367 | MS.gene61036:intron | 10.0% |
| !!! | TTTTAATAATTAAAAGAGAA+AGG | - | chr8.1:38235644-38235663 | None:intergenic | 10.0% |
| !! | GAAAATAATGAATAGATTAT+TGG | + | chr8.1:38233811-38233830 | MS.gene61036:CDS | 15.0% |
| !! | TAATAAACAAGATAATAAAC+AGG | - | chr8.1:38237489-38237508 | None:intergenic | 15.0% |
| !! | TCAAGTAACATTATTTATTT+AGG | - | chr8.1:38235194-38235213 | None:intergenic | 15.0% |
| !! | TTTCTTCTTGTTAAAAAATT+AGG | + | chr8.1:38237371-38237390 | MS.gene61036:intron | 15.0% |
| !!! | AAAATAAATATTAAGTTGTG+GGG | + | chr8.1:38234349-38234368 | MS.gene61036:intron | 15.0% |
| !!! | AAAATATACATTTTACATCA+TGG | + | chr8.1:38234388-38234407 | MS.gene61036:intron | 15.0% |
| !!! | AAATATACATTTTACATCAT+GGG | + | chr8.1:38234389-38234408 | MS.gene61036:intron | 15.0% |
| !!! | ACAATTATTTTCATAAATAC+AGG | + | chr8.1:38236749-38236768 | MS.gene61036:intron | 15.0% |
| !!! | CATGAAAATATTTTGTATTA+CGG | - | chr8.1:38233895-38233914 | None:intergenic | 15.0% |
| !!! | GTTATATTTTGATTTTGATT+TGG | + | chr8.1:38234947-38234966 | MS.gene61036:intron | 15.0% |
| !!! | TCAAATTTGAATCTAATTTT+GGG | + | chr8.1:38234917-38234936 | MS.gene61036:intron | 15.0% |
| !!! | TGGTTAATTTTATTAATTCT+GGG | + | chr8.1:38235136-38235155 | MS.gene61036:intron | 15.0% |
| !! | AACGATTGAAAAGTTATAAT+TGG | - | chr8.1:38237098-38237117 | None:intergenic | 20.0% |
| !! | ACGATTGAAAAGTTATAATT+GGG | - | chr8.1:38237097-38237116 | None:intergenic | 20.0% |
| !! | AGGCTAATATTTGTATATAT+TGG | + | chr8.1:38235409-38235428 | MS.gene61036:intron | 20.0% |
| !! | ATATAAAGGTCATTTCTTAT+TGG | + | chr8.1:38237246-38237265 | MS.gene61036:intron | 20.0% |
| !! | ATATATCATTTCCTAATGTA+GGG | + | chr8.1:38235596-38235615 | MS.gene61036:intron | 20.0% |
| !! | CAGAATTAATAAAATTAACC+AGG | - | chr8.1:38235137-38235156 | None:intergenic | 20.0% |
| !! | CCTAATTAATAAAATTGGAA+CGG | + | chr8.1:38235462-38235481 | MS.gene61036:intron | 20.0% |
| !! | TAAACAACTTACAATAGATA+AGG | - | chr8.1:38235081-38235100 | None:intergenic | 20.0% |
| !! | TATATATCATTTCCTAATGT+AGG | + | chr8.1:38235595-38235614 | MS.gene61036:intron | 20.0% |
| !! | TATTGAATAATAATGTTTGG+TGG | - | chr8.1:38237455-38237474 | None:intergenic | 20.0% |
| !! | TTAGGCCTAATTAATAAAAT+TGG | + | chr8.1:38235457-38235476 | MS.gene61036:intron | 20.0% |
| !!! | AAATGAATCAACCATATTTT+CGG | - | chr8.1:38237135-38237154 | None:intergenic | 20.0% |
| !!! | AGAAATTCTATGATTTTGTT+TGG | - | chr8.1:38237535-38237554 | None:intergenic | 20.0% |
| !!! | ATAAAGGTCGTTTATTTTAA+GGG | + | chr8.1:38237166-38237185 | MS.gene61036:intron | 20.0% |
| !!! | CAGATTTAAAATATCTCATT+CGG | + | chr8.1:38232892-38232911 | MS.gene61036:intron | 20.0% |
| !!! | CTGGTTAATTTTATTAATTC+TGG | + | chr8.1:38235135-38235154 | MS.gene61036:intron | 20.0% |
| !!! | GTCAAATTTGAATCTAATTT+TGG | + | chr8.1:38234916-38234935 | MS.gene61036:intron | 20.0% |
| !!! | TAATTCTAGAAAATAAGTCT+TGG | - | chr8.1:38234014-38234033 | None:intergenic | 20.0% |
| !!! | TATAAAGGTCGTTTATTTTA+AGG | + | chr8.1:38237165-38237184 | MS.gene61036:intron | 20.0% |
| !!! | TATTTGATTTACTAATTACC+TGG | + | chr8.1:38235116-38235135 | MS.gene61036:intron | 20.0% |
| !!! | TCTTGTTTATTATTCTTACT+TGG | + | chr8.1:38237497-38237516 | MS.gene61036:intron | 20.0% |
| !!! | TCTTTTTTTATTTTCCTTGT+CGG | + | chr8.1:38236807-38236826 | MS.gene61036:intron | 20.0% |
| !!! | TTAAGATTTTCTATTGTAGT+TGG | + | chr8.1:38235271-38235290 | MS.gene61036:intron | 20.0% |
| !!! | TTTTCTTAAATCTATATGGA+TGG | + | chr8.1:38237741-38237760 | MS.gene61036:intron | 20.0% |
| ! | AAACAAAATTTCTTCTCTTG+AGG | + | chr8.1:38233940-38233959 | MS.gene61036:CDS | 25.0% |
| ! | AAAGGGAATTATGTTATTGT+AGG | + | chr8.1:38236989-38237008 | MS.gene61036:intron | 25.0% |
| ! | ACAATGAGAAATTAACAACA+AGG | - | chr8.1:38236681-38236700 | None:intergenic | 25.0% |
| ! | ACTAGATCAATTAATACATC+AGG | + | chr8.1:38232566-38232585 | MS.gene61036:CDS | 25.0% |
| ! | ATATCCTACATATGTTAACT+TGG | + | chr8.1:38236165-38236184 | MS.gene61036:intron | 25.0% |
| ! | ATATTTAGTGTGTAGTAGTT+GGG | + | chr8.1:38236291-38236310 | MS.gene61036:intron | 25.0% |
| ! | ATTTATTTAGGCCATGAATA+TGG | - | chr8.1:38235182-38235201 | None:intergenic | 25.0% |
| ! | CAGAAAATTCAACAGTAATA+TGG | - | chr8.1:38233100-38233119 | None:intergenic | 25.0% |
| ! | CATTTGATGGGAAAATATAA+AGG | + | chr8.1:38237150-38237169 | MS.gene61036:intron | 25.0% |
| ! | GACAAGAAACAAACTTTATT+GGG | - | chr8.1:38235348-38235367 | None:intergenic | 25.0% |
| ! | TAGGATTTATATGGTATTTG+AGG | + | chr8.1:38237390-38237409 | MS.gene61036:intron | 25.0% |
| ! | TATATTAACCTACACATTGT+AGG | + | chr8.1:38237280-38237299 | MS.gene61036:intron | 25.0% |
| ! | TGACAAGAAACAAACTTTAT+TGG | - | chr8.1:38235349-38235368 | None:intergenic | 25.0% |
| ! | TTAAACTAATGTAATGCAGA+GGG | + | chr8.1:38237680-38237699 | MS.gene61036:intron | 25.0% |
| ! | TTAATGTTATGCTTGAAGAA+AGG | + | chr8.1:38232748-38232767 | MS.gene61036:intron | 25.0% |
| ! | TTATTAATTAGGCCTAATCA+AGG | - | chr8.1:38235454-38235473 | None:intergenic | 25.0% |
| ! | TTATTAGGCTATATACATGT+TGG | - | chr8.1:38236566-38236585 | None:intergenic | 25.0% |
| ! | TTATTGTAGGTGATTGAAAT+TGG | + | chr8.1:38237002-38237021 | MS.gene61036:intron | 25.0% |
| ! | TTTCTTTCACAAAGATATGT+GGG | + | chr8.1:38235310-38235329 | MS.gene61036:intron | 25.0% |
| !! | AATATGGTTGATTCATTTGA+TGG | + | chr8.1:38237137-38237156 | MS.gene61036:intron | 25.0% |
| !! | ATATGGTTGATTCATTTGAT+GGG | + | chr8.1:38237138-38237157 | MS.gene61036:intron | 25.0% |
| !! | CAGGTTTTCTTAAATCTATA+TGG | + | chr8.1:38237737-38237756 | MS.gene61036:intron | 25.0% |
| !! | CCGTTCCAATTTTATTAATT+AGG | - | chr8.1:38235465-38235484 | None:intergenic | 25.0% |
| !! | GAAGACTTTTAAATTTCTCA+TGG | + | chr8.1:38235212-38235231 | MS.gene61036:intron | 25.0% |
| !! | GAAGAGCTTCAATTTTATTA+CGG | - | chr8.1:38232962-38232981 | None:intergenic | 25.0% |
| !! | TAAAGTTTGTTTCTTGTCAA+TGG | + | chr8.1:38235350-38235369 | MS.gene61036:intron | 25.0% |
| !! | TAACATCTTTGTGCTATTAA+TGG | + | chr8.1:38236963-38236982 | MS.gene61036:intron | 25.0% |
| !! | TTTGAACTTCTCAACAATTT+TGG | + | chr8.1:38237883-38237902 | MS.gene61036:intron | 25.0% |
| !!! | CGAATGAGATATTTTAAATC+TGG | - | chr8.1:38232894-38232913 | None:intergenic | 25.0% |
| !!! | CTTTTTTTATTTTCCTTGTC+GGG | + | chr8.1:38236808-38236827 | MS.gene61036:intron | 25.0% |
| !!! | TAATTGATCTAGTTCTCATA+TGG | - | chr8.1:38232559-38232578 | None:intergenic | 25.0% |
| !!! | TAGAATTTGATAATGGTTGT+TGG | - | chr8.1:38237600-38237619 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTTTCCTTGTCG+GGG | + | chr8.1:38236809-38236828 | MS.gene61036:intron | 25.0% |
| AAACGAAGCCTTAATAAATG+TGG | + | chr8.1:38236921-38236940 | MS.gene61036:intron | 30.0% | |
| AATACAGTCAACAGAAAAAC+AGG | - | chr8.1:38233006-38233025 | None:intergenic | 30.0% | |
| AATCTGATAATTGTGTCACA+TGG | + | chr8.1:38237808-38237827 | MS.gene61036:intron | 30.0% | |
| ACAAAGAAGGAAAAGGAAAA+TGG | - | chr8.1:38234661-38234680 | None:intergenic | 30.0% | |
| ACACATTGATATAACACATC+AGG | + | chr8.1:38232660-38232679 | MS.gene61036:intron | 30.0% | |
| ACAGAGACATTTGATATGTT+GGG | + | chr8.1:38235836-38235855 | MS.gene61036:intron | 30.0% | |
| AGATATGTGGGACAAATATA+TGG | + | chr8.1:38235322-38235341 | MS.gene61036:intron | 30.0% | |
| AGATGAGAGAAAAGTGAAAA+GGG | - | chr8.1:38234722-38234741 | None:intergenic | 30.0% | |
| AGGAGTGATATATATGTTAG+CGG | + | chr8.1:38235707-38235726 | MS.gene61036:intron | 30.0% | |
| ATATTTAGTGTGTAGTAGCT+GGG | + | chr8.1:38235881-38235900 | MS.gene61036:intron | 30.0% | |
| ATCAGATTCAAATCGTTTGA+AGG | - | chr8.1:38237796-38237815 | None:intergenic | 30.0% | |
| ATCTGATAATTGTGTCACAT+GGG | + | chr8.1:38237809-38237828 | MS.gene61036:intron | 30.0% | |
| ATTGAATACCTACAATGTGT+AGG | - | chr8.1:38237291-38237310 | None:intergenic | 30.0% | |
| ATTTGAGGACACTTTCATTT+AGG | + | chr8.1:38237405-38237424 | MS.gene61036:intron | 30.0% | |
| ATTTGGCAGAATTGTAGAAA+TGG | - | chr8.1:38237209-38237228 | None:intergenic | 30.0% | |
| CAAACCATTATATCAATGTG+TGG | - | chr8.1:38232715-38232734 | None:intergenic | 30.0% | |
| CAAAGTTAGATGCATTAACT+TGG | + | chr8.1:38235755-38235774 | MS.gene61036:intron | 30.0% | |
| CAACTTACAATAGATAAGGT+AGG | - | chr8.1:38235077-38235096 | None:intergenic | 30.0% | |
| CAAGTTAATGCATCTAACTT+TGG | - | chr8.1:38235757-38235776 | None:intergenic | 30.0% | |
| CAATCTTTGATCACGTTATT+AGG | - | chr8.1:38236581-38236600 | None:intergenic | 30.0% | |
| CACACATTGATATAATGGTT+TGG | + | chr8.1:38232713-38232732 | MS.gene61036:intron | 30.0% | |
| CATATTTAGTGTGTAGTAGT+TGG | + | chr8.1:38236290-38236309 | MS.gene61036:intron | 30.0% | |
| CATTATTCCAAAACTCAGAA+GGG | - | chr8.1:38236862-38236881 | None:intergenic | 30.0% | |
| CCTCTAACATAGAATGAAAA+TGG | - | chr8.1:38235690-38235709 | None:intergenic | 30.0% | |
| CTAACCAAGTTAACATATGT+AGG | - | chr8.1:38236172-38236191 | None:intergenic | 30.0% | |
| CTTAAACTAATGTAATGCAG+AGG | + | chr8.1:38237679-38237698 | MS.gene61036:intron | 30.0% | |
| CTTTCTTTCACAAAGATATG+TGG | + | chr8.1:38235309-38235328 | MS.gene61036:intron | 30.0% | |
| GAGAAATTAACAACAAGGAT+AGG | - | chr8.1:38236676-38236695 | None:intergenic | 30.0% | |
| GAGCAAAGTTAAGTATGAAT+TGG | + | chr8.1:38237031-38237050 | MS.gene61036:CDS | 30.0% | |
| GATTACATACAAGATGTCAA+TGG | + | chr8.1:38234434-38234453 | MS.gene61036:intron | 30.0% | |
| GTAACATTAACACCTTGATT+AGG | + | chr8.1:38235439-38235458 | MS.gene61036:intron | 30.0% | |
| GTACAACAAATGAGTGTTAT+CGG | + | chr8.1:38232831-38232850 | MS.gene61036:intron | 30.0% | |
| GTTTCTTGTCAATGGAAATT+GGG | + | chr8.1:38235358-38235377 | MS.gene61036:intron | 30.0% | |
| TAATCAGTCTCATTTACTAG+AGG | + | chr8.1:38233784-38233803 | MS.gene61036:CDS | 30.0% | |
| TATGAATTGGACAAGAAAAG+TGG | + | chr8.1:38237044-38237063 | MS.gene61036:CDS | 30.0% | |
| TCAGATTCAAATCGTTTGAA+GGG | - | chr8.1:38237795-38237814 | None:intergenic | 30.0% | |
| TGAGATCACCACATTTATTA+AGG | - | chr8.1:38236932-38236951 | None:intergenic | 30.0% | |
| TGATGTGTTATATCAATGTG+TGG | - | chr8.1:38232661-38232680 | None:intergenic | 30.0% | |
| TGTTTCTTGTCAATGGAAAT+TGG | + | chr8.1:38235357-38235376 | MS.gene61036:intron | 30.0% | |
| TTAACATATGTAGGATATGC+AGG | - | chr8.1:38236163-38236182 | None:intergenic | 30.0% | |
| TTATTAAGGCTTCGTTTAGT+TGG | - | chr8.1:38236918-38236937 | None:intergenic | 30.0% | |
| TTCATCTGATTCCGAAAATA+TGG | + | chr8.1:38237121-38237140 | MS.gene61036:intron | 30.0% | |
| TTGTGACGAGGAAAATATAA+AGG | + | chr8.1:38237232-38237251 | MS.gene61036:intron | 30.0% | |
| TTTCCTCGTCACAATTAATT+TGG | - | chr8.1:38237226-38237245 | None:intergenic | 30.0% | |
| TTTCTCTGTTTGAACTTTGA+AGG | + | chr8.1:38235389-38235408 | MS.gene61036:intron | 30.0% | |
| ! | AAAAGGGATCTCTAAGTTTT+GGG | - | chr8.1:38234706-38234725 | None:intergenic | 30.0% |
| ! | ATAAAGAGTTTTCACATCAG+TGG | + | chr8.1:38234524-38234543 | MS.gene61036:intron | 30.0% |
| ! | ATATGATTTGCGAAACCAAT+TGG | + | chr8.1:38237340-38237359 | MS.gene61036:intron | 30.0% |
| ! | ATTTTCATAAATACAGGACC+AGG | + | chr8.1:38236755-38236774 | MS.gene61036:intron | 30.0% |
| ! | CAAGAAAAGTGGACTTATTA+AGG | + | chr8.1:38237055-38237074 | MS.gene61036:CDS | 30.0% |
| ! | CCATTTTCATTCTATGTTAG+AGG | + | chr8.1:38235687-38235706 | MS.gene61036:intron | 30.0% |
| ! | CTACATATGTTAACTTGGTT+AGG | + | chr8.1:38236170-38236189 | MS.gene61036:intron | 30.0% |
| ! | GAATTTTCTGATTCTGCTAT+TGG | + | chr8.1:38233110-38233129 | MS.gene61036:intron | 30.0% |
| ! | GCTTATTAATGGTTTTCATC+AGG | + | chr8.1:38233307-38233326 | MS.gene61036:intron | 30.0% |
| ! | TAAAGAGTTTTCACATCAGT+GGG | + | chr8.1:38234525-38234544 | MS.gene61036:intron | 30.0% |
| ! | TAACATAGTTTTCACATCAG+CGG | + | chr8.1:38234472-38234491 | MS.gene61036:intron | 30.0% |
| ! | TGTGCTATTAATGGTGTAAA+GGG | + | chr8.1:38236972-38236991 | MS.gene61036:intron | 30.0% |
| ! | TTAGATGCATTAACTTGGTT+AGG | + | chr8.1:38235760-38235779 | MS.gene61036:intron | 30.0% |
| ! | TTGTGCTATTAATGGTGTAA+AGG | + | chr8.1:38236971-38236990 | MS.gene61036:intron | 30.0% |
| ! | TTTAAATCTGGAATTGCACT+CGG | - | chr8.1:38232882-38232901 | None:intergenic | 30.0% |
| !! | ATTGATATAATGGTTTGGTG+TGG | + | chr8.1:38232718-38232737 | MS.gene61036:intron | 30.0% |
| !! | ATTTCTGAGAAGTATCTAGA+TGG | + | chr8.1:38236617-38236636 | MS.gene61036:intron | 30.0% |
| !! | GAATCTAATTTTGGGAAAAC+AGG | + | chr8.1:38234925-38234944 | MS.gene61036:intron | 30.0% |
| !! | TGTTTTTCTGTTGACTGTAT+TGG | + | chr8.1:38233005-38233024 | MS.gene61036:intron | 30.0% |
| !! | TTGATAATGGTTGTTGGATA+AGG | - | chr8.1:38237594-38237613 | None:intergenic | 30.0% |
| !!! | ACAGTAGTTTTTTGTGCTTT+TGG | + | chr8.1:38236059-38236078 | MS.gene61036:intron | 30.0% |
| !!! | ATGTTTCAGCTGGATTTTTT+TGG | + | chr8.1:38235996-38236015 | MS.gene61036:intron | 30.0% |
| !!! | ATTGTAGTTGGTTTTCGAAA+GGG | + | chr8.1:38235283-38235302 | MS.gene61036:intron | 30.0% |
| !!! | TAAGTTTTGGGAAGAGTTTA+GGG | - | chr8.1:38234694-38234713 | None:intergenic | 30.0% |
| !!! | TATTGTAGTTGGTTTTCGAA+AGG | + | chr8.1:38235282-38235301 | MS.gene61036:intron | 30.0% |
| AAACCATTAATAAGCCACTG+AGG | - | chr8.1:38233302-38233321 | None:intergenic | 35.0% | |
| AAATTTCTCATGGTAGACAG+TGG | + | chr8.1:38235222-38235241 | MS.gene61036:intron | 35.0% | |
| AACAAATGAGTGTTATCGGT+TGG | + | chr8.1:38232835-38232854 | MS.gene61036:intron | 35.0% | |
| AACATTCGACTAAATGGTGT+CGG | + | chr8.1:38233758-38233777 | MS.gene61036:CDS | 35.0% | |
| AAGTCACCAAAAATACACCA+AGG | - | chr8.1:38233233-38233252 | None:intergenic | 35.0% | |
| AGAATTCCTCCTTTGTGAAA+TGG | - | chr8.1:38234123-38234142 | None:intergenic | 35.0% | |
| AGATGAAGAACTGCTTAAGT+GGG | + | chr8.1:38237972-38237991 | MS.gene61036:CDS | 35.0% | |
| AGGTGATTGAAATTGGCAAA+GGG | + | chr8.1:38237009-38237028 | MS.gene61036:intron | 35.0% | |
| AGTCACCAAAAATACACCAA+GGG | - | chr8.1:38233232-38233251 | None:intergenic | 35.0% | |
| AGTTATGTGTGATGCAGTTT+GGG | + | chr8.1:38237914-38237933 | MS.gene61036:intron | 35.0% | |
| ATAGCCTAGTTAACATATGC+AGG | - | chr8.1:38236524-38236543 | None:intergenic | 35.0% | |
| ATAGGATAATGATCAGATGC+TGG | - | chr8.1:38233500-38233519 | None:intergenic | 35.0% | |
| ATATGGTAGCTGATCAGAAA+TGG | + | chr8.1:38238007-38238026 | MS.gene61036:CDS | 35.0% | |
| ATGCACAACATTCGACTAAA+TGG | + | chr8.1:38233752-38233771 | MS.gene61036:CDS | 35.0% | |
| ATGTGTGGATGCAAGAATAA+AGG | - | chr8.1:38232608-38232627 | None:intergenic | 35.0% | |
| ATTTCACAAAGGAGGAATTC+TGG | + | chr8.1:38234122-38234141 | MS.gene61036:intron | 35.0% | |
| CAACATATCAAATGTCTCTG+TGG | - | chr8.1:38235837-38235856 | None:intergenic | 35.0% | |
| CACAGAGACATTTGATATGT+TGG | + | chr8.1:38235835-38235854 | MS.gene61036:intron | 35.0% | |
| CAGATGAGAGAAAAGTGAAA+AGG | - | chr8.1:38234723-38234742 | None:intergenic | 35.0% | |
| CATATTTAGTGTGTAGTAGC+TGG | + | chr8.1:38235880-38235899 | MS.gene61036:intron | 35.0% | |
| CCATTATTCCAAAACTCAGA+AGG | - | chr8.1:38236863-38236882 | None:intergenic | 35.0% | |
| CGTTCTCATAACAAAAGTTG+CGG | - | chr8.1:38233565-38233584 | None:intergenic | 35.0% | |
| CTATCCTGCATATGTTAACT+AGG | + | chr8.1:38236517-38236536 | MS.gene61036:intron | 35.0% | |
| CTTACAATAGATAAGGTAGG+AGG | - | chr8.1:38235074-38235093 | None:intergenic | 35.0% | |
| GAAGAAAACAAGTTGCCAAT+TGG | - | chr8.1:38237358-38237377 | None:intergenic | 35.0% | |
| GAATTCCTCCTTTGTGAAAT+GGG | - | chr8.1:38234122-38234141 | None:intergenic | 35.0% | |
| GCATCCACACATTGATATAA+TGG | + | chr8.1:38232654-38232673 | MS.gene61036:intron | 35.0% | |
| GGGATCAACTGGTATTAATT+TGG | + | chr8.1:38237700-38237719 | MS.gene61036:intron | 35.0% | |
| GTAGGTATTCAATGATCCAA+TGG | + | chr8.1:38237298-38237317 | MS.gene61036:intron | 35.0% | |
| TACCTGTAGAGAAAAAAACG+CGG | + | chr8.1:38234553-38234572 | MS.gene61036:intron | 35.0% | |
| TAGAACTTGGTATAGAACAG+CGG | - | chr8.1:38233532-38233551 | None:intergenic | 35.0% | |
| TAGGTGATTGAAATTGGCAA+AGG | + | chr8.1:38237008-38237027 | MS.gene61036:intron | 35.0% | |
| TGAGATCAAGAAATGCTTCA+AGG | - | chr8.1:38238080-38238099 | None:intergenic | 35.0% | |
| TGGATAAGGTGATCATTGTT+TGG | - | chr8.1:38237580-38237599 | None:intergenic | 35.0% | |
| TGTTCGCATACACATACAAA+AGG | - | chr8.1:38236113-38236132 | None:intergenic | 35.0% | |
| TGTTCGCATACACATACAAA+GGG | - | chr8.1:38236113-38236132 | None:intergenic | 35.0% | |
| TTGAAAACAAATGAAGCTCC+TGG | - | chr8.1:38236776-38236795 | None:intergenic | 35.0% | |
| TTGTTCGCATACACATACAA+AGG | - | chr8.1:38236114-38236133 | None:intergenic | 35.0% | |
| TTTCACAAAGGAGGAATTCT+GGG | + | chr8.1:38234123-38234142 | MS.gene61036:intron | 35.0% | |
| ! | AATACATCAGACATGGGTTA+GGG | + | chr8.1:38232809-38232828 | MS.gene61036:intron | 35.0% |
| ! | AATACGCGTTTTCAGAAAAG+AGG | - | chr8.1:38234638-38234657 | None:intergenic | 35.0% |
| ! | CGTTTTCAGAAAAGAGGAAA+AGG | - | chr8.1:38234632-38234651 | None:intergenic | 35.0% |
| ! | GAAAAGGGATCTCTAAGTTT+TGG | - | chr8.1:38234707-38234726 | None:intergenic | 35.0% |
| ! | GAGCTTCAATTTTATTACGG+TGG | - | chr8.1:38232959-38232978 | None:intergenic | 35.0% |
| ! | TCATTTTCTGCTAATGCCAT+TGG | - | chr8.1:38237317-38237336 | None:intergenic | 35.0% |
| ! | TTAAATCTGGAATTGCACTC+GGG | - | chr8.1:38232881-38232900 | None:intergenic | 35.0% |
| !! | ATTCTGCTATTGGTTTATGG+AGG | + | chr8.1:38233120-38233139 | MS.gene61036:intron | 35.0% |
| !! | CTGATTCTGCTATTGGTTTA+TGG | + | chr8.1:38233117-38233136 | MS.gene61036:intron | 35.0% |
| !! | TGTTTGGTGTTGTATGTTAG+TGG | + | chr8.1:38236032-38236051 | MS.gene61036:intron | 35.0% |
| !! | TTGATTCTGAAATCCGTGAA+CGG | - | chr8.1:38234783-38234802 | None:intergenic | 35.0% |
| !! | TTTGGAGATGATTTGTTTGC+AGG | + | chr8.1:38237718-38237737 | MS.gene61036:intron | 35.0% |
| !! | TTTTGACTGCATTCCTTTAC+AGG | + | chr8.1:38237625-38237644 | MS.gene61036:intron | 35.0% |
| !!! | AGTTTTTTGTGCTTTTGGTG+TGG | + | chr8.1:38236064-38236083 | MS.gene61036:intron | 35.0% |
| !!! | CCTTCTGAGTTTTGGAATAA+TGG | + | chr8.1:38236860-38236879 | MS.gene61036:intron | 35.0% |
| !!! | CGGTGGCAATTTTGTTATTT+TGG | + | chr8.1:38234573-38234592 | MS.gene61036:intron | 35.0% |
| !!! | CTAAGTTTTGGGAAGAGTTT+AGG | - | chr8.1:38234695-38234714 | None:intergenic | 35.0% |
| !!! | GCATATCAGCTGGATTTTTT+TGG | + | chr8.1:38235947-38235966 | MS.gene61036:intron | 35.0% |
| AACAAGGTCACCAATGATCA+AGG | + | chr8.1:38233974-38233993 | MS.gene61036:CDS | 40.0% | |
| AAGAAATGCTTCAAGGCAGT+GGG | - | chr8.1:38238073-38238092 | None:intergenic | 40.0% | |
| AAGACTCTTGAACCAGGTAA+AGG | - | chr8.1:38233378-38233397 | None:intergenic | 40.0% | |
| ACACAATAACGTTTCTGCTC+CGG | + | chr8.1:38234042-38234061 | MS.gene61036:intron | 40.0% | |
| AGAAGAAACGCAAACAGTAG+CGG | - | chr8.1:38234816-38234835 | None:intergenic | 40.0% | |
| AGACTCTTGAACCAGGTAAA+GGG | - | chr8.1:38233377-38233396 | None:intergenic | 40.0% | |
| AGTCTCATTTACTAGAGGTG+AGG | + | chr8.1:38233789-38233808 | MS.gene61036:CDS | 40.0% | |
| ATGAAGAACTGCTTAAGTGG+GGG | + | chr8.1:38237974-38237993 | MS.gene61036:CDS | 40.0% | |
| ATGATGCATATTGGCGTCAA+AGG | + | chr8.1:38233840-38233859 | MS.gene61036:CDS | 40.0% | |
| CAATACATCAGACATGGGTT+AGG | + | chr8.1:38232808-38232827 | MS.gene61036:intron | 40.0% | |
| CACGACAAATCAACCTGTAA+AGG | - | chr8.1:38237641-38237660 | None:intergenic | 40.0% | |
| CACGTGAATCAACAAATGTG+TGG | - | chr8.1:38232623-38232642 | None:intergenic | 40.0% | |
| CAGATGAAGAACTGCTTAAG+TGG | + | chr8.1:38237971-38237990 | MS.gene61036:CDS | 40.0% | |
| CATAACAAAAGTTGCGGCAA+CGG | - | chr8.1:38233559-38233578 | None:intergenic | 40.0% | |
| CATATTCACTAGACGACTGA+CGG | - | chr8.1:38233205-38233224 | None:intergenic | 40.0% | |
| CATCACAACCAAGTCTCAAT+GGG | - | chr8.1:38235511-38235530 | None:intergenic | 40.0% | |
| CGCTACTCTTGAAAATCTTG+TGG | + | chr8.1:38233472-38233491 | MS.gene61036:intron | 40.0% | |
| CTAACCCATGTCTGATGTAT+TGG | - | chr8.1:38232810-38232829 | None:intergenic | 40.0% | |
| CTGCCAAATTAATTGTGACG+AGG | + | chr8.1:38237220-38237239 | MS.gene61036:intron | 40.0% | |
| GAAGCTCTTCGTTATTTGCT+CGG | + | chr8.1:38232972-38232991 | MS.gene61036:intron | 40.0% | |
| GAGTTATGTGTGATGCAGTT+TGG | + | chr8.1:38237913-38237932 | MS.gene61036:intron | 40.0% | |
| GATGAAGAACTGCTTAAGTG+GGG | + | chr8.1:38237973-38237992 | MS.gene61036:CDS | 40.0% | |
| GGGTTGTACAAAGAAGGAAA+AGG | - | chr8.1:38234668-38234687 | None:intergenic | 40.0% | |
| GGTCAAAAATCATTACCTGC+TGG | - | chr8.1:38235623-38235642 | None:intergenic | 40.0% | |
| GTAAAGGGATAACCTTCAAC+CGG | - | chr8.1:38233362-38233381 | None:intergenic | 40.0% | |
| GTCAATGGAAATTGGGAACA+GGG | + | chr8.1:38235365-38235384 | MS.gene61036:intron | 40.0% | |
| TACGCCAATACATCAGACAT+GGG | + | chr8.1:38232803-38232822 | MS.gene61036:intron | 40.0% | |
| TAGTGTGTAGTAGTTGGGTT+GGG | + | chr8.1:38236296-38236315 | MS.gene61036:intron | 40.0% | |
| TATATGTTAGCGGAGACATG+TGG | + | chr8.1:38235717-38235736 | MS.gene61036:intron | 40.0% | |
| TATGGACTCTAGTGAGAAGA+GGG | + | chr8.1:38233262-38233281 | MS.gene61036:intron | 40.0% | |
| TCACCAATGATCAAGGTATG+CGG | + | chr8.1:38233981-38234000 | MS.gene61036:intron | 40.0% | |
| TCCATCTAAACCACCTCATT+GGG | - | chr8.1:38237852-38237871 | None:intergenic | 40.0% | |
| TCTCATTCGGTACTTCAATC+CGG | + | chr8.1:38232905-38232924 | MS.gene61036:intron | 40.0% | |
| TGATGCATATTGGCGTCAAA+GGG | + | chr8.1:38233841-38233860 | MS.gene61036:CDS | 40.0% | |
| TGGCGAATCACATCAATAAC+CGG | - | chr8.1:38234064-38234083 | None:intergenic | 40.0% | |
| TGGCTCAAGATGATGCATAT+TGG | + | chr8.1:38233831-38233850 | MS.gene61036:CDS | 40.0% | |
| TGGGGACTTTGAACATTCAA+GGG | - | chr8.1:38238054-38238073 | None:intergenic | 40.0% | |
| TGGTGACTTCAACGACATTA+TGG | + | chr8.1:38233244-38233263 | MS.gene61036:intron | 40.0% | |
| TGTCAATGGAAATTGGGAAC+AGG | + | chr8.1:38235364-38235383 | MS.gene61036:intron | 40.0% | |
| TTACAGATCCCATTGAGACT+TGG | + | chr8.1:38235500-38235519 | MS.gene61036:intron | 40.0% | |
| TTAGTGTGTAGTAGTTGGGT+TGG | + | chr8.1:38236295-38236314 | MS.gene61036:intron | 40.0% | |
| TTATGGACTCTAGTGAGAAG+AGG | + | chr8.1:38233261-38233280 | MS.gene61036:intron | 40.0% | |
| TTCTGATCAGCTACCATATC+AGG | - | chr8.1:38238006-38238025 | None:intergenic | 40.0% | |
| TTGAAGGTTATCCCTTTACC+TGG | + | chr8.1:38233363-38233382 | MS.gene61036:intron | 40.0% | |
| TTTACCTGGTTCAAGAGTCT+TGG | + | chr8.1:38233377-38233396 | MS.gene61036:intron | 40.0% | |
| TTTGTTTACCTTCTTACGCG+CGG | - | chr8.1:38233927-38233946 | None:intergenic | 40.0% | |
| ! | ACATCAGGATTGTTTTCACG+TGG | + | chr8.1:38232675-38232694 | MS.gene61036:intron | 40.0% |
| ! | GTTGACTGTATTGGTAGAAG+TGG | + | chr8.1:38233014-38233033 | MS.gene61036:intron | 40.0% |
| ! | TGGTTTTCATCAGGCTGTTT+TGG | + | chr8.1:38233316-38233335 | MS.gene61036:intron | 40.0% |
| ! | TTGGGAAGAGTTTAGGGTTT+GGG | - | chr8.1:38234688-38234707 | None:intergenic | 40.0% |
| ! | TTTGGGAAGAGTTTAGGGTT+TGG | - | chr8.1:38234689-38234708 | None:intergenic | 40.0% |
| !! | ACTTTTGTTATGAGAACGCG+TGG | + | chr8.1:38233567-38233586 | MS.gene61036:CDS | 40.0% |
| !! | TGACATTGAAGAGTGTCGTA+GGG | + | chr8.1:38233727-38233746 | MS.gene61036:CDS | 40.0% |
| !! | TGTTTGGTGCTGTATGTTAG+TGG | + | chr8.1:38236393-38236412 | MS.gene61036:intron | 40.0% |
| !! | TTGACATTGAAGAGTGTCGT+AGG | + | chr8.1:38233726-38233745 | MS.gene61036:CDS | 40.0% |
| !! | TTGGGCTGTTTCTTACTATG+TGG | + | chr8.1:38235904-38235923 | MS.gene61036:intron | 40.0% |
| !! | TTGGTGTTGTATGTTTCAGC+TGG | + | chr8.1:38235986-38236005 | MS.gene61036:intron | 40.0% |
| !!! | GCATATCAGCTGGGTTTTTT+TGG | + | chr8.1:38236357-38236376 | MS.gene61036:intron | 40.0% |
| AACCTTTCTTCCACAGCTCT+AGG | - | chr8.1:38233407-38233426 | None:intergenic | 45.0% | |
| AGAAATGCTTCAAGGCAGTG+GGG | - | chr8.1:38238072-38238091 | None:intergenic | 45.0% | |
| AGGCCTCAGTGGCTTATTAA+TGG | + | chr8.1:38233296-38233315 | MS.gene61036:intron | 45.0% | |
| ATATTGGCGTCAAAGGGCAA+AGG | + | chr8.1:38233847-38233866 | MS.gene61036:CDS | 45.0% | |
| ATCCCGCATACCTTGATCAT+TGG | - | chr8.1:38233987-38234006 | None:intergenic | 45.0% | |
| ATGGACTCTAGTGAGAAGAG+GGG | + | chr8.1:38233263-38233282 | MS.gene61036:intron | 45.0% | |
| CAAGAAATGCTTCAAGGCAG+TGG | - | chr8.1:38238074-38238093 | None:intergenic | 45.0% | |
| CACCAATGATCAAGGTATGC+GGG | + | chr8.1:38233982-38234001 | MS.gene61036:intron | 45.0% | |
| CAGTCGTCTAGTGAATATGC+AGG | + | chr8.1:38233206-38233225 | MS.gene61036:intron | 45.0% | |
| CCATCACAACCAAGTCTCAA+TGG | - | chr8.1:38235512-38235531 | None:intergenic | 45.0% | |
| CCTTACGACCCATTTCACAA+AGG | + | chr8.1:38234111-38234130 | MS.gene61036:intron | 45.0% | |
| CCTTTGTGAAATGGGTCGTA+AGG | - | chr8.1:38234114-38234133 | None:intergenic | 45.0% | |
| CGTAAGGCTGATGTTGTCAT+GGG | - | chr8.1:38234098-38234117 | None:intergenic | 45.0% | |
| CTACGCCAATACATCAGACA+TGG | + | chr8.1:38232802-38232821 | MS.gene61036:intron | 45.0% | |
| CTGTAGAGAAAAAAACGCGG+TGG | + | chr8.1:38234556-38234575 | MS.gene61036:intron | 45.0% | |
| CTTCATGACTGTACCGTTCA+CGG | + | chr8.1:38234767-38234786 | MS.gene61036:intron | 45.0% | |
| GAACAGCGGTTCAGAAGAAT+AGG | - | chr8.1:38233518-38233537 | None:intergenic | 45.0% | |
| GAGCTCTTGCTAACAATGCT+TGG | + | chr8.1:38233432-38233451 | MS.gene61036:intron | 45.0% | |
| GATAATTGTGTCACATGGGC+TGG | + | chr8.1:38237813-38237832 | MS.gene61036:intron | 45.0% | |
| GCGCATGTGACATCAAATCA+TGG | + | chr8.1:38233675-38233694 | MS.gene61036:CDS | 45.0% | |
| GGTACAGTCATGAAGAGTCT+CGG | - | chr8.1:38234762-38234781 | None:intergenic | 45.0% | |
| GTCCATCTAAACCACCTCAT+TGG | - | chr8.1:38237853-38237872 | None:intergenic | 45.0% | |
| GTGGGGACTTTGAACATTCA+AGG | - | chr8.1:38238055-38238074 | None:intergenic | 45.0% | |
| GTTCACGGTTCTTCTACCTT+CGG | + | chr8.1:38234858-38234877 | MS.gene61036:intron | 45.0% | |
| TACGACCCATTTCACAAAGG+AGG | + | chr8.1:38234114-38234133 | MS.gene61036:intron | 45.0% | |
| TAGTGTGTAGTAGCTGGGTT+GGG | + | chr8.1:38235886-38235905 | MS.gene61036:intron | 45.0% | |
| TATAGAACCTGGGTTTCGAG+AGG | + | chr8.1:38233592-38233611 | MS.gene61036:CDS | 45.0% | |
| TATGCACCCGGATAAATGTC+CGG | + | chr8.1:38234159-38234178 | MS.gene61036:intron | 45.0% | |
| TCCCAATGAGGTGGTTTAGA+TGG | + | chr8.1:38237848-38237867 | MS.gene61036:intron | 45.0% | |
| TCGTAAGGCTGATGTTGTCA+TGG | - | chr8.1:38234099-38234118 | None:intergenic | 45.0% | |
| TCTTCTCTTGAGGATAGCAC+AGG | + | chr8.1:38233950-38233969 | MS.gene61036:CDS | 45.0% | |
| TGTAATGCAGAGGGATCAAC+TGG | + | chr8.1:38237689-38237708 | MS.gene61036:intron | 45.0% | |
| TGTACCAAGACTCTTGAACC+AGG | - | chr8.1:38233384-38233403 | None:intergenic | 45.0% | |
| TGTCATGGGCAGAAATAGCA+TGG | - | chr8.1:38234084-38234103 | None:intergenic | 45.0% | |
| TTAGTGTGTAGTAGCTGGGT+TGG | + | chr8.1:38235885-38235904 | MS.gene61036:intron | 45.0% | |
| TTGCTGGTAGCATATCAGCT+GGG | + | chr8.1:38236348-38236367 | MS.gene61036:intron | 45.0% | |
| TTGTATTACGGTCTCCGTCA+CGG | - | chr8.1:38233883-38233902 | None:intergenic | 45.0% | |
| TTTGCTGGTAGCATATCAGC+TGG | + | chr8.1:38236347-38236366 | MS.gene61036:intron | 45.0% | |
| ! | AGCATGACCCTTCTGAGTTT+TGG | + | chr8.1:38236852-38236871 | MS.gene61036:intron | 45.0% |
| ! | ATTGGTTTATGGAGGCTCAC+TGG | + | chr8.1:38233128-38233147 | MS.gene61036:intron | 45.0% |
| ! | CATCTCGAGTTTTCCCAATG+AGG | + | chr8.1:38237836-38237855 | MS.gene61036:intron | 45.0% |
| ! | CATGTCTGATGTATTGGCGT+AGG | - | chr8.1:38232804-38232823 | None:intergenic | 45.0% |
| ! | CCATTGAGACTTGGTTGTGA+TGG | + | chr8.1:38235509-38235528 | MS.gene61036:intron | 45.0% |
| ! | GACTGTATTGGTAGAAGTGG+AGG | + | chr8.1:38233017-38233036 | MS.gene61036:intron | 45.0% |
| ! | GAGAGGTTGTGACTGATTCA+TGG | + | chr8.1:38233609-38233628 | MS.gene61036:CDS | 45.0% |
| ! | TAGTTTTCACATCAGCGGAG+AGG | + | chr8.1:38234477-38234496 | MS.gene61036:intron | 45.0% |
| ! | TCGCTTAAGAAGAGTACGTC+CGG | - | chr8.1:38232927-38232946 | None:intergenic | 45.0% |
| ! | TGAGACTTGGTTGTGATGGT+GGG | + | chr8.1:38235513-38235532 | MS.gene61036:intron | 45.0% |
| ! | TGATGTATTGGCGTAGGCAA+GGG | - | chr8.1:38232798-38232817 | None:intergenic | 45.0% |
| ! | TGATTCTGATGACGAGAGTG+TGG | + | chr8.1:38238104-38238123 | MS.gene61036:CDS | 45.0% |
| ! | TTGAGACTTGGTTGTGATGG+TGG | + | chr8.1:38235512-38235531 | MS.gene61036:intron | 45.0% |
| !! | AAAAGGAGGGCGTTACAATC+TGG | - | chr8.1:38234187-38234206 | None:intergenic | 45.0% |
| !! | AAAGGAGGGCGTTACAATCT+GGG | - | chr8.1:38234186-38234205 | None:intergenic | 45.0% |
| !! | CTTTTGGTGTGGTTCTGTGA+GGG | + | chr8.1:38236075-38236094 | MS.gene61036:intron | 45.0% |
| !! | GGGTTTGGGTTGTACAAAGA+AGG | - | chr8.1:38234674-38234693 | None:intergenic | 45.0% |
| !! | TTTTGGTGTGGTTCTGTGAG+GGG | + | chr8.1:38236076-38236095 | MS.gene61036:intron | 45.0% |
| !!! | CACCGCGTTTTTTTCTCTAC+AGG | - | chr8.1:38234558-38234577 | None:intergenic | 45.0% |
| !!! | CAGCTGGATTTTTTTGGTGC+TGG | + | chr8.1:38235953-38235972 | MS.gene61036:intron | 45.0% |
| !! | AATGATATATAAAATTAAAA+TGG | - | chr8.1:38235586-38235605 | None:intergenic | 5.0% |
| AACGCGTGGCATATAGAACC+TGG | + | chr8.1:38233581-38233600 | MS.gene61036:CDS | 50.0% | |
| AAGGCTCATTGGTACCGTGA+CGG | + | chr8.1:38233866-38233885 | MS.gene61036:CDS | 50.0% | |
| AATAAGCCACTGAGGCCTAG+AGG | - | chr8.1:38233294-38233313 | None:intergenic | 50.0% | |
| ACAGTAGCGCGAACAGTATG+AGG | - | chr8.1:38234840-38234859 | None:intergenic | 50.0% | |
| ACGCGTGGCATATAGAACCT+GGG | + | chr8.1:38233582-38233601 | MS.gene61036:CDS | 50.0% | |
| ACTGTTCGCGCTACTGTTCA+CGG | + | chr8.1:38234843-38234862 | MS.gene61036:intron | 50.0% | |
| AGAAACGCAAACAGTAGCGG+AGG | - | chr8.1:38234813-38234832 | None:intergenic | 50.0% | |
| ATGCACCCGGATAAATGTCC+GGG | + | chr8.1:38234160-38234179 | MS.gene61036:intron | 50.0% | |
| CACCTAGAGCTGTGGAAGAA+AGG | + | chr8.1:38233402-38233421 | MS.gene61036:intron | 50.0% | |
| CGGCAACGGAGATTAGAACT+TGG | - | chr8.1:38233545-38233564 | None:intergenic | 50.0% | |
| CTAGTGAATATGCAGGCCCT+TGG | + | chr8.1:38233213-38233232 | MS.gene61036:intron | 50.0% | |
| CTATTACGGGTACCCCAATG+GGG | + | chr8.1:38233151-38233170 | MS.gene61036:intron | 50.0% | |
| GATCAGAAATGGTGTGCCCA+TGG | + | chr8.1:38238018-38238037 | MS.gene61036:CDS | 50.0% | |
| GCTATTACGGGTACCCCAAT+GGG | + | chr8.1:38233150-38233169 | MS.gene61036:intron | 50.0% | |
| GTCAAAGGGCAAAGGCTCAT+TGG | + | chr8.1:38233855-38233874 | MS.gene61036:CDS | 50.0% | |
| GTGAGTGTGCGCCATATTCA+TGG | + | chr8.1:38235168-38235187 | MS.gene61036:intron | 50.0% | |
| TACCTGCTGGTCCCTACATT+AGG | - | chr8.1:38235610-38235629 | None:intergenic | 50.0% | |
| TCTTGGTACACCTAGAGCTG+TGG | + | chr8.1:38233394-38233413 | MS.gene61036:intron | 50.0% | |
| TGAGGATAGCACAGGCAACA+AGG | + | chr8.1:38233958-38233977 | MS.gene61036:CDS | 50.0% | |
| TGGACTCTAGTGAGAAGAGG+GGG | + | chr8.1:38233264-38233283 | MS.gene61036:intron | 50.0% | |
| TTCCTAATGTAGGGACCAGC+AGG | + | chr8.1:38235605-38235624 | MS.gene61036:intron | 50.0% | |
| TTTGCTGGCAGCATATCAGC+TGG | + | chr8.1:38235937-38235956 | MS.gene61036:intron | 50.0% | |
| ! | CATGCGCATGATGCTAGTCT+AGG | - | chr8.1:38233662-38233681 | None:intergenic | 50.0% |
| ! | CGCATGATGCTAGTCTAGGA+AGG | - | chr8.1:38233658-38233677 | None:intergenic | 50.0% |
| ! | CGCGATGTTTTCTATGCACC+CGG | + | chr8.1:38234147-38234166 | MS.gene61036:intron | 50.0% |
| ! | CTCGAGTTTTCCCAATGAGG+TGG | + | chr8.1:38237839-38237858 | MS.gene61036:intron | 50.0% |
| ! | CTGATGTATTGGCGTAGGCA+AGG | - | chr8.1:38232799-38232818 | None:intergenic | 50.0% |
| ! | GTGGAGGTCTCGCTTTATTC+TGG | + | chr8.1:38233033-38233052 | MS.gene61036:intron | 50.0% |
| ! | GTGTTATCGGTTGGAACTGC+CGG | + | chr8.1:38232844-38232863 | MS.gene61036:intron | 50.0% |
| ! | TGGAGGCTCACTGGCTATTA+CGG | + | chr8.1:38233137-38233156 | MS.gene61036:intron | 50.0% |
| ! | TGTGTGATGCAGTTTGGGAC+TGG | + | chr8.1:38237919-38237938 | MS.gene61036:intron | 50.0% |
| ! | TGTTATCGGTTGGAACTGCC+GGG | + | chr8.1:38232845-38232864 | MS.gene61036:intron | 50.0% |
| !! | CATCAGGCTGTTTTGGATGC+AGG | + | chr8.1:38233323-38233342 | MS.gene61036:intron | 50.0% |
| !! | GCAGGCCCTTGGTGTATTTT+TGG | + | chr8.1:38233224-38233243 | MS.gene61036:intron | 50.0% |
| !! | GCTTTTGGTGTGGTTCTGTG+AGG | + | chr8.1:38236074-38236093 | MS.gene61036:intron | 50.0% |
| !! | TTGGGCTGTTTCTTGCTCTG+TGG | + | chr8.1:38236314-38236333 | MS.gene61036:intron | 50.0% |
| !!! | CAGCTGGGTTTTTTTGGTGC+TGG | + | chr8.1:38236363-38236382 | MS.gene61036:intron | 50.0% |
| ACAGATCTGTACTCCGCCGA+AGG | - | chr8.1:38234877-38234896 | None:intergenic | 55.0% | |
| AGCGGAGAGGAATGTCTGAG+GGG | + | chr8.1:38234490-38234509 | MS.gene61036:intron | 55.0% | |
| AGCTCGTCTACGTTCCCCAT+TGG | - | chr8.1:38233168-38233187 | None:intergenic | 55.0% | |
| CACGGTTCTTCTACCTTCGG+CGG | + | chr8.1:38234861-38234880 | MS.gene61036:intron | 55.0% | |
| CAGCGGAGAGGAATGTCTGA+GGG | + | chr8.1:38234489-38234508 | MS.gene61036:intron | 55.0% | |
| CTCGTCTACGTTCCCCATTG+GGG | - | chr8.1:38233166-38233185 | None:intergenic | 55.0% | |
| GCTCGTCTACGTTCCCCATT+GGG | - | chr8.1:38233167-38233186 | None:intergenic | 55.0% | |
| GGCTATTACGGGTACCCCAA+TGG | + | chr8.1:38233149-38233168 | MS.gene61036:intron | 55.0% | |
| GTCACAACCTCTCGAAACCC+AGG | - | chr8.1:38233602-38233621 | None:intergenic | 55.0% | |
| GTTTACCTTCTTACGCGCGG+AGG | - | chr8.1:38233924-38233943 | None:intergenic | 55.0% | |
| TCAGCGGAGAGGAATGTCTG+AGG | + | chr8.1:38234488-38234507 | MS.gene61036:intron | 55.0% | |
| TCTGGGCCCGGACATTTATC+CGG | - | chr8.1:38234169-38234188 | None:intergenic | 55.0% | |
| TGCAGGTTTGTCAGACGTGC+CGG | + | chr8.1:38233340-38233359 | MS.gene61036:intron | 55.0% | |
| TGGCGCACACTCACACAAAC+AGG | - | chr8.1:38235162-38235181 | None:intergenic | 55.0% | |
| ! | GACTGGTGGAGAGTACAACG+TGG | + | chr8.1:38237936-38237955 | MS.gene61036:CDS | 55.0% |
| ! | GGAGGCTCACTGGCTATTAC+GGG | + | chr8.1:38233138-38233157 | MS.gene61036:intron | 55.0% |
| ! | GTGATGCAGTTTGGGACTGG+TGG | + | chr8.1:38237922-38237941 | MS.gene61036:intron | 55.0% |
| ! | GTTATCGGTTGGAACTGCCG+GGG | + | chr8.1:38232846-38232865 | MS.gene61036:intron | 55.0% |
| ! | TGTGGCAGTCTGCTGTTTGC+TGG | + | chr8.1:38235922-38235941 | MS.gene61036:intron | 55.0% |
| !! | GACTTGGTTGTGATGGTGGG+TGG | + | chr8.1:38235516-38235535 | MS.gene61036:intron | 55.0% |
| !! | TTGTCAGACGTGCCGGTTGA+AGG | + | chr8.1:38233347-38233366 | MS.gene61036:intron | 55.0% |
| AGAAGAGGGGGCTCACCTCT+AGG | + | chr8.1:38233276-38233295 | MS.gene61036:intron | 60.0% | |
| ATGGTGTGCCCATGGCAGCA+AGG | + | chr8.1:38238026-38238045 | MS.gene61036:CDS | 60.0% | |
| CAAGGGAGCCTTGCTGCCAT+GGG | - | chr8.1:38238037-38238056 | None:intergenic | 60.0% | |
| CTGGGCCCGGACATTTATCC+GGG | - | chr8.1:38234168-38234187 | None:intergenic | 60.0% | |
| GGAACGTAGACGAGCTGCGT+GGG | + | chr8.1:38233172-38233191 | MS.gene61036:intron | 60.0% | |
| GGTTGGAACTGCCGGGGTTT+AGG | + | chr8.1:38232852-38232871 | MS.gene61036:intron | 60.0% | |
| GTGGGGGCTCTCTCCTGATA+TGG | + | chr8.1:38237990-38238009 | MS.gene61036:CDS | 60.0% | |
| TCAAGGGAGCCTTGCTGCCA+TGG | - | chr8.1:38238038-38238057 | None:intergenic | 60.0% | |
| ! | AGGGCGTTACAATCTGGGCC+CGG | - | chr8.1:38234181-38234200 | None:intergenic | 60.0% |
| ! | CACTCGGGTTGCCTAAACCC+CGG | - | chr8.1:38232866-38232885 | None:intergenic | 60.0% |
| !! | TGGTGCTGGCAGCAGCTGTT+TGG | + | chr8.1:38235967-38235986 | MS.gene61036:intron | 60.0% |
| AGCTGCCTCCGCGCGTAAGA+AGG | + | chr8.1:38233916-38233935 | MS.gene61036:CDS | 65.0% | |
| GGCTCACCTCTAGGCCTCAG+TGG | + | chr8.1:38233285-38233304 | MS.gene61036:intron | 65.0% | |
| GGGAACGTAGACGAGCTGCG+TGG | + | chr8.1:38233171-38233190 | MS.gene61036:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 38232536 | 38238134 | 38232536 | ID=MS.gene61036 |
| chr8.1 | mRNA | 38232536 | 38238134 | 38232536 | ID=MS.gene61036.t1;Parent=MS.gene61036 |
| chr8.1 | exon | 38232536 | 38232587 | 38232536 | ID=MS.gene61036.t1.exon1;Parent=MS.gene61036.t1 |
| chr8.1 | CDS | 38232536 | 38232587 | 38232536 | ID=cds.MS.gene61036.t1;Parent=MS.gene61036.t1 |
| chr8.1 | exon | 38233501 | 38233995 | 38233501 | ID=MS.gene61036.t1.exon2;Parent=MS.gene61036.t1 |
| chr8.1 | CDS | 38233501 | 38233995 | 38233501 | ID=cds.MS.gene61036.t1;Parent=MS.gene61036.t1 |
| chr8.1 | exon | 38235009 | 38235088 | 38235009 | ID=MS.gene61036.t1.exon3;Parent=MS.gene61036.t1 |
| chr8.1 | CDS | 38235009 | 38235088 | 38235009 | ID=cds.MS.gene61036.t1;Parent=MS.gene61036.t1 |
| chr8.1 | exon | 38237011 | 38237076 | 38237011 | ID=MS.gene61036.t1.exon4;Parent=MS.gene61036.t1 |
| chr8.1 | CDS | 38237011 | 38237076 | 38237011 | ID=cds.MS.gene61036.t1;Parent=MS.gene61036.t1 |
| chr8.1 | exon | 38237931 | 38238134 | 38237931 | ID=MS.gene61036.t1.exon5;Parent=MS.gene61036.t1 |
| chr8.1 | CDS | 38237931 | 38238134 | 38237931 | ID=cds.MS.gene61036.t1;Parent=MS.gene61036.t1 |
| Gene Sequence |
| Protein sequence |
