Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61325.t1 | XP_003620633.1 | 100 | 162 | 0 | 0 | 1 | 162 | 1 | 162 | 2.90E-86 | 327.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61325.t1 | Q9XEX2 | 73.5 | 162 | 43 | 0 | 1 | 162 | 1 | 162 | 1.1e-70 | 267.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61325.t1 | G7KPG2 | 100.0 | 162 | 0 | 0 | 1 | 162 | 1 | 162 | 2.1e-86 | 327.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055701 | MS.gene61325 | -0.817546 | 3.12E-52 | -1.69E-46 |
| MS.gene059615 | MS.gene61325 | 0.822784 | 1.97E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61325 | MS.gene061512 | PPI |
| MS.gene061511 | MS.gene61325 | PPI |
| MS.gene61325 | MS.gene061510 | PPI |
| MS.gene059614 | MS.gene61325 | PPI |
| MS.gene61325 | MS.gene61324 | PPI |
| MS.gene61325 | MS.gene059615 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61325.t1 | MTR_6g087990 | 100.000 | 162 | 0 | 0 | 1 | 162 | 1 | 162 | 2.82e-116 | 326 |
| MS.gene61325.t1 | MTR_7g103610 | 55.828 | 163 | 70 | 1 | 2 | 162 | 55 | 217 | 4.25e-63 | 193 |
| MS.gene61325.t1 | MTR_7g103610 | 56.081 | 148 | 63 | 1 | 2 | 147 | 55 | 202 | 8.57e-56 | 175 |
| MS.gene61325.t1 | MTR_2g022660 | 42.446 | 139 | 79 | 1 | 22 | 159 | 58 | 196 | 5.82e-33 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61325.t1 | AT1G65980 | 73.457 | 162 | 43 | 0 | 1 | 162 | 1 | 162 | 3.92e-92 | 265 |
| MS.gene61325.t1 | AT1G65970 | 72.222 | 162 | 45 | 0 | 1 | 162 | 1 | 162 | 1.96e-90 | 260 |
| MS.gene61325.t1 | AT1G60740 | 71.605 | 162 | 46 | 0 | 1 | 162 | 1 | 162 | 1.98e-89 | 258 |
| MS.gene61325.t1 | AT3G52960 | 56.098 | 164 | 69 | 2 | 2 | 162 | 71 | 234 | 3.99e-61 | 189 |
| MS.gene61325.t1 | AT1G65990 | 58.553 | 152 | 59 | 1 | 1 | 152 | 1 | 148 | 3.72e-59 | 192 |
| MS.gene61325.t1 | AT1G65980 | 73.077 | 78 | 21 | 0 | 1 | 78 | 1 | 78 | 1.46e-39 | 129 |
| MS.gene61325.t1 | AT3G06050 | 46.032 | 126 | 67 | 1 | 35 | 159 | 73 | 198 | 1.61e-35 | 122 |
| MS.gene61325.t1 | AT3G06050 | 53.571 | 56 | 26 | 0 | 35 | 90 | 73 | 128 | 1.49e-18 | 78.6 |
Find 47 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAAGAGCATGTGTGTATT+TGG | 0.245539 | 6.3:+81216057 | None:intergenic |
| GTCATCATCTTTGCTGTTCC+TGG | 0.271985 | 6.3:-81217572 | MS.gene61325:CDS |
| CATTTGCAACCTTCACCTTC+AGG | 0.298861 | 6.3:+81215966 | None:intergenic |
| GTGCCTTCACACCCACTTGC+AGG | 0.324438 | 6.3:-81217550 | MS.gene61325:intron |
| AACAGCTTGAAGCATGTTCC+TGG | 0.350575 | 6.3:-81216853 | MS.gene61325:intron |
| AACTTGACATGCTTGTTCTC+TGG | 0.352143 | 6.3:+81216097 | None:intergenic |
| ATCACATCTCCTACTTTGAT+TGG | 0.352692 | 6.3:+81217677 | None:intergenic |
| GCCAAATACACACATGCTCT+TGG | 0.365981 | 6.3:-81216058 | MS.gene61325:CDS |
| AGGAAGGCTAAGGTGCCATC+TGG | 0.393148 | 6.3:+81217653 | None:intergenic |
| ATCCATTTGTGCTGAATTCA+TGG | 0.400960 | 6.3:-81216132 | MS.gene61325:CDS |
| GCCCATGAATTCAGCACAAA+TGG | 0.408653 | 6.3:+81216130 | None:intergenic |
| ACTTGACATGCTTGTTCTCT+GGG | 0.413856 | 6.3:+81216098 | None:intergenic |
| CTTGTTCTCTGGGAATGTCT+TGG | 0.426261 | 6.3:+81216108 | None:intergenic |
| GAATGAATGGTGACAGATTG+AGG | 0.441168 | 6.3:+81217614 | None:intergenic |
| AACAAGAAGAGCAAACCTCT+TGG | 0.455187 | 6.3:+81215994 | None:intergenic |
| CCAAATACACACATGCTCTT+GGG | 0.477554 | 6.3:-81216057 | MS.gene61325:CDS |
| CTTGATGATTTCTTCAGCAC+CGG | 0.493646 | 6.3:+81215916 | None:intergenic |
| GCCGGCAGAGAGGGAATGAA+TGG | 0.496618 | 6.3:+81217601 | None:intergenic |
| CAAGTGGGTGTGAAGGCACC+AGG | 0.499182 | 6.3:+81217554 | None:intergenic |
| TTCTTCATCAAGGAAGGCTA+AGG | 0.511511 | 6.3:+81217643 | None:intergenic |
| GACCTCAGCGACAAAGGTCT+CGG | 0.528430 | 6.3:-81216025 | MS.gene61325:CDS |
| GGAGGAGAATACACCATCTC+CGG | 0.528627 | 6.3:-81215935 | MS.gene61325:CDS |
| TCAGAAGAGCTGAAAGGAAA+GGG | 0.536940 | 6.3:-81216817 | MS.gene61325:CDS |
| GATTTCTTCAGCACCGGAGA+TGG | 0.540136 | 6.3:+81215922 | None:intergenic |
| TCTGATCTCTCAATGAAGCC+AGG | 0.542391 | 6.3:+81216835 | None:intergenic |
| CATGTCAAGTTCCTTGCTGA+TGG | 0.542780 | 6.3:-81216085 | MS.gene61325:CDS |
| GGAAGGCTAAGGTGCCATCT+GGG | 0.546906 | 6.3:+81217654 | None:intergenic |
| GAGCTTGACCTCAGCGACAA+AGG | 0.549694 | 6.3:-81216031 | MS.gene61325:CDS |
| TCAATGGCTCCAATCAAAGT+AGG | 0.550950 | 6.3:-81217686 | MS.gene61325:CDS |
| ATACACACATGCTCTTGGGT+TGG | 0.558587 | 6.3:-81216053 | MS.gene61325:CDS |
| ACCATTCATTCCCTCTCTGC+CGG | 0.561297 | 6.3:-81217602 | MS.gene61325:CDS |
| AAGGTTGCAAATGTTGAAGA+AGG | 0.566267 | 6.3:-81215956 | MS.gene61325:CDS |
| TCTTCTTGTTGAAGACCTGA+AGG | 0.568574 | 6.3:-81215981 | MS.gene61325:CDS |
| ATCAGAAGAGCTGAAAGGAA+AGG | 0.571012 | 6.3:-81216818 | MS.gene61325:CDS |
| GTTGCAAATGTTGAAGAAGG+AGG | 0.581974 | 6.3:-81215953 | MS.gene61325:CDS |
| TGCCGAGACCTTTGTCGCTG+AGG | 0.592538 | 6.3:+81216023 | None:intergenic |
| CGGTGCTGAAGAAATCATCA+AGG | 0.594261 | 6.3:-81215915 | MS.gene61325:CDS |
| TAACCTGCAAGTGGGTGTGA+AGG | 0.601313 | 6.3:+81217547 | None:intergenic |
| TCCATTTGTGCTGAATTCAT+GGG | 0.611814 | 6.3:-81216131 | MS.gene61325:CDS |
| GAGAGATCAGAAGAGCTGAA+AGG | 0.621848 | 6.3:-81216823 | MS.gene61325:CDS |
| AAAAGAGGTTAACCTGCAAG+TGG | 0.626645 | 6.3:+81217538 | None:intergenic |
| GTAGGAGATGTGATCCCAGA+TGG | 0.630920 | 6.3:-81217668 | MS.gene61325:CDS |
| TGTTGAAGACCTGAAGGTGA+AGG | 0.633342 | 6.3:-81215975 | MS.gene61325:CDS |
| GTCTCGGCATTCGCTCCAAG+AGG | 0.644758 | 6.3:-81216009 | MS.gene61325:CDS |
| GATGAAATCATCTGCATCAG+TGG | 0.655212 | 6.3:-81216790 | MS.gene61325:intron |
| AAAGAGGTTAACCTGCAAGT+GGG | 0.674981 | 6.3:+81217539 | None:intergenic |
| ATTTGGCAGAGCCATCAGCA+AGG | 0.708029 | 6.3:+81216074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAGAAAACTTTA+CGG | + | chr6.3:81216162-81216181 | None:intergenic | 10.0% |
| !!! | TCAATTTTATTTCATTTTTA+GGG | + | chr6.3:81216102-81216121 | None:intergenic | 10.0% |
| !!! | TTCAATTTTATTTCATTTTT+AGG | + | chr6.3:81216103-81216122 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTTGTATAAAATT+CGG | - | chr6.3:81216564-81216583 | MS.gene61325:intron | 10.0% |
| !!! | TATAAAATTCGGAAATTTTA+AGG | - | chr6.3:81216575-81216594 | MS.gene61325:intron | 15.0% |
| !!! | TCAAATTGTCTTATTTTTAT+TGG | - | chr6.3:81216530-81216549 | MS.gene61325:intron | 15.0% |
| !!! | TCTAATTATGTTATTTTGTT+TGG | - | chr6.3:81216714-81216733 | MS.gene61325:intron | 15.0% |
| !!! | TGAATGTATTTTTTATAATG+TGG | - | chr6.3:81217101-81217120 | MS.gene61325:intron | 15.0% |
| !!! | TTTTTATTTGATTTATGTGT+TGG | - | chr6.3:81216173-81216192 | MS.gene61325:intron | 15.0% |
| !! | ATAAAATTGAATCAGATTCA+TGG | - | chr6.3:81216112-81216131 | MS.gene61325:CDS | 20.0% |
| !! | ATGCAAAAAAAATGAATCAA+AGG | + | chr6.3:81216223-81216242 | None:intergenic | 20.0% |
| !! | GTGAAAAACAAATAAATCAA+AGG | + | chr6.3:81216304-81216323 | None:intergenic | 20.0% |
| !! | TAAAATTGAATCAGATTCAT+GGG | - | chr6.3:81216113-81216132 | MS.gene61325:CDS | 20.0% |
| !!! | ATCTATGAGAATTTTGAAAT+GGG | - | chr6.3:81216503-81216522 | MS.gene61325:intron | 20.0% |
| ! | AATTACAAAGCTTGAAATCT+AGG | + | chr6.3:81217242-81217261 | None:intergenic | 25.0% |
| ! | ATCTATGAATGCTTCAAAAT+TGG | - | chr6.3:81216954-81216973 | MS.gene61325:intron | 25.0% |
| ! | TCTATGAATGCTTCAAAATT+GGG | - | chr6.3:81216955-81216974 | MS.gene61325:intron | 25.0% |
| !! | ATTTAACTGAATTAGCTTCA+TGG | - | chr6.3:81216275-81216294 | MS.gene61325:intron | 25.0% |
| !! | TTTAACTGAATTAGCTTCAT+GGG | - | chr6.3:81216276-81216295 | MS.gene61325:intron | 25.0% |
| !!! | AATTTTAAGGATACTGTTTG+AGG | - | chr6.3:81216588-81216607 | MS.gene61325:intron | 25.0% |
| !!! | GATCTATGAGAATTTTGAAA+TGG | - | chr6.3:81216502-81216521 | MS.gene61325:intron | 25.0% |
| !!! | GTTTTGTTTCACTTTTTACA+AGG | - | chr6.3:81216643-81216662 | MS.gene61325:intron | 25.0% |
| !!! | TTTTTAGGGTTAAGATTTGA+AGG | + | chr6.3:81216088-81216107 | None:intergenic | 25.0% |
| AAATTCAGATTGCCTGTAAT+CGG | + | chr6.3:81217321-81217340 | None:intergenic | 30.0% | |
| AGAAAAGCTGCATTAAAATC+TGG | - | chr6.3:81217278-81217297 | MS.gene61325:intron | 30.0% | |
| CAACATCATAAGTATAGAAC+AGG | + | chr6.3:81217365-81217384 | None:intergenic | 30.0% | |
| CTATGAATGCTTCAAAATTG+GGG | - | chr6.3:81216956-81216975 | MS.gene61325:intron | 30.0% | |
| CTGTTCTATACTTATGATGT+TGG | - | chr6.3:81217363-81217382 | MS.gene61325:intron | 30.0% | |
| GAAGGAAAATTGATGAAAAG+AGG | + | chr6.3:81216070-81216089 | None:intergenic | 30.0% | |
| TGATTCAATGTCTTGCTAAA+TGG | - | chr6.3:81217060-81217079 | MS.gene61325:intron | 30.0% | |
| ! | ATTAGACTGAATTAGCTTCA+TGG | - | chr6.3:81216357-81216376 | MS.gene61325:intron | 30.0% |
| ! | GCTTGTTACTTGATTCTATA+TGG | - | chr6.3:81216978-81216997 | MS.gene61325:intron | 30.0% |
| ! | TTACTAATGTTACCGATTAC+AGG | - | chr6.3:81217306-81217325 | MS.gene61325:intron | 30.0% |
| ! | TTAGACTGAATTAGCTTCAT+GGG | - | chr6.3:81216358-81216377 | MS.gene61325:intron | 30.0% |
| !! | TTTGTTTTCTTCATCAAGGA+AGG | + | chr6.3:81215956-81215975 | None:intergenic | 30.0% |
| !!! | AAAGATGATGACTTTTTTGC+CGG | + | chr6.3:81216010-81216029 | None:intergenic | 30.0% |
| AAGGTTGCAAATGTTGAAGA+AGG | - | chr6.3:81217634-81217653 | MS.gene61325:CDS | 35.0% | |
| AAGGTTGTCTTGGTAAAAAG+GGG | - | chr6.3:81216662-81216681 | MS.gene61325:intron | 35.0% | |
| ACAAGGTTGTCTTGGTAAAA+AGG | - | chr6.3:81216660-81216679 | MS.gene61325:intron | 35.0% | |
| ATCACATCTCCTACTTTGAT+TGG | + | chr6.3:81215916-81215935 | None:intergenic | 35.0% | |
| ATCCATTTGTGCTGAATTCA+TGG | - | chr6.3:81217458-81217477 | MS.gene61325:intron | 35.0% | |
| CAAGGTTGTCTTGGTAAAAA+GGG | - | chr6.3:81216661-81216680 | MS.gene61325:intron | 35.0% | |
| TAACACATTGTATTCGCCAA+TGG | + | chr6.3:81217147-81217166 | None:intergenic | 35.0% | |
| TCCATTTGTGCTGAATTCAT+GGG | - | chr6.3:81217459-81217478 | MS.gene61325:intron | 35.0% | |
| TGTCTTGCTAAATGGTGATA+TGG | - | chr6.3:81217068-81217087 | MS.gene61325:intron | 35.0% | |
| !! | ATTTCACTCGATTAGCTTCA+TGG | - | chr6.3:81216194-81216213 | MS.gene61325:intron | 35.0% |
| !! | CACTTTTTACAAGGTTGTCT+TGG | - | chr6.3:81216652-81216671 | MS.gene61325:intron | 35.0% |
| !! | GAGGTTTGTTTTCTTCATCA+AGG | + | chr6.3:81215960-81215979 | None:intergenic | 35.0% |
| !! | TTTCACTCGATTAGCTTCAT+GGG | - | chr6.3:81216195-81216214 | MS.gene61325:intron | 35.0% |
| AAAAGAGGTTAACCTGCAAG+TGG | + | chr6.3:81216055-81216074 | None:intergenic | 40.0% | |
| AAAGAGGTTAACCTGCAAGT+GGG | + | chr6.3:81216054-81216073 | None:intergenic | 40.0% | |
| AACAAGAAGAGCAAACCTCT+TGG | + | chr6.3:81217599-81217618 | None:intergenic | 40.0% | |
| AACTTGACATGCTTGTTCTC+TGG | + | chr6.3:81217496-81217515 | None:intergenic | 40.0% | |
| ACTTGACATGCTTGTTCTCT+GGG | + | chr6.3:81217495-81217514 | None:intergenic | 40.0% | |
| AGGATACTGTTTGAGGATAG+AGG | - | chr6.3:81216595-81216614 | MS.gene61325:intron | 40.0% | |
| ATCAGAAGAGCTGAAAGGAA+AGG | - | chr6.3:81216772-81216791 | MS.gene61325:intron | 40.0% | |
| CCAAATACACACATGCTCTT+GGG | - | chr6.3:81217533-81217552 | MS.gene61325:intron | 40.0% | |
| GAATGAATGGTGACAGATTG+AGG | + | chr6.3:81215979-81215998 | None:intergenic | 40.0% | |
| GATGAAATCATCTGCATCAG+TGG | - | chr6.3:81216800-81216819 | MS.gene61325:CDS | 40.0% | |
| GCTTGAAATCTAGGCAATCT+AGG | + | chr6.3:81217233-81217252 | None:intergenic | 40.0% | |
| GTTGCAAATGTTGAAGAAGG+AGG | - | chr6.3:81217637-81217656 | MS.gene61325:CDS | 40.0% | |
| TCAGAAGAGCTGAAAGGAAA+GGG | - | chr6.3:81216773-81216792 | MS.gene61325:intron | 40.0% | |
| TCTTCTTGTTGAAGACCTGA+AGG | - | chr6.3:81217609-81217628 | MS.gene61325:CDS | 40.0% | |
| TTCTTCATCAAGGAAGGCTA+AGG | + | chr6.3:81215950-81215969 | None:intergenic | 40.0% | |
| TTGAGGATAGAGGAACATCA+TGG | - | chr6.3:81216605-81216624 | MS.gene61325:intron | 40.0% | |
| TTTGTCACATCGATACCTGT+TGG | - | chr6.3:81217192-81217211 | MS.gene61325:intron | 40.0% | |
| ! | AACTGAAAGCTTTGTGCCAT+TGG | - | chr6.3:81217128-81217147 | MS.gene61325:intron | 40.0% |
| ! | CTTGATGATTTCTTCAGCAC+CGG | + | chr6.3:81217677-81217696 | None:intergenic | 40.0% |
| AACAGCTTGAAGCATGTTCC+TGG | - | chr6.3:81216737-81216756 | MS.gene61325:intron | 45.0% | |
| ATACACACATGCTCTTGGGT+TGG | - | chr6.3:81217537-81217556 | MS.gene61325:intron | 45.0% | |
| CATGTCAAGTTCCTTGCTGA+TGG | - | chr6.3:81217505-81217524 | MS.gene61325:intron | 45.0% | |
| CATTTGCAACCTTCACCTTC+AGG | + | chr6.3:81217627-81217646 | None:intergenic | 45.0% | |
| GAGAGATCAGAAGAGCTGAA+AGG | - | chr6.3:81216767-81216786 | MS.gene61325:intron | 45.0% | |
| GATACCTGTTGGATCGAGAT+TGG | - | chr6.3:81217203-81217222 | MS.gene61325:intron | 45.0% | |
| GCCAAATACACACATGCTCT+TGG | - | chr6.3:81217532-81217551 | MS.gene61325:intron | 45.0% | |
| GCCCATGAATTCAGCACAAA+TGG | + | chr6.3:81217463-81217482 | None:intergenic | 45.0% | |
| TCTGATCTCTCAATGAAGCC+AGG | + | chr6.3:81216758-81216777 | None:intergenic | 45.0% | |
| TGTTGAAGACCTGAAGGTGA+AGG | - | chr6.3:81217615-81217634 | MS.gene61325:CDS | 45.0% | |
| ! | CCCAAGAGCATGTGTGTATT+TGG | + | chr6.3:81217536-81217555 | None:intergenic | 45.0% |
| ! | CGGTGCTGAAGAAATCATCA+AGG | - | chr6.3:81217675-81217694 | MS.gene61325:CDS | 45.0% |
| ! | CTTGTTCTCTGGGAATGTCT+TGG | + | chr6.3:81217485-81217504 | None:intergenic | 45.0% |
| !! | GTCATCATCTTTGCTGTTCC+TGG | - | chr6.3:81216018-81216037 | MS.gene61325:CDS | 45.0% |
| ACCATTCATTCCCTCTCTGC+CGG | - | chr6.3:81215988-81216007 | MS.gene61325:CDS | 50.0% | |
| ATTTGGCAGAGCCATCAGCA+AGG | + | chr6.3:81217519-81217538 | None:intergenic | 50.0% | |
| CAGTCCAATCTCGATCCAAC+AGG | + | chr6.3:81217210-81217229 | None:intergenic | 50.0% | |
| GGAGGAGAATACACCATCTC+CGG | - | chr6.3:81217655-81217674 | MS.gene61325:CDS | 50.0% | |
| GTAGGAGATGTGATCCCAGA+TGG | - | chr6.3:81215922-81215941 | MS.gene61325:CDS | 50.0% | |
| TAACCTGCAAGTGGGTGTGA+AGG | + | chr6.3:81216046-81216065 | None:intergenic | 50.0% | |
| ! | GATTTCTTCAGCACCGGAGA+TGG | + | chr6.3:81217671-81217690 | None:intergenic | 50.0% |
| !!! | GACTTTTTTGCCGGCAGAGA+GGG | + | chr6.3:81216001-81216020 | None:intergenic | 50.0% |
| !!! | TGACTTTTTTGCCGGCAGAG+AGG | + | chr6.3:81216002-81216021 | None:intergenic | 50.0% |
| GACCTCAGCGACAAAGGTCT+CGG | - | chr6.3:81217565-81217584 | MS.gene61325:CDS | 55.0% | |
| GAGCTTGACCTCAGCGACAA+AGG | - | chr6.3:81217559-81217578 | MS.gene61325:CDS | 55.0% | |
| ! | AGGAAGGCTAAGGTGCCATC+TGG | + | chr6.3:81215940-81215959 | None:intergenic | 55.0% |
| ! | GGAAGGCTAAGGTGCCATCT+GGG | + | chr6.3:81215939-81215958 | None:intergenic | 55.0% |
| GCCGGCAGAGAGGGAATGAA+TGG | + | chr6.3:81215992-81216011 | None:intergenic | 60.0% | |
| GTCTCGGCATTCGCTCCAAG+AGG | - | chr6.3:81217581-81217600 | MS.gene61325:CDS | 60.0% | |
| GTGCCTTCACACCCACTTGC+AGG | - | chr6.3:81216040-81216059 | MS.gene61325:CDS | 60.0% | |
| TGCCGAGACCTTTGTCGCTG+AGG | + | chr6.3:81217570-81217589 | None:intergenic | 60.0% | |
| !! | CAAGTGGGTGTGAAGGCACC+AGG | + | chr6.3:81216039-81216058 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 81215907 | 81217705 | 81215907 | ID=MS.gene61325 |
| chr6.3 | mRNA | 81215907 | 81217705 | 81215907 | ID=MS.gene61325.t1;Parent=MS.gene61325 |
| chr6.3 | exon | 81217551 | 81217705 | 81217551 | ID=MS.gene61325.t1.exon1;Parent=MS.gene61325.t1 |
| chr6.3 | CDS | 81217551 | 81217705 | 81217551 | ID=cds.MS.gene61325.t1;Parent=MS.gene61325.t1 |
| chr6.3 | exon | 81216791 | 81216870 | 81216791 | ID=MS.gene61325.t1.exon2;Parent=MS.gene61325.t1 |
| chr6.3 | CDS | 81216791 | 81216870 | 81216791 | ID=cds.MS.gene61325.t1;Parent=MS.gene61325.t1 |
| chr6.3 | exon | 81215907 | 81216160 | 81215907 | ID=MS.gene61325.t1.exon3;Parent=MS.gene61325.t1 |
| chr6.3 | CDS | 81215907 | 81216160 | 81215907 | ID=cds.MS.gene61325.t1;Parent=MS.gene61325.t1 |
| Gene Sequence |
| Protein sequence |
