Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61384.t1 | KEH27129.1 | 97.8 | 407 | 9 | 0 | 1 | 407 | 1 | 407 | 1.20E-234 | 822 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61384.t1 | Q9SVQ1 | 67.4 | 384 | 122 | 2 | 13 | 396 | 21 | 401 | 2.2e-155 | 550.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61384.t1 | A0A072UBE4 | 97.8 | 407 | 9 | 0 | 1 | 407 | 1 | 407 | 8.8e-235 | 822.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052459 | MS.gene61384 | 0.886149 | 4.39E-72 | -1.69E-46 |
| MS.gene05549 | MS.gene61384 | 0.937571 | 2.79E-98 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61384.t1 | MTR_6g086870 | 97.549 | 408 | 10 | 0 | 1 | 408 | 1 | 408 | 0.0 | 821 |
| MS.gene61384.t1 | MTR_1g008380 | 68.123 | 389 | 120 | 2 | 13 | 401 | 35 | 419 | 0.0 | 561 |
| MS.gene61384.t1 | MTR_3g109520 | 67.003 | 397 | 128 | 1 | 5 | 401 | 24 | 417 | 0.0 | 560 |
| MS.gene61384.t1 | MTR_1g011630 | 60.152 | 394 | 149 | 3 | 12 | 405 | 8 | 393 | 0.0 | 512 |
| MS.gene61384.t1 | MTR_1g069275 | 59.296 | 398 | 155 | 4 | 4 | 400 | 9 | 400 | 2.95e-176 | 498 |
| MS.gene61384.t1 | MTR_1g046230 | 57.990 | 388 | 161 | 2 | 13 | 400 | 17 | 402 | 2.41e-175 | 496 |
| MS.gene61384.t1 | MTR_7g099330 | 56.281 | 398 | 162 | 4 | 4 | 400 | 9 | 395 | 1.99e-167 | 476 |
| MS.gene61384.t1 | MTR_7g099160 | 54.140 | 314 | 133 | 3 | 88 | 400 | 213 | 516 | 2.73e-120 | 360 |
| MS.gene61384.t1 | MTR_8g432640 | 44.327 | 379 | 202 | 3 | 21 | 398 | 7 | 377 | 3.00e-118 | 349 |
| MS.gene61384.t1 | MTR_7g107690 | 44.180 | 378 | 202 | 4 | 21 | 397 | 9 | 378 | 3.81e-118 | 349 |
| MS.gene61384.t1 | MTR_5g033260 | 45.932 | 381 | 195 | 4 | 21 | 399 | 7 | 378 | 5.52e-117 | 346 |
| MS.gene61384.t1 | MTR_7g107710 | 46.950 | 377 | 189 | 6 | 21 | 395 | 7 | 374 | 8.73e-116 | 343 |
| MS.gene61384.t1 | MTR_3g088925 | 43.750 | 384 | 207 | 3 | 21 | 403 | 8 | 383 | 1.73e-112 | 335 |
| MS.gene61384.t1 | MTR_3g088945 | 43.490 | 384 | 208 | 3 | 21 | 403 | 8 | 383 | 1.18e-111 | 333 |
| MS.gene61384.t1 | MTR_3g088955 | 43.750 | 384 | 207 | 3 | 21 | 403 | 8 | 383 | 1.19e-111 | 333 |
| MS.gene61384.t1 | MTR_4g051642 | 43.959 | 389 | 205 | 6 | 21 | 408 | 8 | 384 | 2.63e-111 | 332 |
| MS.gene61384.t1 | MTR_3g096030 | 38.798 | 183 | 83 | 3 | 18 | 199 | 4 | 158 | 3.97e-36 | 130 |
| MS.gene61384.t1 | MTR_3g437580 | 24.658 | 219 | 129 | 8 | 22 | 207 | 15 | 230 | 3.12e-13 | 70.9 |
| MS.gene61384.t1 | MTR_3g437580 | 24.658 | 219 | 129 | 8 | 22 | 207 | 15 | 230 | 8.53e-13 | 70.1 |
| MS.gene61384.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 1.75e-12 | 67.8 |
| MS.gene61384.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 2.59e-12 | 67.8 |
| MS.gene61384.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 5.28e-12 | 67.4 |
| MS.gene61384.t1 | MTR_8g037880 | 25.352 | 213 | 127 | 7 | 22 | 208 | 6 | 212 | 5.95e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61384.t1 | AT4G13260 | 67.273 | 385 | 123 | 2 | 12 | 396 | 20 | 401 | 0.0 | 553 |
| MS.gene61384.t1 | AT5G25620 | 63.184 | 402 | 141 | 2 | 1 | 400 | 13 | 409 | 0.0 | 541 |
| MS.gene61384.t1 | AT5G25620 | 63.184 | 402 | 141 | 2 | 1 | 400 | 13 | 409 | 0.0 | 540 |
| MS.gene61384.t1 | AT5G11320 | 58.418 | 392 | 153 | 2 | 8 | 399 | 5 | 386 | 7.01e-175 | 494 |
| MS.gene61384.t1 | AT1G04610 | 58.505 | 388 | 160 | 1 | 13 | 400 | 30 | 416 | 1.50e-172 | 489 |
| MS.gene61384.t1 | AT4G32540 | 56.000 | 400 | 166 | 3 | 2 | 400 | 3 | 393 | 1.21e-168 | 479 |
| MS.gene61384.t1 | AT4G32540 | 55.970 | 402 | 165 | 4 | 2 | 400 | 3 | 395 | 7.73e-167 | 474 |
| MS.gene61384.t1 | AT5G43890 | 56.298 | 389 | 166 | 3 | 13 | 400 | 18 | 403 | 3.28e-166 | 473 |
| MS.gene61384.t1 | AT4G28720 | 54.177 | 395 | 178 | 3 | 13 | 406 | 18 | 410 | 1.98e-165 | 471 |
| MS.gene61384.t1 | AT1G04180 | 56.298 | 389 | 163 | 4 | 13 | 400 | 18 | 400 | 3.81e-165 | 470 |
| MS.gene61384.t1 | AT2G33230 | 57.732 | 388 | 162 | 1 | 13 | 400 | 25 | 410 | 1.01e-164 | 469 |
| MS.gene61384.t1 | AT5G11320 | 57.988 | 338 | 133 | 1 | 8 | 345 | 5 | 333 | 1.13e-148 | 426 |
| MS.gene61384.t1 | AT4G13260 | 64.286 | 294 | 102 | 2 | 12 | 305 | 20 | 310 | 1.91e-141 | 405 |
| MS.gene61384.t1 | AT4G13260 | 66.781 | 292 | 94 | 2 | 106 | 397 | 11 | 299 | 8.56e-141 | 404 |
| MS.gene61384.t1 | AT1G21430 | 46.579 | 380 | 189 | 6 | 21 | 397 | 10 | 378 | 1.56e-121 | 358 |
| MS.gene61384.t1 | AT1G48910 | 43.229 | 384 | 209 | 3 | 21 | 403 | 6 | 381 | 1.07e-117 | 348 |
| MS.gene61384.t1 | AT1G19250 | 23.684 | 380 | 211 | 16 | 22 | 336 | 15 | 380 | 1.26e-14 | 75.9 |
| MS.gene61384.t1 | AT5G61290 | 26.941 | 219 | 127 | 6 | 22 | 209 | 18 | 234 | 5.06e-14 | 73.9 |
| MS.gene61384.t1 | AT1G65860 | 23.744 | 219 | 126 | 6 | 22 | 208 | 15 | 224 | 3.21e-13 | 71.6 |
| MS.gene61384.t1 | AT1G62560 | 22.222 | 216 | 134 | 5 | 22 | 208 | 15 | 225 | 1.67e-12 | 68.9 |
| MS.gene61384.t1 | AT1G62560 | 22.222 | 216 | 134 | 5 | 22 | 208 | 15 | 225 | 2.03e-12 | 68.9 |
| MS.gene61384.t1 | AT5G45180 | 26.446 | 242 | 136 | 10 | 22 | 227 | 15 | 250 | 2.64e-12 | 68.6 |
Find 79 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTATGTGGTTGCTTAAA+TGG | 0.146621 | 6.3:+80348107 | MS.gene61384:CDS |
| ATCTTGCCACAACAAATATT+TGG | 0.151089 | 6.3:+80348067 | MS.gene61384:CDS |
| TTGATGTTGTTTGTGGATTT+TGG | 0.180380 | 6.3:+80346049 | MS.gene61384:CDS |
| TTATTGAATATTTATGTAAA+TGG | 0.192064 | 6.3:+80346115 | MS.gene61384:CDS |
| CTTGGAGATACATCTCAATT+TGG | 0.240393 | 6.3:+80348181 | MS.gene61384:CDS |
| GTAAAATCAATATTGGTTTC+AGG | 0.248308 | 6.3:+80345727 | MS.gene61384:CDS |
| CTAATGTCAGATCTTATTCT+TGG | 0.255630 | 6.3:+80348163 | MS.gene61384:CDS |
| AATCAAAACTGGCAAAATTA+AGG | 0.280803 | 6.3:+80348288 | MS.gene61384:CDS |
| TCAAAACCTATGATAGATTA+AGG | 0.300700 | 6.3:+80345866 | MS.gene61384:CDS |
| TTCAGGCATGGAGGTTTGTT+TGG | 0.304733 | 6.3:+80346287 | MS.gene61384:CDS |
| GTGGTGGGGTGTGGAAATTC+AGG | 0.309535 | 6.3:+80346270 | MS.gene61384:CDS |
| GGACCAGCTCCAACTATAAT+TGG | 0.317043 | 6.3:-80345751 | None:intergenic |
| TACAAACTAGTATGCAAAAT+TGG | 0.319837 | 6.3:-80346210 | None:intergenic |
| TTTCTCCTTTCCATCCATTT+GGG | 0.321282 | 6.3:-80350137 | None:intergenic |
| CAATGTACCCACTTGGTTAA+AGG | 0.324458 | 6.3:+80349388 | MS.gene61384:CDS |
| GGATATGATGGTAACCCTTT+TGG | 0.329198 | 6.3:-80345934 | None:intergenic |
| TAGCATAGTAAAATCAATAT+TGG | 0.331896 | 6.3:+80345720 | MS.gene61384:CDS |
| CTAAACAATTAGCTCTTTCA+AGG | 0.332301 | 6.3:-80345828 | None:intergenic |
| GCAGCATGTCTTAAACAAAA+AGG | 0.336756 | 6.3:+80345790 | MS.gene61384:CDS |
| GTACGGCAAGACACCTGTTT+TGG | 0.342983 | 6.3:+80348246 | MS.gene61384:CDS |
| GGAAGTTGACAAAATTGCTT+TGG | 0.369775 | 6.3:-80345898 | None:intergenic |
| GCTGAATTTGATGTTGTTTG+TGG | 0.371638 | 6.3:+80346042 | MS.gene61384:CDS |
| TCTTGCCACAACAAATATTT+GGG | 0.374850 | 6.3:+80348068 | MS.gene61384:CDS |
| CCATTTGGGAACGGTTTCCT+TGG | 0.378581 | 6.3:-80350123 | None:intergenic |
| ATGAAGCCTTAATCTATCAT+AGG | 0.395063 | 6.3:-80345872 | None:intergenic |
| TGTTCCATCCCTTCAATTTG+AGG | 0.407826 | 6.3:-80346177 | None:intergenic |
| AATACAGTGGAATTTGTTGA+TGG | 0.421286 | 6.3:+80349317 | MS.gene61384:CDS |
| CTCTTATGCCATTTCCAAAA+GGG | 0.422373 | 6.3:+80345920 | MS.gene61384:CDS |
| CCTCTTATGCCATTTCCAAA+AGG | 0.423790 | 6.3:+80345919 | MS.gene61384:CDS |
| CTAAGGATGGATGAGCATTA+TGG | 0.423920 | 6.3:-80346320 | None:intergenic |
| GTTTCAGGACCAATTATAGT+TGG | 0.432090 | 6.3:+80345742 | MS.gene61384:CDS |
| TTCACTAAACGTGGGTTGCT+TGG | 0.432993 | 6.3:+80350180 | MS.gene61384:CDS |
| TGTTGCTTTGTTGGATATGA+TGG | 0.433600 | 6.3:-80345946 | None:intergenic |
| CCAAGGAAACCGTTCCCAAA+TGG | 0.436893 | 6.3:+80350123 | MS.gene61384:CDS |
| ACAGTAGCTCAAATCAAAAC+TGG | 0.443872 | 6.3:+80348277 | MS.gene61384:CDS |
| GATGCTATCATTCTAGCTAC+TGG | 0.448404 | 6.3:+80349356 | MS.gene61384:CDS |
| TAATGCTCATCCATCCTTAG+TGG | 0.456388 | 6.3:+80346323 | MS.gene61384:CDS |
| CAGAAGATATTGAAACTAGC+TGG | 0.460121 | 6.3:+80350229 | MS.gene61384:CDS |
| AAATGGATGGAAAGGAGAAA+AGG | 0.461272 | 6.3:+80350140 | MS.gene61384:CDS |
| ATAGTTGGAGCTGGTCCCTC+AGG | 0.471984 | 6.3:+80345757 | MS.gene61384:CDS |
| TATATACGTGTAGGTTTGCA+AGG | 0.483343 | 6.3:+80349274 | MS.gene61384:intron |
| TCTAATTCATACAAGTGGCT+TGG | 0.484263 | 6.3:-80350265 | None:intergenic |
| AACTAGCTGGAAATCTGTTA+AGG | 0.485182 | 6.3:+80350242 | MS.gene61384:CDS |
| CCTTTCCATCCATTTGGGAA+CGG | 0.497265 | 6.3:-80350132 | None:intergenic |
| GAAGTTGTGCCTCAAATTGA+AGG | 0.497449 | 6.3:+80346168 | MS.gene61384:CDS |
| GAAGGGATGGAACAATTTCA+AGG | 0.500090 | 6.3:+80346186 | MS.gene61384:CDS |
| AATGGATGGAAAGGAGAAAA+GGG | 0.503618 | 6.3:+80350141 | MS.gene61384:CDS |
| ACTGTCCCAACATCCAAAAC+AGG | 0.506565 | 6.3:-80348259 | None:intergenic |
| ATCCTTAGTGGTTAGAGATA+CGG | 0.509760 | 6.3:+80346335 | MS.gene61384:CDS |
| GCTCTTTCAAGGATTTGACT+TGG | 0.513216 | 6.3:-80345817 | None:intergenic |
| GGAATTTGTTGATGGGAAAG+TGG | 0.531587 | 6.3:+80349325 | MS.gene61384:CDS |
| GGACCAATTATAGTTGGAGC+TGG | 0.539189 | 6.3:+80345748 | MS.gene61384:CDS |
| GGCACATGATCATCAAAAGA+AGG | 0.539333 | 6.3:+80345696 | MS.gene61384:CDS |
| CCGTTCCCAAATGGATGGAA+AGG | 0.540578 | 6.3:+80350132 | MS.gene61384:CDS |
| CACCGTATCTCTAACCACTA+AGG | 0.547811 | 6.3:-80346337 | None:intergenic |
| CATACTAGTTTGTATAAGAG+TGG | 0.551040 | 6.3:+80346219 | MS.gene61384:CDS |
| GACATGTTTAGTGAGAAAGA+TGG | 0.552783 | 6.3:+80350096 | MS.gene61384:CDS |
| GAAAAGGGACTATATGCTGT+TGG | 0.553034 | 6.3:+80350156 | MS.gene61384:CDS |
| GATTTCCCAAATATTTGTTG+TGG | 0.553414 | 6.3:-80348073 | None:intergenic |
| GTTCATCTATTGATGCAAAG+AGG | 0.556561 | 6.3:+80350202 | MS.gene61384:CDS |
| GGAAACCGTTCCCAAATGGA+TGG | 0.562029 | 6.3:+80350127 | MS.gene61384:CDS |
| TGTGCCTCAAATTGAAGGGA+TGG | 0.564740 | 6.3:+80346173 | MS.gene61384:CDS |
| ATGAAGCACCTTTAACCAAG+TGG | 0.566971 | 6.3:-80349396 | None:intergenic |
| GCTGTTGGTTTCACTAAACG+TGG | 0.580511 | 6.3:+80350171 | MS.gene61384:CDS |
| ATACAGTGGAATTTGTTGAT+GGG | 0.584603 | 6.3:+80349318 | MS.gene61384:CDS |
| TGCTGCTGCTGCTAATCCTG+AGG | 0.591531 | 6.3:-80345773 | None:intergenic |
| GTATCTCTAACCACTAAGGA+TGG | 0.609523 | 6.3:-80346333 | None:intergenic |
| AAGTTGTGCCTCAAATTGAA+GGG | 0.631817 | 6.3:+80346169 | MS.gene61384:CDS |
| ATATACGTGTAGGTTTGCAA+GGG | 0.641719 | 6.3:+80349275 | MS.gene61384:intron |
| GTGTGGAAATTCAGGCATGG+AGG | 0.642809 | 6.3:+80346278 | MS.gene61384:CDS |
| CTAATTGTTTAGCTTCAATG+TGG | 0.650137 | 6.3:+80345839 | MS.gene61384:CDS |
| ACAGAAGCAATGTACCCACT+TGG | 0.652396 | 6.3:+80349381 | MS.gene61384:CDS |
| GGGGTGTGGAAATTCAGGCA+TGG | 0.657648 | 6.3:+80346275 | MS.gene61384:CDS |
| GCTGCTGCTGCTAATCCTGA+GGG | 0.658588 | 6.3:-80345772 | None:intergenic |
| TGAAGCACCTTTAACCAAGT+GGG | 0.672138 | 6.3:-80349395 | None:intergenic |
| AAATGGTTGATTGTTGCTAG+TGG | 0.673168 | 6.3:+80346132 | MS.gene61384:CDS |
| CTGTTGGTTTCACTAAACGT+GGG | 0.687223 | 6.3:+80350172 | MS.gene61384:CDS |
| ACGACTAGCACATAATACAG+TGG | 0.706423 | 6.3:+80349304 | MS.gene61384:CDS |
| TGCTAGTGGTGAAAATGCTG+AGG | 0.712690 | 6.3:+80346146 | MS.gene61384:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATTGTAAAATA+AGG | - | chr6.3:80349699-80349718 | None:intergenic | 10.0% |
| !! | CATTAAAAATCAATTATATA+AGG | + | chr6.3:80349850-80349869 | MS.gene61384:intron | 10.0% |
| !! | TTATTGAATATTTATGTAAA+TGG | + | chr6.3:80346115-80346134 | MS.gene61384:CDS | 10.0% |
| !! | TTGTTTATATTAAAATGATA+AGG | + | chr6.3:80347081-80347100 | MS.gene61384:intron | 10.0% |
| !!! | TAAAGAAAATAATCTTTTTA+GGG | - | chr6.3:80348007-80348026 | None:intergenic | 10.0% |
| !!! | TAAGAAACAATTAATTTTTT+TGG | - | chr6.3:80346706-80346725 | None:intergenic | 10.0% |
| !!! | TTAAAGAAAATAATCTTTTT+AGG | - | chr6.3:80348008-80348027 | None:intergenic | 10.0% |
| !! | CTTCATATAAGAATTAATTA+TGG | + | chr6.3:80348617-80348636 | MS.gene61384:intron | 15.0% |
| !! | TACATTATACTACTAAAAAA+AGG | + | chr6.3:80349032-80349051 | MS.gene61384:intron | 15.0% |
| !! | TAGAATATTAAAAATCATAG+AGG | - | chr6.3:80348796-80348815 | None:intergenic | 15.0% |
| !! | TGTTTAGTTATTTATATAGA+GGG | - | chr6.3:80348865-80348884 | None:intergenic | 15.0% |
| !! | TTGTTTAGTTATTTATATAG+AGG | - | chr6.3:80348866-80348885 | None:intergenic | 15.0% |
| !!! | ACAATTTTTATCTTACTTAA+AGG | + | chr6.3:80345966-80345985 | MS.gene61384:CDS | 15.0% |
| !!! | ACTTTTTTGATAATATGAAT+CGG | - | chr6.3:80348924-80348943 | None:intergenic | 15.0% |
| !!! | TAAGAAAAAGTTAACTTTTT+AGG | + | chr6.3:80346617-80346636 | MS.gene61384:intron | 15.0% |
| !!! | TTACATATAGTTGATAAATA+TGG | + | chr6.3:80349425-80349444 | MS.gene61384:intron | 15.0% |
| !!! | TTTGATATAAATCCTATTTT+TGG | + | chr6.3:80346003-80346022 | MS.gene61384:CDS | 15.0% |
| !!! | TTTTTTATTTTTATTTGTGC+AGG | + | chr6.3:80348039-80348058 | MS.gene61384:intron | 15.0% |
| !!! | TTTTTTTAAAAACTTTGTGT+AGG | + | chr6.3:80349055-80349074 | MS.gene61384:intron | 15.0% |
| !! | AAAAAGAATGAAATGTTAAC+CGG | + | chr6.3:80347355-80347374 | MS.gene61384:intron | 20.0% |
| !! | AAACCAGTCTAATTTAAAAA+TGG | + | chr6.3:80346887-80346906 | MS.gene61384:intron | 20.0% |
| !! | AAATCAATTATATAAGGATG+AGG | + | chr6.3:80349856-80349875 | MS.gene61384:intron | 20.0% |
| !! | AAGAGATTTGATCTTTAATT+TGG | - | chr6.3:80347287-80347306 | None:intergenic | 20.0% |
| !! | ACACTTAACAAAATTAAAGA+TGG | - | chr6.3:80349649-80349668 | None:intergenic | 20.0% |
| !! | ACTCAAGAAATTATGAAAAA+TGG | + | chr6.3:80346081-80346100 | MS.gene61384:CDS | 20.0% |
| !! | ATAAATATGGTAAATAGCAT+AGG | + | chr6.3:80349438-80349457 | MS.gene61384:intron | 20.0% |
| !! | ATTAGAGACATCAAATTTAT+AGG | + | chr6.3:80346507-80346526 | MS.gene61384:intron | 20.0% |
| !! | ATTGAAATTCATTGTGATTA+GGG | + | chr6.3:80350069-80350088 | MS.gene61384:intron | 20.0% |
| !! | GAGTTGAATAAAAAAAACTA+AGG | + | chr6.3:80348555-80348574 | MS.gene61384:intron | 20.0% |
| !! | GTAAATGATAAACAATTTAC+AGG | + | chr6.3:80346923-80346942 | MS.gene61384:intron | 20.0% |
| !! | TAAGATAAGTACATTAAGTT+TGG | + | chr6.3:80347040-80347059 | MS.gene61384:intron | 20.0% |
| !! | TAGCATAGTAAAATCAATAT+TGG | + | chr6.3:80345720-80345739 | MS.gene61384:CDS | 20.0% |
| !! | TATTAGACAAAATCTAATGA+TGG | - | chr6.3:80349246-80349265 | None:intergenic | 20.0% |
| !! | TCTCACATAAAATAAAGATA+AGG | + | chr6.3:80349793-80349812 | MS.gene61384:intron | 20.0% |
| !! | TGATTATGAAGATGTAAAAT+TGG | - | chr6.3:80349147-80349166 | None:intergenic | 20.0% |
| !! | TGTTAATACAATATCAAACT+AGG | - | chr6.3:80349953-80349972 | None:intergenic | 20.0% |
| !! | TTAGAGACATCAAATTTATA+GGG | + | chr6.3:80346508-80346527 | MS.gene61384:intron | 20.0% |
| !! | TTCTTAAGATTTACTTCATT+TGG | - | chr6.3:80347948-80347967 | None:intergenic | 20.0% |
| !!! | ATATTTGGGAAATCAATTTT+TGG | + | chr6.3:80348082-80348101 | MS.gene61384:CDS | 20.0% |
| !!! | ATGTCTCTAGTTTTTTTTTT+AGG | - | chr6.3:80349531-80349550 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTCTATCTCTATT+TGG | + | chr6.3:80349711-80349730 | MS.gene61384:intron | 20.0% |
| !!! | ATTAGCTTCTTCAAAAAAAA+TGG | + | chr6.3:80347706-80347725 | MS.gene61384:intron | 20.0% |
| !!! | ATTTTGCTTATAAAAGTGAT+CGG | - | chr6.3:80347861-80347880 | None:intergenic | 20.0% |
| !!! | TAACATTTTTTATGCTTTTG+AGG | - | chr6.3:80347448-80347467 | None:intergenic | 20.0% |
| !!! | TATGGCAATTATTTCTTTTT+GGG | - | chr6.3:80347536-80347555 | None:intergenic | 20.0% |
| !!! | TGTCTCTAGTTTTTTTTTTA+GGG | - | chr6.3:80349530-80349549 | None:intergenic | 20.0% |
| !!! | TTTTTAAATTAGACTGGTTT+AGG | - | chr6.3:80346887-80346906 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTGATTAAGAC+AGG | - | chr6.3:80348412-80348431 | None:intergenic | 20.0% |
| ! | AAAAAGGTTGTTAAAGCAAA+TGG | + | chr6.3:80347574-80347593 | MS.gene61384:intron | 25.0% |
| ! | AAAGAAGTTAGTTGTAATGA+CGG | - | chr6.3:80347010-80347029 | None:intergenic | 25.0% |
| ! | AATCAAAACTGGCAAAATTA+AGG | + | chr6.3:80348288-80348307 | MS.gene61384:CDS | 25.0% |
| ! | ATCATCTAATATATACGTGT+AGG | + | chr6.3:80349265-80349284 | MS.gene61384:intron | 25.0% |
| ! | GATTGAAATTCATTGTGATT+AGG | + | chr6.3:80350068-80350087 | MS.gene61384:intron | 25.0% |
| ! | GTAAAAGAACACTTGAAAAT+CGG | - | chr6.3:80346764-80346783 | None:intergenic | 25.0% |
| ! | TACAAACTAGTATGCAAAAT+TGG | - | chr6.3:80346213-80346232 | None:intergenic | 25.0% |
| ! | TCAAAACCTATGATAGATTA+AGG | + | chr6.3:80345866-80345885 | MS.gene61384:CDS | 25.0% |
| ! | TTAGAGCTTAAAAACTTGTA+CGG | + | chr6.3:80348229-80348248 | MS.gene61384:CDS | 25.0% |
| ! | TTCTTATAATAATGACCGAA+GGG | + | chr6.3:80346720-80346739 | MS.gene61384:intron | 25.0% |
| ! | TTTCTTATAATAATGACCGA+AGG | + | chr6.3:80346719-80346738 | MS.gene61384:intron | 25.0% |
| !! | AATAAGATGAAAAACCCTTT+TGG | - | chr6.3:80348342-80348361 | None:intergenic | 25.0% |
| !! | AATATTACACTCTATCGATT+TGG | + | chr6.3:80349902-80349921 | MS.gene61384:intron | 25.0% |
| !! | ATCACAAATCATTTTCTCTT+TGG | - | chr6.3:80348976-80348995 | None:intergenic | 25.0% |
| !! | CTTTTTCTTATAACAAGAAC+CGG | - | chr6.3:80346607-80346626 | None:intergenic | 25.0% |
| !! | TTTGCTTTAACAACCTTTTT+AGG | - | chr6.3:80347574-80347593 | None:intergenic | 25.0% |
| !!! | AAATAATCTTTTTAGGGAAC+TGG | - | chr6.3:80348001-80348020 | None:intergenic | 25.0% |
| !!! | AAGATCCATTTGTTTTTCAA+AGG | + | chr6.3:80347111-80347130 | MS.gene61384:intron | 25.0% |
| !!! | ATATCTCTCTTTTTTTCTCT+TGG | + | chr6.3:80349204-80349223 | MS.gene61384:intron | 25.0% |
| !!! | ATATTACACTCTATCGATTT+GGG | + | chr6.3:80349903-80349922 | MS.gene61384:intron | 25.0% |
| !!! | CAATTTTTGGTTTATCTATG+TGG | + | chr6.3:80348095-80348114 | MS.gene61384:CDS | 25.0% |
| !!! | CTATGGCAATTATTTCTTTT+TGG | - | chr6.3:80347537-80347556 | None:intergenic | 25.0% |
| !!! | GATAAAAATTGTTGCTTTGT+TGG | - | chr6.3:80345958-80345977 | None:intergenic | 25.0% |
| !!! | GTAAAATCAATATTGGTTTC+AGG | + | chr6.3:80345727-80345746 | MS.gene61384:CDS | 25.0% |
| !!! | TACAAGTTTTTAAGCTCTAA+AGG | - | chr6.3:80348229-80348248 | None:intergenic | 25.0% |
| !!! | TGTCCATTTTTAAATTAGAC+TGG | - | chr6.3:80346893-80346912 | None:intergenic | 25.0% |
| AATTCTCTCAGATGTCAATT+GGG | + | chr6.3:80347675-80347694 | MS.gene61384:intron | 30.0% | |
| ACATACCAATCAAATCCAAA+AGG | + | chr6.3:80348324-80348343 | MS.gene61384:intron | 30.0% | |
| ATCTTGCCACAACAAATATT+TGG | + | chr6.3:80348067-80348086 | MS.gene61384:CDS | 30.0% | |
| ATGAAGCCTTAATCTATCAT+AGG | - | chr6.3:80345875-80345894 | None:intergenic | 30.0% | |
| CATACCAATCAAATCCAAAA+GGG | + | chr6.3:80348325-80348344 | MS.gene61384:intron | 30.0% | |
| CATAGGAAAGAGTTGAATTA+AGG | + | chr6.3:80349455-80349474 | MS.gene61384:intron | 30.0% | |
| CTAATGTCAGATCTTATTCT+TGG | + | chr6.3:80348163-80348182 | MS.gene61384:CDS | 30.0% | |
| CTGGTTAAGGAAACTAAAAA+AGG | - | chr6.3:80347488-80347507 | None:intergenic | 30.0% | |
| GATGTAAAATTGGTTATGAC+AGG | - | chr6.3:80349137-80349156 | None:intergenic | 30.0% | |
| GGAATTGAAAGACCAAAAAT+TGG | + | chr6.3:80348202-80348221 | MS.gene61384:CDS | 30.0% | |
| GTGTCTACAATTTCCTAAAA+AGG | + | chr6.3:80347558-80347577 | MS.gene61384:intron | 30.0% | |
| TAACAAGTGTCTTAAACAAG+TGG | + | chr6.3:80347734-80347753 | MS.gene61384:intron | 30.0% | |
| TAGTTGACAATTTGATCACA+TGG | - | chr6.3:80349008-80349027 | None:intergenic | 30.0% | |
| TATCTATGTGGTTGCTTAAA+TGG | + | chr6.3:80348107-80348126 | MS.gene61384:CDS | 30.0% | |
| TCTTGCCACAACAAATATTT+GGG | + | chr6.3:80348068-80348087 | MS.gene61384:CDS | 30.0% | |
| TTGAAATAGCCACACAAATT+TGG | + | chr6.3:80346433-80346452 | MS.gene61384:intron | 30.0% | |
| TTTGAATATTGTCGAGTTCA+TGG | - | chr6.3:80349114-80349133 | None:intergenic | 30.0% | |
| ! | AAAACCCTTTTGGATTTGAT+TGG | - | chr6.3:80348332-80348351 | None:intergenic | 30.0% |
| ! | CATACTAGTTTGTATAAGAG+TGG | + | chr6.3:80346219-80346238 | MS.gene61384:CDS | 30.0% |
| ! | CCAGAAATTTTGAATAGTGT+GGG | + | chr6.3:80348690-80348709 | MS.gene61384:intron | 30.0% |
| ! | CTAAACAATTAGCTCTTTCA+AGG | - | chr6.3:80345831-80345850 | None:intergenic | 30.0% |
| ! | CTAATTGTTTAGCTTCAATG+TGG | + | chr6.3:80345839-80345858 | MS.gene61384:CDS | 30.0% |
| ! | GATTTCCCAAATATTTGTTG+TGG | - | chr6.3:80348076-80348095 | None:intergenic | 30.0% |
| ! | TCCAGAAATTTTGAATAGTG+TGG | + | chr6.3:80348689-80348708 | MS.gene61384:intron | 30.0% |
| !! | AATACAGTGGAATTTGTTGA+TGG | + | chr6.3:80349317-80349336 | MS.gene61384:CDS | 30.0% |
| !! | ATACAGTGGAATTTGTTGAT+GGG | + | chr6.3:80349318-80349337 | MS.gene61384:CDS | 30.0% |
| !! | CCATTTGTTTTTCAAAGGTA+CGG | + | chr6.3:80347116-80347135 | MS.gene61384:intron | 30.0% |
| !! | TTGATGTTGTTTGTGGATTT+TGG | + | chr6.3:80346049-80346068 | MS.gene61384:CDS | 30.0% |
| !! | TTTTAGTTATCCTGACACAA+AGG | - | chr6.3:80347322-80347341 | None:intergenic | 30.0% |
| !!! | CTTTAGTTCTTTTTAGTTCG+TGG | + | chr6.3:80346478-80346497 | MS.gene61384:intron | 30.0% |
| !!! | TTAATCTGTGTTTTGATCCA+CGG | + | chr6.3:80348441-80348460 | MS.gene61384:intron | 30.0% |
| AAATAGCCACACAAATTTGG+AGG | + | chr6.3:80346436-80346455 | MS.gene61384:intron | 35.0% | |
| AAATGGATGGAAAGGAGAAA+AGG | + | chr6.3:80350140-80350159 | MS.gene61384:CDS | 35.0% | |
| AAATGGTTGATTGTTGCTAG+TGG | + | chr6.3:80346132-80346151 | MS.gene61384:CDS | 35.0% | |
| AACTAGCTGGAAATCTGTTA+AGG | + | chr6.3:80350242-80350261 | MS.gene61384:CDS | 35.0% | |
| AAGAATGAAATGTTAACCGG+TGG | + | chr6.3:80347358-80347377 | MS.gene61384:intron | 35.0% | |
| AAGTTGTGCCTCAAATTGAA+GGG | + | chr6.3:80346169-80346188 | MS.gene61384:CDS | 35.0% | |
| AATATTGTCGAGTTCATGGA+CGG | - | chr6.3:80349110-80349129 | None:intergenic | 35.0% | |
| AATCGGATGTGAAATCGAAT+AGG | - | chr6.3:80348907-80348926 | None:intergenic | 35.0% | |
| AATGGATGGAAAGGAGAAAA+GGG | + | chr6.3:80350141-80350160 | MS.gene61384:CDS | 35.0% | |
| ACAGTAGCTCAAATCAAAAC+TGG | + | chr6.3:80348277-80348296 | MS.gene61384:CDS | 35.0% | |
| ACCACTTGTTTGCCAAAAAT+AGG | - | chr6.3:80346018-80346037 | None:intergenic | 35.0% | |
| AGAACACTTGAAAATCGGAA+AGG | - | chr6.3:80346759-80346778 | None:intergenic | 35.0% | |
| AGGAAATTGTAGACACACTA+TGG | - | chr6.3:80347554-80347573 | None:intergenic | 35.0% | |
| ATATACGTGTAGGTTTGCAA+GGG | + | chr6.3:80349275-80349294 | MS.gene61384:intron | 35.0% | |
| ATCATAGAGGACAACTATGA+TGG | - | chr6.3:80348783-80348802 | None:intergenic | 35.0% | |
| ATCCTTAGTGGTTAGAGATA+CGG | + | chr6.3:80346335-80346354 | MS.gene61384:CDS | 35.0% | |
| ATGCAAGTTAAAGCATGTGT+GGG | - | chr6.3:80349087-80349106 | None:intergenic | 35.0% | |
| CAATTCTCTCAGATGTCAAT+TGG | + | chr6.3:80347674-80347693 | MS.gene61384:intron | 35.0% | |
| CAGAAGATATTGAAACTAGC+TGG | + | chr6.3:80350229-80350248 | MS.gene61384:CDS | 35.0% | |
| CCCACACTATTCAAAATTTC+TGG | - | chr6.3:80348693-80348712 | None:intergenic | 35.0% | |
| CTTGGAGATACATCTCAATT+TGG | + | chr6.3:80348181-80348200 | MS.gene61384:CDS | 35.0% | |
| CTTTGTTCTCTCACTTTCAT+TGG | + | chr6.3:80347212-80347231 | MS.gene61384:intron | 35.0% | |
| GAAAGTGAGAGAACAAAGAA+TGG | - | chr6.3:80347210-80347229 | None:intergenic | 35.0% | |
| GACATGTTTAGTGAGAAAGA+TGG | + | chr6.3:80350096-80350115 | MS.gene61384:CDS | 35.0% | |
| GCAGCATGTCTTAAACAAAA+AGG | + | chr6.3:80345790-80345809 | MS.gene61384:CDS | 35.0% | |
| GGAAAAAACAATACTCCCTT+CGG | - | chr6.3:80346738-80346757 | None:intergenic | 35.0% | |
| GGAAGTTGACAAAATTGCTT+TGG | - | chr6.3:80345901-80345920 | None:intergenic | 35.0% | |
| GTTCATCTATTGATGCAAAG+AGG | + | chr6.3:80350202-80350221 | MS.gene61384:CDS | 35.0% | |
| GTTTCAGGACCAATTATAGT+TGG | + | chr6.3:80345742-80345761 | MS.gene61384:CDS | 35.0% | |
| TATATACGTGTAGGTTTGCA+AGG | + | chr6.3:80349274-80349293 | MS.gene61384:intron | 35.0% | |
| TCATAGAGGACAACTATGAT+GGG | - | chr6.3:80348782-80348801 | None:intergenic | 35.0% | |
| TGCTTATAAAAGTGATCGGA+TGG | - | chr6.3:80347857-80347876 | None:intergenic | 35.0% | |
| TTCTTATAACAAGAACCGGA+GGG | - | chr6.3:80346603-80346622 | None:intergenic | 35.0% | |
| TTTCTCCTTTCCATCCATTT+GGG | - | chr6.3:80350140-80350159 | None:intergenic | 35.0% | |
| TTTCTTATAACAAGAACCGG+AGG | - | chr6.3:80346604-80346623 | None:intergenic | 35.0% | |
| ! | AAAATAAACTTTTGCCACCG+TGG | - | chr6.3:80348461-80348480 | None:intergenic | 35.0% |
| ! | ATGGTTCTCTGTTCATTTTG+TGG | + | chr6.3:80348126-80348145 | MS.gene61384:CDS | 35.0% |
| ! | CCGTACCTTTGAAAAACAAA+TGG | - | chr6.3:80347119-80347138 | None:intergenic | 35.0% |
| ! | CTCTTATGCCATTTCCAAAA+GGG | + | chr6.3:80345920-80345939 | MS.gene61384:CDS | 35.0% |
| ! | GCTGAATTTGATGTTGTTTG+TGG | + | chr6.3:80346042-80346061 | MS.gene61384:CDS | 35.0% |
| ! | TTTTCTCCTTTCCATCCATT+TGG | - | chr6.3:80350141-80350160 | None:intergenic | 35.0% |
| !! | TGTTGCTTTGTTGGATATGA+TGG | - | chr6.3:80345949-80345968 | None:intergenic | 35.0% |
| !! | TTGTGGGAAGAATGTTTTAG+TGG | + | chr6.3:80346251-80346270 | MS.gene61384:CDS | 35.0% |
| !!! | AGCTCTAAAGGACCAATTTT+TGG | - | chr6.3:80348217-80348236 | None:intergenic | 35.0% |
| !!! | TCCTATTTTTGGCAAACAAG+TGG | + | chr6.3:80346014-80346033 | MS.gene61384:CDS | 35.0% |
| !!! | TCTTTTTGGGTCTTGTTAAC+CGG | - | chr6.3:80347523-80347542 | None:intergenic | 35.0% |
| ACAATATCAAACTAGGTGCG+TGG | - | chr6.3:80349946-80349965 | None:intergenic | 40.0% | |
| ACGACTAGCACATAATACAG+TGG | + | chr6.3:80349304-80349323 | MS.gene61384:CDS | 40.0% | |
| CAATGTACCCACTTGGTTAA+AGG | + | chr6.3:80349388-80349407 | MS.gene61384:CDS | 40.0% | |
| CTAAGGATGGATGAGCATTA+TGG | - | chr6.3:80346323-80346342 | None:intergenic | 40.0% | |
| GAAAAGGGACTATATGCTGT+TGG | + | chr6.3:80350156-80350175 | MS.gene61384:CDS | 40.0% | |
| GAAATCGAATAGGAGATGAC+TGG | - | chr6.3:80348897-80348916 | None:intergenic | 40.0% | |
| GAAGGGATGGAACAATTTCA+AGG | + | chr6.3:80346186-80346205 | MS.gene61384:CDS | 40.0% | |
| GAAGTTGTGCCTCAAATTGA+AGG | + | chr6.3:80346168-80346187 | MS.gene61384:CDS | 40.0% | |
| GATGCAAGTTAAAGCATGTG+TGG | - | chr6.3:80349088-80349107 | None:intergenic | 40.0% | |
| GCATAAAATCATACTCCCTC+CGG | + | chr6.3:80346585-80346604 | MS.gene61384:intron | 40.0% | |
| GCGTGGATATAAATCATAGG+CGG | - | chr6.3:80349929-80349948 | None:intergenic | 40.0% | |
| GCTCTTTCAAGGATTTGACT+TGG | - | chr6.3:80345820-80345839 | None:intergenic | 40.0% | |
| GGCACATGATCATCAAAAGA+AGG | + | chr6.3:80345696-80345715 | MS.gene61384:CDS | 40.0% | |
| GGTGCGTGGATATAAATCAT+AGG | - | chr6.3:80349932-80349951 | None:intergenic | 40.0% | |
| GTATCTCTAACCACTAAGGA+TGG | - | chr6.3:80346336-80346355 | None:intergenic | 40.0% | |
| TAATGCTCATCCATCCTTAG+TGG | + | chr6.3:80346323-80346342 | MS.gene61384:CDS | 40.0% | |
| TGTTCCATCCCTTCAATTTG+AGG | - | chr6.3:80346180-80346199 | None:intergenic | 40.0% | |
| TTGGCAACGTGGTATTTGTT+TGG | + | chr6.3:80347615-80347634 | MS.gene61384:intron | 40.0% | |
| TTTCAGCCTCCAAATTTGTG+TGG | - | chr6.3:80346445-80346464 | None:intergenic | 40.0% | |
| ! | AAGAGTGGTAGCATGTTTTG+TGG | + | chr6.3:80346234-80346253 | MS.gene61384:CDS | 40.0% |
| ! | AGAGTGGTAGCATGTTTTGT+GGG | + | chr6.3:80346235-80346254 | MS.gene61384:CDS | 40.0% |
| ! | ATGAAGCACCTTTAACCAAG+TGG | - | chr6.3:80349399-80349418 | None:intergenic | 40.0% |
| ! | CCTCTTATGCCATTTCCAAA+AGG | + | chr6.3:80345919-80345938 | MS.gene61384:CDS | 40.0% |
| ! | GATGCTATCATTCTAGCTAC+TGG | + | chr6.3:80349356-80349375 | MS.gene61384:CDS | 40.0% |
| ! | GGATATGATGGTAACCCTTT+TGG | - | chr6.3:80345937-80345956 | None:intergenic | 40.0% |
| ! | GTGAGAAAGATGGTTTTCCA+AGG | + | chr6.3:80350106-80350125 | MS.gene61384:CDS | 40.0% |
| ! | GTGGTATTTGTTTGGAGTCT+GGG | + | chr6.3:80347623-80347642 | MS.gene61384:intron | 40.0% |
| ! | TGAAGCACCTTTAACCAAGT+GGG | - | chr6.3:80349398-80349417 | None:intergenic | 40.0% |
| !! | AAGACACCTGTTTTGGATGT+TGG | + | chr6.3:80348253-80348272 | MS.gene61384:CDS | 40.0% |
| !! | AGACACCTGTTTTGGATGTT+GGG | + | chr6.3:80348254-80348273 | MS.gene61384:CDS | 40.0% |
| !! | CCTTTTGGAAATGGCATAAG+AGG | - | chr6.3:80345922-80345941 | None:intergenic | 40.0% |
| !! | CTGTTGGTTTCACTAAACGT+GGG | + | chr6.3:80350172-80350191 | MS.gene61384:CDS | 40.0% |
| !! | GATGGTAACCCTTTTGGAAA+TGG | - | chr6.3:80345931-80345950 | None:intergenic | 40.0% |
| !! | GGAATTTGTTGATGGGAAAG+TGG | + | chr6.3:80349325-80349344 | MS.gene61384:CDS | 40.0% |
| !!! | GGAAGAATGTTTTAGTGGTG+GGG | + | chr6.3:80346256-80346275 | MS.gene61384:CDS | 40.0% |
| !!! | GGGAAGAATGTTTTAGTGGT+GGG | + | chr6.3:80346255-80346274 | MS.gene61384:CDS | 40.0% |
| !!! | TGATTTTTTAACCAGTGCCC+CGG | - | chr6.3:80347386-80347405 | None:intergenic | 40.0% |
| !!! | TGGGAAGAATGTTTTAGTGG+TGG | + | chr6.3:80346254-80346273 | MS.gene61384:CDS | 40.0% |
| ACAGAAGCAATGTACCCACT+TGG | + | chr6.3:80349381-80349400 | MS.gene61384:CDS | 45.0% | |
| ACTGTCCCAACATCCAAAAC+AGG | - | chr6.3:80348262-80348281 | None:intergenic | 45.0% | |
| CACCGTATCTCTAACCACTA+AGG | - | chr6.3:80346340-80346359 | None:intergenic | 45.0% | |
| CCTTTCCATCCATTTGGGAA+CGG | - | chr6.3:80350135-80350154 | None:intergenic | 45.0% | |
| GGACCAATTATAGTTGGAGC+TGG | + | chr6.3:80345748-80345767 | MS.gene61384:CDS | 45.0% | |
| GGACCAGCTCCAACTATAAT+TGG | - | chr6.3:80345754-80345773 | None:intergenic | 45.0% | |
| GTGCTCTTTCTCGAAGTCTT+AGG | + | chr6.3:80347649-80347668 | MS.gene61384:intron | 45.0% | |
| TAGTTTCCTTAACCAGTGCC+CGG | + | chr6.3:80347492-80347511 | MS.gene61384:intron | 45.0% | |
| TGCTAGTGGTGAAAATGCTG+AGG | + | chr6.3:80346146-80346165 | MS.gene61384:CDS | 45.0% | |
| TGTGCCTCAAATTGAAGGGA+TGG | + | chr6.3:80346173-80346192 | MS.gene61384:CDS | 45.0% | |
| ! | CGTGGTATTTGTTTGGAGTC+TGG | + | chr6.3:80347622-80347641 | MS.gene61384:intron | 45.0% |
| ! | TTCACTAAACGTGGGTTGCT+TGG | + | chr6.3:80350180-80350199 | MS.gene61384:CDS | 45.0% |
| ! | TTCAGGCATGGAGGTTTGTT+TGG | + | chr6.3:80346287-80346306 | MS.gene61384:CDS | 45.0% |
| !! | GCTGTTGGTTTCACTAAACG+TGG | + | chr6.3:80350171-80350190 | MS.gene61384:CDS | 45.0% |
| !! | GTCTTGTTAACCGGTTTTCC+CGG | - | chr6.3:80347514-80347533 | None:intergenic | 45.0% |
| !! | TCACTGCTCGAGTTGAATTG+TGG | - | chr6.3:80348665-80348684 | None:intergenic | 45.0% |
| !! | TCTTGTTAACCGGTTTTCCC+GGG | - | chr6.3:80347513-80347532 | None:intergenic | 45.0% |
| !!! | AATGTTTTAGTGGTGGGGTG+TGG | + | chr6.3:80346261-80346280 | MS.gene61384:CDS | 45.0% |
| !!! | ATCTGTGTTTTGATCCACGG+TGG | + | chr6.3:80348444-80348463 | MS.gene61384:intron | 45.0% |
| AAATGTTAACCGGTGGCTCC+GGG | + | chr6.3:80347365-80347384 | MS.gene61384:intron | 50.0% | |
| AGTTTCCTTAACCAGTGCCC+GGG | + | chr6.3:80347493-80347512 | MS.gene61384:intron | 50.0% | |
| CCAAGGAAACCGTTCCCAAA+TGG | + | chr6.3:80350123-80350142 | MS.gene61384:CDS | 50.0% | |
| CCATTTGGGAACGGTTTCCT+TGG | - | chr6.3:80350126-80350145 | None:intergenic | 50.0% | |
| CCGTTCCCAAATGGATGGAA+AGG | + | chr6.3:80350132-80350151 | MS.gene61384:CDS | 50.0% | |
| CTGCAAAGAGCCTTTGTGTC+AGG | + | chr6.3:80347309-80347328 | MS.gene61384:intron | 50.0% | |
| GAAATGTTAACCGGTGGCTC+CGG | + | chr6.3:80347364-80347383 | MS.gene61384:intron | 50.0% | |
| GGAAACCGTTCCCAAATGGA+TGG | + | chr6.3:80350127-80350146 | MS.gene61384:CDS | 50.0% | |
| GTCTCTTAACCCACTTGCGT+TGG | + | chr6.3:80347596-80347615 | MS.gene61384:intron | 50.0% | |
| GTGTGGAAATTCAGGCATGG+AGG | + | chr6.3:80346278-80346297 | MS.gene61384:CDS | 50.0% | |
| ! | GTACGGCAAGACACCTGTTT+TGG | + | chr6.3:80348246-80348265 | MS.gene61384:CDS | 50.0% |
| AATGTTAACCGGTGGCTCCG+GGG | + | chr6.3:80347366-80347385 | MS.gene61384:intron | 55.0% | |
| ACCACGTTGCCAACGCAAGT+GGG | - | chr6.3:80347608-80347627 | None:intergenic | 55.0% | |
| ATAGTTGGAGCTGGTCCCTC+AGG | + | chr6.3:80345757-80345776 | MS.gene61384:CDS | 55.0% | |
| GCTGCTGCTGCTAATCCTGA+GGG | - | chr6.3:80345775-80345794 | None:intergenic | 55.0% | |
| GGGGTGTGGAAATTCAGGCA+TGG | + | chr6.3:80346275-80346294 | MS.gene61384:CDS | 55.0% | |
| TAACCAGTGCCCGGGAAAAC+CGG | + | chr6.3:80347501-80347520 | MS.gene61384:intron | 55.0% | |
| TACCACGTTGCCAACGCAAG+TGG | - | chr6.3:80347609-80347628 | None:intergenic | 55.0% | |
| TGCTGCTGCTGCTAATCCTG+AGG | - | chr6.3:80345776-80345795 | None:intergenic | 55.0% | |
| ! | GTGGTGGGGTGTGGAAATTC+AGG | + | chr6.3:80346270-80346289 | MS.gene61384:CDS | 55.0% |
| !!! | GTTTTCCCGGGCACTGGTTA+AGG | - | chr6.3:80347501-80347520 | None:intergenic | 55.0% |
| ! | ACCCACTTGCGTTGGCAACG+TGG | + | chr6.3:80347604-80347623 | MS.gene61384:intron | 60.0% |
| !! | TAACCGGTTTTCCCGGGCAC+TGG | - | chr6.3:80347507-80347526 | None:intergenic | 60.0% |
| AACCAGTGCCCCGGAGCCAC+CGG | - | chr6.3:80347377-80347396 | None:intergenic | 70.0% | |
| AACCGGTGGCTCCGGGGCAC+TGG | + | chr6.3:80347372-80347391 | MS.gene61384:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 80345694 | 80350281 | 80345694 | ID=MS.gene61384 |
| chr6.3 | mRNA | 80345694 | 80350281 | 80345694 | ID=MS.gene61384.t1;Parent=MS.gene61384 |
| chr6.3 | exon | 80345694 | 80346356 | 80345694 | ID=MS.gene61384.t1.exon1;Parent=MS.gene61384.t1 |
| chr6.3 | CDS | 80345694 | 80346356 | 80345694 | ID=cds.MS.gene61384.t1;Parent=MS.gene61384.t1 |
| chr6.3 | exon | 80348061 | 80348309 | 80348061 | ID=MS.gene61384.t1.exon2;Parent=MS.gene61384.t1 |
| chr6.3 | CDS | 80348061 | 80348309 | 80348061 | ID=cds.MS.gene61384.t1;Parent=MS.gene61384.t1 |
| chr6.3 | exon | 80349287 | 80349409 | 80349287 | ID=MS.gene61384.t1.exon3;Parent=MS.gene61384.t1 |
| chr6.3 | CDS | 80349287 | 80349409 | 80349287 | ID=cds.MS.gene61384.t1;Parent=MS.gene61384.t1 |
| chr6.3 | exon | 80350090 | 80350281 | 80350090 | ID=MS.gene61384.t1.exon4;Parent=MS.gene61384.t1 |
| chr6.3 | CDS | 80350090 | 80350281 | 80350090 | ID=cds.MS.gene61384.t1;Parent=MS.gene61384.t1 |
| Gene Sequence |
| Protein sequence |
