Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05549.t1 | KEH27129.1 | 98 | 407 | 8 | 0 | 1 | 407 | 1 | 407 | 1.90E-235 | 824.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05549.t1 | Q9SVQ1 | 67.7 | 384 | 121 | 2 | 13 | 396 | 21 | 401 | 3.3e-156 | 552.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05549.t1 | A0A072UBE4 | 98.0 | 407 | 8 | 0 | 1 | 407 | 1 | 407 | 1.4e-235 | 824.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052459 | MS.gene05549 | 0.912057 | 3.01E-83 | -1.69E-46 |
| MS.gene05549 | MS.gene51789 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene05549 | MS.gene61384 | 0.937571 | 2.79E-98 | -1.69E-46 |
| MS.gene05549 | MS.gene86140 | 0.801011 | 1.10E-48 | -1.69E-46 |
| MS.gene05549 | MS.gene95624 | 0.810524 | 1.10E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05549.t1 | MTR_6g086870 | 97.794 | 408 | 9 | 0 | 1 | 408 | 1 | 408 | 0.0 | 823 |
| MS.gene05549.t1 | MTR_1g008380 | 68.380 | 389 | 119 | 2 | 13 | 401 | 35 | 419 | 0.0 | 563 |
| MS.gene05549.t1 | MTR_3g109520 | 67.254 | 397 | 127 | 1 | 5 | 401 | 24 | 417 | 0.0 | 562 |
| MS.gene05549.t1 | MTR_1g011630 | 60.406 | 394 | 148 | 3 | 12 | 405 | 8 | 393 | 0.0 | 514 |
| MS.gene05549.t1 | MTR_1g069275 | 59.548 | 398 | 154 | 4 | 4 | 400 | 9 | 400 | 3.39e-177 | 501 |
| MS.gene05549.t1 | MTR_1g046230 | 58.247 | 388 | 160 | 2 | 13 | 400 | 17 | 402 | 2.65e-176 | 498 |
| MS.gene05549.t1 | MTR_7g099330 | 56.533 | 398 | 161 | 4 | 4 | 400 | 9 | 395 | 2.31e-168 | 478 |
| MS.gene05549.t1 | MTR_7g099160 | 54.459 | 314 | 132 | 3 | 88 | 400 | 213 | 516 | 4.99e-121 | 362 |
| MS.gene05549.t1 | MTR_8g432640 | 44.063 | 379 | 203 | 3 | 21 | 398 | 7 | 377 | 3.49e-118 | 349 |
| MS.gene05549.t1 | MTR_7g107690 | 44.180 | 378 | 202 | 4 | 21 | 397 | 9 | 378 | 7.55e-118 | 348 |
| MS.gene05549.t1 | MTR_5g033260 | 45.669 | 381 | 196 | 4 | 21 | 399 | 7 | 378 | 1.23e-116 | 345 |
| MS.gene05549.t1 | MTR_7g107710 | 46.950 | 377 | 189 | 6 | 21 | 395 | 7 | 374 | 1.16e-115 | 343 |
| MS.gene05549.t1 | MTR_3g088925 | 43.490 | 384 | 208 | 3 | 21 | 403 | 8 | 383 | 2.22e-112 | 335 |
| MS.gene05549.t1 | MTR_3g088945 | 43.229 | 384 | 209 | 3 | 21 | 403 | 8 | 383 | 1.30e-111 | 333 |
| MS.gene05549.t1 | MTR_3g088955 | 43.490 | 384 | 208 | 3 | 21 | 403 | 8 | 383 | 1.69e-111 | 333 |
| MS.gene05549.t1 | MTR_4g051642 | 43.702 | 389 | 206 | 5 | 21 | 408 | 8 | 384 | 4.89e-111 | 332 |
| MS.gene05549.t1 | MTR_3g096030 | 38.798 | 183 | 83 | 3 | 18 | 199 | 4 | 158 | 3.69e-36 | 130 |
| MS.gene05549.t1 | MTR_3g437580 | 24.658 | 219 | 129 | 8 | 22 | 207 | 15 | 230 | 2.90e-13 | 70.9 |
| MS.gene05549.t1 | MTR_3g437580 | 24.658 | 219 | 129 | 8 | 22 | 207 | 15 | 230 | 9.08e-13 | 70.1 |
| MS.gene05549.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 1.68e-12 | 67.8 |
| MS.gene05549.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 2.52e-12 | 67.8 |
| MS.gene05549.t1 | MTR_8g037910 | 25.822 | 213 | 125 | 7 | 22 | 208 | 6 | 211 | 5.77e-12 | 67.4 |
| MS.gene05549.t1 | MTR_8g037880 | 25.352 | 213 | 127 | 7 | 22 | 208 | 6 | 212 | 6.16e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05549.t1 | AT4G13260 | 67.532 | 385 | 122 | 2 | 12 | 396 | 20 | 401 | 0.0 | 555 |
| MS.gene05549.t1 | AT5G25620 | 63.433 | 402 | 140 | 2 | 1 | 400 | 13 | 409 | 0.0 | 543 |
| MS.gene05549.t1 | AT5G25620 | 63.433 | 402 | 140 | 2 | 1 | 400 | 13 | 409 | 0.0 | 542 |
| MS.gene05549.t1 | AT5G11320 | 58.673 | 392 | 152 | 2 | 8 | 399 | 5 | 386 | 1.19e-175 | 496 |
| MS.gene05549.t1 | AT1G04610 | 58.763 | 388 | 159 | 1 | 13 | 400 | 30 | 416 | 1.55e-173 | 492 |
| MS.gene05549.t1 | AT4G32540 | 56.250 | 400 | 165 | 3 | 2 | 400 | 3 | 393 | 2.33e-169 | 480 |
| MS.gene05549.t1 | AT4G32540 | 56.219 | 402 | 164 | 4 | 2 | 400 | 3 | 395 | 1.45e-167 | 476 |
| MS.gene05549.t1 | AT5G43890 | 56.298 | 389 | 166 | 3 | 13 | 400 | 18 | 403 | 8.95e-167 | 474 |
| MS.gene05549.t1 | AT4G28720 | 54.430 | 395 | 177 | 3 | 13 | 406 | 18 | 410 | 3.23e-166 | 473 |
| MS.gene05549.t1 | AT1G04180 | 56.555 | 389 | 162 | 4 | 13 | 400 | 18 | 400 | 4.68e-166 | 472 |
| MS.gene05549.t1 | AT2G33230 | 57.990 | 388 | 161 | 1 | 13 | 400 | 25 | 410 | 1.64e-165 | 471 |
| MS.gene05549.t1 | AT5G11320 | 58.284 | 338 | 132 | 1 | 8 | 345 | 5 | 333 | 2.20e-149 | 427 |
| MS.gene05549.t1 | AT4G13260 | 64.626 | 294 | 101 | 2 | 12 | 305 | 20 | 310 | 2.09e-142 | 408 |
| MS.gene05549.t1 | AT4G13260 | 67.123 | 292 | 93 | 2 | 106 | 397 | 11 | 299 | 1.41e-141 | 406 |
| MS.gene05549.t1 | AT1G21430 | 46.579 | 380 | 189 | 6 | 21 | 397 | 10 | 378 | 2.51e-121 | 357 |
| MS.gene05549.t1 | AT1G48910 | 43.229 | 384 | 209 | 3 | 21 | 403 | 6 | 381 | 2.64e-117 | 347 |
| MS.gene05549.t1 | AT1G19250 | 23.684 | 380 | 211 | 16 | 22 | 336 | 15 | 380 | 2.96e-14 | 74.7 |
| MS.gene05549.t1 | AT5G61290 | 26.941 | 219 | 127 | 6 | 22 | 209 | 18 | 234 | 5.11e-14 | 73.9 |
| MS.gene05549.t1 | AT1G65860 | 23.744 | 219 | 126 | 6 | 22 | 208 | 15 | 224 | 3.57e-13 | 71.2 |
| MS.gene05549.t1 | AT5G45180 | 23.864 | 352 | 205 | 16 | 22 | 336 | 15 | 340 | 7.80e-13 | 70.1 |
| MS.gene05549.t1 | AT1G62560 | 22.222 | 216 | 134 | 5 | 22 | 208 | 15 | 225 | 1.52e-12 | 68.9 |
| MS.gene05549.t1 | AT1G62560 | 22.222 | 216 | 134 | 5 | 22 | 208 | 15 | 225 | 2.07e-12 | 68.9 |
Find 82 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTATGTGGTTGCTTAAA+TGG | 0.146621 | 6.2:+85168933 | MS.gene05549:CDS |
| ATCTTGCCACAACAAATATT+TGG | 0.151089 | 6.2:+85168893 | MS.gene05549:CDS |
| TTGATGTTGTTTGTGGATTT+TGG | 0.180380 | 6.2:+85166833 | MS.gene05549:CDS |
| TTATTGAATATTTATGTAAA+TGG | 0.192064 | 6.2:+85166899 | MS.gene05549:CDS |
| CTTGGAGATACATCTCAATT+TGG | 0.240393 | 6.2:+85169007 | MS.gene05549:CDS |
| GTAAAATCAATATTGGTTTC+AGG | 0.248308 | 6.2:+85166511 | MS.gene05549:CDS |
| CTAATGTCAGATCTTATTCT+TGG | 0.255630 | 6.2:+85168989 | MS.gene05549:CDS |
| AATCAAAACTGGCAAAATTA+AGG | 0.280803 | 6.2:+85169114 | MS.gene05549:CDS |
| TCAAAACCTATGATAGATTA+AGG | 0.300700 | 6.2:+85166650 | MS.gene05549:CDS |
| TTCAGGCATGGAGGTTTGTT+TGG | 0.304733 | 6.2:+85167071 | MS.gene05549:CDS |
| GTGGTGGGGTGTGGAAATTC+AGG | 0.309535 | 6.2:+85167054 | MS.gene05549:CDS |
| GGACCAGCTCCAACTATAAT+TGG | 0.317043 | 6.2:-85166535 | None:intergenic |
| TACAAACTAGTATGCAAAAT+TGG | 0.319837 | 6.2:-85166994 | None:intergenic |
| TTTCTCCTTTCCATCCATTT+GGG | 0.321282 | 6.2:-85170904 | None:intergenic |
| CAATGTACCCACTTGGTTAA+AGG | 0.324458 | 6.2:+85170167 | MS.gene05549:CDS |
| GGATATGATGGTAACCCTTT+TGG | 0.329198 | 6.2:-85166718 | None:intergenic |
| TAGCATAGTAAAATCAATAT+TGG | 0.331896 | 6.2:+85166504 | MS.gene05549:CDS |
| CTAAACAATTAGCTCTTTCA+AGG | 0.332301 | 6.2:-85166612 | None:intergenic |
| GCAGCATGTCTTAAACAAAA+AGG | 0.336756 | 6.2:+85166574 | MS.gene05549:CDS |
| GTACGGCAAGACACCTGTTT+TGG | 0.342983 | 6.2:+85169072 | MS.gene05549:CDS |
| ATATTTGGGAAATCAACTTT+TGG | 0.368442 | 6.2:+85168908 | MS.gene05549:CDS |
| GGAAGTTGACAAAATTGCTT+TGG | 0.369775 | 6.2:-85166682 | None:intergenic |
| GCTGAATTTGATGTTGTTTG+TGG | 0.371638 | 6.2:+85166826 | MS.gene05549:CDS |
| TCTTGCCACAACAAATATTT+GGG | 0.374850 | 6.2:+85168894 | MS.gene05549:CDS |
| CCATTTGGGAACGGTTTCCT+TGG | 0.378581 | 6.2:-85170890 | None:intergenic |
| ATGAAGCCTTAATCTATCAT+AGG | 0.395063 | 6.2:-85166656 | None:intergenic |
| TGTTCCATCCCTTCAATTTG+AGG | 0.407826 | 6.2:-85166961 | None:intergenic |
| AATACAGTGGAATTTGTTGA+TGG | 0.421286 | 6.2:+85170096 | MS.gene05549:CDS |
| CTCTTATGCCATTTCCAAAA+GGG | 0.422373 | 6.2:+85166704 | MS.gene05549:CDS |
| CCTCTTATGCCATTTCCAAA+AGG | 0.423790 | 6.2:+85166703 | MS.gene05549:CDS |
| CTAAGGATGGATGAGCATTA+TGG | 0.423920 | 6.2:-85167104 | None:intergenic |
| GTTTCAGGACCAATTATAGT+TGG | 0.432090 | 6.2:+85166526 | MS.gene05549:CDS |
| TTCACTAAACGTGGGTTGCT+TGG | 0.432993 | 6.2:+85170947 | MS.gene05549:CDS |
| TGTTGCTTTGTTGGATATGA+TGG | 0.433600 | 6.2:-85166730 | None:intergenic |
| ACAGTAGCTCAAATCAAAAC+TGG | 0.443872 | 6.2:+85169103 | MS.gene05549:CDS |
| GATGCTATCATTCTAGCTAC+TGG | 0.448404 | 6.2:+85170135 | MS.gene05549:CDS |
| TAATGCTCATCCATCCTTAG+TGG | 0.456388 | 6.2:+85167107 | MS.gene05549:CDS |
| CAGAAGATATTGAAACTAGC+TGG | 0.460121 | 6.2:+85170996 | MS.gene05549:CDS |
| AAATGGATGGAAAGGAGAAA+AGG | 0.461272 | 6.2:+85170907 | MS.gene05549:CDS |
| ACATGTTTAGTGAGAAAGAT+GGG | 0.470084 | 6.2:+85170864 | MS.gene05549:CDS |
| ATAGTTGGAGCTGGTCCCTC+AGG | 0.471984 | 6.2:+85166541 | MS.gene05549:CDS |
| CCAAGGAAACCGTTCCCAAA+TGG | 0.472025 | 6.2:+85170890 | MS.gene05549:CDS |
| TATATACGTGTAGGTTTGCA+AGG | 0.483343 | 6.2:+85170053 | MS.gene05549:intron |
| TCTAATTCATACAAGTGGCT+TGG | 0.484263 | 6.2:-85171032 | None:intergenic |
| AACTAGCTGGAAATCTGTTA+AGG | 0.485182 | 6.2:+85171009 | MS.gene05549:CDS |
| CCTTTCCATCCATTTGGGAA+CGG | 0.497265 | 6.2:-85170899 | None:intergenic |
| GAAGTTGTGCCTCAAATTGA+AGG | 0.497449 | 6.2:+85166952 | MS.gene05549:CDS |
| GAAGGGATGGAACAATTTCA+AGG | 0.500090 | 6.2:+85166970 | MS.gene05549:CDS |
| AATGGATGGAAAGGAGAAAA+GGG | 0.503618 | 6.2:+85170908 | MS.gene05549:CDS |
| ACTGTCCCAACATCCAAAAC+AGG | 0.506565 | 6.2:-85169085 | None:intergenic |
| ATCCTTAGTGGTTAGAGATA+CGG | 0.509760 | 6.2:+85167119 | MS.gene05549:CDS |
| GCTCTTTCAAGGATTTGACT+TGG | 0.513216 | 6.2:-85166601 | None:intergenic |
| ATGAAGCACCTTTAACCAAG+TGG | 0.526407 | 6.2:-85170175 | None:intergenic |
| GGAATTTGTTGATGGGAAAG+TGG | 0.531587 | 6.2:+85170104 | MS.gene05549:CDS |
| GGACCAATTATAGTTGGAGC+TGG | 0.539189 | 6.2:+85166532 | MS.gene05549:CDS |
| GGCACATGATCATCAAAAGA+AGG | 0.539333 | 6.2:+85166480 | MS.gene05549:CDS |
| CCGTTCCCAAATGGATGGAA+AGG | 0.540578 | 6.2:+85170899 | MS.gene05549:CDS |
| GACATGTTTAGTGAGAAAGA+TGG | 0.543024 | 6.2:+85170863 | MS.gene05549:CDS |
| GATTTCCCAAATATTTGTTG+TGG | 0.543307 | 6.2:-85168899 | None:intergenic |
| GTGAGAAAGATGGGTTTCCA+AGG | 0.543965 | 6.2:+85170873 | MS.gene05549:CDS |
| CACCGTATCTCTAACCACTA+AGG | 0.547811 | 6.2:-85167121 | None:intergenic |
| CATACTAGTTTGTATAAGAG+TGG | 0.551040 | 6.2:+85167003 | MS.gene05549:CDS |
| GAAAAGGGACTATATGCTGT+TGG | 0.553034 | 6.2:+85170923 | MS.gene05549:CDS |
| GTTCATCTATTGATGCAAAG+AGG | 0.556561 | 6.2:+85170969 | MS.gene05549:CDS |
| GGAAACCGTTCCCAAATGGA+TGG | 0.562029 | 6.2:+85170894 | MS.gene05549:CDS |
| TGTGCCTCAAATTGAAGGGA+TGG | 0.564740 | 6.2:+85166957 | MS.gene05549:CDS |
| GCTGTTGGTTTCACTAAACG+TGG | 0.580511 | 6.2:+85170938 | MS.gene05549:CDS |
| ATACAGTGGAATTTGTTGAT+GGG | 0.584603 | 6.2:+85170097 | MS.gene05549:CDS |
| TGCTGCTGCTGCTAATCCTG+AGG | 0.591531 | 6.2:-85166557 | None:intergenic |
| GTATCTCTAACCACTAAGGA+TGG | 0.609523 | 6.2:-85167117 | None:intergenic |
| AAGTTGTGCCTCAAATTGAA+GGG | 0.631817 | 6.2:+85166953 | MS.gene05549:CDS |
| TGAAGCACCTTTAACCAAGT+GGG | 0.640553 | 6.2:-85170174 | None:intergenic |
| ATATACGTGTAGGTTTGCAA+GGG | 0.641719 | 6.2:+85170054 | MS.gene05549:intron |
| GTGTGGAAATTCAGGCATGG+AGG | 0.642809 | 6.2:+85167062 | MS.gene05549:CDS |
| CTAATTGTTTAGCTTCAATG+TGG | 0.650137 | 6.2:+85166623 | MS.gene05549:CDS |
| ACAGAAGCAATGTACCCACT+TGG | 0.652396 | 6.2:+85170160 | MS.gene05549:CDS |
| GGGGTGTGGAAATTCAGGCA+TGG | 0.657648 | 6.2:+85167059 | MS.gene05549:CDS |
| GCTGCTGCTGCTAATCCTGA+GGG | 0.658588 | 6.2:-85166556 | None:intergenic |
| AAATGGTTGATTGTTGCTAG+TGG | 0.673168 | 6.2:+85166916 | MS.gene05549:CDS |
| CTGTTGGTTTCACTAAACGT+GGG | 0.687223 | 6.2:+85170939 | MS.gene05549:CDS |
| ACGACTAGCACATAATACAG+TGG | 0.706423 | 6.2:+85170083 | MS.gene05549:CDS |
| TGCTAGTGGTGAAAATGCTG+AGG | 0.712690 | 6.2:+85166930 | MS.gene05549:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATTGTAAAATA+AGG | - | chr6.2:85170484-85170503 | None:intergenic | 10.0% |
| !! | TTATTGAATATTTATGTAAA+TGG | + | chr6.2:85166899-85166918 | MS.gene05549:CDS | 10.0% |
| !! | TTGTTTAATTATTTATATAG+AGG | - | chr6.2:85169640-85169659 | None:intergenic | 10.0% |
| !! | TTGTTTATATTAAAATGATA+AGG | + | chr6.2:85167907-85167926 | MS.gene05549:intron | 10.0% |
| !!! | ATTAATTGTTTCTTATAATA+AGG | + | chr6.2:85167537-85167556 | MS.gene05549:intron | 10.0% |
| !!! | TAAAGAAAATAATCTTTTTA+GGG | - | chr6.2:85168833-85168852 | None:intergenic | 10.0% |
| !!! | TAAGAAACAATTAATTTTTT+TGG | - | chr6.2:85167532-85167551 | None:intergenic | 10.0% |
| !!! | TTAAAGAAAATAATCTTTTT+AGG | - | chr6.2:85168834-85168853 | None:intergenic | 10.0% |
| !! | CTTCATATAAGAATTAATTA+TGG | + | chr6.2:85169442-85169461 | MS.gene05549:intron | 15.0% |
| !! | TACATTATACTACTAAAAAA+AGG | + | chr6.2:85169808-85169827 | MS.gene05549:intron | 15.0% |
| !!! | ACAATTTTTATCTTACTTAA+AGG | + | chr6.2:85166750-85166769 | MS.gene05549:CDS | 15.0% |
| !!! | TAAGAAAAAGTTAACTTTTT+AGG | + | chr6.2:85167443-85167462 | MS.gene05549:intron | 15.0% |
| !!! | TTACATATAGTTGATAAATA+TGG | + | chr6.2:85170213-85170232 | MS.gene05549:intron | 15.0% |
| !!! | TTTGATATAAATCCTATTTT+TGG | + | chr6.2:85166787-85166806 | MS.gene05549:CDS | 15.0% |
| !!! | TTTTTTATTTTTATTTGTGC+AGG | + | chr6.2:85168865-85168884 | MS.gene05549:intron | 15.0% |
| !!! | TTTTTTTAAAAACTTTGTGT+AGG | + | chr6.2:85169832-85169851 | MS.gene05549:intron | 15.0% |
| !! | AAACCAGTCTAATTTAAAAA+TGG | + | chr6.2:85167713-85167732 | MS.gene05549:intron | 20.0% |
| !! | AAGAGATTTGATCTTTAATT+TGG | - | chr6.2:85168113-85168132 | None:intergenic | 20.0% |
| !! | ACACTTAACAAAATTAAAGA+TGG | - | chr6.2:85170434-85170453 | None:intergenic | 20.0% |
| !! | ACTCAAGAAATTATGAAAAA+TGG | + | chr6.2:85166865-85166884 | MS.gene05549:CDS | 20.0% |
| !! | ATAAATATGGTAAATAGCAT+AGG | + | chr6.2:85170226-85170245 | MS.gene05549:intron | 20.0% |
| !! | ATTAGAGACATCAAATTTAT+AGG | + | chr6.2:85167291-85167310 | MS.gene05549:intron | 20.0% |
| !! | ATTGAAATTCATTGTGATTA+GGG | + | chr6.2:85170836-85170855 | MS.gene05549:intron | 20.0% |
| !! | GAGTTGAATAAAAAAAACTA+AGG | + | chr6.2:85169380-85169399 | MS.gene05549:intron | 20.0% |
| !! | GTAAATGATAAACAATTTAC+AGG | + | chr6.2:85167749-85167768 | MS.gene05549:intron | 20.0% |
| !! | TAAGATAAGTACATTAAGTT+TGG | + | chr6.2:85167866-85167885 | MS.gene05549:intron | 20.0% |
| !! | TAGCATAGTAAAATCAATAT+TGG | + | chr6.2:85166504-85166523 | MS.gene05549:CDS | 20.0% |
| !! | TATTAGACAAAATCTAATGA+TGG | - | chr6.2:85170025-85170044 | None:intergenic | 20.0% |
| !! | TCTCACATAAAATAAAGATA+AGG | + | chr6.2:85170581-85170600 | MS.gene05549:intron | 20.0% |
| !! | TGATTATGAAGATGTAAAAT+TGG | - | chr6.2:85169924-85169943 | None:intergenic | 20.0% |
| !! | TGTTAATACAATATCAAACT+AGG | - | chr6.2:85170723-85170742 | None:intergenic | 20.0% |
| !! | TTAGAGACATCAAATTTATA+GGG | + | chr6.2:85167292-85167311 | MS.gene05549:intron | 20.0% |
| !! | TTCTTAAGATTTACTTCATT+TGG | - | chr6.2:85168774-85168793 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTCTATCTCTATT+TGG | + | chr6.2:85170496-85170515 | MS.gene05549:intron | 20.0% |
| !!! | ATTAGCTTCTTCAAAAAAAA+TGG | + | chr6.2:85168532-85168551 | MS.gene05549:intron | 20.0% |
| !!! | ATTTTGCTTATAAAAGTGAT+CGG | - | chr6.2:85168687-85168706 | None:intergenic | 20.0% |
| !!! | CCTTTTTTGATAATATGAAT+CGG | - | chr6.2:85169698-85169717 | None:intergenic | 20.0% |
| !!! | GTCTCTAGTTTTTTTTTTTA+GGG | - | chr6.2:85170318-85170337 | None:intergenic | 20.0% |
| !!! | GTTAACTTTTTCTTATAACA+AGG | - | chr6.2:85167438-85167457 | None:intergenic | 20.0% |
| !!! | TAACATTTTTTATGCTTTTG+AGG | - | chr6.2:85168274-85168293 | None:intergenic | 20.0% |
| !!! | TATGGCAATTATTTCTTTTT+GGG | - | chr6.2:85168362-85168381 | None:intergenic | 20.0% |
| !!! | TGTCTCTAGTTTTTTTTTTT+AGG | - | chr6.2:85170319-85170338 | None:intergenic | 20.0% |
| !!! | TTTTTAAATTAGACTGGTTT+AGG | - | chr6.2:85167713-85167732 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTGATTAAGAC+AGG | - | chr6.2:85169237-85169256 | None:intergenic | 20.0% |
| ! | AAAAAGAAGGAAATGTTAAC+CGG | + | chr6.2:85168181-85168200 | MS.gene05549:intron | 25.0% |
| ! | AAAAAGGTTGTTAAAGCAAA+TGG | + | chr6.2:85168400-85168419 | MS.gene05549:intron | 25.0% |
| ! | AAAGAAGTTAGTTGTAATGA+CGG | - | chr6.2:85167836-85167855 | None:intergenic | 25.0% |
| ! | AATCAAAACTGGCAAAATTA+AGG | + | chr6.2:85169114-85169133 | MS.gene05549:CDS | 25.0% |
| ! | AGCATGAAGAAAAAAAAAGA+AGG | + | chr6.2:85168168-85168187 | MS.gene05549:intron | 25.0% |
| ! | ATCATCTAATATATACGTGT+AGG | + | chr6.2:85170044-85170063 | MS.gene05549:intron | 25.0% |
| ! | CCGATTCATATTATCAAAAA+AGG | + | chr6.2:85169695-85169714 | MS.gene05549:intron | 25.0% |
| ! | GATTGAAATTCATTGTGATT+AGG | + | chr6.2:85170835-85170854 | MS.gene05549:intron | 25.0% |
| ! | GGCAATATTAAAAATCATAG+AGG | - | chr6.2:85169619-85169638 | None:intergenic | 25.0% |
| ! | GTAAAAGAACACTTGAAAAT+CGG | - | chr6.2:85167590-85167609 | None:intergenic | 25.0% |
| ! | TACAAACTAGTATGCAAAAT+TGG | - | chr6.2:85166997-85167016 | None:intergenic | 25.0% |
| ! | TCAAAACCTATGATAGATTA+AGG | + | chr6.2:85166650-85166669 | MS.gene05549:CDS | 25.0% |
| ! | TTAGAGCTTAAAAACTTGTA+CGG | + | chr6.2:85169055-85169074 | MS.gene05549:CDS | 25.0% |
| !! | AATAAGATGAAAAACCCTTT+TGG | - | chr6.2:85169168-85169187 | None:intergenic | 25.0% |
| !! | AATATTACACTCTATCGATT+TGG | + | chr6.2:85170672-85170691 | MS.gene05549:intron | 25.0% |
| !! | ATATTTGGGAAATCAACTTT+TGG | + | chr6.2:85168908-85168927 | MS.gene05549:CDS | 25.0% |
| !! | ATCACAAATCATTTTCTCTT+TGG | - | chr6.2:85169750-85169769 | None:intergenic | 25.0% |
| !! | CCATAAATTTTGAATAGTGT+GGG | + | chr6.2:85169515-85169534 | MS.gene05549:intron | 25.0% |
| !! | TCCATAAATTTTGAATAGTG+TGG | + | chr6.2:85169514-85169533 | MS.gene05549:intron | 25.0% |
| !! | TTTGCTTTAACAACCTTTTT+AGG | - | chr6.2:85168400-85168419 | None:intergenic | 25.0% |
| !! | TTTTGCTTATAAAAGTGATC+GGG | - | chr6.2:85168686-85168705 | None:intergenic | 25.0% |
| !!! | AAATAATCTTTTTAGGGAAC+TGG | - | chr6.2:85168827-85168846 | None:intergenic | 25.0% |
| !!! | AAGATCCATTTGTTTTTCAA+AGG | + | chr6.2:85167937-85167956 | MS.gene05549:intron | 25.0% |
| !!! | ATATTACACTCTATCGATTT+GGG | + | chr6.2:85170673-85170692 | MS.gene05549:intron | 25.0% |
| !!! | CTATGGCAATTATTTCTTTT+TGG | - | chr6.2:85168363-85168382 | None:intergenic | 25.0% |
| !!! | GATAAAAATTGTTGCTTTGT+TGG | - | chr6.2:85166742-85166761 | None:intergenic | 25.0% |
| !!! | GTAAAATCAATATTGGTTTC+AGG | + | chr6.2:85166511-85166530 | MS.gene05549:CDS | 25.0% |
| !!! | TACAAGTTTTTAAGCTCTAA+AGG | - | chr6.2:85169055-85169074 | None:intergenic | 25.0% |
| !!! | TGTCCATTTTTAAATTAGAC+TGG | - | chr6.2:85167719-85167738 | None:intergenic | 25.0% |
| AATTCTCTCAGATGTCAATT+GGG | + | chr6.2:85168501-85168520 | MS.gene05549:intron | 30.0% | |
| ACATACCAATCAAATCCAAA+AGG | + | chr6.2:85169150-85169169 | MS.gene05549:intron | 30.0% | |
| ACATGTTTAGTGAGAAAGAT+GGG | + | chr6.2:85170864-85170883 | MS.gene05549:CDS | 30.0% | |
| ATCTTGCCACAACAAATATT+TGG | + | chr6.2:85168893-85168912 | MS.gene05549:CDS | 30.0% | |
| ATGAAGCCTTAATCTATCAT+AGG | - | chr6.2:85166659-85166678 | None:intergenic | 30.0% | |
| CATACCAATCAAATCCAAAA+GGG | + | chr6.2:85169151-85169170 | MS.gene05549:intron | 30.0% | |
| CATAGGAAAGAGTTGAATTA+AGG | + | chr6.2:85170243-85170262 | MS.gene05549:intron | 30.0% | |
| CCCACACTATTCAAAATTTA+TGG | - | chr6.2:85169518-85169537 | None:intergenic | 30.0% | |
| CTAATGTCAGATCTTATTCT+TGG | + | chr6.2:85168989-85169008 | MS.gene05549:CDS | 30.0% | |
| CTGGTTAAGGAAACTAAAAA+AGG | - | chr6.2:85168314-85168333 | None:intergenic | 30.0% | |
| GATGTAAAATTGGTTATGAC+AGG | - | chr6.2:85169914-85169933 | None:intergenic | 30.0% | |
| GGAATTGAAAGACCAAAAAT+TGG | + | chr6.2:85169028-85169047 | MS.gene05549:CDS | 30.0% | |
| GTGTCTACAATTTCCTAAAA+AGG | + | chr6.2:85168384-85168403 | MS.gene05549:intron | 30.0% | |
| TAACAAGTGTCTTAAACAAG+TGG | + | chr6.2:85168560-85168579 | MS.gene05549:intron | 30.0% | |
| TAGTTGACAATTTGATCACA+TGG | - | chr6.2:85169784-85169803 | None:intergenic | 30.0% | |
| TATCTATGTGGTTGCTTAAA+TGG | + | chr6.2:85168933-85168952 | MS.gene05549:CDS | 30.0% | |
| TCTTGCCACAACAAATATTT+GGG | + | chr6.2:85168894-85168913 | MS.gene05549:CDS | 30.0% | |
| TTCTTATAATAAGGACCGAA+GGG | + | chr6.2:85167546-85167565 | MS.gene05549:intron | 30.0% | |
| TTGAAATAGCCACACAAATT+TGG | + | chr6.2:85167217-85167236 | MS.gene05549:intron | 30.0% | |
| TTTCTTATAATAAGGACCGA+AGG | + | chr6.2:85167545-85167564 | MS.gene05549:intron | 30.0% | |
| TTTGAATATTGTCGAGTTCA+TGG | - | chr6.2:85169891-85169910 | None:intergenic | 30.0% | |
| ! | AAAACCCTTTTGGATTTGAT+TGG | - | chr6.2:85169158-85169177 | None:intergenic | 30.0% |
| ! | CATACTAGTTTGTATAAGAG+TGG | + | chr6.2:85167003-85167022 | MS.gene05549:CDS | 30.0% |
| ! | CTAAACAATTAGCTCTTTCA+AGG | - | chr6.2:85166615-85166634 | None:intergenic | 30.0% |
| ! | CTAATTGTTTAGCTTCAATG+TGG | + | chr6.2:85166623-85166642 | MS.gene05549:CDS | 30.0% |
| ! | CTTTTTCTTATAACAAGGAC+TGG | - | chr6.2:85167433-85167452 | None:intergenic | 30.0% |
| ! | GATTTCCCAAATATTTGTTG+TGG | - | chr6.2:85168902-85168921 | None:intergenic | 30.0% |
| !! | AATACAGTGGAATTTGTTGA+TGG | + | chr6.2:85170096-85170115 | MS.gene05549:CDS | 30.0% |
| !! | ATACAGTGGAATTTGTTGAT+GGG | + | chr6.2:85170097-85170116 | MS.gene05549:CDS | 30.0% |
| !! | CCATTTGTTTTTCAAAGGTA+CGG | + | chr6.2:85167942-85167961 | MS.gene05549:intron | 30.0% |
| !! | TTGATGTTGTTTGTGGATTT+TGG | + | chr6.2:85166833-85166852 | MS.gene05549:CDS | 30.0% |
| !!! | ATCTCTCTCTTTTTTTCTCT+TGG | + | chr6.2:85169983-85170002 | MS.gene05549:intron | 30.0% |
| !!! | CAACTTTTGGTTTATCTATG+TGG | + | chr6.2:85168921-85168940 | MS.gene05549:CDS | 30.0% |
| !!! | CTTTAGTTCTTTTTAGTTCG+TGG | + | chr6.2:85167262-85167281 | MS.gene05549:intron | 30.0% |
| !!! | TTAATGTGTGTTTTGATCCA+CGG | + | chr6.2:85169266-85169285 | MS.gene05549:intron | 30.0% |
| !!! | TTCATGCTTTTTAGTTATCC+TGG | - | chr6.2:85168156-85168175 | None:intergenic | 30.0% |
| AAAATTTATGGATCCGTCAC+TGG | - | chr6.2:85169506-85169525 | None:intergenic | 35.0% | |
| AAATAGCCACACAAATTTGG+AGG | + | chr6.2:85167220-85167239 | MS.gene05549:intron | 35.0% | |
| AAATGGATGGAAAGGAGAAA+AGG | + | chr6.2:85170907-85170926 | MS.gene05549:CDS | 35.0% | |
| AAATGGTTGATTGTTGCTAG+TGG | + | chr6.2:85166916-85166935 | MS.gene05549:CDS | 35.0% | |
| AACTAGCTGGAAATCTGTTA+AGG | + | chr6.2:85171009-85171028 | MS.gene05549:CDS | 35.0% | |
| AAGTTGTGCCTCAAATTGAA+GGG | + | chr6.2:85166953-85166972 | MS.gene05549:CDS | 35.0% | |
| AATATTGTCGAGTTCATGGA+CGG | - | chr6.2:85169887-85169906 | None:intergenic | 35.0% | |
| AATCGGATGTGAAATCGAAT+AGG | - | chr6.2:85169681-85169700 | None:intergenic | 35.0% | |
| AATGGATGGAAAGGAGAAAA+GGG | + | chr6.2:85170908-85170927 | MS.gene05549:CDS | 35.0% | |
| ACAGTAGCTCAAATCAAAAC+TGG | + | chr6.2:85169103-85169122 | MS.gene05549:CDS | 35.0% | |
| ACCACTTGTTTGCCAAAAAT+AGG | - | chr6.2:85166802-85166821 | None:intergenic | 35.0% | |
| AGAACACTTGAAAATCGGAA+AGG | - | chr6.2:85167585-85167604 | None:intergenic | 35.0% | |
| AGGAAATTGTAGACACACTA+TGG | - | chr6.2:85168380-85168399 | None:intergenic | 35.0% | |
| ATATACGTGTAGGTTTGCAA+GGG | + | chr6.2:85170054-85170073 | MS.gene05549:intron | 35.0% | |
| ATCATAGAGGACAACTATGA+TGG | - | chr6.2:85169606-85169625 | None:intergenic | 35.0% | |
| ATCCTTAGTGGTTAGAGATA+CGG | + | chr6.2:85167119-85167138 | MS.gene05549:CDS | 35.0% | |
| ATGCAAGTTAAAGCATGTGT+GGG | - | chr6.2:85169864-85169883 | None:intergenic | 35.0% | |
| CAATTCTCTCAGATGTCAAT+TGG | + | chr6.2:85168500-85168519 | MS.gene05549:intron | 35.0% | |
| CAGAAGATATTGAAACTAGC+TGG | + | chr6.2:85170996-85171015 | MS.gene05549:CDS | 35.0% | |
| CTTGGAGATACATCTCAATT+TGG | + | chr6.2:85169007-85169026 | MS.gene05549:CDS | 35.0% | |
| CTTTGTTCTCTCACTTTCAT+TGG | + | chr6.2:85168038-85168057 | MS.gene05549:intron | 35.0% | |
| GAAAGTGAGAGAACAAAGAA+TGG | - | chr6.2:85168036-85168055 | None:intergenic | 35.0% | |
| GACATGTTTAGTGAGAAAGA+TGG | + | chr6.2:85170863-85170882 | MS.gene05549:CDS | 35.0% | |
| GCAGCATGTCTTAAACAAAA+AGG | + | chr6.2:85166574-85166593 | MS.gene05549:CDS | 35.0% | |
| GGAAAAAACAATACTCCCTT+CGG | - | chr6.2:85167564-85167583 | None:intergenic | 35.0% | |
| GGAAGTTGACAAAATTGCTT+TGG | - | chr6.2:85166685-85166704 | None:intergenic | 35.0% | |
| GTTCATCTATTGATGCAAAG+AGG | + | chr6.2:85170969-85170988 | MS.gene05549:CDS | 35.0% | |
| GTTTCAGGACCAATTATAGT+TGG | + | chr6.2:85166526-85166545 | MS.gene05549:CDS | 35.0% | |
| TATATACGTGTAGGTTTGCA+AGG | + | chr6.2:85170053-85170072 | MS.gene05549:intron | 35.0% | |
| TCATAGAGGACAACTATGAT+GGG | - | chr6.2:85169605-85169624 | None:intergenic | 35.0% | |
| TTCTTATAACAAGGACTGGA+GGG | - | chr6.2:85167429-85167448 | None:intergenic | 35.0% | |
| TTTCTCCTTTCCATCCATTT+GGG | - | chr6.2:85170907-85170926 | None:intergenic | 35.0% | |
| TTTCTTATAACAAGGACTGG+AGG | - | chr6.2:85167430-85167449 | None:intergenic | 35.0% | |
| ! | AAAATAAACTTTTGCCACCG+TGG | - | chr6.2:85169286-85169305 | None:intergenic | 35.0% |
| ! | ATGGTTCTCTGTTCATTTTG+TGG | + | chr6.2:85168952-85168971 | MS.gene05549:CDS | 35.0% |
| ! | CCGTACCTTTGAAAAACAAA+TGG | - | chr6.2:85167945-85167964 | None:intergenic | 35.0% |
| ! | CTCTTATGCCATTTCCAAAA+GGG | + | chr6.2:85166704-85166723 | MS.gene05549:CDS | 35.0% |
| ! | GCTGAATTTGATGTTGTTTG+TGG | + | chr6.2:85166826-85166845 | MS.gene05549:CDS | 35.0% |
| ! | TTTTCTCCTTTCCATCCATT+TGG | - | chr6.2:85170908-85170927 | None:intergenic | 35.0% |
| !! | TGTTGCTTTGTTGGATATGA+TGG | - | chr6.2:85166733-85166752 | None:intergenic | 35.0% |
| !! | TTGTGGGAAGAATGTTTTAG+TGG | + | chr6.2:85167035-85167054 | MS.gene05549:CDS | 35.0% |
| !! | TTTTAGTTATCCTGGCACAA+AGG | - | chr6.2:85168148-85168167 | None:intergenic | 35.0% |
| !!! | AGCTCTAAAGGACCAATTTT+TGG | - | chr6.2:85169043-85169062 | None:intergenic | 35.0% |
| !!! | TCCTATTTTTGGCAAACAAG+TGG | + | chr6.2:85166798-85166817 | MS.gene05549:CDS | 35.0% |
| !!! | TCTTTTTGGGTCTTGTTAAC+CGG | - | chr6.2:85168349-85168368 | None:intergenic | 35.0% |
| AAGAAGGAAATGTTAACCGG+TGG | + | chr6.2:85168184-85168203 | MS.gene05549:intron | 40.0% | |
| ACAATATCAAACTAGGTGCG+TGG | - | chr6.2:85170716-85170735 | None:intergenic | 40.0% | |
| ACGACTAGCACATAATACAG+TGG | + | chr6.2:85170083-85170102 | MS.gene05549:CDS | 40.0% | |
| CAATGTACCCACTTGGTTAA+AGG | + | chr6.2:85170167-85170186 | MS.gene05549:CDS | 40.0% | |
| CTAAGGATGGATGAGCATTA+TGG | - | chr6.2:85167107-85167126 | None:intergenic | 40.0% | |
| GAAAAGGGACTATATGCTGT+TGG | + | chr6.2:85170923-85170942 | MS.gene05549:CDS | 40.0% | |
| GAAATCGAATAGGAGATGAC+TGG | - | chr6.2:85169671-85169690 | None:intergenic | 40.0% | |
| GAAGGGATGGAACAATTTCA+AGG | + | chr6.2:85166970-85166989 | MS.gene05549:CDS | 40.0% | |
| GAAGTTGTGCCTCAAATTGA+AGG | + | chr6.2:85166952-85166971 | MS.gene05549:CDS | 40.0% | |
| GATGCAAGTTAAAGCATGTG+TGG | - | chr6.2:85169865-85169884 | None:intergenic | 40.0% | |
| GCGTGGATATAAATCATAGG+CGG | - | chr6.2:85170699-85170718 | None:intergenic | 40.0% | |
| GCTCTTTCAAGGATTTGACT+TGG | - | chr6.2:85166604-85166623 | None:intergenic | 40.0% | |
| GGCACATGATCATCAAAAGA+AGG | + | chr6.2:85166480-85166499 | MS.gene05549:CDS | 40.0% | |
| GGTGCGTGGATATAAATCAT+AGG | - | chr6.2:85170702-85170721 | None:intergenic | 40.0% | |
| GTATCTCTAACCACTAAGGA+TGG | - | chr6.2:85167120-85167139 | None:intergenic | 40.0% | |
| TAATGCTCATCCATCCTTAG+TGG | + | chr6.2:85167107-85167126 | MS.gene05549:CDS | 40.0% | |
| TGCTTATAAAAGTGATCGGG+TGG | - | chr6.2:85168683-85168702 | None:intergenic | 40.0% | |
| TGTTCCATCCCTTCAATTTG+AGG | - | chr6.2:85166964-85166983 | None:intergenic | 40.0% | |
| TTGGCAACGTGGTATTTGTT+TGG | + | chr6.2:85168441-85168460 | MS.gene05549:intron | 40.0% | |
| TTTCAGCCTCCAAATTTGTG+TGG | - | chr6.2:85167229-85167248 | None:intergenic | 40.0% | |
| ! | AAGAGTGGTAGCATGTTTTG+TGG | + | chr6.2:85167018-85167037 | MS.gene05549:CDS | 40.0% |
| ! | AGAGTGGTAGCATGTTTTGT+GGG | + | chr6.2:85167019-85167038 | MS.gene05549:CDS | 40.0% |
| ! | ATGAAGCACCTTTAACCAAG+TGG | - | chr6.2:85170178-85170197 | None:intergenic | 40.0% |
| ! | CCTCTTATGCCATTTCCAAA+AGG | + | chr6.2:85166703-85166722 | MS.gene05549:CDS | 40.0% |
| ! | GATGCTATCATTCTAGCTAC+TGG | + | chr6.2:85170135-85170154 | MS.gene05549:CDS | 40.0% |
| ! | GGATATGATGGTAACCCTTT+TGG | - | chr6.2:85166721-85166740 | None:intergenic | 40.0% |
| ! | GTGGTATTTGTTTGGAGTCT+GGG | + | chr6.2:85168449-85168468 | MS.gene05549:intron | 40.0% |
| ! | TGAAGCACCTTTAACCAAGT+GGG | - | chr6.2:85170177-85170196 | None:intergenic | 40.0% |
| !! | AAGACACCTGTTTTGGATGT+TGG | + | chr6.2:85169079-85169098 | MS.gene05549:CDS | 40.0% |
| !! | AGACACCTGTTTTGGATGTT+GGG | + | chr6.2:85169080-85169099 | MS.gene05549:CDS | 40.0% |
| !! | CCTTTTGGAAATGGCATAAG+AGG | - | chr6.2:85166706-85166725 | None:intergenic | 40.0% |
| !! | CTGTTGGTTTCACTAAACGT+GGG | + | chr6.2:85170939-85170958 | MS.gene05549:CDS | 40.0% |
| !! | GATGGTAACCCTTTTGGAAA+TGG | - | chr6.2:85166715-85166734 | None:intergenic | 40.0% |
| !! | GGAATTTGTTGATGGGAAAG+TGG | + | chr6.2:85170104-85170123 | MS.gene05549:CDS | 40.0% |
| !!! | GGAAGAATGTTTTAGTGGTG+GGG | + | chr6.2:85167040-85167059 | MS.gene05549:CDS | 40.0% |
| !!! | GGGAAGAATGTTTTAGTGGT+GGG | + | chr6.2:85167039-85167058 | MS.gene05549:CDS | 40.0% |
| !!! | TGGGAAGAATGTTTTAGTGG+TGG | + | chr6.2:85167038-85167057 | MS.gene05549:CDS | 40.0% |
| ACAGAAGCAATGTACCCACT+TGG | + | chr6.2:85170160-85170179 | MS.gene05549:CDS | 45.0% | |
| ACTGTCCCAACATCCAAAAC+AGG | - | chr6.2:85169088-85169107 | None:intergenic | 45.0% | |
| CAATTCAACTCGACCAGTGA+CGG | + | chr6.2:85169490-85169509 | MS.gene05549:intron | 45.0% | |
| CACCGTATCTCTAACCACTA+AGG | - | chr6.2:85167124-85167143 | None:intergenic | 45.0% | |
| CCTTTCCATCCATTTGGGAA+CGG | - | chr6.2:85170902-85170921 | None:intergenic | 45.0% | |
| GGACCAATTATAGTTGGAGC+TGG | + | chr6.2:85166532-85166551 | MS.gene05549:CDS | 45.0% | |
| GGACCAGCTCCAACTATAAT+TGG | - | chr6.2:85166538-85166557 | None:intergenic | 45.0% | |
| GTGCTCTTTCTCGAAGTCTT+AGG | + | chr6.2:85168475-85168494 | MS.gene05549:intron | 45.0% | |
| TAGTTTCCTTAACCAGTGCC+CGG | + | chr6.2:85168318-85168337 | MS.gene05549:intron | 45.0% | |
| TGATTTCTTAACCAGTGCCC+CGG | - | chr6.2:85168212-85168231 | None:intergenic | 45.0% | |
| TGCTAGTGGTGAAAATGCTG+AGG | + | chr6.2:85166930-85166949 | MS.gene05549:CDS | 45.0% | |
| TGTGCCTCAAATTGAAGGGA+TGG | + | chr6.2:85166957-85166976 | MS.gene05549:CDS | 45.0% | |
| ! | CGTGGTATTTGTTTGGAGTC+TGG | + | chr6.2:85168448-85168467 | MS.gene05549:intron | 45.0% |
| ! | GTGAGAAAGATGGGTTTCCA+AGG | + | chr6.2:85170873-85170892 | MS.gene05549:CDS | 45.0% |
| ! | TTCACTAAACGTGGGTTGCT+TGG | + | chr6.2:85170947-85170966 | MS.gene05549:CDS | 45.0% |
| ! | TTCAGGCATGGAGGTTTGTT+TGG | + | chr6.2:85167071-85167090 | MS.gene05549:CDS | 45.0% |
| !! | GCTGTTGGTTTCACTAAACG+TGG | + | chr6.2:85170938-85170957 | MS.gene05549:CDS | 45.0% |
| !! | TCACTGGTCGAGTTGAATTG+TGG | - | chr6.2:85169490-85169509 | None:intergenic | 45.0% |
| !!! | AATGTTTTAGTGGTGGGGTG+TGG | + | chr6.2:85167045-85167064 | MS.gene05549:CDS | 45.0% |
| !!! | ATGTGTGTTTTGATCCACGG+TGG | + | chr6.2:85169269-85169288 | MS.gene05549:intron | 45.0% |
| AAATGTTAACCGGTGGCTCC+GGG | + | chr6.2:85168191-85168210 | MS.gene05549:intron | 50.0% | |
| AGTTTCCTTAACCAGTGCCC+GGG | + | chr6.2:85168319-85168338 | MS.gene05549:intron | 50.0% | |
| CCAAGGAAACCGTTCCCAAA+TGG | + | chr6.2:85170890-85170909 | MS.gene05549:CDS | 50.0% | |
| CCATTTGGGAACGGTTTCCT+TGG | - | chr6.2:85170893-85170912 | None:intergenic | 50.0% | |
| CCGTTCCCAAATGGATGGAA+AGG | + | chr6.2:85170899-85170918 | MS.gene05549:CDS | 50.0% | |
| GAAATGTTAACCGGTGGCTC+CGG | + | chr6.2:85168190-85168209 | MS.gene05549:intron | 50.0% | |
| GGAAACCGTTCCCAAATGGA+TGG | + | chr6.2:85170894-85170913 | MS.gene05549:CDS | 50.0% | |
| GTCTCTTAACCCACTTGCGT+TGG | + | chr6.2:85168422-85168441 | MS.gene05549:intron | 50.0% | |
| GTGTGGAAATTCAGGCATGG+AGG | + | chr6.2:85167062-85167081 | MS.gene05549:CDS | 50.0% | |
| ! | GTACGGCAAGACACCTGTTT+TGG | + | chr6.2:85169072-85169091 | MS.gene05549:CDS | 50.0% |
| ! | GTCTTGTTAACCGGTTTCCC+CGG | - | chr6.2:85168340-85168359 | None:intergenic | 50.0% |
| ! | TCTTGTTAACCGGTTTCCCC+GGG | - | chr6.2:85168339-85168358 | None:intergenic | 50.0% |
| AATGTTAACCGGTGGCTCCG+GGG | + | chr6.2:85168192-85168211 | MS.gene05549:intron | 55.0% | |
| ACCACGTTGCCAACGCAAGT+GGG | - | chr6.2:85168434-85168453 | None:intergenic | 55.0% | |
| ATAGTTGGAGCTGGTCCCTC+AGG | + | chr6.2:85166541-85166560 | MS.gene05549:CDS | 55.0% | |
| CTGCAAAGAGCCTTTGTGCC+AGG | + | chr6.2:85168135-85168154 | MS.gene05549:intron | 55.0% | |
| GCTGCTGCTGCTAATCCTGA+GGG | - | chr6.2:85166559-85166578 | None:intergenic | 55.0% | |
| GGGGTGTGGAAATTCAGGCA+TGG | + | chr6.2:85167059-85167078 | MS.gene05549:CDS | 55.0% | |
| GTTTCCTTAACCAGTGCCCG+GGG | + | chr6.2:85168320-85168339 | MS.gene05549:intron | 55.0% | |
| TACCACGTTGCCAACGCAAG+TGG | - | chr6.2:85168435-85168454 | None:intergenic | 55.0% | |
| TGCTGCTGCTGCTAATCCTG+AGG | - | chr6.2:85166560-85166579 | None:intergenic | 55.0% | |
| ! | GTGGTGGGGTGTGGAAATTC+AGG | + | chr6.2:85167054-85167073 | MS.gene05549:CDS | 55.0% |
| TAACCAGTGCCCGGGGAAAC+CGG | + | chr6.2:85168327-85168346 | MS.gene05549:intron | 60.0% | |
| ! | ACCCACTTGCGTTGGCAACG+TGG | + | chr6.2:85168430-85168449 | MS.gene05549:intron | 60.0% |
| !! | GTTTCCCCGGGCACTGGTTA+AGG | - | chr6.2:85168327-85168346 | None:intergenic | 60.0% |
| ! | TAACCGGTTTCCCCGGGCAC+TGG | - | chr6.2:85168333-85168352 | None:intergenic | 65.0% |
| AACCAGTGCCCCGGAGCCAC+CGG | - | chr6.2:85168203-85168222 | None:intergenic | 70.0% | |
| AACCGGTGGCTCCGGGGCAC+TGG | + | chr6.2:85168198-85168217 | MS.gene05549:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 85166478 | 85171048 | 85166478 | ID=MS.gene05549 |
| chr6.2 | mRNA | 85166478 | 85171048 | 85166478 | ID=MS.gene05549.t1;Parent=MS.gene05549 |
| chr6.2 | exon | 85166478 | 85167140 | 85166478 | ID=MS.gene05549.t1.exon1;Parent=MS.gene05549.t1 |
| chr6.2 | CDS | 85166478 | 85167140 | 85166478 | ID=cds.MS.gene05549.t1;Parent=MS.gene05549.t1 |
| chr6.2 | exon | 85168887 | 85169135 | 85168887 | ID=MS.gene05549.t1.exon2;Parent=MS.gene05549.t1 |
| chr6.2 | CDS | 85168887 | 85169135 | 85168887 | ID=cds.MS.gene05549.t1;Parent=MS.gene05549.t1 |
| chr6.2 | exon | 85170066 | 85170188 | 85170066 | ID=MS.gene05549.t1.exon3;Parent=MS.gene05549.t1 |
| chr6.2 | CDS | 85170066 | 85170188 | 85170066 | ID=cds.MS.gene05549.t1;Parent=MS.gene05549.t1 |
| chr6.2 | exon | 85170857 | 85171048 | 85170857 | ID=MS.gene05549.t1.exon4;Parent=MS.gene05549.t1 |
| chr6.2 | CDS | 85170857 | 85171048 | 85170857 | ID=cds.MS.gene05549.t1;Parent=MS.gene05549.t1 |
| Gene Sequence |
| Protein sequence |
