Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61548.t1 | XP_013457491.1 | 98.7 | 379 | 5 | 0 | 1 | 379 | 74 | 452 | 4.80E-225 | 790 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61548.t1 | Q50228 | 50.3 | 360 | 152 | 6 | 1 | 360 | 69 | 401 | 1.2e-102 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61548.t1 | B7FKV4 | 98.7 | 379 | 5 | 0 | 1 | 379 | 74 | 452 | 3.4e-225 | 790.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene61548 | -0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene061115 | MS.gene61548 | 0.907613 | 4.20E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61548.t1 | MTR_4g095660 | 98.681 | 379 | 5 | 0 | 1 | 379 | 74 | 452 | 0.0 | 774 |
| MS.gene61548.t1 | MTR_4g095660 | 98.681 | 379 | 5 | 0 | 1 | 379 | 74 | 452 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61548.t1 | AT4G37560 | 86.016 | 379 | 53 | 0 | 1 | 379 | 74 | 452 | 0.0 | 689 |
| MS.gene61548.t1 | AT4G37550 | 85.752 | 379 | 54 | 0 | 1 | 379 | 74 | 452 | 0.0 | 687 |
| MS.gene61548.t1 | AT4G37550 | 82.058 | 379 | 48 | 1 | 1 | 379 | 74 | 432 | 0.0 | 648 |
| MS.gene61548.t1 | AT4G37560 | 87.316 | 339 | 43 | 0 | 1 | 339 | 74 | 412 | 0.0 | 628 |
| MS.gene61548.t1 | AT4G37550 | 86.431 | 339 | 46 | 0 | 1 | 339 | 74 | 412 | 0.0 | 623 |
| MS.gene61548.t1 | AT4G37550 | 84.466 | 309 | 48 | 0 | 1 | 309 | 74 | 382 | 0.0 | 556 |
| MS.gene61548.t1 | AT4G37550 | 85.099 | 302 | 45 | 0 | 78 | 379 | 1 | 302 | 0.0 | 540 |
| MS.gene61548.t1 | AT4G37550 | 83.333 | 222 | 37 | 0 | 1 | 222 | 74 | 295 | 3.63e-138 | 396 |
Find 0 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTAAATAATAGTTATG+TGG | - | 32634:38159-38178 | MS.gene61548:CDS | 15.0% |
| !! | ATATTATATATGAGAACAAA+GGG | - | 32634:36521-36540 | MS.gene61548:intron | 15.0% |
| !! | GTATTATTAACATAATTGTA+TGG | + | 32634:37284-37303 | MS.gene61548:intergenic | 15.0% |
| !! | TATATTATATATGAGAACAA+AGG | - | 32634:36520-36539 | MS.gene61548:intron | 15.0% |
| !!! | AAATTAAATTCATTTTCGTA+TGG | + | 32634:37620-37639 | MS.gene61548:intergenic | 15.0% |
| !!! | AAATTAACTACTTTTCATAA+AGG | - | 32634:36468-36487 | MS.gene61548:CDS | 15.0% |
| !!! | AATTAAATTCATTTTCGTAT+GGG | + | 32634:37619-37638 | MS.gene61548:intergenic | 15.0% |
| !!! | ACATAGTTTTATTTTACATT+AGG | + | 32634:38043-38062 | MS.gene61548:intergenic | 15.0% |
| !!! | ATAGTTTTATTTTACATTAG+GGG | + | 32634:38041-38060 | MS.gene61548:intergenic | 15.0% |
| !!! | CATAGTTTTATTTTACATTA+GGG | + | 32634:38042-38061 | MS.gene61548:intergenic | 15.0% |
| !! | AATTCATCTCTATGTAAAAA+AGG | - | 32634:37800-37819 | MS.gene61548:intron | 20.0% |
| !! | AATTGACATATATATTTACC+TGG | + | 32634:38011-38030 | MS.gene61548:intergenic | 20.0% |
| !! | ACAAAATTCTCAATCATATT+AGG | - | 32634:38084-38103 | MS.gene61548:CDS | 20.0% |
| !! | TAAAACTATGTCTAATACAT+TGG | - | 32634:38052-38071 | MS.gene61548:intron | 20.0% |
| !! | TATTAACATAATTGTATGGA+AGG | + | 32634:37280-37299 | MS.gene61548:intergenic | 20.0% |
| !!! | TGAAGTCATTTTGTTTTATT+CGG | + | 32634:37724-37743 | MS.gene61548:intergenic | 20.0% |
| ! | AAACTCTTGTAGATTGAAAA+AGG | - | 32634:36985-37004 | MS.gene61548:CDS | 25.0% |
| ! | CGTTAAAATAGCATTAAATG+TGG | + | 32634:36448-36467 | MS.gene61548:intergenic | 25.0% |
| ! | CTGGTTAATTAAACAAAAAG+TGG | + | 32634:36357-36376 | MS.gene61548:intergenic | 25.0% |
| ! | TAGACCTGAATAATGTTTAA+GGG | + | 32634:37889-37908 | MS.gene61548:intergenic | 25.0% |
| ! | TATAAGCTATGAAGCATATA+CGG | + | 32634:36879-36898 | MS.gene61548:intergenic | 25.0% |
| ! | TATAATTTCACACCTGATTA+TGG | + | 32634:37321-37340 | MS.gene61548:intergenic | 25.0% |
| ! | TTATTCATATTACCTTTCCA+AGG | + | 32634:36810-36829 | MS.gene61548:intergenic | 25.0% |
| !! | AAAAATAACAAAGTACCAGT+TGG | - | 32634:38210-38229 | MS.gene61548:CDS | 25.0% |
| !!! | ACTGGTACTTTGTTATTTTT+AGG | + | 32634:38210-38229 | MS.gene61548:intergenic | 25.0% |
| !!! | ACTTATGTGATCATTTTTGT+TGG | - | 32634:36599-36618 | MS.gene61548:intron | 25.0% |
| !!! | TGAAAAAGGTACTGATAAAT+GGG | - | 32634:36999-37018 | MS.gene61548:CDS | 25.0% |
| !!! | TTGAAAAAGGTACTGATAAA+TGG | - | 32634:36998-37017 | MS.gene61548:CDS | 25.0% |
| AATAGAAATGAGTGGTTTCT+TGG | - | 32634:37203-37222 | MS.gene61548:CDS | 30.0% | |
| ATAACACATCCTGGTATAAT+AGG | - | 32634:36643-36662 | MS.gene61548:intron | 30.0% | |
| ATAAGAATTGTGGACAATGA+TGG | - | 32634:36120-36139 | MS.gene61548:CDS | 30.0% | |
| ATCAGGTGTGAAATTATAAG+AGG | - | 32634:37323-37342 | MS.gene61548:CDS | 30.0% | |
| ATTGACTACATATCCAAGTT+TGG | - | 32634:37533-37552 | MS.gene61548:intron | 30.0% | |
| CAAGTATGTTACATCACAAA+AGG | - | 32634:37825-37844 | MS.gene61548:intron | 30.0% | |
| CTACAAGAGTTTCAAGAAAA+GGG | + | 32634:36977-36996 | MS.gene61548:intergenic | 30.0% | |
| CTATCCCTTAAACATTATTC+AGG | - | 32634:37882-37901 | MS.gene61548:intron | 30.0% | |
| GATTATGGCACAATAAAAGA+GGG | + | 32634:37306-37325 | MS.gene61548:intergenic | 30.0% | |
| GTAGACCTGAATAATGTTTA+AGG | + | 32634:37890-37909 | MS.gene61548:intergenic | 30.0% | |
| TCACATTGCTAATGTCAAAA+CGG | + | 32634:36851-36870 | MS.gene61548:intergenic | 30.0% | |
| TCATTGTCCACAATTCTTAT+TGG | + | 32634:36120-36139 | MS.gene61548:intergenic | 30.0% | |
| TCTACAAGAGTTTCAAGAAA+AGG | + | 32634:36978-36997 | MS.gene61548:intergenic | 30.0% | |
| TCTAGTTACGTAGATATTTG+TGG | - | 32634:37685-37704 | MS.gene61548:CDS | 30.0% | |
| TGATTATGGCACAATAAAAG+AGG | + | 32634:37307-37326 | MS.gene61548:intergenic | 30.0% | |
| TTAACAAGCCAACAAAACAA+TGG | + | 32634:36920-36939 | MS.gene61548:intergenic | 30.0% | |
| ! | TCTTTTATTGTGCCATAATC+AGG | - | 32634:37306-37325 | MS.gene61548:CDS | 30.0% |
| ! | TTGTTGCTTAAATTTCAGAC+TGG | + | 32634:36376-36395 | MS.gene61548:intergenic | 30.0% |
| !! | AAATATTGGGTTGACATGAA+GGG | + | 32634:37387-37406 | MS.gene61548:intergenic | 30.0% |
| !! | TACATAGACCATTGTTTTGT+TGG | - | 32634:36909-36928 | MS.gene61548:CDS | 30.0% |
| !! | TGTGATCATTTTTGTTGGAT+AGG | - | 32634:36604-36623 | MS.gene61548:intron | 30.0% |
| AAAAAGTTGTCTCCTTGGAA+AGG | - | 32634:36795-36814 | MS.gene61548:intron | 35.0% | |
| AAAGCTATCTGGTACTTTGA+AGG | - | 32634:36285-36304 | MS.gene61548:intron | 35.0% | |
| AAGCTATCTGGTACTTTGAA+GGG | - | 32634:36286-36305 | MS.gene61548:intron | 35.0% | |
| ACAGAAAAAAGTTGTCTCCT+TGG | - | 32634:36790-36809 | MS.gene61548:intron | 35.0% | |
| ACATTTGACAGAGAAAATGG+AGG | - | 32634:36228-36247 | MS.gene61548:intron | 35.0% | |
| AGGTGTGAAATTATAAGAGG+AGG | - | 32634:37326-37345 | MS.gene61548:CDS | 35.0% | |
| ATAAATGGGAGAAGATTGCA+AGG | - | 32634:37013-37032 | MS.gene61548:CDS | 35.0% | |
| ATGTTTAGGAGTTCCATTGA+TGG | + | 32634:36676-36695 | MS.gene61548:intergenic | 35.0% | |
| CAATGGAACTCCTAAACATA+TGG | - | 32634:36677-36696 | MS.gene61548:intron | 35.0% | |
| CCTAAACATATGGAACGAAA+GGG | - | 32634:36687-36706 | MS.gene61548:intron | 35.0% | |
| GAAAGAGATGTTGCAGAAAA+TGG | - | 32634:36709-36728 | MS.gene61548:intron | 35.0% | |
| GACATAAAGAATCTAAGCAG+AGG | - | 32634:37081-37100 | MS.gene61548:intron | 35.0% | |
| GCAACATTTGACAGAGAAAA+TGG | - | 32634:36225-36244 | MS.gene61548:intron | 35.0% | |
| GCAGTTGAAATATGCAACTT+GGG | - | 32634:36171-36190 | MS.gene61548:CDS | 35.0% | |
| GTCTTCAAATGCACTTATGA+TGG | - | 32634:38258-38277 | MS.gene61548:CDS | 35.0% | |
| TAAATGGGAGAAGATTGCAA+GGG | - | 32634:37014-37033 | MS.gene61548:CDS | 35.0% | |
| TAAGTGCATTTGAAGACATC+TGG | + | 32634:38255-38274 | MS.gene61548:intergenic | 35.0% | |
| TCCTAAACATATGGAACGAA+AGG | - | 32634:36686-36705 | MS.gene61548:intron | 35.0% | |
| TGCAGTTGAAATATGCAACT+TGG | - | 32634:36170-36189 | MS.gene61548:CDS | 35.0% | |
| TTAGCTCCTTCTACAAAAAC+AGG | + | 32634:37123-37142 | MS.gene61548:intergenic | 35.0% | |
| ! | AGACATCTGGTTTCTTTACA+AGG | + | 32634:38242-38261 | MS.gene61548:intergenic | 35.0% |
| ! | ATTTTTGTTGGATAGGAGTG+AGG | - | 32634:36611-36630 | MS.gene61548:intron | 35.0% |
| ! | GTCAACCCAATATTTGAGAT+AGG | - | 32634:37392-37411 | MS.gene61548:CDS | 35.0% |
| !! | AAAGAGTACCTTACACCAAT+GGG | - | 32634:37353-37372 | MS.gene61548:CDS | 35.0% |
| !! | AAAGTACCAGATAGCTTTTG+TGG | + | 32634:36283-36302 | MS.gene61548:intergenic | 35.0% |
| !! | AATATTGGGTTGACATGAAG+GGG | + | 32634:37386-37405 | MS.gene61548:intergenic | 35.0% |
| !! | CAAATATTGGGTTGACATGA+AGG | + | 32634:37388-37407 | MS.gene61548:intergenic | 35.0% |
| !! | TTCTTTTGAGTAGCCAAACT+TGG | + | 32634:37549-37568 | MS.gene61548:intergenic | 35.0% |
| !!! | AGGAGACAACTTTTTTCTGT+TGG | + | 32634:36790-36809 | MS.gene61548:intergenic | 35.0% |
| !!! | GCACTGAGATTTTTTGTGAT+GGG | + | 32634:38291-38310 | MS.gene61548:intergenic | 35.0% |
| !!! | TACCTTCCTGTTTTTGTAGA+AGG | - | 32634:37114-37133 | MS.gene61548:intron | 35.0% |
| AATAGGAACTGCACCATCAA+TGG | - | 32634:36660-36679 | MS.gene61548:intron | 40.0% | |
| ACAATACCGGGAAGAGAAAA+TGG | - | 32634:37048-37067 | MS.gene61548:CDS | 40.0% | |
| ACCTGGTCAAATATAGCTGT+TGG | + | 32634:37994-38013 | MS.gene61548:intergenic | 40.0% | |
| AGGGACAACAAGATAGTAGA+AGG | + | 32634:37912-37931 | MS.gene61548:intergenic | 40.0% | |
| ATACCAGGATGTGTTATACC+TGG | + | 32634:36640-36659 | MS.gene61548:intergenic | 40.0% | |
| CAATGTTGCACAAGCATTAG+GGG | + | 32634:37965-37984 | MS.gene61548:intergenic | 40.0% | |
| CAATTCTTATTGGCCCACTA+AGG | + | 32634:36110-36129 | MS.gene61548:intergenic | 40.0% | |
| CCAATGTTGCACAAGCATTA+GGG | + | 32634:37966-37985 | MS.gene61548:intergenic | 40.0% | |
| CCAGATATTCTTCCTTCACA+GGG | + | 32634:37931-37950 | MS.gene61548:intergenic | 40.0% | |
| CCCTTTCGTTCCATATGTTT+AGG | + | 32634:36690-36709 | MS.gene61548:intergenic | 40.0% | |
| CCTGGTCAAATATAGCTGTT+GGG | + | 32634:37993-38012 | MS.gene61548:intergenic | 40.0% | |
| CTCCTTCTACAAAAACAGGA+AGG | + | 32634:37119-37138 | MS.gene61548:intergenic | 40.0% | |
| CTTATGCCACAAAAGCTATC+TGG | - | 32634:36274-36293 | MS.gene61548:intron | 40.0% | |
| GAATCTAAGCAGAGGTTCAA+AGG | - | 32634:37089-37108 | MS.gene61548:intron | 40.0% | |
| GCATTAGTGTGGATGAAAGT+GGG | - | 32634:37456-37475 | MS.gene61548:intron | 40.0% | |
| GGTGTATTAGTCCTTTAACC+TGG | + | 32634:36336-36355 | MS.gene61548:intergenic | 40.0% | |
| GTCAAATATAGCTGTTGGGA+TGG | + | 32634:37989-38008 | MS.gene61548:intergenic | 40.0% | |
| GTTTGGCTACTCAAAAGAAC+AGG | - | 32634:37550-37569 | MS.gene61548:intron | 40.0% | |
| TCAGAGTGGTTAGTGTTTGA+GGG | - | 32634:37434-37453 | MS.gene61548:intron | 40.0% | |
| TCCAGATATTCTTCCTTCAC+AGG | + | 32634:37932-37951 | MS.gene61548:intergenic | 40.0% | |
| TCTGAGAATCTTGGTTCAAC+GGG | + | 32634:37419-37438 | MS.gene61548:intergenic | 40.0% | |
| TGGGCAAAAACATGTATGCT+TGG | + | 32634:37600-37619 | MS.gene61548:intergenic | 40.0% | |
| TGTATGCAACACTTGCATCT+AGG | + | 32634:37493-37512 | MS.gene61548:intergenic | 40.0% | |
| TGTGGTGCAATAGAAATGAG+TGG | - | 32634:37195-37214 | MS.gene61548:CDS | 40.0% | |
| TTCAACTGCAAGCAAATCTC+CGG | + | 32634:36160-36179 | MS.gene61548:intergenic | 40.0% | |
| TTGAACCAAGATTCTCAGAG+TGG | - | 32634:37420-37439 | MS.gene61548:intron | 40.0% | |
| TTTCCAGGTATAACACATCC+TGG | - | 32634:36634-36653 | MS.gene61548:intron | 40.0% | |
| TTTGACAGAGAAAATGGAGG+TGG | - | 32634:36231-36250 | MS.gene61548:intron | 40.0% | |
| ! | ACTAACCACTCTGAGAATCT+TGG | + | 32634:37428-37447 | MS.gene61548:intergenic | 40.0% |
| ! | ATCTGGTTTCTTTACAAGGC+GGG | + | 32634:38238-38257 | MS.gene61548:intergenic | 40.0% |
| ! | CAGATAGCTTTTGTGGCATA+AGG | + | 32634:36276-36295 | MS.gene61548:intergenic | 40.0% |
| ! | CATCTGGTTTCTTTACAAGG+CGG | + | 32634:38239-38258 | MS.gene61548:intergenic | 40.0% |
| ! | CTCTGAGAATCTTGGTTCAA+CGG | + | 32634:37420-37439 | MS.gene61548:intergenic | 40.0% |
| ! | TAGTGGGCCAATAAGAATTG+TGG | - | 32634:36110-36129 | MS.gene61548:CDS | 40.0% |
| ! | TCTGTTGGTAAGTTTGCCAA+GGG | + | 32634:36775-36794 | MS.gene61548:intergenic | 40.0% |
| ! | TTCTGTTGGTAAGTTTGCCA+AGG | + | 32634:36776-36795 | MS.gene61548:intergenic | 40.0% |
| !! | ATGTGGCTTGATGTTTTTGC+AGG | - | 32634:38176-38195 | MS.gene61548:CDS | 40.0% |
| !! | GAAAGAGTACCTTACACCAA+TGG | - | 32634:37352-37371 | MS.gene61548:CDS | 40.0% |
| !!! | GGCACTGAGATTTTTTGTGA+TGG | + | 32634:38292-38311 | MS.gene61548:intergenic | 40.0% |
| ACGGGGCCTATCTCAAATAT+TGG | + | 32634:37401-37420 | MS.gene61548:intergenic | 45.0% | |
| ATACCGGGAAGAGAAAATGG+TGG | - | 32634:37051-37070 | MS.gene61548:CDS | 45.0% | |
| CACCTCAGATACCAGGTTAA+AGG | - | 32634:36322-36341 | MS.gene61548:intron | 45.0% | |
| CCCAACAGCTATATTTGACC+AGG | - | 32634:37990-38009 | MS.gene61548:intron | 45.0% | |
| CCCTAATGCTTGTGCAACAT+TGG | - | 32634:37963-37982 | MS.gene61548:intron | 45.0% | |
| CCCTGTGAAGGAAGAATATC+TGG | - | 32634:37928-37947 | MS.gene61548:intron | 45.0% | |
| CGGGGCCTATCTCAAATATT+GGG | + | 32634:37400-37419 | MS.gene61548:intergenic | 45.0% | |
| CTCAGAGTGGTTAGTGTTTG+AGG | - | 32634:37433-37452 | MS.gene61548:intron | 45.0% | |
| CTGAGAATCTTGGTTCAACG+GGG | + | 32634:37418-37437 | MS.gene61548:intergenic | 45.0% | |
| GAAGCAGCAAGAACAATACC+GGG | - | 32634:37036-37055 | MS.gene61548:CDS | 45.0% | |
| GAAGGAGCTAATCTCAGTAC+AGG | - | 32634:37132-37151 | MS.gene61548:intron | 45.0% | |
| GATGGTGAGGTCTCATTATG+TGG | - | 32634:37177-37196 | MS.gene61548:intron | 45.0% | |
| GCCAATGTTGCACAAGCATT+AGG | + | 32634:37967-37986 | MS.gene61548:intergenic | 45.0% | |
| GCTTATTCACCTCAGATACC+AGG | - | 32634:36315-36334 | MS.gene61548:intron | 45.0% | |
| GGAAGCAGCAAGAACAATAC+CGG | - | 32634:37035-37054 | MS.gene61548:CDS | 45.0% | |
| GGCATTAGTGTGGATGAAAG+TGG | - | 32634:37455-37474 | MS.gene61548:intron | 45.0% | |
| GGTGCAGTTCCTATTATACC+AGG | + | 32634:36655-36674 | MS.gene61548:intergenic | 45.0% | |
| GTCCTTTAACCTGGTATCTG+AGG | + | 32634:36327-36346 | MS.gene61548:intergenic | 45.0% | |
| TACCGGGAAGAGAAAATGGT+GGG | - | 32634:37052-37071 | MS.gene61548:CDS | 45.0% | |
| TCAACTGCAAGCAAATCTCC+GGG | + | 32634:36159-36178 | MS.gene61548:intergenic | 45.0% | |
| TCAGTCTCTCAAACTATGCG+AGG | - | 32634:36735-36754 | MS.gene61548:intron | 45.0% | |
| TTAGTGTGGATGAAAGTGGG+AGG | - | 32634:37459-37478 | MS.gene61548:intron | 45.0% | |
| TTATTGGCCCACTAAGGTGA+TGG | + | 32634:36104-36123 | MS.gene61548:intergenic | 45.0% | |
| ! | CTATCTTGTTGTCCCTGTGA+AGG | - | 32634:37916-37935 | MS.gene61548:intron | 45.0% |
| ! | TCTGGTTTCTTTACAAGGCG+GGG | + | 32634:38237-38256 | MS.gene61548:intergenic | 45.0% |
| ! | TTCCCACCATTTTCTCTTCC+CGG | + | 32634:37057-37076 | MS.gene61548:intergenic | 45.0% |
| !! | AGTGTTTGAGGGCATTAGTG+TGG | - | 32634:37445-37464 | MS.gene61548:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAACTA+TGG | - | 32634:37852-37871 | MS.gene61548:intron | 5.0% |
| AGGTGACATGCACTTCTCAC+AGG | - | 32634:37152-37171 | MS.gene61548:intron | 50.0% | |
| ATGCACTTCTCACAGGGTGA+TGG | - | 32634:37159-37178 | MS.gene61548:intron | 50.0% | |
| GGTGACATGCACTTCTCACA+GGG | - | 32634:37153-37172 | MS.gene61548:intron | 50.0% | |
| TGAAGCCCCATTCATCACCA+GGG | + | 32634:36203-36222 | MS.gene61548:intergenic | 50.0% | |
| TGGATAGGAGTGAGGTTTCC+AGG | - | 32634:36619-36638 | MS.gene61548:intron | 50.0% | |
| ! | GGTTTTGCATAGCAGACCCT+TGG | - | 32634:36756-36775 | MS.gene61548:intron | 50.0% |
| ! | TCCTCTCCCTGGTGATGAAT+GGG | - | 32634:36194-36213 | MS.gene61548:CDS | 50.0% |
| GGGTTGACATGAAGGGGAGT+GGG | + | 32634:37380-37399 | MS.gene61548:intergenic | 55.0% | |
| GGTTGACATGAAGGGGAGTG+GGG | + | 32634:37379-37398 | MS.gene61548:intergenic | 55.0% | |
| GTGAAGCCCCATTCATCACC+AGG | + | 32634:36204-36223 | MS.gene61548:intergenic | 55.0% | |
| TGCAAGCAAATCTCCGGGCT+GGG | + | 32634:36154-36173 | MS.gene61548:intergenic | 55.0% | |
| TTTACAAGGCGGGGTCCAAC+TGG | + | 32634:38228-38247 | MS.gene61548:intergenic | 55.0% | |
| ! | CCTCTCCCTGGTGATGAATG+GGG | - | 32634:36195-36214 | MS.gene61548:CDS | 55.0% |
| ! | CTTCTCACAGGGTGATGGTG+AGG | - | 32634:37164-37183 | MS.gene61548:intron | 55.0% |
| ! | GTCCTCTCCCTGGTGATGAA+TGG | - | 32634:36193-36212 | MS.gene61548:CDS | 55.0% |
| ! | TGGGTTGACATGAAGGGGAG+TGG | + | 32634:37381-37400 | MS.gene61548:intergenic | 55.0% |
| CCCCATTCATCACCAGGGAG+AGG | + | 32634:36198-36217 | MS.gene61548:intergenic | 60.0% | |
| CTGCAAGCAAATCTCCGGGC+TGG | + | 32634:36155-36174 | MS.gene61548:intergenic | 60.0% | |
| GAGTGGGGCCCATTGGTGTA+AGG | + | 32634:37364-37383 | MS.gene61548:intergenic | 60.0% | |
| TGCAACTTGGGTCCTCTCCC+TGG | - | 32634:36183-36202 | MS.gene61548:CDS | 60.0% | |
| GATGGTATCCCAGCCCAGCC+CGG | - | 32634:36138-36157 | MS.gene61548:CDS | 65.0% | |
| TGAAGGGGAGTGGGGCCCAT+TGG | + | 32634:37371-37390 | MS.gene61548:intergenic | 65.0% | |
| ! | AGCAAATCTCCGGGCTGGGC+TGG | + | 32634:36150-36169 | MS.gene61548:intergenic | 65.0% |
| ! | GCAAATCTCCGGGCTGGGCT+GGG | + | 32634:36149-36168 | MS.gene61548:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32634 | gene | 36099 | 38320 | 36099 | ID=MS.gene61548 |
| 32634 | mRNA | 36099 | 38320 | 36099 | ID=MS.gene61548.t1;Parent=MS.gene61548 |
| 32634 | exon | 38083 | 38320 | 38083 | ID=MS.gene61548.t1.exon1;Parent=MS.gene61548.t1 |
| 32634 | CDS | 38083 | 38320 | 38083 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| 32634 | exon | 37603 | 37793 | 37603 | ID=MS.gene61548.t1.exon2;Parent=MS.gene61548.t1 |
| 32634 | CDS | 37603 | 37793 | 37603 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| 32634 | exon | 37187 | 37422 | 37187 | ID=MS.gene61548.t1.exon3;Parent=MS.gene61548.t1 |
| 32634 | CDS | 37187 | 37422 | 37187 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| 32634 | exon | 36848 | 37091 | 36848 | ID=MS.gene61548.t1.exon4;Parent=MS.gene61548.t1 |
| 32634 | CDS | 36848 | 37091 | 36848 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| 32634 | exon | 36408 | 36515 | 36408 | ID=MS.gene61548.t1.exon5;Parent=MS.gene61548.t1 |
| 32634 | CDS | 36408 | 36515 | 36408 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| 32634 | exon | 36099 | 36221 | 36099 | ID=MS.gene61548.t1.exon6;Parent=MS.gene61548.t1 |
| 32634 | CDS | 36099 | 36221 | 36099 | ID=cds.MS.gene61548.t1;Parent=MS.gene61548.t1 |
| Gene Sequence |
| Protein sequence |
