Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61571.t1 | XP_003626693.1 | 84.7 | 334 | 44 | 3 | 1 | 334 | 1 | 327 | 3.80E-133 | 484.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61571.t1 | Q8GXL3 | 64.9 | 188 | 50 | 5 | 136 | 317 | 134 | 311 | 3.2e-56 | 220.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61571.t1 | G7LBJ7 | 84.7 | 334 | 44 | 3 | 1 | 334 | 1 | 327 | 2.7e-133 | 484.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene61571.t1 | TF | SBP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054713 | MS.gene61571 | 0.856237 | 3.69E-62 | -1.69E-46 |
MS.gene058042 | MS.gene61571 | 0.837913 | 3.93E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61571.t1 | MTR_8g005960 | 93.125 | 320 | 11 | 5 | 1 | 318 | 1 | 311 | 0.0 | 577 |
MS.gene61571.t1 | MTR_2g078770 | 67.045 | 88 | 29 | 0 | 181 | 268 | 45 | 132 | 5.50e-36 | 128 |
MS.gene61571.t1 | MTR_8g463140 | 70.000 | 90 | 26 | 1 | 192 | 281 | 63 | 151 | 1.66e-35 | 127 |
MS.gene61571.t1 | MTR_4g088555 | 72.619 | 84 | 22 | 1 | 186 | 268 | 54 | 137 | 3.79e-35 | 125 |
MS.gene61571.t1 | MTR_1g086250 | 48.649 | 148 | 63 | 3 | 121 | 268 | 87 | 221 | 4.27e-35 | 135 |
MS.gene61571.t1 | MTR_2g046550 | 52.419 | 124 | 53 | 2 | 154 | 277 | 104 | 221 | 1.07e-34 | 134 |
MS.gene61571.t1 | MTR_7g444860 | 67.857 | 84 | 27 | 0 | 187 | 270 | 142 | 225 | 1.83e-34 | 128 |
MS.gene61571.t1 | MTR_1g053715 | 50.781 | 128 | 50 | 1 | 155 | 269 | 22 | 149 | 4.24e-34 | 128 |
MS.gene61571.t1 | MTR_3g085180 | 54.472 | 123 | 49 | 2 | 154 | 269 | 118 | 240 | 1.05e-33 | 129 |
MS.gene61571.t1 | MTR_7g092930 | 67.857 | 84 | 27 | 0 | 184 | 267 | 58 | 141 | 1.91e-33 | 126 |
MS.gene61571.t1 | MTR_2g014200 | 67.470 | 83 | 27 | 0 | 186 | 268 | 56 | 138 | 2.93e-33 | 120 |
MS.gene61571.t1 | MTR_7g110320 | 49.624 | 133 | 59 | 2 | 136 | 268 | 95 | 219 | 3.05e-33 | 130 |
MS.gene61571.t1 | MTR_4g109770 | 70.370 | 81 | 24 | 0 | 189 | 269 | 118 | 198 | 3.58e-33 | 128 |
MS.gene61571.t1 | MTR_7g110320 | 49.624 | 133 | 59 | 2 | 136 | 268 | 95 | 219 | 4.08e-33 | 130 |
MS.gene61571.t1 | MTR_2g461920 | 72.368 | 76 | 21 | 0 | 194 | 269 | 171 | 246 | 4.23e-33 | 129 |
MS.gene61571.t1 | MTR_5g046670 | 61.458 | 96 | 33 | 1 | 174 | 269 | 228 | 319 | 6.66e-33 | 127 |
MS.gene61571.t1 | MTR_1g035010 | 55.000 | 120 | 43 | 1 | 150 | 269 | 71 | 179 | 1.02e-32 | 129 |
MS.gene61571.t1 | MTR_8g096780 | 55.752 | 113 | 46 | 1 | 157 | 269 | 66 | 174 | 1.04e-31 | 122 |
MS.gene61571.t1 | MTR_3g099080 | 68.421 | 76 | 24 | 0 | 194 | 269 | 98 | 173 | 3.84e-30 | 118 |
MS.gene61571.t1 | MTR_7g028740 | 62.651 | 83 | 31 | 0 | 189 | 271 | 72 | 154 | 1.07e-29 | 117 |
MS.gene61571.t1 | MTR_8g080690 | 64.103 | 78 | 28 | 0 | 192 | 269 | 149 | 226 | 2.25e-28 | 113 |
MS.gene61571.t1 | MTR_8g080670 | 50.442 | 113 | 51 | 2 | 154 | 266 | 127 | 234 | 1.27e-27 | 112 |
MS.gene61571.t1 | MTR_8g080680 | 36.150 | 213 | 104 | 6 | 76 | 267 | 4 | 205 | 1.62e-25 | 105 |
MS.gene61571.t1 | MTR_2g020620 | 59.375 | 64 | 26 | 0 | 204 | 267 | 100 | 163 | 4.95e-19 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61571.t1 | AT1G02065 | 44.611 | 334 | 147 | 9 | 1 | 318 | 1 | 312 | 2.55e-80 | 248 |
MS.gene61571.t1 | AT1G02065 | 43.600 | 250 | 117 | 5 | 1 | 241 | 1 | 235 | 7.11e-59 | 190 |
MS.gene61571.t1 | AT1G69170 | 53.543 | 127 | 52 | 3 | 141 | 267 | 78 | 197 | 1.92e-34 | 130 |
MS.gene61571.t1 | AT1G20980 | 57.627 | 118 | 49 | 1 | 154 | 271 | 81 | 197 | 4.00e-34 | 133 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 4.37e-34 | 128 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 134 | 269 | 105 | 251 | 7.57e-34 | 129 |
MS.gene61571.t1 | AT2G47070 | 73.333 | 75 | 20 | 0 | 194 | 268 | 106 | 180 | 2.91e-33 | 130 |
MS.gene61571.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 190 | 269 | 110 | 189 | 3.29e-33 | 130 |
MS.gene61571.t1 | AT3G60030 | 54.545 | 121 | 44 | 3 | 153 | 273 | 96 | 205 | 3.64e-33 | 130 |
MS.gene61571.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 190 | 269 | 110 | 189 | 3.89e-33 | 130 |
MS.gene61571.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 190 | 269 | 110 | 189 | 5.14e-33 | 130 |
MS.gene61571.t1 | AT2G33810 | 67.073 | 82 | 27 | 0 | 187 | 268 | 47 | 128 | 6.10e-33 | 119 |
MS.gene61571.t1 | AT5G43270 | 53.125 | 128 | 43 | 3 | 154 | 267 | 118 | 242 | 1.31e-32 | 125 |
MS.gene61571.t1 | AT5G43270 | 53.125 | 128 | 43 | 3 | 154 | 267 | 118 | 242 | 1.31e-32 | 125 |
MS.gene61571.t1 | AT5G43270 | 53.125 | 128 | 43 | 3 | 154 | 267 | 118 | 242 | 1.31e-32 | 125 |
MS.gene61571.t1 | AT1G53160 | 60.606 | 99 | 35 | 2 | 179 | 273 | 35 | 133 | 2.48e-32 | 119 |
MS.gene61571.t1 | AT1G53160 | 62.766 | 94 | 31 | 2 | 184 | 273 | 40 | 133 | 4.48e-32 | 118 |
MS.gene61571.t1 | AT1G53160 | 62.766 | 94 | 31 | 2 | 184 | 273 | 40 | 133 | 4.48e-32 | 118 |
MS.gene61571.t1 | AT3G57920 | 56.140 | 114 | 44 | 2 | 156 | 269 | 27 | 134 | 7.82e-32 | 122 |
MS.gene61571.t1 | AT1G27360 | 50.781 | 128 | 53 | 2 | 152 | 269 | 123 | 250 | 3.67e-31 | 121 |
MS.gene61571.t1 | AT1G27360 | 50.781 | 128 | 53 | 2 | 152 | 269 | 123 | 250 | 3.67e-31 | 121 |
MS.gene61571.t1 | AT1G27360 | 50.781 | 128 | 53 | 2 | 152 | 269 | 123 | 250 | 3.67e-31 | 121 |
MS.gene61571.t1 | AT1G27360 | 50.781 | 128 | 53 | 2 | 152 | 269 | 123 | 250 | 3.67e-31 | 121 |
MS.gene61571.t1 | AT5G50670 | 60.714 | 84 | 33 | 0 | 186 | 269 | 93 | 176 | 5.59e-30 | 117 |
MS.gene61571.t1 | AT5G50670 | 60.714 | 84 | 33 | 0 | 186 | 269 | 93 | 176 | 5.59e-30 | 117 |
MS.gene61571.t1 | AT5G50570 | 60.714 | 84 | 33 | 0 | 186 | 269 | 93 | 176 | 5.59e-30 | 117 |
MS.gene61571.t1 | AT5G50570 | 60.714 | 84 | 33 | 0 | 186 | 269 | 93 | 176 | 5.59e-30 | 117 |
MS.gene61571.t1 | AT2G42200 | 66.667 | 78 | 26 | 0 | 192 | 269 | 72 | 149 | 1.15e-29 | 117 |
MS.gene61571.t1 | AT3G15270 | 62.667 | 75 | 28 | 0 | 194 | 268 | 63 | 137 | 6.98e-29 | 110 |
MS.gene61571.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 173 | 267 | 117 | 211 | 2.56e-22 | 98.2 |
MS.gene61571.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 173 | 267 | 117 | 211 | 2.73e-22 | 98.2 |
MS.gene61571.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 173 | 267 | 117 | 211 | 3.16e-22 | 98.2 |
MS.gene61571.t1 | AT2G47070 | 72.549 | 51 | 14 | 0 | 218 | 268 | 1 | 51 | 9.15e-19 | 87.8 |
Find 134 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGAATATCTTGAGTATT+TGG | 0.246735 | 8.2:-83868400 | None:intergenic |
CTGTTAACATCCTCGGATTT+TGG | 0.256271 | 8.2:-83867290 | None:intergenic |
CTTGAAGTTGTTGAAGGGCT+TGG | 0.266098 | 8.2:-83868740 | None:intergenic |
GGAGTTGTTGTCTTCATTTC+CGG | 0.269715 | 8.2:-83866922 | None:intergenic |
CTCTCCCTTGACCCTCTTCC+TGG | 0.270502 | 8.2:+83867230 | MS.gene61571:CDS |
CTTCTATCTGAGTTTGATAA+TGG | 0.278524 | 8.2:+83868316 | MS.gene61571:CDS |
GCTGGGCCTGTGGGCTAAAC+TGG | 0.287964 | 8.2:-83867106 | None:intergenic |
ATCACAACCTGCTGCATTGC+TGG | 0.295297 | 8.2:-83867583 | None:intergenic |
TCTAGAGCCCACGAAGTCTA+TGG | 0.307240 | 8.2:-83867315 | None:intergenic |
CCGGTAAGCATGATGTTTGT+TGG | 0.322804 | 8.2:-83866903 | None:intergenic |
GCAGCCACCGTCGTTGCAGC+TGG | 0.327647 | 8.2:+83867542 | MS.gene61571:CDS |
TTGAAGTTGTTGAAGGGCTT+GGG | 0.330690 | 8.2:-83868739 | None:intergenic |
CCAACAAACATCATGCTTAC+CGG | 0.358315 | 8.2:+83866903 | MS.gene61571:CDS |
GGCTAAACTGGTTGTGGTGG+TGG | 0.358538 | 8.2:-83867094 | None:intergenic |
TGTGAATATCTTGAGTATTT+GGG | 0.361532 | 8.2:-83868399 | None:intergenic |
TTGTTGAAGGGCTTGGGCTT+TGG | 0.370317 | 8.2:-83868733 | None:intergenic |
GAAGGATCCCCGCCGGAGTC+TGG | 0.371062 | 8.2:+83868644 | MS.gene61571:intron |
TCGGTCTAGACCACCTGAAC+CGG | 0.380874 | 8.2:+83867406 | MS.gene61571:CDS |
GGAGGTTGTGGTTGAGGTGG+AGG | 0.381025 | 8.2:-83867200 | None:intergenic |
GAACCTGTCGAACCCGGTTC+AGG | 0.386586 | 8.2:-83867419 | None:intergenic |
ATGGAAGGAGGTTGTGGTTG+AGG | 0.388721 | 8.2:-83867206 | None:intergenic |
TTATCCGACAACTACCTTAA+CGG | 0.399307 | 8.2:+83867011 | MS.gene61571:CDS |
AATTTGACGGTGGGCTTGAT+CGG | 0.400326 | 8.2:-83866961 | None:intergenic |
TTCAAACTCGCCTCGATGTC+AGG | 0.404228 | 8.2:+83867442 | MS.gene61571:CDS |
CGGTAAGCATGATGTTTGTT+GGG | 0.413507 | 8.2:-83866902 | None:intergenic |
TACCTTAACGGACCTGGTGC+TGG | 0.415148 | 8.2:+83867023 | MS.gene61571:CDS |
TGCAACGACGGTGGCTGCCT+TGG | 0.421484 | 8.2:-83867537 | None:intergenic |
TAAACTGGTTGTGGTGGTGG+TGG | 0.427802 | 8.2:-83867091 | None:intergenic |
CGAAGAAGGACTGATGGATA+TGG | 0.430604 | 8.2:-83867133 | None:intergenic |
GAGAGCATGGAAGGAGGTTG+TGG | 0.432257 | 8.2:-83867212 | None:intergenic |
TCACAAATCTCACAATACTT+TGG | 0.434049 | 8.2:+83868417 | MS.gene61571:CDS |
CAAAATCCGAGGATGTTAAC+AGG | 0.446882 | 8.2:+83867291 | MS.gene61571:CDS |
ACTGATGGATATGGTGCTGC+TGG | 0.447816 | 8.2:-83867124 | None:intergenic |
TTCGACCCACGGGCTTTCCA+TGG | 0.449008 | 8.2:+83867152 | MS.gene61571:CDS |
ATTGAGCTTGAAGTTGTTGA+AGG | 0.454327 | 8.2:-83868746 | None:intergenic |
GACAGTGGCGGTTTCTCCAC+CGG | 0.454790 | 8.2:+83868688 | MS.gene61571:CDS |
TATGGTGCTGCTGGGCCTGT+GGG | 0.461581 | 8.2:-83867115 | None:intergenic |
GTCCAGCACCAGGTCCGTTA+AGG | 0.461905 | 8.2:-83867025 | None:intergenic |
CTTGACCCTCTTCCTGGTCA+TGG | 0.462725 | 8.2:+83867236 | MS.gene61571:CDS |
GAGACATGTTGGACTATGAA+TGG | 0.466941 | 8.2:+83866874 | None:intergenic |
ATATGGTGCTGCTGGGCCTG+TGG | 0.478517 | 8.2:-83867116 | None:intergenic |
CATGGACATGGACATGGCCC+TGG | 0.481738 | 8.2:+83867254 | MS.gene61571:CDS |
TTTGGTACGAGGAGGAATCC+AGG | 0.482460 | 8.2:-83867272 | None:intergenic |
GACTTCGTGGGCTCTAGACT+TGG | 0.484947 | 8.2:+83867320 | MS.gene61571:CDS |
CCACCTGAACCGGGTTCGAC+AGG | 0.485330 | 8.2:+83867416 | MS.gene61571:CDS |
ATCGGAGGCTGCTGCTGCGG+CGG | 0.485623 | 8.2:-83866943 | None:intergenic |
TTGCAATGCTGATCTATCTC+AGG | 0.487614 | 8.2:+83867472 | MS.gene61571:CDS |
AGACATGTTGGACTATGAAT+GGG | 0.488109 | 8.2:+83866875 | None:intergenic |
TATCAAACTCAGATAGAAGA+TGG | 0.491198 | 8.2:-83868312 | None:intergenic |
GGTTCTGCCAGCAATGCAGC+AGG | 0.491828 | 8.2:+83867576 | MS.gene61571:CDS |
GGGTCAAGGGAGAGCATGGA+AGG | 0.493307 | 8.2:-83867221 | None:intergenic |
TAGATCAGCATTGCAACCTT+CGG | 0.495851 | 8.2:-83867465 | None:intergenic |
CCTCTTCCTGGTCATGGACA+TGG | 0.496987 | 8.2:+83867242 | MS.gene61571:CDS |
ACCCACGGGCTTTCCATGGT+GGG | 0.498666 | 8.2:+83867156 | MS.gene61571:CDS |
GCGGCTCACGAAGTCGTCTT+CGG | 0.499397 | 8.2:-83867375 | None:intergenic |
ATCAGTCCTTCTTCGACCCA+CGG | 0.500041 | 8.2:+83867141 | MS.gene61571:CDS |
CCTGGTCATGGACATGGACA+TGG | 0.500096 | 8.2:+83867248 | MS.gene61571:CDS |
CACAAACTTTGTGGCGGCGG+TGG | 0.502474 | 8.2:-83867505 | None:intergenic |
AAGAGGGTCAAGGGAGAGCA+TGG | 0.508675 | 8.2:-83867225 | None:intergenic |
GAAAGCCCGTGGGTCGAAGA+AGG | 0.515436 | 8.2:-83867147 | None:intergenic |
GAAGGAGGTTGTGGTTGAGG+TGG | 0.517345 | 8.2:-83867203 | None:intergenic |
TCAGTCCTTCTTCGACCCAC+GGG | 0.517839 | 8.2:+83867142 | MS.gene61571:CDS |
GACCCACGGGCTTTCCATGG+TGG | 0.520528 | 8.2:+83867155 | MS.gene61571:CDS |
GTGGTCTAGACCGACGGTAA+AGG | 0.522892 | 8.2:-83867397 | None:intergenic |
ATTGAGTTCCAGACTCCGGC+GGG | 0.525746 | 8.2:-83868652 | None:intergenic |
CCTGTGGGCTAAACTGGTTG+TGG | 0.528281 | 8.2:-83867100 | None:intergenic |
AGTGAAACTCACAAACTTTG+TGG | 0.531020 | 8.2:-83867514 | None:intergenic |
TTTGAAGAACCTGTCGAACC+CGG | 0.531837 | 8.2:-83867425 | None:intergenic |
TCTAGACTTGGACTCAACCT+TGG | 0.532282 | 8.2:+83867332 | MS.gene61571:CDS |
ACGTAGCTGCAGGAAGAGAT+TGG | 0.534462 | 8.2:+83868342 | MS.gene61571:CDS |
TCGATGGTGGGTCCAGCACC+AGG | 0.535316 | 8.2:-83867035 | None:intergenic |
AGGTCCGTTAAGGTAGTTGT+CGG | 0.538800 | 8.2:-83867015 | None:intergenic |
ATCACCACTGTTTATGTCGA+TGG | 0.538976 | 8.2:-83867051 | None:intergenic |
ATCTACATCGTCGGTGACAG+TGG | 0.539420 | 8.2:+83868673 | MS.gene61571:CDS |
GACCTTTGTCGAAAATAATC+CGG | 0.539450 | 8.2:-83868707 | None:intergenic |
TTGATCGGAGGCTGCTGCTG+CGG | 0.542405 | 8.2:-83866946 | None:intergenic |
TAACAGGCCCATAGACTTCG+TGG | 0.543723 | 8.2:+83867307 | MS.gene61571:CDS |
CTAGAGCCCACGAAGTCTAT+GGG | 0.544298 | 8.2:-83867314 | None:intergenic |
GTGGGCTAAACTGGTTGTGG+TGG | 0.546991 | 8.2:-83867097 | None:intergenic |
TATGGGCCTGTTAACATCCT+CGG | 0.547316 | 8.2:-83867297 | None:intergenic |
CCATGTCCATGTCCATGACC+AGG | 0.547483 | 8.2:-83867248 | None:intergenic |
AGTCAACCCAGCTGCAACGA+CGG | 0.547853 | 8.2:-83867549 | None:intergenic |
CAGCCACCGTCGTTGCAGCT+GGG | 0.549496 | 8.2:+83867543 | MS.gene61571:CDS |
CCATGTCCATGACCAGGAAG+AGG | 0.550701 | 8.2:-83867242 | None:intergenic |
ATAATGGAAAACGTAGCTGC+AGG | 0.553645 | 8.2:+83868332 | MS.gene61571:CDS |
CTGATGGATATGGTGCTGCT+GGG | 0.553703 | 8.2:-83867123 | None:intergenic |
TTGAGCTTGAAGTTGTTGAA+GGG | 0.561199 | 8.2:-83868745 | None:intergenic |
ACTCACAAACTTTGTGGCGG+CGG | 0.568304 | 8.2:-83867508 | None:intergenic |
GTGGTCGAAAATTTGACGGT+GGG | 0.570524 | 8.2:-83866970 | None:intergenic |
CGTAGTGGTCGAAAATTTGA+CGG | 0.570580 | 8.2:-83866974 | None:intergenic |
CATGACCAGGAAGAGGGTCA+AGG | 0.572330 | 8.2:-83867235 | None:intergenic |
GACAACTACCTTAACGGACC+TGG | 0.572506 | 8.2:+83867017 | MS.gene61571:CDS |
TCGTGAGCCGCCTTTACCGT+CGG | 0.573246 | 8.2:+83867387 | MS.gene61571:CDS |
GAGGTTGTGGTTGAGGTGGA+GGG | 0.580574 | 8.2:-83867199 | None:intergenic |
ATGACCAGGAAGAGGGTCAA+GGG | 0.581128 | 8.2:-83867234 | None:intergenic |
CCACAACCAGTTTAGCCCAC+AGG | 0.583382 | 8.2:+83867100 | MS.gene61571:CDS |
ACCACTGTTTATGTCGATGG+TGG | 0.584036 | 8.2:-83867048 | None:intergenic |
GTGGGTCGAAGAAGGACTGA+TGG | 0.584810 | 8.2:-83867139 | None:intergenic |
TGGCAGATCATAATCGTCGC+AGG | 0.585265 | 8.2:+83868362 | MS.gene61571:CDS |
CCTGTCGAACCCGGTTCAGG+TGG | 0.588152 | 8.2:-83867416 | None:intergenic |
CGGTCTAGACCACCTGAACC+GGG | 0.589283 | 8.2:+83867407 | MS.gene61571:CDS |
AGAAGTATGTGCGGCCACCA+AGG | 0.589908 | 8.2:-83867349 | None:intergenic |
GACCCACCATGGAAAGCCCG+TGG | 0.597023 | 8.2:-83867158 | None:intergenic |
CCACTGTTTATGTCGATGGT+GGG | 0.597970 | 8.2:-83867047 | None:intergenic |
AGACTTGGACTCAACCTTGG+TGG | 0.599617 | 8.2:+83867335 | MS.gene61571:CDS |
TTGACGGTGGGCTTGATCGG+AGG | 0.603910 | 8.2:-83866958 | None:intergenic |
TTGCAGCTGGGTTGACTCAG+CGG | 0.610713 | 8.2:+83867555 | MS.gene61571:CDS |
TCAAGGGAGAGCATGGAAGG+AGG | 0.612363 | 8.2:-83867218 | None:intergenic |
TTGGTACGAGGAGGAATCCA+GGG | 0.615728 | 8.2:-83867271 | None:intergenic |
GTCTAGACCGACGGTAAAGG+CGG | 0.615862 | 8.2:-83867394 | None:intergenic |
AGTTTGTGAGTTTCACTCCA+AGG | 0.619014 | 8.2:+83867520 | MS.gene61571:CDS |
TACATCGTCGGTGACAGTGG+CGG | 0.620396 | 8.2:+83868676 | MS.gene61571:CDS |
CATGTCCATGACCAGGAAGA+GGG | 0.620462 | 8.2:-83867241 | None:intergenic |
TCGCCTCGATGTCAGGCCGA+AGG | 0.625281 | 8.2:+83867449 | MS.gene61571:CDS |
AAGCAGTTGATGACCCACCA+TGG | 0.631764 | 8.2:-83867169 | None:intergenic |
TGGAACTCAATCTACATCGT+CGG | 0.632089 | 8.2:+83868664 | MS.gene61571:CDS |
CAACCCAGCTGCAACGACGG+TGG | 0.640932 | 8.2:-83867546 | None:intergenic |
GTTCAGGTGGTCTAGACCGA+CGG | 0.647783 | 8.2:-83867403 | None:intergenic |
AACAGGCCCATAGACTTCGT+GGG | 0.651739 | 8.2:+83867308 | MS.gene61571:CDS |
GCGAACGTAGGTTCACTACC+CGG | 0.653510 | 8.2:-83868780 | None:intergenic |
CAACCTTCGGCCTGACATCG+AGG | 0.657988 | 8.2:-83867452 | None:intergenic |
GATTGAGTTCCAGACTCCGG+CGG | 0.661754 | 8.2:-83868653 | None:intergenic |
GTAGATTGAGTTCCAGACTC+CGG | 0.663753 | 8.2:-83868656 | None:intergenic |
CCTCCTCGTACCAAAATCCG+AGG | 0.665794 | 8.2:+83867280 | MS.gene61571:CDS |
ACCCACCATGGAAAGCCCGT+GGG | 0.668555 | 8.2:-83867157 | None:intergenic |
AGTGGTCGAAAATTTGACGG+TGG | 0.671593 | 8.2:-83866971 | None:intergenic |
ACATAGCTTGAGAAGCGTAG+TGG | 0.674169 | 8.2:-83866989 | None:intergenic |
GACATGTTGGACTATGAATG+GGG | 0.677368 | 8.2:+83866876 | None:intergenic |
GAAACTCACAAACTTTGTGG+CGG | 0.681714 | 8.2:-83867511 | None:intergenic |
CTTTGTCGAAAATAATCCGG+TGG | 0.682961 | 8.2:-83868704 | None:intergenic |
AACGTAGGTTCACTACCCGG+TGG | 0.722698 | 8.2:-83868777 | None:intergenic |
CTTCGGAAGAGAAGTATGTG+CGG | 0.729099 | 8.2:-83867358 | None:intergenic |
CCCACCATCGACATAAACAG+TGG | 0.734841 | 8.2:+83867047 | MS.gene61571:CDS |
TTGAGTTCCAGACTCCGGCG+GGG | 0.764174 | 8.2:-83868651 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAAAATAATAATATAG+TGG | - | chr8.2:83868211-83868230 | None:intergenic | 10.0% |
!! | ATATATATATATATATATGC+AGG | + | chr8.2:83868287-83868306 | MS.gene61571:intron | 10.0% |
!! | CTTAATTTAGTAATAATATA+AGG | - | chr8.2:83868489-83868508 | None:intergenic | 10.0% |
!!! | TAAGTAACTTTATTATTTTT+TGG | - | chr8.2:83868581-83868600 | None:intergenic | 10.0% |
!! | TTAATTAAGAAAATTACTTG+TGG | - | chr8.2:83868452-83868471 | None:intergenic | 15.0% |
!!! | ATAACTTAAGACATATATTT+TGG | - | chr8.2:83868545-83868564 | None:intergenic | 15.0% |
!!! | TTTGTTCTTTTTTATTTTGA+AGG | + | chr8.2:83868626-83868645 | MS.gene61571:intron | 15.0% |
!! | AATACTAACATCTTAATCAA+AGG | - | chr8.2:83867843-83867862 | None:intergenic | 20.0% |
!!! | GATTAAGATGTTAGTATTTT+GGG | + | chr8.2:83867845-83867864 | MS.gene61571:intron | 20.0% |
!!! | TAGTACTCTATATGTTTTAA+GGG | - | chr8.2:83868051-83868070 | None:intergenic | 20.0% |
!!! | TGAGTTAGGTTTTAATTAAA+CGG | + | chr8.2:83867779-83867798 | MS.gene61571:intron | 20.0% |
!!! | TGATTAAGATGTTAGTATTT+TGG | + | chr8.2:83867844-83867863 | MS.gene61571:intron | 20.0% |
!!! | TTTAATTTGCACTTATGTTA+TGG | - | chr8.2:83867726-83867745 | None:intergenic | 20.0% |
! | ACTTATCATAAGCATGATTA+TGG | + | chr8.2:83868596-83868615 | MS.gene61571:intron | 25.0% |
! | CAAATTAACACAAGTTTAGT+AGG | - | chr8.2:83867761-83867780 | None:intergenic | 25.0% |
! | CTACTACATTATCAAGTAAA+AGG | - | chr8.2:83868520-83868539 | None:intergenic | 25.0% |
! | TACATTATCAAGTAAAAGGA+AGG | - | chr8.2:83868516-83868535 | None:intergenic | 25.0% |
! | TGTGAATATCTTGAGTATTT+GGG | - | chr8.2:83868402-83868421 | None:intergenic | 25.0% |
! | TTGTGAATATCTTGAGTATT+TGG | - | chr8.2:83868403-83868422 | None:intergenic | 25.0% |
!! | AACTTGTGTTAATTTGAGTT+AGG | + | chr8.2:83867765-83867784 | MS.gene61571:intron | 25.0% |
!! | GTAGTACTCTATATGTTTTA+AGG | - | chr8.2:83868052-83868071 | None:intergenic | 25.0% |
!! | TCAATGATTGAGTTGTTAAA+GGG | - | chr8.2:83867628-83867647 | None:intergenic | 25.0% |
AAGGTTGGATTCAAAAAAGA+CGG | + | chr8.2:83867948-83867967 | MS.gene61571:intron | 30.0% | |
CTTCTATCTGAGTTTGATAA+TGG | + | chr8.2:83868316-83868335 | MS.gene61571:CDS | 30.0% | |
TATCAAACTCAGATAGAAGA+TGG | - | chr8.2:83868315-83868334 | None:intergenic | 30.0% | |
TCACAAATCTCACAATACTT+TGG | + | chr8.2:83868417-83868436 | MS.gene61571:CDS | 30.0% | |
! | CAATGATTGAGTTGTTAAAG+GGG | - | chr8.2:83867627-83867646 | None:intergenic | 30.0% |
! | CTCAATGATTGAGTTGTTAA+AGG | - | chr8.2:83867629-83867648 | None:intergenic | 30.0% |
!! | AGAGTACTACTTAGTTTGTT+TGG | + | chr8.2:83868062-83868081 | MS.gene61571:intron | 30.0% |
!!! | GGTTTTAAAAACGTGTATGA+GGG | + | chr8.2:83867866-83867885 | MS.gene61571:intron | 30.0% |
AGTGAAACTCACAAACTTTG+TGG | - | chr8.2:83867517-83867536 | None:intergenic | 35.0% | |
ATTGAGCTTGAAGTTGTTGA+AGG | - | chr8.2:83868749-83868768 | None:intergenic | 35.0% | |
GACCTTTGTCGAAAATAATC+CGG | - | chr8.2:83868710-83868729 | None:intergenic | 35.0% | |
TTATCCGACAACTACCTTAA+CGG | + | chr8.2:83867011-83867030 | MS.gene61571:CDS | 35.0% | |
TTGAGCTTGAAGTTGTTGAA+GGG | - | chr8.2:83868748-83868767 | None:intergenic | 35.0% | |
! | ATTTTTGTGCCTCACTTCAA+GGG | + | chr8.2:83867661-83867680 | MS.gene61571:intron | 35.0% |
!! | TATTTTTGTGCCTCACTTCA+AGG | + | chr8.2:83867660-83867679 | MS.gene61571:intron | 35.0% |
!!! | GCTGTGTTGTTTTGTTTGAA+TGG | - | chr8.2:83868147-83868166 | None:intergenic | 35.0% |
!!! | GGGTTTTAAAAACGTGTATG+AGG | + | chr8.2:83867865-83867884 | MS.gene61571:intron | 35.0% |
AAAAGACGGAAATACCCTTG+AGG | + | chr8.2:83867962-83867981 | MS.gene61571:intron | 40.0% | |
AAAGACGGAAATACCCTTGA+GGG | + | chr8.2:83867963-83867982 | MS.gene61571:intron | 40.0% | |
AGTAAGCAAGCACAAAACAG+CGG | + | chr8.2:83867907-83867926 | MS.gene61571:intron | 40.0% | |
AGTTGACCGTACATTACATG+GGG | + | chr8.2:83868004-83868023 | MS.gene61571:intron | 40.0% | |
AGTTTGTGAGTTTCACTCCA+AGG | + | chr8.2:83867520-83867539 | MS.gene61571:CDS | 40.0% | |
ATCACCACTGTTTATGTCGA+TGG | - | chr8.2:83867054-83867073 | None:intergenic | 40.0% | |
CAAAATCCGAGGATGTTAAC+AGG | + | chr8.2:83867291-83867310 | MS.gene61571:CDS | 40.0% | |
CCAACAAACATCATGCTTAC+CGG | + | chr8.2:83866903-83866922 | MS.gene61571:CDS | 40.0% | |
CGGTAAGCATGATGTTTGTT+GGG | - | chr8.2:83866905-83866924 | None:intergenic | 40.0% | |
CGTAGTGGTCGAAAATTTGA+CGG | - | chr8.2:83866977-83866996 | None:intergenic | 40.0% | |
CTTTGTCGAAAATAATCCGG+TGG | - | chr8.2:83868707-83868726 | None:intergenic | 40.0% | |
GAAACTCACAAACTTTGTGG+CGG | - | chr8.2:83867514-83867533 | None:intergenic | 40.0% | |
GAGTTGACCGTACATTACAT+GGG | + | chr8.2:83868003-83868022 | MS.gene61571:intron | 40.0% | |
GGAGTTGTTGTCTTCATTTC+CGG | - | chr8.2:83866925-83866944 | None:intergenic | 40.0% | |
GGATTTCCCCATGTAATGTA+CGG | - | chr8.2:83868013-83868032 | None:intergenic | 40.0% | |
TAGATCAGCATTGCAACCTT+CGG | - | chr8.2:83867468-83867487 | None:intergenic | 40.0% | |
TGGAACTCAATCTACATCGT+CGG | + | chr8.2:83868664-83868683 | MS.gene61571:CDS | 40.0% | |
TTGAAGTTGTTGAAGGGCTT+GGG | - | chr8.2:83868742-83868761 | None:intergenic | 40.0% | |
TTGCAATGCTGATCTATCTC+AGG | + | chr8.2:83867472-83867491 | MS.gene61571:CDS | 40.0% | |
! | AGCTCAATGTTTTTCTCCAC+CGG | + | chr8.2:83868761-83868780 | MS.gene61571:CDS | 40.0% |
! | ATAATGGAAAACGTAGCTGC+AGG | + | chr8.2:83868332-83868351 | MS.gene61571:CDS | 40.0% |
! | CACCGGATTATTTTCGACAA+AGG | + | chr8.2:83868705-83868724 | MS.gene61571:CDS | 40.0% |
! | CTGTTAACATCCTCGGATTT+TGG | - | chr8.2:83867293-83867312 | None:intergenic | 40.0% |
! | TGAGTTGACCGTACATTACA+TGG | + | chr8.2:83868002-83868021 | MS.gene61571:intron | 40.0% |
AAGACGGAAATACCCTTGAG+GGG | + | chr8.2:83867964-83867983 | MS.gene61571:intron | 45.0% | |
AAGCACAAAACAGCGGTGTT+GGG | + | chr8.2:83867914-83867933 | MS.gene61571:intron | 45.0% | |
ACCACTGTTTATGTCGATGG+TGG | - | chr8.2:83867051-83867070 | None:intergenic | 45.0% | |
ACGAAAATGCCCTTGAAGTG+AGG | - | chr8.2:83867673-83867692 | None:intergenic | 45.0% | |
AGGTCCGTTAAGGTAGTTGT+CGG | - | chr8.2:83867018-83867037 | None:intergenic | 45.0% | |
AGTGGTCGAAAATTTGACGG+TGG | - | chr8.2:83866974-83866993 | None:intergenic | 45.0% | |
ATTACATGGGGAAATCCCGA+GGG | + | chr8.2:83868016-83868035 | MS.gene61571:intron | 45.0% | |
ATTGTCAACTCTCCCCTCAA+GGG | - | chr8.2:83867979-83867998 | None:intergenic | 45.0% | |
CCACTGTTTATGTCGATGGT+GGG | - | chr8.2:83867050-83867069 | None:intergenic | 45.0% | |
CCGGTAAGCATGATGTTTGT+TGG | - | chr8.2:83866906-83866925 | None:intergenic | 45.0% | |
CTTGAAGTTGTTGAAGGGCT+TGG | - | chr8.2:83868743-83868762 | None:intergenic | 45.0% | |
GTAGATTGAGTTCCAGACTC+CGG | - | chr8.2:83868659-83868678 | None:intergenic | 45.0% | |
GTGGTCGAAAATTTGACGGT+GGG | - | chr8.2:83866973-83866992 | None:intergenic | 45.0% | |
TATGGGCCTGTTAACATCCT+CGG | - | chr8.2:83867300-83867319 | None:intergenic | 45.0% | |
TCTAGACTTGGACTCAACCT+TGG | + | chr8.2:83867332-83867351 | MS.gene61571:CDS | 45.0% | |
TTAAGGGACACAAATGCCCT+CGG | - | chr8.2:83868035-83868054 | None:intergenic | 45.0% | |
TTTGAAGAACCTGTCGAACC+CGG | - | chr8.2:83867428-83867447 | None:intergenic | 45.0% | |
! | AATTTGACGGTGGGCTTGAT+CGG | - | chr8.2:83866964-83866983 | None:intergenic | 45.0% |
! | ACATAGCTTGAGAAGCGTAG+TGG | - | chr8.2:83866992-83867011 | None:intergenic | 45.0% |
! | CGAAGAAGGACTGATGGATA+TGG | - | chr8.2:83867136-83867155 | None:intergenic | 45.0% |
! | CTTCGGAAGAGAAGTATGTG+CGG | - | chr8.2:83867361-83867380 | None:intergenic | 45.0% |
! | GCTCAATGTTTTTCTCCACC+GGG | + | chr8.2:83868762-83868781 | MS.gene61571:CDS | 45.0% |
!!! | TTATTTTGAAGGATCCCCGC+CGG | + | chr8.2:83868637-83868656 | MS.gene61571:intron | 45.0% |
!! | TTAATTTAGTAATAATATAA+GGG | - | chr8.2:83868488-83868507 | None:intergenic | 5.0% |
!!! | TATTTTTTTTTTTATCAAAA+AGG | + | chr8.2:83867816-83867835 | MS.gene61571:intron | 5.0% |
AACAGGCCCATAGACTTCGT+GGG | + | chr8.2:83867308-83867327 | MS.gene61571:CDS | 50.0% | |
ACGTAGCTGCAGGAAGAGAT+TGG | + | chr8.2:83868342-83868361 | MS.gene61571:CDS | 50.0% | |
ACTCACAAACTTTGTGGCGG+CGG | - | chr8.2:83867511-83867530 | None:intergenic | 50.0% | |
AGACTTGGACTCAACCTTGG+TGG | + | chr8.2:83867335-83867354 | MS.gene61571:CDS | 50.0% | |
ATCACAACCTGCTGCATTGC+TGG | - | chr8.2:83867586-83867605 | None:intergenic | 50.0% | |
ATCAGTCCTTCTTCGACCCA+CGG | + | chr8.2:83867141-83867160 | MS.gene61571:CDS | 50.0% | |
ATCTACATCGTCGGTGACAG+TGG | + | chr8.2:83868673-83868692 | MS.gene61571:CDS | 50.0% | |
ATGACCAGGAAGAGGGTCAA+GGG | - | chr8.2:83867237-83867256 | None:intergenic | 50.0% | |
ATGGAAGGAGGTTGTGGTTG+AGG | - | chr8.2:83867209-83867228 | None:intergenic | 50.0% | |
CAAGCACAAAACAGCGGTGT+TGG | + | chr8.2:83867913-83867932 | MS.gene61571:intron | 50.0% | |
CATGTCCATGACCAGGAAGA+GGG | - | chr8.2:83867244-83867263 | None:intergenic | 50.0% | |
CATTACATGGGGAAATCCCG+AGG | + | chr8.2:83868015-83868034 | MS.gene61571:intron | 50.0% | |
CATTGTCAACTCTCCCCTCA+AGG | - | chr8.2:83867980-83867999 | None:intergenic | 50.0% | |
CCCACCATCGACATAAACAG+TGG | + | chr8.2:83867047-83867066 | MS.gene61571:CDS | 50.0% | |
CTAGAGCCCACGAAGTCTAT+GGG | - | chr8.2:83867317-83867336 | None:intergenic | 50.0% | |
TAACAGGCCCATAGACTTCG+TGG | + | chr8.2:83867307-83867326 | MS.gene61571:CDS | 50.0% | |
TAAGGGACACAAATGCCCTC+GGG | - | chr8.2:83868034-83868053 | None:intergenic | 50.0% | |
TGGCAGATCATAATCGTCGC+AGG | + | chr8.2:83868362-83868381 | MS.gene61571:CDS | 50.0% | |
TTCAAACTCGCCTCGATGTC+AGG | + | chr8.2:83867442-83867461 | MS.gene61571:CDS | 50.0% | |
TTGGTACGAGGAGGAATCCA+GGG | - | chr8.2:83867274-83867293 | None:intergenic | 50.0% | |
TTGTTGAAGGGCTTGGGCTT+TGG | - | chr8.2:83868736-83868755 | None:intergenic | 50.0% | |
TTTGGTACGAGGAGGAATCC+AGG | - | chr8.2:83867275-83867294 | None:intergenic | 50.0% | |
! | AGCACAAAACAGCGGTGTTG+GGG | + | chr8.2:83867915-83867934 | MS.gene61571:intron | 50.0% |
! | GACAACTACCTTAACGGACC+TGG | + | chr8.2:83867017-83867036 | MS.gene61571:CDS | 50.0% |
! | TCTAGAGCCCACGAAGTCTA+TGG | - | chr8.2:83867318-83867337 | None:intergenic | 50.0% |
!! | AAGCAGTTGATGACCCACCA+TGG | - | chr8.2:83867172-83867191 | None:intergenic | 50.0% |
!! | ACTGATGGATATGGTGCTGC+TGG | - | chr8.2:83867127-83867146 | None:intergenic | 50.0% |
!! | CATCCTCGGATTTTGGTACG+AGG | - | chr8.2:83867286-83867305 | None:intergenic | 50.0% |
!! | CTGATGGATATGGTGCTGCT+GGG | - | chr8.2:83867126-83867145 | None:intergenic | 50.0% |
!! | TAAACTGGTTGTGGTGGTGG+TGG | - | chr8.2:83867094-83867113 | None:intergenic | 50.0% |
AAGAGGGTCAAGGGAGAGCA+TGG | - | chr8.2:83867228-83867247 | None:intergenic | 55.0% | |
AGTCAACCCAGCTGCAACGA+CGG | - | chr8.2:83867552-83867571 | None:intergenic | 55.0% | |
ATTGAGTTCCAGACTCCGGC+GGG | - | chr8.2:83868655-83868674 | None:intergenic | 55.0% | |
CATGACCAGGAAGAGGGTCA+AGG | - | chr8.2:83867238-83867257 | None:intergenic | 55.0% | |
CCACAACCAGTTTAGCCCAC+AGG | + | chr8.2:83867100-83867119 | MS.gene61571:CDS | 55.0% | |
CCATGTCCATGACCAGGAAG+AGG | - | chr8.2:83867245-83867264 | None:intergenic | 55.0% | |
CCATGTCCATGTCCATGACC+AGG | - | chr8.2:83867251-83867270 | None:intergenic | 55.0% | |
CCTCCTCGTACCAAAATCCG+AGG | + | chr8.2:83867280-83867299 | MS.gene61571:CDS | 55.0% | |
CCTCTTCCTGGTCATGGACA+TGG | + | chr8.2:83867242-83867261 | MS.gene61571:CDS | 55.0% | |
CCTGGTCATGGACATGGACA+TGG | + | chr8.2:83867248-83867267 | MS.gene61571:CDS | 55.0% | |
CTTGACCCTCTTCCTGGTCA+TGG | + | chr8.2:83867236-83867255 | MS.gene61571:CDS | 55.0% | |
GAAGGAGGTTGTGGTTGAGG+TGG | - | chr8.2:83867206-83867225 | None:intergenic | 55.0% | |
GAGGTTGTGGTTGAGGTGGA+GGG | - | chr8.2:83867202-83867221 | None:intergenic | 55.0% | |
GATTGAGTTCCAGACTCCGG+CGG | - | chr8.2:83868656-83868675 | None:intergenic | 55.0% | |
GGCTAAACTGGTTGTGGTGG+TGG | - | chr8.2:83867097-83867116 | None:intergenic | 55.0% | |
GTCTAGACCGACGGTAAAGG+CGG | - | chr8.2:83867397-83867416 | None:intergenic | 55.0% | |
GTGGGTCGAAGAAGGACTGA+TGG | - | chr8.2:83867142-83867161 | None:intergenic | 55.0% | |
GTGGTCTAGACCGACGGTAA+AGG | - | chr8.2:83867400-83867419 | None:intergenic | 55.0% | |
GTTCAGGTGGTCTAGACCGA+CGG | - | chr8.2:83867406-83867425 | None:intergenic | 55.0% | |
TACATCGTCGGTGACAGTGG+CGG | + | chr8.2:83868676-83868695 | MS.gene61571:CDS | 55.0% | |
TCAGTCCTTCTTCGACCCAC+GGG | + | chr8.2:83867142-83867161 | MS.gene61571:CDS | 55.0% | |
TCGGTCTAGACCACCTGAAC+CGG | + | chr8.2:83867406-83867425 | MS.gene61571:CDS | 55.0% | |
! | AAACAGCGGTGTTGGGGGAT+AGG | + | chr8.2:83867921-83867940 | MS.gene61571:intron | 55.0% |
! | AACAGCGGTGTTGGGGGATA+GGG | + | chr8.2:83867922-83867941 | MS.gene61571:intron | 55.0% |
! | AGAAGTATGTGCGGCCACCA+AGG | - | chr8.2:83867352-83867371 | None:intergenic | 55.0% |
! | CCTGTGGGCTAAACTGGTTG+TGG | - | chr8.2:83867103-83867122 | None:intergenic | 55.0% |
! | GAGAGCATGGAAGGAGGTTG+TGG | - | chr8.2:83867215-83867234 | None:intergenic | 55.0% |
! | GCACAAAACAGCGGTGTTGG+GGG | + | chr8.2:83867916-83867935 | MS.gene61571:intron | 55.0% |
! | GTGGGCTAAACTGGTTGTGG+TGG | - | chr8.2:83867100-83867119 | None:intergenic | 55.0% |
! | TACCTTAACGGACCTGGTGC+TGG | + | chr8.2:83867023-83867042 | MS.gene61571:CDS | 55.0% |
! | TCAAGGGAGAGCATGGAAGG+AGG | - | chr8.2:83867221-83867240 | None:intergenic | 55.0% |
! | TTGCAGCTGGGTTGACTCAG+CGG | + | chr8.2:83867555-83867574 | MS.gene61571:CDS | 55.0% |
!! | CCTCGGATTTTGGTACGAGG+AGG | - | chr8.2:83867283-83867302 | None:intergenic | 55.0% |
!! | GACTTCGTGGGCTCTAGACT+TGG | + | chr8.2:83867320-83867339 | MS.gene61571:CDS | 55.0% |
ACCCACCATGGAAAGCCCGT+GGG | - | chr8.2:83867160-83867179 | None:intergenic | 60.0% | |
ACCCACGGGCTTTCCATGGT+GGG | + | chr8.2:83867156-83867175 | MS.gene61571:CDS | 60.0% | |
CAACCTTCGGCCTGACATCG+AGG | - | chr8.2:83867455-83867474 | None:intergenic | 60.0% | |
CACAAACTTTGTGGCGGCGG+TGG | - | chr8.2:83867508-83867527 | None:intergenic | 60.0% | |
CATGGACATGGACATGGCCC+TGG | + | chr8.2:83867254-83867273 | MS.gene61571:CDS | 60.0% | |
CGGTCTAGACCACCTGAACC+GGG | + | chr8.2:83867407-83867426 | MS.gene61571:CDS | 60.0% | |
CTCTCCCTTGACCCTCTTCC+TGG | + | chr8.2:83867230-83867249 | MS.gene61571:CDS | 60.0% | |
GAAAGCCCGTGGGTCGAAGA+AGG | - | chr8.2:83867150-83867169 | None:intergenic | 60.0% | |
GAACCTGTCGAACCCGGTTC+AGG | - | chr8.2:83867422-83867441 | None:intergenic | 60.0% | |
GACAGTGGCGGTTTCTCCAC+CGG | + | chr8.2:83868688-83868707 | MS.gene61571:CDS | 60.0% | |
GCGGCTCACGAAGTCGTCTT+CGG | - | chr8.2:83867378-83867397 | None:intergenic | 60.0% | |
GGAGGTTGTGGTTGAGGTGG+AGG | - | chr8.2:83867203-83867222 | None:intergenic | 60.0% | |
GGTTCTGCCAGCAATGCAGC+AGG | + | chr8.2:83867576-83867595 | MS.gene61571:CDS | 60.0% | |
GTCCAGCACCAGGTCCGTTA+AGG | - | chr8.2:83867028-83867047 | None:intergenic | 60.0% | |
GTGTTGGGGGATAGGGGAGA+AGG | + | chr8.2:83867929-83867948 | MS.gene61571:intron | 60.0% | |
TCGTGAGCCGCCTTTACCGT+CGG | + | chr8.2:83867387-83867406 | MS.gene61571:CDS | 60.0% | |
TGGGGGATAGGGGAGAAGGT+TGG | + | chr8.2:83867933-83867952 | MS.gene61571:intron | 60.0% | |
TTCGACCCACGGGCTTTCCA+TGG | + | chr8.2:83867152-83867171 | MS.gene61571:CDS | 60.0% | |
TTGAGTTCCAGACTCCGGCG+GGG | - | chr8.2:83868654-83868673 | None:intergenic | 60.0% | |
TTGATCGGAGGCTGCTGCTG+CGG | - | chr8.2:83866949-83866968 | None:intergenic | 60.0% | |
! | ACAGCGGTGTTGGGGGATAG+GGG | + | chr8.2:83867923-83867942 | MS.gene61571:intron | 60.0% |
! | GGGTCAAGGGAGAGCATGGA+AGG | - | chr8.2:83867224-83867243 | None:intergenic | 60.0% |
! | TTGACGGTGGGCTTGATCGG+AGG | - | chr8.2:83866961-83866980 | None:intergenic | 60.0% |
!! | ATATGGTGCTGCTGGGCCTG+TGG | - | chr8.2:83867119-83867138 | None:intergenic | 60.0% |
!! | TATGGTGCTGCTGGGCCTGT+GGG | - | chr8.2:83867118-83867137 | None:intergenic | 60.0% |
CAACCCAGCTGCAACGACGG+TGG | - | chr8.2:83867549-83867568 | None:intergenic | 65.0% | |
CAGCCACCGTCGTTGCAGCT+GGG | + | chr8.2:83867543-83867562 | MS.gene61571:CDS | 65.0% | |
CCACCTGAACCGGGTTCGAC+AGG | + | chr8.2:83867416-83867435 | MS.gene61571:CDS | 65.0% | |
CCTGTCGAACCCGGTTCAGG+TGG | - | chr8.2:83867419-83867438 | None:intergenic | 65.0% | |
GACCCACCATGGAAAGCCCG+TGG | - | chr8.2:83867161-83867180 | None:intergenic | 65.0% | |
GACCCACGGGCTTTCCATGG+TGG | + | chr8.2:83867155-83867174 | MS.gene61571:CDS | 65.0% | |
TCGCCTCGATGTCAGGCCGA+AGG | + | chr8.2:83867449-83867468 | MS.gene61571:CDS | 65.0% | |
TGCAACGACGGTGGCTGCCT+TGG | - | chr8.2:83867540-83867559 | None:intergenic | 65.0% | |
! | GCTGGGCCTGTGGGCTAAAC+TGG | - | chr8.2:83867109-83867128 | None:intergenic | 65.0% |
!! | TCGATGGTGGGTCCAGCACC+AGG | - | chr8.2:83867038-83867057 | None:intergenic | 65.0% |
ATCGGAGGCTGCTGCTGCGG+CGG | - | chr8.2:83866946-83866965 | None:intergenic | 70.0% | |
GAAGGATCCCCGCCGGAGTC+TGG | + | chr8.2:83868644-83868663 | MS.gene61571:intron | 70.0% | |
GCAGCCACCGTCGTTGCAGC+TGG | + | chr8.2:83867542-83867561 | MS.gene61571:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 83866879 | 83868787 | 83866879 | ID=MS.gene61571 |
chr8.2 | mRNA | 83866879 | 83868787 | 83866879 | ID=MS.gene61571.t1;Parent=MS.gene61571 |
chr8.2 | exon | 83866879 | 83867597 | 83866879 | ID=MS.gene61571.t1.exon1;Parent=MS.gene61571.t1 |
chr8.2 | CDS | 83866879 | 83867597 | 83866879 | ID=cds.MS.gene61571.t1;Parent=MS.gene61571.t1 |
chr8.2 | exon | 83868309 | 83868454 | 83868309 | ID=MS.gene61571.t1.exon2;Parent=MS.gene61571.t1 |
chr8.2 | CDS | 83868309 | 83868454 | 83868309 | ID=cds.MS.gene61571.t1;Parent=MS.gene61571.t1 |
chr8.2 | exon | 83868648 | 83868787 | 83868648 | ID=MS.gene61571.t1.exon3;Parent=MS.gene61571.t1 |
chr8.2 | CDS | 83868648 | 83868787 | 83868648 | ID=cds.MS.gene61571.t1;Parent=MS.gene61571.t1 |
Gene Sequence |
Protein sequence |