Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054713.t1 | AES97097.1 | 97.7 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 6.30E-144 | 520 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054713.t1 | G7JZ18 | 97.7 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 4.6e-144 | 520.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051860 | MS.gene054713 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene05288 | MS.gene054713 | 0.817646 | 2.96E-52 | -1.69E-46 |
| MS.gene05289 | MS.gene054713 | 0.805691 | 1.18E-49 | -1.69E-46 |
| MS.gene053184 | MS.gene054713 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene055358 | 0.800773 | 1.23E-48 | -1.69E-46 |
| MS.gene054713 | MS.gene055860 | 0.824152 | 9.42E-54 | -1.69E-46 |
| MS.gene054713 | MS.gene058042 | 0.884885 | 1.31E-71 | -1.69E-46 |
| MS.gene054713 | MS.gene059609 | 0.8049 | 1.73E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene061114 | -0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene061333 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene054713 | MS.gene061334 | 0.818852 | 1.58E-52 | -1.69E-46 |
| MS.gene054713 | MS.gene064798 | 0.86802 | 8.90E-66 | -1.69E-46 |
| MS.gene054713 | MS.gene065054 | 0.882916 | 6.97E-71 | -1.69E-46 |
| MS.gene054713 | MS.gene065988 | 0.888862 | 4.05E-73 | -1.69E-46 |
| MS.gene054713 | MS.gene066092 | 0.881658 | 2.00E-70 | -1.69E-46 |
| MS.gene054713 | MS.gene066094 | 0.870908 | 1.02E-66 | -1.69E-46 |
| MS.gene054713 | MS.gene066098 | 0.874609 | 5.91E-68 | -1.69E-46 |
| MS.gene054713 | MS.gene066206 | 0.814622 | 1.40E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene069088 | 0.887121 | 1.88E-72 | -1.69E-46 |
| MS.gene054713 | MS.gene071062 | 0.801123 | 1.04E-48 | -1.69E-46 |
| MS.gene054713 | MS.gene074393 | -0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene08324 | -0.813907 | 2.02E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene09768 | -0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene22311 | -0.812171 | 4.85E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene23009 | 0.836775 | 7.68E-57 | -1.69E-46 |
| MS.gene054713 | MS.gene23306 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene25913 | -0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene26752 | 0.849394 | 3.33E-60 | -1.69E-46 |
| MS.gene054713 | MS.gene27868 | 0.873834 | 1.08E-67 | -1.69E-46 |
| MS.gene054713 | MS.gene27881 | 0.81281 | 3.52E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene31520 | 0.865576 | 5.34E-65 | -1.69E-46 |
| MS.gene054713 | MS.gene34936 | -0.846038 | 2.79E-59 | -1.69E-46 |
| MS.gene054713 | MS.gene38772 | 0.814552 | 1.45E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene43800 | 0.846041 | 2.79E-59 | -1.69E-46 |
| MS.gene054713 | MS.gene44450 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene44897 | 0.836498 | 9.03E-57 | -1.69E-46 |
| MS.gene054713 | MS.gene45771 | 0.805843 | 1.10E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene46374 | 0.842667 | 2.25E-58 | -1.69E-46 |
| MS.gene054713 | MS.gene47283 | 0.842518 | 2.46E-58 | -1.69E-46 |
| MS.gene054713 | MS.gene47338 | 0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene47339 | 0.806167 | 9.38E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene47340 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene49839 | 0.868839 | 4.85E-66 | -1.69E-46 |
| MS.gene054713 | MS.gene51052 | 0.878333 | 3.06E-69 | -1.69E-46 |
| MS.gene054713 | MS.gene51055 | 0.865561 | 5.40E-65 | -1.69E-46 |
| MS.gene054713 | MS.gene52801 | 0.850718 | 1.42E-60 | -1.69E-46 |
| MS.gene054713 | MS.gene55625 | 0.880266 | 6.32E-70 | -1.69E-46 |
| MS.gene054713 | MS.gene56057 | 0.80489 | 1.74E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene57565 | 0.825183 | 5.39E-54 | -1.69E-46 |
| MS.gene054713 | MS.gene57566 | 0.830078 | 3.60E-55 | -1.69E-46 |
| MS.gene054713 | MS.gene57944 | -0.838064 | 3.59E-57 | -1.69E-46 |
| MS.gene054713 | MS.gene59082 | 0.801617 | 8.28E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene59355 | 0.888675 | 4.79E-73 | -1.69E-46 |
| MS.gene054713 | MS.gene59442 | 0.903959 | 2.02E-79 | -1.69E-46 |
| MS.gene054713 | MS.gene59948 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene60903 | 0.81391 | 2.01E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene61207 | 0.835411 | 1.70E-56 | -1.69E-46 |
| MS.gene054713 | MS.gene61522 | 0.823194 | 1.58E-53 | -1.69E-46 |
| MS.gene054713 | MS.gene61571 | 0.856237 | 3.69E-62 | -1.69E-46 |
| MS.gene054713 | MS.gene62778 | 0.851779 | 7.10E-61 | -1.69E-46 |
| MS.gene054713 | MS.gene62846 | 0.831661 | 1.47E-55 | -1.69E-46 |
| MS.gene054713 | MS.gene64740 | 0.83486 | 2.35E-56 | -1.69E-46 |
| MS.gene054713 | MS.gene66291 | 0.808686 | 2.74E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene66964 | 0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene054713 | MS.gene66969 | 0.846572 | 2.00E-59 | -1.69E-46 |
| MS.gene054713 | MS.gene68036 | 0.907034 | 7.83E-81 | -1.69E-46 |
| MS.gene054713 | MS.gene68582 | 0.894937 | 1.54E-75 | -1.69E-46 |
| MS.gene054713 | MS.gene68923 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene69359 | 0.863386 | 2.58E-64 | -1.69E-46 |
| MS.gene054713 | MS.gene70022 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene70586 | -0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene71203 | 0.866727 | 2.31E-65 | -1.69E-46 |
| MS.gene054713 | MS.gene71889 | 0.8744 | 6.96E-68 | -1.69E-46 |
| MS.gene054713 | MS.gene72110 | 0.885157 | 1.04E-71 | -1.69E-46 |
| MS.gene054713 | MS.gene72203 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene72268 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene73257 | 0.881421 | 2.43E-70 | -1.69E-46 |
| MS.gene054713 | MS.gene74971 | 0.883975 | 2.84E-71 | -1.69E-46 |
| MS.gene054713 | MS.gene76226 | 0.882577 | 9.27E-71 | -1.69E-46 |
| MS.gene054713 | MS.gene76373 | 0.855557 | 5.83E-62 | -1.69E-46 |
| MS.gene054713 | MS.gene77188 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene78247 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene87430 | 0.859411 | 4.21E-63 | -1.69E-46 |
| MS.gene054713 | MS.gene87897 | 0.894165 | 3.19E-75 | -1.69E-46 |
| MS.gene054713 | MS.gene88243 | 0.810276 | 1.25E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene88788 | 0.857964 | 1.14E-62 | -1.69E-46 |
| MS.gene054713 | MS.gene89109 | 0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene054713 | MS.gene90151 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene054713 | MS.gene92590 | 0.881039 | 3.34E-70 | -1.69E-46 |
| MS.gene054713 | MS.gene93888 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene98071 | 0.924513 | 6.37E-90 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054713.t1 | MTR_5g045300 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTTCCTTATTCTTTAA+TGG | 0.128917 | 5.3:-32843871 | MS.gene054713:CDS |
| CTTGAGTGTCATGCTCATTT+TGG | 0.177443 | 5.3:-32844222 | MS.gene054713:CDS |
| GGTTTCTTCAACCTTGTTAT+TGG | 0.181137 | 5.3:-32844087 | MS.gene054713:CDS |
| AGTACCCTCTTTAGTTTATT+GGG | 0.199150 | 5.3:-32844181 | MS.gene054713:CDS |
| TACATTTCCATTAAAGAATA+AGG | 0.220724 | 5.3:+32843864 | None:intergenic |
| AGCTATATCTTGGGTTAGTT+TGG | 0.236897 | 5.3:-32843788 | MS.gene054713:CDS |
| TTCTATGTTTGTGTGGATTA+AGG | 0.264606 | 5.3:-32843761 | MS.gene054713:CDS |
| GAGTACCCTCTTTAGTTTAT+TGG | 0.311311 | 5.3:-32844182 | MS.gene054713:CDS |
| TTTGGAATCTTTGTTGGGAT+TGG | 0.327665 | 5.3:-32844204 | MS.gene054713:CDS |
| GTTTCCCAATACCAATCTAA+TGG | 0.354508 | 5.3:+32844144 | None:intergenic |
| GCAGCCCATTAGATTGGTAT+TGG | 0.375445 | 5.3:-32844149 | MS.gene054713:CDS |
| AAGTAAAGGAGGTTCGTAAA+AGG | 0.385552 | 5.3:+32843939 | None:intergenic |
| ATGTTGGTAAAGCTATATCT+TGG | 0.394828 | 5.3:-32843798 | MS.gene054713:CDS |
| GCTATATCTTGGGTTAGTTT+GGG | 0.395217 | 5.3:-32843787 | MS.gene054713:CDS |
| CAGCCCATTAGATTGGTATT+GGG | 0.406163 | 5.3:-32844148 | MS.gene054713:CDS |
| AATTTGAAGTATAAACTTAG+TGG | 0.421521 | 5.3:+32844249 | None:intergenic |
| TGTAACTAGTTCTTGATCCT+TGG | 0.433441 | 5.3:+32843639 | None:intergenic |
| TAAGATTAAACTCAAAGGGT+TGG | 0.466105 | 5.3:-32844004 | MS.gene054713:CDS |
| TGCTCAATCGTTTAATTGAG+TGG | 0.467954 | 5.3:-32844038 | MS.gene054713:CDS |
| ATCCTTGCTTTCATGAATGA+AGG | 0.475263 | 5.3:-32844330 | MS.gene054713:CDS |
| TTTACGAACCTCCTTTACTT+AGG | 0.475789 | 5.3:-32843936 | MS.gene054713:CDS |
| TTTCCCAATACCAATCTAAT+GGG | 0.484056 | 5.3:+32844145 | None:intergenic |
| ATCGTAAGATTAAACTCAAA+GGG | 0.489443 | 5.3:-32844008 | MS.gene054713:CDS |
| ACTATGTCTTGAGAAGAAAC+TGG | 0.491172 | 5.3:+32843913 | None:intergenic |
| CAACTCGCAGCCCATTAGAT+TGG | 0.497410 | 5.3:-32844155 | MS.gene054713:CDS |
| TGTTGGTAAAGCTATATCTT+GGG | 0.500531 | 5.3:-32843797 | MS.gene054713:CDS |
| CGTCAATGAACAATGGTCAT+GGG | 0.519308 | 5.3:-32844283 | MS.gene054713:CDS |
| TTGTGTGCCTTCTCTTCAAG+TGG | 0.521153 | 5.3:+32843706 | None:intergenic |
| GAAGAAACTGGCCTAAGTAA+AGG | 0.522889 | 5.3:+32843925 | None:intergenic |
| TCGTCAATGAACAATGGTCA+TGG | 0.527571 | 5.3:-32844284 | MS.gene054713:CDS |
| GTACCCTCTTTAGTTTATTG+GGG | 0.529611 | 5.3:-32844180 | MS.gene054713:CDS |
| TTCTCTTCAAGTGGTATCTG+TGG | 0.535124 | 5.3:+32843715 | None:intergenic |
| TGCACCCCAATAAACTAAAG+AGG | 0.538582 | 5.3:+32844176 | None:intergenic |
| CAGATTTACACACATGATGT+TGG | 0.543563 | 5.3:-32843814 | MS.gene054713:CDS |
| GATCGTAAGATTAAACTCAA+AGG | 0.575574 | 5.3:-32844009 | MS.gene054713:CDS |
| ACAGATACCACTTGAAGAGA+AGG | 0.584939 | 5.3:-32843713 | MS.gene054713:CDS |
| TGGGAAGTTCTATGTTTGTG+TGG | 0.587350 | 5.3:-32843768 | MS.gene054713:CDS |
| AGATGACAAGAAAGAGTCCA+AGG | 0.595725 | 5.3:-32843656 | MS.gene054713:CDS |
| GACGAAGCTATTAGAGAGTG+AGG | 0.597104 | 5.3:+32844302 | None:intergenic |
| AGCCTTCATTCATGAAAGCA+AGG | 0.601961 | 5.3:+32844328 | None:intergenic |
| GAAACTGGCCTAAGTAAAGG+AGG | 0.623329 | 5.3:+32843928 | None:intergenic |
| GCACCCCAATAAACTAAAGA+GGG | 0.630654 | 5.3:+32844177 | None:intergenic |
| AAGCAAGGATACATATTGAG+AGG | 0.635812 | 5.3:+32844343 | None:intergenic |
| GTCAATGAACAATGGTCATG+GGG | 0.649937 | 5.3:-32844282 | MS.gene054713:CDS |
| GAAGCTATTAGAGAGTGAGG+AGG | 0.662308 | 5.3:+32844305 | None:intergenic |
| ATAGCTTCGTCAATGAACAA+TGG | 0.663464 | 5.3:-32844290 | MS.gene054713:CDS |
| AATGTAGCAATCCAATAACA+AGG | 0.681282 | 5.3:+32844076 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTATTTCCTTATTCTTTAA+TGG | - | chr5.3:32844134-32844153 | MS.gene054713:CDS | 20.0% |
| !! | TACATTTCCATTAAAGAATA+AGG | + | chr5.3:32844144-32844163 | None:intergenic | 20.0% |
| !!! | AATGTTGAAATTTTGAAAAC+TGG | - | chr5.3:32843897-32843916 | MS.gene054713:CDS | 20.0% |
| !!! | AATTTGAAGTATAAACTTAG+TGG | + | chr5.3:32843759-32843778 | None:intergenic | 20.0% |
| ! | ATCGTAAGATTAAACTCAAA+GGG | - | chr5.3:32843997-32844016 | MS.gene054713:CDS | 25.0% |
| !! | TGAATGAACTTTTCAATATC+AGG | + | chr5.3:32843639-32843658 | None:intergenic | 25.0% |
| !!! | GAAATGTATTGCTTTTAAGT+TGG | - | chr5.3:32844156-32844175 | MS.gene054713:CDS | 25.0% |
| AATGTAGCAATCCAATAACA+AGG | + | chr5.3:32843932-32843951 | None:intergenic | 30.0% | |
| GATCGTAAGATTAAACTCAA+AGG | - | chr5.3:32843996-32844015 | MS.gene054713:CDS | 30.0% | |
| TAAGATTAAACTCAAAGGGT+TGG | - | chr5.3:32844001-32844020 | MS.gene054713:CDS | 30.0% | |
| TTTCCCAATACCAATCTAAT+GGG | + | chr5.3:32843863-32843882 | None:intergenic | 30.0% | |
| ! | AGTACCCTCTTTAGTTTATT+GGG | - | chr5.3:32843824-32843843 | MS.gene054713:CDS | 30.0% |
| ! | ATGTTGGTAAAGCTATATCT+TGG | - | chr5.3:32844207-32844226 | MS.gene054713:CDS | 30.0% |
| ! | CCAACTCTGAATTTTTCTTA+GGG | + | chr5.3:32844037-32844056 | None:intergenic | 30.0% |
| ! | TCCAACTCTGAATTTTTCTT+AGG | + | chr5.3:32844038-32844057 | None:intergenic | 30.0% |
| ! | TGTTGGTAAAGCTATATCTT+GGG | - | chr5.3:32844208-32844227 | MS.gene054713:CDS | 30.0% |
| ! | TTCTATGTTTGTGTGGATTA+AGG | - | chr5.3:32844244-32844263 | MS.gene054713:CDS | 30.0% |
| !!! | CTCATTTTGGAATCTTTGTT+GGG | - | chr5.3:32843796-32843815 | MS.gene054713:CDS | 30.0% |
| !!! | CTTTTAAGTTGGTGTTTTTC+TGG | - | chr5.3:32844167-32844186 | MS.gene054713:CDS | 30.0% |
| AAGCAAGGATACATATTGAG+AGG | + | chr5.3:32843665-32843684 | None:intergenic | 35.0% | |
| AAGTAAAGGAGGTTCGTAAA+AGG | + | chr5.3:32844069-32844088 | None:intergenic | 35.0% | |
| ACTATGTCTTGAGAAGAAAC+TGG | + | chr5.3:32844095-32844114 | None:intergenic | 35.0% | |
| ATAGCTTCGTCAATGAACAA+TGG | - | chr5.3:32843715-32843734 | MS.gene054713:CDS | 35.0% | |
| ATCCTTGCTTTCATGAATGA+AGG | - | chr5.3:32843675-32843694 | MS.gene054713:CDS | 35.0% | |
| CAGATTTACACACATGATGT+TGG | - | chr5.3:32844191-32844210 | MS.gene054713:CDS | 35.0% | |
| CCCTAAGAAAAATTCAGAGT+TGG | - | chr5.3:32844034-32844053 | MS.gene054713:CDS | 35.0% | |
| GTTTCCCAATACCAATCTAA+TGG | + | chr5.3:32843864-32843883 | None:intergenic | 35.0% | |
| TGCTCAATCGTTTAATTGAG+TGG | - | chr5.3:32843967-32843986 | MS.gene054713:CDS | 35.0% | |
| TTTACGAACCTCCTTTACTT+AGG | - | chr5.3:32844069-32844088 | MS.gene054713:CDS | 35.0% | |
| ! | GAGTACCCTCTTTAGTTTAT+TGG | - | chr5.3:32843823-32843842 | MS.gene054713:CDS | 35.0% |
| ! | GGTTTCTTCAACCTTGTTAT+TGG | - | chr5.3:32843918-32843937 | MS.gene054713:CDS | 35.0% |
| ! | GTACCCTCTTTAGTTTATTG+GGG | - | chr5.3:32843825-32843844 | MS.gene054713:CDS | 35.0% |
| ! | TGTAACTAGTTCTTGATCCT+TGG | + | chr5.3:32844369-32844388 | None:intergenic | 35.0% |
| ! | TTTGGAATCTTTGTTGGGAT+TGG | - | chr5.3:32843801-32843820 | MS.gene054713:CDS | 35.0% |
| !! | AGCTATATCTTGGGTTAGTT+TGG | - | chr5.3:32844217-32844236 | MS.gene054713:CDS | 35.0% |
| !! | GCTATATCTTGGGTTAGTTT+GGG | - | chr5.3:32844218-32844237 | MS.gene054713:CDS | 35.0% |
| !!! | GCTCATTTTGGAATCTTTGT+TGG | - | chr5.3:32843795-32843814 | MS.gene054713:CDS | 35.0% |
| ACAGATACCACTTGAAGAGA+AGG | - | chr5.3:32844292-32844311 | MS.gene054713:CDS | 40.0% | |
| AGATGACAAGAAAGAGTCCA+AGG | - | chr5.3:32844349-32844368 | MS.gene054713:CDS | 40.0% | |
| AGCCTTCATTCATGAAAGCA+AGG | + | chr5.3:32843680-32843699 | None:intergenic | 40.0% | |
| CAGCCCATTAGATTGGTATT+GGG | - | chr5.3:32843857-32843876 | MS.gene054713:CDS | 40.0% | |
| CGTCAATGAACAATGGTCAT+GGG | - | chr5.3:32843722-32843741 | MS.gene054713:CDS | 40.0% | |
| GCACCCCAATAAACTAAAGA+GGG | + | chr5.3:32843831-32843850 | None:intergenic | 40.0% | |
| GTCAATGAACAATGGTCATG+GGG | - | chr5.3:32843723-32843742 | MS.gene054713:CDS | 40.0% | |
| TCGTCAATGAACAATGGTCA+TGG | - | chr5.3:32843721-32843740 | MS.gene054713:CDS | 40.0% | |
| TGCACCCCAATAAACTAAAG+AGG | + | chr5.3:32843832-32843851 | None:intergenic | 40.0% | |
| TGGGAAGTTCTATGTTTGTG+TGG | - | chr5.3:32844237-32844256 | MS.gene054713:CDS | 40.0% | |
| TTCTCTTCAAGTGGTATCTG+TGG | + | chr5.3:32844293-32844312 | None:intergenic | 40.0% | |
| ! | CTTGAGTGTCATGCTCATTT+TGG | - | chr5.3:32843783-32843802 | MS.gene054713:CDS | 40.0% |
| ! | GAAGAAACTGGCCTAAGTAA+AGG | + | chr5.3:32844083-32844102 | None:intergenic | 40.0% |
| GAAGCTATTAGAGAGTGAGG+AGG | + | chr5.3:32843703-32843722 | None:intergenic | 45.0% | |
| GACGAAGCTATTAGAGAGTG+AGG | + | chr5.3:32843706-32843725 | None:intergenic | 45.0% | |
| GCAGCCCATTAGATTGGTAT+TGG | - | chr5.3:32843856-32843875 | MS.gene054713:CDS | 45.0% | |
| TTGTGTGCCTTCTCTTCAAG+TGG | + | chr5.3:32844302-32844321 | None:intergenic | 45.0% | |
| ! | GAAACTGGCCTAAGTAAAGG+AGG | + | chr5.3:32844080-32844099 | None:intergenic | 45.0% |
| CAACTCGCAGCCCATTAGAT+TGG | - | chr5.3:32843850-32843869 | MS.gene054713:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 32843621 | 32844406 | 32843621 | ID=MS.gene054713 |
| chr5.3 | mRNA | 32843621 | 32844406 | 32843621 | ID=MS.gene054713.t1;Parent=MS.gene054713 |
| chr5.3 | exon | 32843621 | 32844406 | 32843621 | ID=MS.gene054713.t1.exon1;Parent=MS.gene054713.t1 |
| chr5.3 | CDS | 32843621 | 32844406 | 32843621 | ID=cds.MS.gene054713.t1;Parent=MS.gene054713.t1 |
| Gene Sequence |
| Protein sequence |
