Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61989.t1 | ABD32495.1 | 65.3 | 737 | 43 | 5 | 1 | 732 | 52 | 580 | 1.90E-249 | 872.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61989.t1 | O64787 | 22.3 | 355 | 225 | 10 | 5 | 351 | 7 | 318 | 2.4e-06 | 55.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61989.t1 | G7KLE6 | 65.3 | 737 | 43 | 5 | 1 | 732 | 62 | 590 | 1.4e-249 | 872.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene61989 | 0.81335 | 2.68E-51 | -1.69E-46 |
MS.gene049786 | MS.gene61989 | 0.802076 | 6.66E-49 | -1.69E-46 |
MS.gene055513 | MS.gene61989 | 0.834182 | 3.47E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61989.t1 | MTR_6g013380 | 90.909 | 484 | 34 | 4 | 1 | 479 | 62 | 540 | 0.0 | 896 |
MS.gene61989.t1 | MTR_6g013380 | 90.789 | 152 | 14 | 0 | 581 | 732 | 439 | 590 | 2.23e-91 | 299 |
MS.gene61989.t1 | MTR_6g013240 | 90.909 | 484 | 34 | 4 | 1 | 479 | 67 | 545 | 0.0 | 896 |
MS.gene61989.t1 | MTR_6g013240 | 90.789 | 152 | 14 | 0 | 581 | 732 | 444 | 595 | 2.34e-91 | 299 |
MS.gene61989.t1 | MTR_7g095350 | 62.319 | 483 | 172 | 4 | 1 | 479 | 9 | 485 | 0.0 | 587 |
MS.gene61989.t1 | MTR_7g095350 | 59.091 | 154 | 58 | 2 | 581 | 732 | 385 | 535 | 7.73e-49 | 182 |
MS.gene61989.t1 | MTR_7g095350 | 62.319 | 483 | 172 | 4 | 1 | 479 | 1 | 477 | 0.0 | 587 |
MS.gene61989.t1 | MTR_7g095350 | 59.091 | 154 | 58 | 2 | 581 | 732 | 377 | 527 | 6.56e-49 | 182 |
MS.gene61989.t1 | MTR_3g009910 | 56.461 | 503 | 188 | 8 | 1 | 479 | 3 | 498 | 0.0 | 545 |
MS.gene61989.t1 | MTR_3g009910 | 51.429 | 175 | 61 | 3 | 581 | 732 | 380 | 553 | 4.41e-46 | 174 |
MS.gene61989.t1 | MTR_7g089610 | 58.980 | 490 | 176 | 12 | 1 | 479 | 37 | 512 | 0.0 | 531 |
MS.gene61989.t1 | MTR_7g089610 | 62.136 | 103 | 38 | 1 | 584 | 686 | 415 | 516 | 3.96e-32 | 132 |
MS.gene61989.t1 | MTR_7g092650 | 62.100 | 438 | 154 | 8 | 1 | 432 | 27 | 458 | 0.0 | 525 |
MS.gene61989.t1 | MTR_7g095350 | 61.136 | 440 | 161 | 4 | 1 | 436 | 9 | 442 | 7.55e-180 | 522 |
MS.gene61989.t1 | MTR_7g095350 | 61.136 | 440 | 161 | 4 | 1 | 436 | 1 | 434 | 1.67e-179 | 521 |
MS.gene61989.t1 | MTR_7g095560 | 54.582 | 502 | 198 | 7 | 1 | 479 | 3 | 497 | 2.01e-178 | 524 |
MS.gene61989.t1 | MTR_7g095560 | 49.419 | 172 | 66 | 3 | 581 | 732 | 382 | 552 | 1.95e-43 | 166 |
MS.gene61989.t1 | MTR_7g095350 | 61.432 | 433 | 157 | 4 | 1 | 429 | 1 | 427 | 2.91e-177 | 514 |
MS.gene61989.t1 | MTR_3g009910 | 56.629 | 445 | 180 | 7 | 1 | 439 | 3 | 440 | 2.15e-168 | 493 |
MS.gene61989.t1 | MTR_7g089620 | 57.623 | 446 | 172 | 8 | 1 | 437 | 14 | 451 | 1.86e-162 | 477 |
MS.gene61989.t1 | MTR_7g087840 | 56.352 | 488 | 196 | 10 | 1 | 479 | 1 | 480 | 1.72e-160 | 477 |
MS.gene61989.t1 | MTR_7g087840 | 49.419 | 172 | 80 | 3 | 581 | 746 | 379 | 549 | 4.39e-42 | 162 |
MS.gene61989.t1 | MTR_7g089570 | 56.954 | 453 | 168 | 10 | 1 | 437 | 30 | 471 | 1.86e-159 | 470 |
MS.gene61989.t1 | MTR_7g087040 | 56.379 | 486 | 195 | 10 | 1 | 477 | 1 | 478 | 2.11e-156 | 479 |
MS.gene61989.t1 | MTR_7g087040 | 53.231 | 325 | 144 | 6 | 157 | 479 | 514 | 832 | 8.12e-89 | 300 |
MS.gene61989.t1 | MTR_7g087040 | 45.596 | 193 | 93 | 4 | 546 | 732 | 701 | 887 | 3.66e-39 | 156 |
MS.gene61989.t1 | MTR_7g087040 | 58.416 | 101 | 40 | 2 | 581 | 680 | 379 | 478 | 6.95e-27 | 117 |
MS.gene61989.t1 | MTR_7g105510 | 61.468 | 327 | 100 | 6 | 1 | 304 | 14 | 337 | 1.02e-126 | 381 |
MS.gene61989.t1 | MTR_2g032920 | 53.866 | 388 | 135 | 6 | 59 | 437 | 4 | 356 | 2.34e-119 | 363 |
MS.gene61989.t1 | MTR_6g071510 | 50.559 | 447 | 192 | 10 | 1 | 444 | 1 | 421 | 1.59e-117 | 372 |
MS.gene61989.t1 | MTR_6g071510 | 29.956 | 227 | 122 | 8 | 533 | 746 | 301 | 503 | 2.66e-16 | 83.6 |
MS.gene61989.t1 | MTR_6g471290 | 50.559 | 447 | 192 | 10 | 1 | 444 | 20 | 440 | 1.41e-116 | 375 |
MS.gene61989.t1 | MTR_6g471290 | 48.875 | 311 | 140 | 9 | 1 | 302 | 488 | 788 | 3.84e-68 | 243 |
MS.gene61989.t1 | MTR_6g471290 | 50.526 | 190 | 79 | 3 | 304 | 479 | 668 | 856 | 5.76e-44 | 171 |
MS.gene61989.t1 | MTR_6g471290 | 47.953 | 171 | 69 | 4 | 581 | 732 | 742 | 911 | 3.69e-37 | 150 |
MS.gene61989.t1 | MTR_0176s0050 | 52.071 | 338 | 154 | 5 | 144 | 479 | 2 | 333 | 1.88e-95 | 304 |
MS.gene61989.t1 | MTR_0176s0050 | 47.486 | 179 | 87 | 3 | 560 | 732 | 211 | 388 | 8.94e-41 | 155 |
MS.gene61989.t1 | MTR_0176s0050 | 52.226 | 337 | 153 | 5 | 144 | 478 | 2 | 332 | 5.07e-95 | 302 |
MS.gene61989.t1 | MTR_0176s0050 | 47.701 | 174 | 88 | 3 | 560 | 732 | 211 | 382 | 1.14e-39 | 152 |
MS.gene61989.t1 | MTR_0176s0050 | 51.786 | 336 | 154 | 5 | 146 | 479 | 73 | 402 | 3.85e-92 | 297 |
MS.gene61989.t1 | MTR_0176s0050 | 47.486 | 179 | 87 | 3 | 560 | 732 | 280 | 457 | 2.50e-40 | 155 |
MS.gene61989.t1 | MTR_0176s0050 | 35.385 | 325 | 151 | 10 | 1 | 275 | 1 | 316 | 1.47e-31 | 130 |
MS.gene61989.t1 | MTR_7g105980 | 62.037 | 216 | 76 | 5 | 266 | 479 | 65 | 276 | 4.71e-74 | 244 |
MS.gene61989.t1 | MTR_7g105980 | 55.975 | 159 | 61 | 3 | 583 | 736 | 178 | 332 | 4.63e-44 | 163 |
MS.gene61989.t1 | MTR_7g105980 | 34.728 | 239 | 92 | 5 | 52 | 287 | 15 | 192 | 2.29e-28 | 117 |
MS.gene61989.t1 | MTR_7g105980 | 62.381 | 210 | 73 | 5 | 272 | 479 | 1 | 206 | 4.71e-72 | 237 |
MS.gene61989.t1 | MTR_7g105980 | 55.975 | 159 | 61 | 3 | 583 | 736 | 108 | 262 | 7.49e-45 | 163 |
MS.gene61989.t1 | MTR_7g105980 | 33.835 | 133 | 73 | 2 | 158 | 287 | 2 | 122 | 9.33e-13 | 70.1 |
MS.gene61989.t1 | MTR_7g095340 | 67.956 | 181 | 52 | 3 | 1 | 176 | 1 | 180 | 2.47e-71 | 236 |
MS.gene61989.t1 | MTR_2g064400 | 47.183 | 284 | 121 | 5 | 1 | 260 | 1 | 279 | 3.96e-68 | 233 |
MS.gene61989.t1 | MTR_2g064400 | 44.526 | 137 | 74 | 2 | 579 | 715 | 291 | 425 | 8.61e-26 | 112 |
MS.gene61989.t1 | MTR_2g064400 | 37.089 | 213 | 107 | 7 | 289 | 479 | 185 | 392 | 9.84e-24 | 105 |
MS.gene61989.t1 | MTR_7g095390 | 62.791 | 172 | 57 | 3 | 1 | 166 | 1 | 171 | 4.20e-60 | 201 |
MS.gene61989.t1 | MTR_7g095310 | 54.222 | 225 | 89 | 5 | 116 | 326 | 1 | 225 | 2.68e-58 | 197 |
MS.gene61989.t1 | MTR_6g471300 | 50.926 | 216 | 98 | 6 | 229 | 442 | 23 | 232 | 6.03e-50 | 175 |
MS.gene61989.t1 | MTR_6g471300 | 51.515 | 66 | 30 | 2 | 581 | 645 | 168 | 232 | 2.62e-11 | 64.7 |
MS.gene61989.t1 | MTR_5g024120 | 40.345 | 290 | 95 | 9 | 1 | 287 | 1 | 215 | 8.88e-46 | 167 |
MS.gene61989.t1 | MTR_5g024120 | 54.237 | 118 | 51 | 3 | 319 | 434 | 138 | 254 | 1.31e-29 | 121 |
MS.gene61989.t1 | MTR_7g111110 | 69.792 | 96 | 24 | 2 | 1 | 96 | 1 | 91 | 1.65e-37 | 135 |
MS.gene61989.t1 | MTR_7g114090 | 35.473 | 296 | 170 | 7 | 11 | 287 | 6 | 299 | 1.60e-36 | 144 |
MS.gene61989.t1 | MTR_7g105520 | 58.000 | 100 | 42 | 0 | 590 | 689 | 2 | 101 | 3.06e-31 | 118 |
MS.gene61989.t1 | MTR_7g105520 | 55.769 | 104 | 46 | 0 | 387 | 490 | 2 | 105 | 1.14e-30 | 116 |
MS.gene61989.t1 | MTR_7g116580 | 31.095 | 283 | 155 | 8 | 11 | 261 | 6 | 280 | 6.68e-31 | 127 |
MS.gene61989.t1 | MTR_7g116250 | 36.522 | 230 | 119 | 6 | 11 | 215 | 6 | 233 | 3.44e-29 | 117 |
MS.gene61989.t1 | MTR_5g090500 | 35.294 | 187 | 104 | 7 | 84 | 257 | 7 | 189 | 1.20e-20 | 92.0 |
MS.gene61989.t1 | MTR_7g092110 | 51.020 | 98 | 43 | 3 | 632 | 728 | 79 | 172 | 1.78e-20 | 90.5 |
MS.gene61989.t1 | MTR_7g092110 | 65.306 | 49 | 14 | 2 | 1 | 49 | 25 | 70 | 8.22e-13 | 68.2 |
MS.gene61989.t1 | MTR_7g092110 | 65.217 | 46 | 16 | 0 | 434 | 479 | 83 | 128 | 7.11e-11 | 62.8 |
MS.gene61989.t1 | MTR_2g032940 | 78.723 | 47 | 10 | 0 | 1 | 47 | 1 | 47 | 1.50e-19 | 83.2 |
MS.gene61989.t1 | MTR_1g014450 | 27.224 | 371 | 207 | 13 | 13 | 361 | 21 | 350 | 9.21e-19 | 90.1 |
MS.gene61989.t1 | MTR_1g021820 | 28.507 | 221 | 130 | 6 | 11 | 226 | 31 | 228 | 2.44e-17 | 85.9 |
MS.gene61989.t1 | MTR_5g040850 | 28.745 | 247 | 155 | 7 | 13 | 254 | 12 | 242 | 2.99e-17 | 85.5 |
MS.gene61989.t1 | MTR_2g047858 | 29.864 | 221 | 136 | 6 | 13 | 231 | 120 | 323 | 1.10e-16 | 84.3 |
MS.gene61989.t1 | MTR_1g013630 | 31.068 | 206 | 114 | 8 | 13 | 210 | 44 | 229 | 2.53e-16 | 82.0 |
MS.gene61989.t1 | MTR_1g021825 | 31.308 | 214 | 117 | 9 | 11 | 217 | 20 | 210 | 2.76e-16 | 82.4 |
MS.gene61989.t1 | MTR_1g016310 | 27.778 | 216 | 139 | 4 | 13 | 226 | 25 | 225 | 5.51e-16 | 80.5 |
MS.gene61989.t1 | MTR_1g013580 | 31.050 | 219 | 128 | 6 | 13 | 226 | 24 | 224 | 6.47e-16 | 81.3 |
MS.gene61989.t1 | MTR_1g021825 | 31.308 | 214 | 117 | 9 | 11 | 217 | 91 | 281 | 7.48e-16 | 81.6 |
MS.gene61989.t1 | MTR_1g016310 | 27.778 | 216 | 139 | 4 | 13 | 226 | 25 | 225 | 1.78e-15 | 80.1 |
MS.gene61989.t1 | MTR_1g013610 | 26.286 | 350 | 200 | 11 | 13 | 352 | 12 | 313 | 2.28e-15 | 79.0 |
MS.gene61989.t1 | MTR_2g047872 | 27.727 | 220 | 140 | 5 | 13 | 231 | 28 | 229 | 3.04e-15 | 79.3 |
MS.gene61989.t1 | MTR_1g011410 | 28.800 | 250 | 151 | 7 | 13 | 262 | 320 | 542 | 4.88e-15 | 79.3 |
MS.gene61989.t1 | MTR_1g011430 | 28.261 | 230 | 144 | 5 | 13 | 242 | 12 | 220 | 1.98e-14 | 76.3 |
MS.gene61989.t1 | MTR_1g016340 | 28.634 | 227 | 140 | 6 | 13 | 233 | 20 | 230 | 4.37e-14 | 75.5 |
MS.gene61989.t1 | MTR_1g016340 | 28.634 | 227 | 140 | 6 | 13 | 233 | 25 | 235 | 4.76e-14 | 75.5 |
MS.gene61989.t1 | MTR_2g047848 | 27.823 | 248 | 156 | 7 | 13 | 254 | 12 | 242 | 7.36e-14 | 74.7 |
MS.gene61989.t1 | MTR_1g013840 | 29.897 | 194 | 117 | 6 | 13 | 202 | 61 | 239 | 8.46e-14 | 75.1 |
MS.gene61989.t1 | MTR_2g091145 | 27.027 | 222 | 134 | 5 | 13 | 226 | 26 | 227 | 2.10e-13 | 73.6 |
MS.gene61989.t1 | MTR_1g011400 | 29.839 | 248 | 144 | 7 | 17 | 260 | 16 | 237 | 5.80e-13 | 72.0 |
MS.gene61989.t1 | MTR_4g057725 | 27.434 | 226 | 145 | 7 | 11 | 233 | 25 | 234 | 9.24e-13 | 71.6 |
MS.gene61989.t1 | MTR_1g013560 | 27.668 | 253 | 127 | 11 | 13 | 256 | 24 | 229 | 1.20e-12 | 70.5 |
MS.gene61989.t1 | MTR_1g013560 | 27.668 | 253 | 127 | 11 | 13 | 256 | 24 | 229 | 1.63e-12 | 70.9 |
MS.gene61989.t1 | MTR_1g028860 | 28.230 | 209 | 132 | 7 | 21 | 226 | 3 | 196 | 2.92e-12 | 68.6 |
MS.gene61989.t1 | MTR_4g057860 | 50.000 | 68 | 29 | 1 | 670 | 732 | 1 | 68 | 3.05e-12 | 63.9 |
MS.gene61989.t1 | MTR_7g095660 | 48.387 | 62 | 30 | 1 | 666 | 727 | 18 | 77 | 3.76e-12 | 65.1 |
MS.gene61989.t1 | MTR_6g034190 | 25.267 | 281 | 166 | 13 | 11 | 259 | 20 | 288 | 1.67e-11 | 67.8 |
MS.gene61989.t1 | MTR_0049s0110 | 28.641 | 206 | 123 | 8 | 11 | 213 | 11 | 195 | 2.92e-11 | 65.5 |
MS.gene61989.t1 | MTR_0049s0110 | 28.641 | 206 | 123 | 8 | 11 | 213 | 11 | 195 | 4.33e-11 | 65.5 |
MS.gene61989.t1 | MTR_0049s0110 | 28.641 | 206 | 123 | 8 | 11 | 213 | 11 | 195 | 5.20e-11 | 65.5 |
MS.gene61989.t1 | MTR_0049s0110 | 28.641 | 206 | 123 | 8 | 11 | 213 | 11 | 195 | 6.33e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61989.t1 | AT1G13570 | 28.500 | 200 | 122 | 6 | 11 | 210 | 9 | 187 | 2.65e-11 | 65.9 |
MS.gene61989.t1 | AT1G13570 | 28.500 | 200 | 122 | 6 | 11 | 210 | 9 | 187 | 4.04e-11 | 66.2 |
MS.gene61989.t1 | AT1G13570 | 28.500 | 200 | 122 | 6 | 11 | 210 | 9 | 187 | 4.04e-11 | 66.2 |
MS.gene61989.t1 | AT1G61330 | 25.490 | 306 | 175 | 12 | 12 | 309 | 18 | 278 | 6.25e-11 | 65.9 |
Find 136 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTTCACGAATGGGGTTTC+AGG | 0.179139 | 7.2:-80706711 | MS.gene61989:CDS |
CTCTAAACAAATTCGTGATA+TGG | 0.210926 | 7.2:+80696350 | None:intergenic |
ATCCTAATATGGACTACTTT+TGG | 0.238750 | 7.2:-80697671 | MS.gene61989:CDS |
ATCCTAATATGGACTACTTT+TGG | 0.238750 | 7.2:-80704322 | MS.gene61989:CDS |
ATCTCAATTTGCCACAATAT+TGG | 0.241079 | 7.2:-80706599 | MS.gene61989:CDS |
TGAAGCTTCGTTCCGAGTTT+TGG | 0.249113 | 7.2:+80701167 | None:intergenic |
TGTGAATCAAGATATGTTTC+AGG | 0.253645 | 7.2:-80706263 | MS.gene61989:CDS |
TCTCGAAGTCAGTTGTGTTC+TGG | 0.268233 | 7.2:+80701191 | None:intergenic |
ACGACCGGTGAAGCTAAATT+TGG | 0.276490 | 7.2:+80706009 | None:intergenic |
TATTATAGTCAAACATGTTT+TGG | 0.278761 | 7.2:+80706668 | None:intergenic |
TAACTGTGGGATTAACATTC+AGG | 0.285610 | 7.2:-80706134 | MS.gene61989:CDS |
CAAGTTAAGTATGAAAGATT+TGG | 0.297715 | 7.2:-80706761 | MS.gene61989:CDS |
CTTTAAGCACCTCATGAATA+AGG | 0.298664 | 7.2:+80703616 | None:intergenic |
GATGGATGCAGTTGGAAAAT+AGG | 0.304259 | 7.2:+80706239 | None:intergenic |
CTCGAAGTCAGTTGTGTTCT+GGG | 0.329947 | 7.2:+80701192 | None:intergenic |
ATCCAAAAGTAGTCCATATT+AGG | 0.333779 | 7.2:+80697669 | None:intergenic |
ATCCAAAAGTAGTCCATATT+AGG | 0.333779 | 7.2:+80704320 | None:intergenic |
CAAATCTTTCATACTTAACT+TGG | 0.336894 | 7.2:+80706762 | None:intergenic |
ATTTCAAAACCTTCAACAAT+TGG | 0.355615 | 7.2:-80697718 | MS.gene61989:CDS |
ATTTCAAAACCTTCAACAAT+TGG | 0.355615 | 7.2:-80704369 | MS.gene61989:CDS |
GCTTGGATGGATGGAGAGTT+AGG | 0.358389 | 7.2:+80701259 | None:intergenic |
TCCCTATGTTGGTCACCTAA+TGG | 0.373909 | 7.2:+80706520 | None:intergenic |
GGGAGCATCTGATCCTAATA+TGG | 0.378377 | 7.2:-80697682 | MS.gene61989:CDS |
GGGAGCATCTGATCCTAATA+TGG | 0.378377 | 7.2:-80704333 | MS.gene61989:CDS |
AGATATCCACATCATCTCTT+TGG | 0.386509 | 7.2:-80698973 | MS.gene61989:CDS |
AGATATCCACATCATCTCTT+TGG | 0.386509 | 7.2:-80705626 | MS.gene61989:CDS |
TTCTCGACATGACGTGATCT+TGG | 0.398614 | 7.2:+80698943 | None:intergenic |
TTCTCGACATGACGTGATCT+TGG | 0.398614 | 7.2:+80705596 | None:intergenic |
TAACATTTAGAAAACAAGTT+AGG | 0.401981 | 7.2:+80705884 | None:intergenic |
CTCTCATCCTTTGAATATAG+TGG | 0.406219 | 7.2:-80705719 | MS.gene61989:CDS |
GGCACCCATAGCAATTCCTT+TGG | 0.410558 | 7.2:+80706477 | None:intergenic |
TACTGAAAGGATGAGAGATT+TGG | 0.413992 | 7.2:+80706085 | None:intergenic |
GCAACAACAGTTATCTCATC+TGG | 0.418118 | 7.2:+80705749 | None:intergenic |
TCTAAACAAATTCGTGATAT+GGG | 0.420824 | 7.2:+80696351 | None:intergenic |
GAATAGCAGTTCAATACGTT+TGG | 0.424083 | 7.2:+80706456 | None:intergenic |
TTAATAACTCCAATTGTTGA+AGG | 0.427707 | 7.2:+80697709 | None:intergenic |
TTAATAACTCCAATTGTTGA+AGG | 0.427707 | 7.2:+80704360 | None:intergenic |
ATATTGTGGCAAATTGAGAT+TGG | 0.429203 | 7.2:+80706602 | None:intergenic |
CCAGGCACTTACCGGGTAGA+TGG | 0.432129 | 7.2:+80701118 | None:intergenic |
GAAACAATGGCTTCACGAAT+GGG | 0.433081 | 7.2:-80706719 | MS.gene61989:CDS |
AATGATTCTGCAATTCTTGA+AGG | 0.434167 | 7.2:+80705844 | None:intergenic |
GCAATAAGATATCATTCATC+AGG | 0.437085 | 7.2:-80703342 | MS.gene61989:intron |
TCTATATAGGTGCCGAAAGA+TGG | 0.444813 | 7.2:-80703674 | MS.gene61989:intron |
GAAAATTTACTCGGATAGAA+TGG | 0.454620 | 7.2:+80706542 | None:intergenic |
TTCCATTAGGTGACCAACAT+AGG | 0.463838 | 7.2:-80706522 | MS.gene61989:CDS |
CAAATGAAACAATGTTGAAC+TGG | 0.468911 | 7.2:+80706165 | None:intergenic |
TAAAGCTCCAAGGTTATTGA+AGG | 0.471745 | 7.2:-80699022 | MS.gene61989:CDS |
TAAAGCTCCAAGGTTATTGA+AGG | 0.471745 | 7.2:-80705675 | MS.gene61989:CDS |
GGCGAACTTAACGAAGGTCT+TGG | 0.471991 | 7.2:-80704396 | MS.gene61989:CDS |
TTGTCCAAATTTAGCTTCAC+CGG | 0.475825 | 7.2:-80706013 | MS.gene61989:CDS |
GTAGCACCAATGGACTTCTC+TGG | 0.477151 | 7.2:-80706325 | MS.gene61989:CDS |
ATCAGAGAGAAGGGTGGTGG+TGG | 0.488094 | 7.2:+80696397 | None:intergenic |
CGAAACAATGGCTTCACGAA+TGG | 0.489107 | 7.2:-80706720 | MS.gene61989:CDS |
CTACTAGGAGGCATTTCTCT+AGG | 0.492470 | 7.2:+80706344 | None:intergenic |
GTGTCAGATAAGAGAGCAAA+GGG | 0.497308 | 7.2:+80706388 | None:intergenic |
TTTAATCCAGAAAATCCAAC+CGG | 0.499355 | 7.2:+80705965 | None:intergenic |
AGAGCAAAGGGAAATTTGTA+TGG | 0.501584 | 7.2:+80706400 | None:intergenic |
GATTTCCAAAGGAATTGCTA+TGG | 0.504539 | 7.2:-80706482 | MS.gene61989:CDS |
ATGTAAGATACAATACAATC+AGG | 0.507879 | 7.2:+80706790 | None:intergenic |
AGAAGTCCATTGGTGCTACT+AGG | 0.508255 | 7.2:+80706329 | None:intergenic |
ATTTGAACATTGTTAACTGT+GGG | 0.508598 | 7.2:-80706147 | MS.gene61989:CDS |
TTCTAAATGTTACCAACTTG+AGG | 0.510663 | 7.2:-80705873 | MS.gene61989:CDS |
TCCATTAGGTGACCAACATA+GGG | 0.510943 | 7.2:-80706521 | MS.gene61989:CDS |
ATTGACAAATTGATTTCCAA+AGG | 0.513431 | 7.2:-80706493 | MS.gene61989:CDS |
CTTGATAGTGACGGCTTGGA+TGG | 0.514955 | 7.2:+80701246 | None:intergenic |
TATGATCATGATGCCTTCAC+AGG | 0.517005 | 7.2:-80698914 | MS.gene61989:intron |
TATGATCATGATGCCTTCAC+AGG | 0.517005 | 7.2:-80705567 | MS.gene61989:intron |
TACTCGGATAGAATGGATCA+TGG | 0.521052 | 7.2:+80706549 | None:intergenic |
ATTTCCAAAGGAATTGCTAT+GGG | 0.526187 | 7.2:-80706481 | MS.gene61989:CDS |
AAGGCTTGATAGTGACGGCT+TGG | 0.527265 | 7.2:+80701242 | None:intergenic |
CACCTAATGGAAAATTTACT+CGG | 0.528311 | 7.2:+80706533 | None:intergenic |
AGATGAAGTTACAGTCATCA+AGG | 0.531162 | 7.2:+80706203 | None:intergenic |
CAAGGGTGAAGTCTTGAAGA+TGG | 0.534656 | 7.2:+80706221 | None:intergenic |
TGTCAATGACATCCCTATGT+TGG | 0.535171 | 7.2:+80706509 | None:intergenic |
AGCAGAGTCATCAGAGAGAA+GGG | 0.537347 | 7.2:+80696388 | None:intergenic |
GTGAATCAAGATATGTTTCA+GGG | 0.541282 | 7.2:-80706262 | MS.gene61989:CDS |
ATAGTGACGGCTTGGATGGA+TGG | 0.541537 | 7.2:+80701250 | None:intergenic |
TTGAATCCAGAGAAGTCCAT+TGG | 0.541899 | 7.2:+80706319 | None:intergenic |
TGAAGGTGACATCCTCAAGT+TGG | 0.544021 | 7.2:+80705861 | None:intergenic |
GTCATCAGAGAGAAGGGTGG+TGG | 0.545066 | 7.2:+80696394 | None:intergenic |
CATAGGCAAAGAAGAGAACA+TGG | 0.546734 | 7.2:-80697183 | MS.gene61989:CDS |
GAGCAGAGTCATCAGAGAGA+AGG | 0.549430 | 7.2:+80696387 | None:intergenic |
TTTGACTGACTCACCTGTGA+AGG | 0.553774 | 7.2:+80698901 | None:intergenic |
TTTGACTGACTCACCTGTGA+AGG | 0.553774 | 7.2:+80705554 | None:intergenic |
GTGTTCTGGGACGAGAGGAC+GGG | 0.556010 | 7.2:+80701205 | None:intergenic |
ATTTATTTGCAGCAATGAAG+AGG | 0.562615 | 7.2:-80706843 | None:intergenic |
ATTAGAAATTCACATGTGGA+TGG | 0.563552 | 7.2:-80697210 | MS.gene61989:CDS |
TGTGTTCTGGGACGAGAGGA+CGG | 0.564489 | 7.2:+80701204 | None:intergenic |
CATTTGAACATTGTTAACTG+TGG | 0.570732 | 7.2:-80706148 | MS.gene61989:CDS |
AAATGTGACAACAATTGTGT+TGG | 0.571151 | 7.2:-80705942 | MS.gene61989:CDS |
TGTGTCAGATAAGAGAGCAA+AGG | 0.573017 | 7.2:+80706387 | None:intergenic |
AACTTCATGTTAAAGCTCCA+AGG | 0.573437 | 7.2:-80699032 | MS.gene61989:CDS |
AACTTCATGTTAAAGCTCCA+AGG | 0.573437 | 7.2:-80705685 | MS.gene61989:CDS |
GTGACAACAATTGTGTTGGA+TGG | 0.573798 | 7.2:-80705938 | MS.gene61989:CDS |
CACATGTGGATGGATCTCAT+AGG | 0.576807 | 7.2:-80697200 | MS.gene61989:CDS |
TGTGTAGCCACTATATTCAA+AGG | 0.577002 | 7.2:+80705712 | None:intergenic |
ACAATTGGAGTTATTAATCG+AGG | 0.578365 | 7.2:-80697703 | MS.gene61989:CDS |
ACAATTGGAGTTATTAATCG+AGG | 0.578365 | 7.2:-80704354 | MS.gene61989:CDS |
CTAAAGTCCGTCCATCTACC+CGG | 0.580019 | 7.2:-80701129 | MS.gene61989:intron |
TAGAATGGATCATGGGACCT+TGG | 0.583139 | 7.2:+80706557 | None:intergenic |
TCTCAGAAAACTTTCTCTAA+CGG | 0.585159 | 7.2:-80697619 | MS.gene61989:intron |
TCTCAGAAAACTTTCTCTAA+CGG | 0.585159 | 7.2:-80704270 | MS.gene61989:intron |
GGCTAACTCAATCACATCCA+TGG | 0.586528 | 7.2:+80697107 | None:intergenic |
TTGAAATATGTCGAGTTACG+TGG | 0.593759 | 7.2:-80697141 | MS.gene61989:CDS |
CAATTGGAGTTATTAATCGA+GGG | 0.598215 | 7.2:-80697702 | MS.gene61989:CDS |
CAATTGGAGTTATTAATCGA+GGG | 0.598215 | 7.2:-80704353 | MS.gene61989:CDS |
ATCAATACTAGAATACTGAA+AGG | 0.599372 | 7.2:+80706072 | None:intergenic |
ATGCCTCCTAGTAGCACCAA+TGG | 0.599548 | 7.2:-80706335 | MS.gene61989:CDS |
CATGAATTGATCCAATATTG+TGG | 0.603152 | 7.2:+80706588 | None:intergenic |
ACGGGAAGCTGAGGATCGAA+AGG | 0.603856 | 7.2:+80701223 | None:intergenic |
GTGGGATTAACATTCAGGAT+AGG | 0.605544 | 7.2:-80706129 | MS.gene61989:CDS |
GACGAGAGGACGGGAAGCTG+AGG | 0.609638 | 7.2:+80701214 | None:intergenic |
CTAGCACATTGTCGAAACAA+TGG | 0.613854 | 7.2:-80706732 | MS.gene61989:CDS |
ATTGCACCAAAGAGATGATG+TGG | 0.620114 | 7.2:+80698967 | None:intergenic |
ATTGCACCAAAGAGATGATG+TGG | 0.620114 | 7.2:+80705620 | None:intergenic |
ACTCGGATAGAATGGATCAT+GGG | 0.621990 | 7.2:+80706550 | None:intergenic |
AAACAATGGCTTCACGAATG+GGG | 0.623832 | 7.2:-80706718 | MS.gene61989:CDS |
TGATCGTAACCTTATTCATG+AGG | 0.624197 | 7.2:-80703625 | MS.gene61989:intron |
AGCGAACTTAACGAAGGTCA+TGG | 0.627018 | 7.2:-80697745 | MS.gene61989:CDS |
ATCGAAAGGCTTGATAGTGA+CGG | 0.627360 | 7.2:+80701237 | None:intergenic |
GCACTTACCGGGTAGATGGA+CGG | 0.630205 | 7.2:+80701122 | None:intergenic |
GATGAAGTTACAGTCATCAA+GGG | 0.634531 | 7.2:+80706204 | None:intergenic |
AGTCCATTGGTGCTACTAGG+AGG | 0.635039 | 7.2:+80706332 | None:intergenic |
CAGTTGTGTTCTGGGACGAG+AGG | 0.638256 | 7.2:+80701200 | None:intergenic |
TTGAATATAGTGGCTACACA+AGG | 0.643677 | 7.2:-80699056 | MS.gene61989:intron |
TTGAATATAGTGGCTACACA+AGG | 0.643677 | 7.2:-80705709 | MS.gene61989:CDS |
TCAGATTAGAAATTCACATG+TGG | 0.645312 | 7.2:-80697214 | MS.gene61989:intron |
TGATGAATGATATCTTATTG+CGG | 0.646508 | 7.2:+80703344 | None:intergenic |
TGACTTCGAGATCCAAAACT+CGG | 0.646840 | 7.2:-80701179 | MS.gene61989:CDS |
ACGTGGTTGTGTTTGCACCA+TGG | 0.649381 | 7.2:-80697124 | MS.gene61989:CDS |
GTCTTGAAGATGGATGCAGT+TGG | 0.666721 | 7.2:+80706231 | None:intergenic |
CATTTGAAAATAATTGACTG+TGG | 0.673749 | 7.2:-80705788 | MS.gene61989:CDS |
CAATTCATGATGCATTACCA+AGG | 0.695900 | 7.2:-80706574 | MS.gene61989:CDS |
AGAGTCATCAGAGAGAAGGG+TGG | 0.709034 | 7.2:+80696391 | None:intergenic |
ACAGATAGCGAACTTAACGA+AGG | 0.713983 | 7.2:-80697751 | MS.gene61989:intron |
ACAGATGGCGAACTTAACGA+AGG | 0.731190 | 7.2:-80704402 | MS.gene61989:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 80696352 | 80706851 | 80696352 | ID=MS.gene61989 |
chr7.2 | mRNA | 80696352 | 80706851 | 80696352 | ID=MS.gene61989.t1;Parent=MS.gene61989 |
chr7.2 | exon | 80705568 | 80706851 | 80705568 | ID=MS.gene61989.t1.exon1;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80705568 | 80706851 | 80705568 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80704271 | 80704420 | 80704271 | ID=MS.gene61989.t1.exon2;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80704271 | 80704420 | 80704271 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80703626 | 80703687 | 80703626 | ID=MS.gene61989.t1.exon3;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80703626 | 80703687 | 80703626 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80703343 | 80703398 | 80703343 | ID=MS.gene61989.t1.exon4;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80703343 | 80703398 | 80703343 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80701130 | 80701316 | 80701130 | ID=MS.gene61989.t1.exon5;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80701130 | 80701316 | 80701130 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80698915 | 80699068 | 80698915 | ID=MS.gene61989.t1.exon6;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80698915 | 80699068 | 80698915 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80697620 | 80697769 | 80697620 | ID=MS.gene61989.t1.exon7;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80697620 | 80697769 | 80697620 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80697114 | 80697232 | 80697114 | ID=MS.gene61989.t1.exon8;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80697114 | 80697232 | 80697114 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
chr7.2 | exon | 80696352 | 80696451 | 80696352 | ID=MS.gene61989.t1.exon9;Parent=MS.gene61989.t1 |
chr7.2 | CDS | 80696352 | 80696451 | 80696352 | ID=cds.MS.gene61989.t1;Parent=MS.gene61989.t1 |
Gene Sequence |
Protein sequence |