AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62852

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62852.t1 MTR_4g101990 97.892 332 7 0 1 332 1 332 0.0 647
MS.gene62852.t1 MTR_7g074935 53.107 354 120 10 1 330 1 332 1.27e-90 274
MS.gene62852.t1 MTR_8g036160 48.603 358 153 5 1 330 1 355 6.36e-78 242
MS.gene62852.t1 MTR_1g076710 51.890 291 96 10 9 282 8 271 7.37e-73 229
MS.gene62852.t1 MTR_5g011680 44.295 298 119 8 16 284 5 284 4.24e-62 199
MS.gene62852.t1 MTR_5g011620 47.292 277 122 5 15 291 4 256 9.69e-60 204
MS.gene62852.t1 MTR_1g061530 49.321 221 99 7 72 284 65 280 1.46e-59 195
MS.gene62852.t1 MTR_6g061670 51.786 224 89 7 64 276 43 258 1.61e-55 184
MS.gene62852.t1 MTR_6g061670 52.273 220 89 7 64 276 43 253 3.21e-55 182
MS.gene62852.t1 MTR_8g031100 50.952 210 94 4 65 273 82 283 1.32e-54 182
MS.gene62852.t1 MTR_5g010330 49.515 206 91 6 72 277 70 262 1.68e-51 173
MS.gene62852.t1 MTR_8g098390 47.887 213 104 4 62 273 87 293 6.90e-51 172
MS.gene62852.t1 MTR_5g011610 60.000 150 52 2 144 291 56 199 2.95e-46 160
MS.gene62852.t1 MTR_5g011610 55.140 107 44 1 133 239 201 303 3.01e-27 109
MS.gene62852.t1 MTR_7g077120 41.935 279 135 8 61 327 80 343 9.85e-46 159
MS.gene62852.t1 MTR_4g055803 40.000 255 136 8 22 269 10 254 4.32e-41 149
MS.gene62852.t1 MTR_4g055833 39.689 257 131 9 22 269 10 251 4.69e-39 141
MS.gene62852.t1 MTR_4g098460 60.331 121 46 2 141 261 78 196 3.26e-37 135
MS.gene62852.t1 MTR_4g098460 57.937 126 46 3 141 261 78 201 7.23e-35 129
MS.gene62852.t1 MTR_1g079780 38.942 208 116 4 54 260 25 222 7.41e-34 127
MS.gene62852.t1 MTR_7g116320 43.939 198 104 2 70 267 72 262 9.08e-34 127
MS.gene62852.t1 MTR_4g055813 51.163 129 57 3 144 269 19 144 3.46e-32 121
MS.gene62852.t1 MTR_7g116320 44.149 188 98 2 70 257 72 252 2.76e-31 119
MS.gene62852.t1 MTR_6g060670 40.351 228 113 8 43 269 91 296 4.16e-31 119
MS.gene62852.t1 MTR_1g038960 40.291 206 103 8 59 260 74 263 3.36e-29 115
MS.gene62852.t1 MTR_5g013390 38.220 191 106 6 72 260 81 261 1.17e-27 110
MS.gene62852.t1 MTR_5g014360 39.062 192 104 6 73 260 121 303 1.44e-26 108
MS.gene62852.t1 MTR_4g055705 35.644 202 113 6 72 259 56 254 3.01e-26 106
MS.gene62852.t1 MTR_1g038990 36.842 190 91 8 72 260 82 243 1.69e-23 99.0
MS.gene62852.t1 MTR_5g011600 43.548 124 60 2 196 318 3 117 1.90e-22 90.9
MS.gene62852.t1 MTR_5g041430 43.548 124 65 3 135 256 102 222 1.96e-22 96.3
MS.gene62852.t1 MTR_3g023560 41.481 135 69 4 132 260 47 177 1.30e-20 89.7
MS.gene62852.t1 MTR_3g100470 38.400 125 75 2 144 267 101 224 2.41e-19 87.0
MS.gene62852.t1 MTR_3g068035 43.548 124 65 2 147 270 109 227 6.91e-19 85.9
MS.gene62852.t1 MTR_3g116100 43.363 113 59 3 155 267 154 261 3.59e-18 84.3
MS.gene62852.t1 MTR_5g066020 38.806 134 73 4 145 272 81 211 7.06e-18 82.0
MS.gene62852.t1 MTR_5g091630 30.804 224 129 3 71 277 6 220 1.13e-16 79.0
MS.gene62852.t1 MTR_5g011590 33.520 179 67 5 16 193 4 131 8.07e-16 73.6
MS.gene62852.t1 MTR_5g011700 43.925 107 55 3 155 260 10 112 9.99e-16 74.7
MS.gene62852.t1 MTR_4g098450 43.860 114 60 1 147 260 106 215 1.77e-15 76.3
MS.gene62852.t1 MTR_1g044155 41.129 124 68 2 147 270 156 274 4.50e-15 75.5
MS.gene62852.t1 MTR_7g080980 45.614 114 58 1 147 260 87 196 4.69e-15 74.3
MS.gene62852.t1 MTR_1g073860 42.105 114 62 1 147 260 124 233 1.46e-14 73.6
MS.gene62852.t1 MTR_5g011520 42.982 114 61 1 147 260 130 239 4.68e-14 72.4
MS.gene62852.t1 MTR_8g036060 43.860 114 60 1 147 260 116 225 8.84e-14 71.2
MS.gene62852.t1 MTR_1g079810 40.351 114 64 1 147 260 104 213 1.55e-12 67.8
MS.gene62852.t1 MTR_5g080580 39.024 123 70 2 148 270 120 237 1.37e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62852.t1 AT4G12080 60.393 356 109 16 1 329 5 355 1.36e-123 359
MS.gene62852.t1 AT4G22770 53.254 338 137 9 1 329 8 333 2.50e-95 286
MS.gene62852.t1 AT4G22770 53.254 338 137 9 1 329 8 333 2.50e-95 286
MS.gene62852.t1 AT4G25320 59.420 207 71 5 72 268 86 289 2.06e-72 230
MS.gene62852.t1 AT5G62260 57.604 217 76 6 70 274 74 286 7.00e-69 221
MS.gene62852.t1 AT5G62260 57.604 217 76 6 70 274 74 286 7.00e-69 221
MS.gene62852.t1 AT4G00200 52.281 285 93 12 1 274 1 253 4.72e-65 208
MS.gene62852.t1 AT4G00200 52.281 285 93 12 1 274 1 253 4.72e-65 208
MS.gene62852.t1 AT5G62260 54.930 213 83 5 61 261 65 276 8.46e-65 206
MS.gene62852.t1 AT5G51590 55.455 220 69 4 72 263 78 296 1.27e-64 210
MS.gene62852.t1 AT2G33620 50.435 230 98 7 70 298 95 309 5.39e-58 191
MS.gene62852.t1 AT2G33620 50.435 230 98 7 70 298 95 309 5.39e-58 191
MS.gene62852.t1 AT2G33620 50.435 230 98 7 70 298 95 309 5.39e-58 191
MS.gene62852.t1 AT2G33620 50.435 230 98 7 70 298 95 309 5.39e-58 191
MS.gene62852.t1 AT1G63470 52.062 194 87 4 72 263 105 294 1.52e-55 185
MS.gene62852.t1 AT2G45850 49.754 203 93 3 59 261 85 278 6.02e-53 178
MS.gene62852.t1 AT2G45850 49.754 203 93 3 59 261 85 278 6.02e-53 178
MS.gene62852.t1 AT3G61310 53.403 191 77 5 72 261 101 280 8.48e-51 172
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 99 288 1.71e-50 172
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 99 288 1.71e-50 172
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 93 282 1.83e-50 171
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 93 282 1.83e-50 171
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 93 282 1.83e-50 171
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 93 282 1.83e-50 171
MS.gene62852.t1 AT1G63480 47.291 203 94 4 72 274 93 282 1.83e-50 171
MS.gene62852.t1 AT2G45850 48.515 202 95 3 59 260 85 277 1.01e-49 167
MS.gene62852.t1 AT4G17950 39.837 246 103 7 72 285 131 363 7.15e-43 154
MS.gene62852.t1 AT5G46640 47.143 210 78 6 72 262 102 297 6.30e-40 144
MS.gene62852.t1 AT3G04590 43.229 192 99 3 70 261 103 284 1.57e-39 142
MS.gene62852.t1 AT3G04590 43.455 191 98 3 70 260 103 283 2.23e-38 141
MS.gene62852.t1 AT2G36560 42.975 121 68 1 141 260 102 222 1.94e-25 107
MS.gene62852.t1 AT3G60870 32.632 190 107 5 72 260 27 196 1.04e-18 84.7
MS.gene62852.t1 AT5G49700 36.765 136 82 3 144 275 83 218 1.19e-17 82.0
MS.gene62852.t1 AT1G14490 38.235 136 76 3 145 272 31 166 1.22e-16 77.8
MS.gene62852.t1 AT1G14490 38.235 136 76 3 145 272 50 185 1.69e-16 77.8
MS.gene62852.t1 AT2G42940 44.248 113 59 1 149 261 85 193 4.51e-16 77.4
MS.gene62852.t1 AT5G28590 41.322 121 46 3 140 260 26 121 7.29e-15 73.2
MS.gene62852.t1 AT4G14465 39.231 130 74 2 147 276 97 221 3.17e-14 72.4
MS.gene62852.t1 AT4G17800 42.982 114 61 1 147 260 112 221 3.20e-14 72.4
MS.gene62852.t1 AT3G55560 41.228 114 64 1 147 260 118 228 4.38e-14 72.4
MS.gene62852.t1 AT2G35270 42.105 114 62 1 147 260 108 217 6.97e-14 71.2
MS.gene62852.t1 AT3G04570 39.344 122 62 2 147 260 110 227 6.32e-13 68.9
MS.gene62852.t1 AT1G76500 36.585 123 65 2 147 260 102 220 7.71e-13 68.6
MS.gene62852.t1 AT4G22810 41.026 117 62 2 147 260 135 247 2.25e-11 64.3
MS.gene62852.t1 AT2G45430 41.525 118 61 3 147 260 119 232 2.79e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGTCAGCCCGATTCTTC+TGG 0.153062 8.1:-21715018 MS.gene62852:CDS
ACATCATGCTTCTGATTTCT+TGG 0.217240 8.1:+21714177 None:intergenic
GGAGTTTGGTTGTCTGTTCT+TGG 0.245727 8.1:+21718273 None:intergenic
TTTGAAATTCTGTCTTTATC+TGG 0.274522 8.1:-21714791 MS.gene62852:CDS
CTTCCTCTCTTCTTCTTCTC+TGG 0.315470 8.1:+21718141 None:intergenic
TTCGTCAGCCCGATTCTTCT+GGG 0.316075 8.1:-21715017 MS.gene62852:CDS
GATATTAATGTGTCTCTTCC+TGG 0.316878 8.1:-21714015 MS.gene62852:CDS
CTTCCTTCCGTGGAGATAAT+TGG 0.333200 8.1:-21714080 MS.gene62852:CDS
GTTCCTCCTCCACTTTCATT+TGG 0.347793 8.1:+21714758 None:intergenic
CTGATCCGGTGGTCGGAGTT+TGG 0.366555 8.1:+21718259 None:intergenic
AGGCGGCATGAGTGTGTCTT+TGG 0.382271 8.1:-21714723 MS.gene62852:CDS
CGGAGGAGTAGCTGGTTTGT+TGG 0.386323 8.1:-21714675 MS.gene62852:CDS
AGAAAATGAAATAACCTTCA+TGG 0.401967 8.1:+21715101 None:intergenic
GAGGCTAGTGGTGGTGTTAG+TGG 0.403429 8.1:-21718345 MS.gene62852:CDS
GAATGGGTCCCTTGCTCTGT+TGG 0.411486 8.1:-21715438 MS.gene62852:CDS
GGCGGTGGTAACGGCGTCTC+CGG 0.413422 8.1:-21718178 MS.gene62852:CDS
GCCGCCGGTGATTGATTTCA+CGG 0.413441 8.1:-21718043 MS.gene62852:CDS
TCCGCTACAACCGCCGTATA+CGG 0.418635 8.1:-21718199 MS.gene62852:CDS
TTATCCTTTGCATCCGATGC+TGG 0.421865 8.1:+21714048 None:intergenic
AAATTTGAGTTGGAAAATAT+AGG 0.440668 8.1:-21717973 MS.gene62852:intron
GGAGGAACACGAAGCAGATC+AGG 0.444348 8.1:-21714743 MS.gene62852:CDS
GTTGTTGGCGGAGGAGTAGC+TGG 0.461135 8.1:-21714683 MS.gene62852:CDS
GTATGCATTCTTTCAGCAAA+TGG 0.463040 8.1:-21715060 MS.gene62852:CDS
AACGGAGCAGACGACGATAT+CGG 0.463859 8.1:+21718066 None:intergenic
TGGTGTTAGTGGTGGCGTTA+CGG 0.465659 8.1:-21718334 MS.gene62852:CDS
TAAAAGCTGAACCGCTGATC+CGG 0.473642 8.1:+21718245 None:intergenic
AGTCCTGATGGACGTGTTGT+TGG 0.477746 8.1:-21714698 MS.gene62852:CDS
GCCGTTACCACCGCCGTATA+CGG 0.484752 8.1:+21718186 None:intergenic
TTCTTGGCTTCTGCTCATGT+TGG 0.484881 8.1:+21714193 None:intergenic
CCGCCAACAACACGTCCATC+AGG 0.492937 8.1:+21714695 None:intergenic
GAGCAAAACGAAATTTGAGT+TGG 0.494483 8.1:-21717983 MS.gene62852:CDS
GTAGGGATGGGAACAACAGC+AGG 0.496848 8.1:+21714135 None:intergenic
CACATCATCACTGTTAATGC+TGG 0.504861 8.1:-21715399 MS.gene62852:CDS
GATAGAATAAATACCTGCAC+TGG 0.507918 8.1:+21714641 None:intergenic
GAAGTTACTGATGATAGAAT+AGG 0.508118 8.1:+21714099 None:intergenic
TACTGGATCAAGAGTAGGGA+TGG 0.511973 8.1:+21714122 None:intergenic
GCAGACGACGATATCGGCTT+CGG 0.515428 8.1:+21718072 None:intergenic
TCCTTATGAAATTAGCCTCC+AGG 0.516288 8.1:+21713997 None:intergenic
AAATCAATCACCGGCGGCAA+CGG 0.516482 8.1:+21718048 None:intergenic
ATGTTAGGATGTTACCATGA+AGG 0.517184 8.1:-21715115 MS.gene62852:intron
GTCGTCTGCTCCGTTGCCGC+CGG 0.518072 8.1:-21718058 MS.gene62852:CDS
ACTGATGATAGAATAGGTAC+TGG 0.519373 8.1:+21714105 None:intergenic
AGTGGTGGCGTTACGGTGGT+CGG 0.531800 8.1:-21718327 MS.gene62852:CDS
TCTGGCACCGTCGTAACTGC+CGG 0.535791 8.1:+21718159 None:intergenic
GCCGTATACGGCGGTGGTAA+CGG 0.539445 8.1:-21718187 MS.gene62852:CDS
TCGTCAGCCCGATTCTTCTG+GGG 0.541650 8.1:-21715016 MS.gene62852:CDS
CAGCATTAACAGTGATGATG+TGG 0.544475 8.1:+21715400 None:intergenic
AGGAGTAGCTGGTTTGTTGG+TGG 0.545177 8.1:-21714672 MS.gene62852:CDS
ATAGGTACTGGATCAAGAGT+AGG 0.547053 8.1:+21714117 None:intergenic
CCTGATGGACGTGTTGTTGG+CGG 0.547329 8.1:-21714695 MS.gene62852:CDS
GGTGGCTGCAAGTCCAGTGC+AGG 0.550883 8.1:-21714654 MS.gene62852:intron
ATGCCAAATGAAAGTGGAGG+AGG 0.551611 8.1:-21714761 MS.gene62852:CDS
GTGTCTTTGGCAAGTCCTGA+TGG 0.556787 8.1:-21714710 MS.gene62852:CDS
TCGTTCATGCCAAATGAAAG+TGG 0.559940 8.1:-21714767 MS.gene62852:CDS
GACAACCAAACTCCGACCAC+CGG 0.563057 8.1:-21718264 MS.gene62852:CDS
AAATTTGAACCAACAGAGCA+AGG 0.567744 8.1:+21715429 None:intergenic
GCCGTATACGGCGGTTGTAG+CGG 0.576643 8.1:+21718198 None:intergenic
TAGGTACTGGATCAAGAGTA+GGG 0.580504 8.1:+21714118 None:intergenic
AACTCCGACCACCGGATCAG+CGG 0.581732 8.1:-21718256 MS.gene62852:CDS
CGTCAGCCCGATTCTTCTGG+GGG 0.586127 8.1:-21715015 MS.gene62852:CDS
GACACATTAATATCAGCAGC+GGG 0.589557 8.1:+21714024 None:intergenic
CATCACTGTTAATGCTGGAG+AGG 0.596487 8.1:-21715394 MS.gene62852:intron
AATTTGAACCAACAGAGCAA+GGG 0.597677 8.1:+21715430 None:intergenic
ACAACCGCCGTATACGGCGG+TGG 0.597858 8.1:-21718193 MS.gene62852:CDS
TTGGTCTGCTGTGCCAGCAT+CGG 0.597910 8.1:-21714061 MS.gene62852:CDS
GGCGTCTCCGGCAGTTACGA+CGG 0.598191 8.1:-21718166 MS.gene62852:CDS
AAGCTGAACCGCTGATCCGG+TGG 0.604731 8.1:+21718248 None:intergenic
GATGGACGTGTTGTTGGCGG+AGG 0.605100 8.1:-21714692 MS.gene62852:CDS
TGTGCCAGCATCGGATGCAA+AGG 0.609579 8.1:-21714052 MS.gene62852:CDS
TCATCAGTAACTTCCTTCCG+TGG 0.610671 8.1:-21714090 MS.gene62852:CDS
GAAAGAATGCATACCGCTCG+AGG 0.613852 8.1:+21715069 None:intergenic
TCCGCCGTGAAATCAATCAC+CGG 0.617619 8.1:+21718039 None:intergenic
TGAACCGCTGATCCGGTGGT+CGG 0.619667 8.1:+21718252 None:intergenic
CCGAGAAAATATGCAGCGGA+TGG 0.621272 8.1:-21718117 MS.gene62852:CDS
GCTAGTGGTGGTGTTAGTGG+TGG 0.622164 8.1:-21718342 MS.gene62852:CDS
GGTCGGATCAGATGCTCCGT+CGG 0.623317 8.1:-21718310 MS.gene62852:CDS
TGTATCTACCAGGTAGTGGT+TGG 0.624215 8.1:-21714234 MS.gene62852:intron
GTGCCAGAGAAGAAGAAGAG+AGG 0.624418 8.1:-21718144 MS.gene62852:CDS
GTATACGGCGGTTGTAGCGG+AGG 0.633513 8.1:+21718201 None:intergenic
AGACCAATTATCTCCACGGA+AGG 0.635192 8.1:+21714077 None:intergenic
TTCTCAGCAAGGACCTCGAG+CGG 0.641808 8.1:-21715082 MS.gene62852:CDS
AGCATTAACAGTGATGATGT+GGG 0.643782 8.1:+21715401 None:intergenic
ACTGGATCAAGAGTAGGGAT+GGG 0.644029 8.1:+21714123 None:intergenic
CAGCAGACCAATTATCTCCA+CGG 0.646524 8.1:+21714073 None:intergenic
GGAGCCACGTGGTACTCCGA+CGG 0.654960 8.1:+21718294 None:intergenic
AGACACATTAATATCAGCAG+CGG 0.659162 8.1:+21714023 None:intergenic
AACAACAGCAGGAGATGACA+CGG 0.660123 8.1:+21714146 None:intergenic
AGCGGATGGTTCAGTGACAG+CGG 0.663385 8.1:-21718103 MS.gene62852:CDS
GCTACAACCGCCGTATACGG+CGG 0.665689 8.1:-21718196 MS.gene62852:CDS
GGAACACGAAGCAGATCAGG+CGG 0.674892 8.1:-21714740 MS.gene62852:CDS
AAGAAATCAGAAGCATGATG+TGG 0.682976 8.1:-21714175 MS.gene62852:CDS
ATTAATGTGTCTCTTCCTGG+AGG 0.686956 8.1:-21714012 MS.gene62852:CDS
GTTACCACCGCCGTATACGG+CGG 0.693943 8.1:+21718189 None:intergenic
TGTTAGTGGTGGCGTTACGG+TGG 0.696342 8.1:-21718331 MS.gene62852:CDS
TTTGAAAACATGGAGGCTAG+TGG 0.706034 8.1:-21718357 None:intergenic
GAAAACATGGAGGCTAGTGG+TGG 0.706697 8.1:-21718354 None:intergenic
GCCGTGAAATCAATCACCGG+CGG 0.714414 8.1:+21718042 None:intergenic
AAGACCGAGAAAATATGCAG+CGG 0.716009 8.1:-21718121 MS.gene62852:CDS
TTCATGCCAAATGAAAGTGG+AGG 0.721594 8.1:-21714764 MS.gene62852:CDS
TGCTCCGTCGGAGTACCACG+TGG 0.724270 8.1:-21718298 MS.gene62852:CDS
GCATTAACAGTGATGATGTG+GGG 0.743775 8.1:+21715402 None:intergenic
TGTCTGTTCTTGGAGCCACG+TGG 0.751370 8.1:+21718283 None:intergenic
GCCGGTGATTGATTTCACGG+CGG 0.764503 8.1:-21718040 MS.gene62852:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTCAAATTCTTAATT+TGG - chr8.1:21716802-21716821 MS.gene62852:intron 10.0%
!! AATTAAAAGTTAAACAAAAA+GGG + chr8.1:21716389-21716408 None:intergenic 10.0%
!!! TCTATTTTATATTTTACTAA+TGG - chr8.1:21716131-21716150 MS.gene62852:intron 10.0%
!! AGAATATTGAAAATTGAATT+TGG + chr8.1:21715649-21715668 None:intergenic 15.0%
!! GAATTAAAAGTTAAACAAAA+AGG + chr8.1:21716390-21716409 None:intergenic 15.0%
!! TAATTAGATAGTATCAATTA+AGG + chr8.1:21715490-21715509 None:intergenic 15.0%
!!! TGTTAACATTTACATTTTTT+AGG - chr8.1:21716894-21716913 MS.gene62852:intron 15.0%
!!! TTTGTAATTCTCTAAAAATT+TGG - chr8.1:21716496-21716515 MS.gene62852:intron 15.0%
!! AAAGACTTAAATATTATTGC+GGG - chr8.1:21714902-21714921 MS.gene62852:intron 20.0%
!! AATGAAGTGATGATAAAATT+AGG - chr8.1:21717071-21717090 MS.gene62852:intron 20.0%
!! AATTAACTCAAAACAATGTA+TGG + chr8.1:21716353-21716372 None:intergenic 20.0%
!! ACTATTTCAATATCTTAGTT+TGG - chr8.1:21716047-21716066 MS.gene62852:intron 20.0%
!! ATATGTAAAAGCAGAAATTT+GGG + chr8.1:21716453-21716472 None:intergenic 20.0%
!! ATGAAGTGATGATAAAATTA+GGG - chr8.1:21717072-21717091 MS.gene62852:intron 20.0%
!! ATTGAAAATGATAAAAGTCT+CGG + chr8.1:21716859-21716878 None:intergenic 20.0%
!! GAAAGACTTAAATATTATTG+CGG - chr8.1:21714901-21714920 MS.gene62852:intron 20.0%
!!! AAATTTGAGTTGGAAAATAT+AGG - chr8.1:21714383-21714402 MS.gene62852:intron 20.0%
!!! ATTTACATTTTTTAGGTGAA+TGG - chr8.1:21716901-21716920 MS.gene62852:intron 20.0%
!!! CAATTGTCAATTTTCAAAAT+TGG - chr8.1:21715574-21715593 MS.gene62852:intron 20.0%
!!! GCATTTAGTTTCATATTAAA+TGG - chr8.1:21716589-21716608 MS.gene62852:intron 20.0%
!!! TTGAATGAACCTTTTTAATT+TGG - chr8.1:21717802-21717821 MS.gene62852:intron 20.0%
!!! TTTACATTTTTTAGGTGAAT+GGG - chr8.1:21716902-21716921 MS.gene62852:intron 20.0%
! AATGGTCATATATTAGTACA+TGG + chr8.1:21715679-21715698 None:intergenic 25.0%
! ACTAAAATCATTCCAATTCT+AGG - chr8.1:21714685-21714704 MS.gene62852:CDS 25.0%
! ACTTATGTTTATAGCTTATG+TGG - chr8.1:21714571-21714590 MS.gene62852:intron 25.0%
! AGAAAATGAAATAACCTTCA+TGG + chr8.1:21717258-21717277 None:intergenic 25.0%
! ATAAACAGAATAAAAGTGAG+AGG - chr8.1:21717102-21717121 MS.gene62852:intron 25.0%
! ATGGTCATATATTAGTACAT+GGG + chr8.1:21715678-21715697 None:intergenic 25.0%
! CATATGTAAAAGCAGAAATT+TGG + chr8.1:21716454-21716473 None:intergenic 25.0%
! CGTCATTCATTGAAAATTAT+AGG + chr8.1:21716235-21716254 None:intergenic 25.0%
! CTTACTTAGAATTATAGTGT+TGG + chr8.1:21715830-21715849 None:intergenic 25.0%
! TAAACAGAATAAAAGTGAGA+GGG - chr8.1:21717103-21717122 MS.gene62852:intron 25.0%
! TAAATGGGATACTAACTATT+TGG - chr8.1:21715132-21715151 MS.gene62852:intron 25.0%
! TAAGAGTTATCTTTCTCAAA+TGG + chr8.1:21717909-21717928 None:intergenic 25.0%
! TATAGAAGAGAACTTTCATT+TGG - chr8.1:21717418-21717437 MS.gene62852:intron 25.0%
! TCTATGCTGTCTTATATATT+AGG - chr8.1:21716672-21716691 MS.gene62852:intron 25.0%
! TCTTAGAATCTTATTCTCTT+AGG - chr8.1:21716741-21716760 MS.gene62852:intron 25.0%
! TTAGATAGTATCAATTAAGG+AGG + chr8.1:21715487-21715506 None:intergenic 25.0%
!! ACTCATTTGTTGAGAATTTA+TGG - chr8.1:21715929-21715948 MS.gene62852:intron 25.0%
!! TTTGAAATTCTGTCTTTATC+TGG - chr8.1:21717565-21717584 MS.gene62852:intron 25.0%
!!! AAGCTTCTAAATTTGCTAAT+TGG - chr8.1:21716414-21716433 MS.gene62852:intron 25.0%
!!! ACAAAGCTAAAGTTTTAAGT+TGG + chr8.1:21716481-21716500 None:intergenic 25.0%
!!! CTTAGTGCAATTTTGAAAAA+AGG + chr8.1:21715726-21715745 None:intergenic 25.0%
!!! TTATAAGGCGTCTATAATTT+TGG + chr8.1:21716828-21716847 None:intergenic 25.0%
!!! TTTTTAATTCCCCAAATAAC+AGG + chr8.1:21717023-21717042 None:intergenic 25.0%
AAAAAAGGAGTTGAGAAAAG+TGG + chr8.1:21715711-21715730 None:intergenic 30.0%
AAAACAACTCAATGAAGCTT+AGG + chr8.1:21715234-21715253 None:intergenic 30.0%
ACAAAATTGCTGACAATCAT+CGG + chr8.1:21717211-21717230 None:intergenic 30.0%
AGGTATTTATTCTATCCGTA+AGG - chr8.1:21717722-21717741 MS.gene62852:intron 30.0%
ATACGGTATGTTTGAATTGA+CGG + chr8.1:21714826-21714845 None:intergenic 30.0%
ATCATTATGCTTACACTTTG+CGG + chr8.1:21715158-21715177 None:intergenic 30.0%
ATTCAAACATACCGTATGTT+AGG - chr8.1:21714829-21714848 MS.gene62852:intron 30.0%
ATTTCAAACATGTATCTACC+AGG - chr8.1:21718112-21718131 MS.gene62852:CDS 30.0%
ATTTGCAAAATTCTCCCTTA+CGG + chr8.1:21717740-21717759 None:intergenic 30.0%
CTCAAAAGTGACTTAATGTT+TGG - chr8.1:21714661-21714680 MS.gene62852:CDS 30.0%
GAAAGTTCTCTTCTATAAGA+TGG + chr8.1:21717415-21717434 None:intergenic 30.0%
GAAGTTACTGATGATAGAAT+AGG + chr8.1:21718260-21718279 None:intergenic 30.0%
GAGGGTAAATATCTTATATC+AGG + chr8.1:21716628-21716647 None:intergenic 30.0%
GATGTATCTATACAATTCCA+CGG - chr8.1:21715547-21715566 MS.gene62852:intron 30.0%
GGTATTTATTCTATCCGTAA+GGG - chr8.1:21717723-21717742 MS.gene62852:intron 30.0%
GTAGATCATTAAATGCATTG+TGG + chr8.1:21717446-21717465 None:intergenic 30.0%
GTATCAATTAAAGAAGAGAG+AGG + chr8.1:21715516-21715535 None:intergenic 30.0%
TAGGCAATTGCAAATTTCTT+GGG + chr8.1:21715215-21715234 None:intergenic 30.0%
TAGTAAGAACTTACTGACAT+AGG + chr8.1:21715899-21715918 None:intergenic 30.0%
TATCTTATATCAGGTAGTCA+AGG + chr8.1:21716619-21716638 None:intergenic 30.0%
TATGCTGTAATCCTGTTATT+TGG - chr8.1:21717009-21717028 MS.gene62852:intron 30.0%
TCGAACATAATACCTAGAAT+TGG + chr8.1:21714700-21714719 None:intergenic 30.0%
TGAATCACGCCAAATTAAAA+AGG + chr8.1:21717814-21717833 None:intergenic 30.0%
TGGTTAACGTGAAATTGAAT+GGG + chr8.1:21715629-21715648 None:intergenic 30.0%
TTAGGCAATTGCAAATTTCT+TGG + chr8.1:21715216-21715235 None:intergenic 30.0%
TTATAGCAACATGAATAAGC+TGG - chr8.1:21718040-21718059 MS.gene62852:CDS 30.0%
TTGGTTAACGTGAAATTGAA+TGG + chr8.1:21715630-21715649 None:intergenic 30.0%
TTTGTGTGTATGGTTATGTT+AGG - chr8.1:21717226-21717245 MS.gene62852:intron 30.0%
! AAAAACTGTGTACTGAGTTT+TGG - chr8.1:21716089-21716108 MS.gene62852:intron 30.0%
! AAATTGACAATTGATAACCG+TGG + chr8.1:21715567-21715586 None:intergenic 30.0%
! AGTGTGAAATGTTACTGTTT+TGG - chr8.1:21714479-21714498 MS.gene62852:intron 30.0%
! AGTTAGTTGATACTGTTAAG+TGG - chr8.1:21715012-21715031 MS.gene62852:CDS 30.0%
! ATGCTGTAATCCTGTTATTT+GGG - chr8.1:21717010-21717029 MS.gene62852:intron 30.0%
! GGTAGATACATGTTTGAAAT+TGG + chr8.1:21718112-21718131 None:intergenic 30.0%
! TCAGTACACAGTTTTTAACA+TGG + chr8.1:21716085-21716104 None:intergenic 30.0%
! TGATATAAAGCATCTTGAGA+TGG - chr8.1:21716702-21716721 MS.gene62852:intron 30.0%
!! CATATTTCTAGCCTAACATA+CGG + chr8.1:21714843-21714862 None:intergenic 30.0%
!! GTTATTTCATTTTCTCAGCA+AGG - chr8.1:21717263-21717282 MS.gene62852:intron 30.0%
!!! ACTTCTTTTTCAGTGATAAC+TGG - chr8.1:21717173-21717192 MS.gene62852:intron 30.0%
!!! CAAACATTAAGTCACTTTTG+AGG + chr8.1:21714663-21714682 None:intergenic 30.0%
!!! GTTGTTTTTTGTGTATGAGA+TGG - chr8.1:21715246-21715265 MS.gene62852:intron 30.0%
AAATTTGAACCAACAGAGCA+AGG + chr8.1:21716930-21716949 None:intergenic 35.0%
AATTTGAACCAACAGAGCAA+GGG + chr8.1:21716929-21716948 None:intergenic 35.0%
ACATCATGCTTCTGATTTCT+TGG + chr8.1:21718182-21718201 None:intergenic 35.0%
ACCATGATGCTGATATAACT+CGG - chr8.1:21715394-21715413 MS.gene62852:intron 35.0%
ACTGATGATAGAATAGGTAC+TGG + chr8.1:21718254-21718273 None:intergenic 35.0%
ACTGCACTACAATTATCAAG+AGG - chr8.1:21715748-21715767 MS.gene62852:intron 35.0%
AGACACATTAATATCAGCAG+CGG + chr8.1:21718336-21718355 None:intergenic 35.0%
AGTTATATCAGCATCATGGT+CGG + chr8.1:21715394-21715413 None:intergenic 35.0%
ATCCCACTATATGCTCAAAA+AGG + chr8.1:21717495-21717514 None:intergenic 35.0%
ATGTTAGGATGTTACCATGA+AGG - chr8.1:21717241-21717260 MS.gene62852:intron 35.0%
GAGCAAAACGAAATTTGAGT+TGG - chr8.1:21714373-21714392 MS.gene62852:intron 35.0%
GATACAATACACATCCGATA+CGG + chr8.1:21716263-21716282 None:intergenic 35.0%
GATAGAATAAATACCTGCAC+TGG + chr8.1:21717718-21717737 None:intergenic 35.0%
GATAGTATCAATTAAGGAGG+AGG + chr8.1:21715484-21715503 None:intergenic 35.0%
GATATTAATGTGTCTCTTCC+TGG - chr8.1:21718341-21718360 MS.gene62852:CDS 35.0%
GCAACTGATGTTTAACACTT+TGG - chr8.1:21714862-21714881 MS.gene62852:intron 35.0%
GTATGCATTCTTTCAGCAAA+TGG - chr8.1:21717296-21717315 MS.gene62852:intron 35.0%
GTCAATTCATCTCATGTGTT+CGG - chr8.1:21715433-21715452 MS.gene62852:CDS 35.0%
GTGAAATTGAATGGGCAAAT+TGG + chr8.1:21715621-21715640 None:intergenic 35.0%
GTTTCTTGTCTGTGATTCAT+AGG - chr8.1:21716291-21716310 MS.gene62852:intron 35.0%
TAGTAGTAATCTCAGAAGCA+CGG - chr8.1:21715326-21715345 MS.gene62852:intron 35.0%
TATCAGCAAGTAAGCTGTAA+TGG + chr8.1:21715047-21715066 None:intergenic 35.0%
TCTAGCGAACAAACATTCAA+TGG - chr8.1:21718009-21718028 MS.gene62852:CDS 35.0%
TGTAAGCATAATGATGAAGC+TGG - chr8.1:21715163-21715182 MS.gene62852:intron 35.0%
TTGAATGGGCAAATTGGTAA+TGG + chr8.1:21715615-21715634 None:intergenic 35.0%
! AAGAAATCAGAAGCATGATG+TGG - chr8.1:21718181-21718200 MS.gene62852:CDS 35.0%
! AAGATGATAATGCTCCTCTT+TGG - chr8.1:21715872-21715891 MS.gene62852:intron 35.0%
! AGATGATAATGCTCCTCTTT+GGG - chr8.1:21715873-21715892 MS.gene62852:intron 35.0%
! AGCATTAACAGTGATGATGT+GGG + chr8.1:21716958-21716977 None:intergenic 35.0%
! TGAATGGGCAAATTGGTAAT+GGG + chr8.1:21715614-21715633 None:intergenic 35.0%
! TGCTGTAATCCTGTTATTTG+GGG - chr8.1:21717011-21717030 MS.gene62852:intron 35.0%
! TGTCAGCAATTTTGTGTGTA+TGG - chr8.1:21717216-21717235 MS.gene62852:intron 35.0%
! TTAATTTGGCGTGATTCAAG+TGG - chr8.1:21717816-21717835 MS.gene62852:intron 35.0%
! TTACAGCTTACTTGCTGATA+TGG - chr8.1:21715047-21715066 MS.gene62852:CDS 35.0%
!! CAAATTGGTAATGGGATCAT+TGG + chr8.1:21715606-21715625 None:intergenic 35.0%
!! TGCCTTTTTGAGCATATAGT+GGG - chr8.1:21717490-21717509 MS.gene62852:intron 35.0%
!! TTTTGAGCATATAGTGGGAT+TGG - chr8.1:21717495-21717514 MS.gene62852:intron 35.0%
!!! TTCTGACATTGTGTTGCTTT+TGG + chr8.1:21715794-21715813 None:intergenic 35.0%
AACATGTATCTACCAGGTAG+TGG - chr8.1:21718118-21718137 MS.gene62852:CDS 40.0%
AAGACCGAGAAAATATGCAG+CGG - chr8.1:21714235-21714254 MS.gene62852:intron 40.0%
AAGGAGTTGAGAAAAGTGGT+AGG + chr8.1:21715707-21715726 None:intergenic 40.0%
AGAGTAGACCACAACTATTG+AGG + chr8.1:21714623-21714642 None:intergenic 40.0%
AGTGAGTTCAGATTCAGATG+TGG - chr8.1:21714595-21714614 MS.gene62852:intron 40.0%
AGTGATCACACAGATATGAC+AGG + chr8.1:21717152-21717171 None:intergenic 40.0%
ATTAATGTGTCTCTTCCTGG+AGG - chr8.1:21718344-21718363 MS.gene62852:CDS 40.0%
CACATCATCACTGTTAATGC+TGG - chr8.1:21716957-21716976 MS.gene62852:intron 40.0%
CGCTGAGTTTGACTAAATCA+CGG - chr8.1:21714724-21714743 MS.gene62852:CDS 40.0%
GACACATTAATATCAGCAGC+GGG + chr8.1:21718335-21718354 None:intergenic 40.0%
GAGATGAATTGACTGTATCG+CGG + chr8.1:21715426-21715445 None:intergenic 40.0%
GTCTCGGCGTTTCAATTATA+AGG + chr8.1:21716843-21716862 None:intergenic 40.0%
GTGAGTTCAGATTCAGATGT+GGG - chr8.1:21714596-21714615 MS.gene62852:intron 40.0%
GTTTGAGTCTCTTAAGCATG+TGG - chr8.1:21717845-21717864 MS.gene62852:intron 40.0%
TAAAACTACCAACCACTACC+TGG + chr8.1:21718133-21718152 None:intergenic 40.0%
TCCGAGTTATATCAGCATCA+TGG + chr8.1:21715398-21715417 None:intergenic 40.0%
TCGTTCATGCCAAATGAAAG+TGG - chr8.1:21717589-21717608 MS.gene62852:intron 40.0%
TGACCACAAAAGACCAAAAG+AGG + chr8.1:21714965-21714984 None:intergenic 40.0%
TTCATGCCAAATGAAAGTGG+AGG - chr8.1:21717592-21717611 MS.gene62852:intron 40.0%
! CAGCATTAACAGTGATGATG+TGG + chr8.1:21716959-21716978 None:intergenic 40.0%
! GCATTAACAGTGATGATGTG+GGG + chr8.1:21716957-21716976 None:intergenic 40.0%
! GTTGACATCTGTTCCTCTTT+TGG - chr8.1:21714949-21714968 MS.gene62852:intron 40.0%
! TTTTGGATTGTGTTGTGCTG+TGG - chr8.1:21714496-21714515 MS.gene62852:intron 40.0%
!! ACTTATCTCGGTGTTTCTAC+AGG - chr8.1:21717537-21717556 MS.gene62852:intron 40.0%
!! ATAGGTACTGGATCAAGAGT+AGG + chr8.1:21718242-21718261 None:intergenic 40.0%
!! CTTATCTCGGTGTTTCTACA+GGG - chr8.1:21717538-21717557 MS.gene62852:intron 40.0%
!! GGTCTACTCTTGATAATGTG+AGG - chr8.1:21714633-21714652 MS.gene62852:intron 40.0%
!! GTGCCTTTTTGAGCATATAG+TGG - chr8.1:21717489-21717508 MS.gene62852:intron 40.0%
!! GTTCCTCTTTTGGTCTTTTG+TGG - chr8.1:21714959-21714978 MS.gene62852:intron 40.0%
!! TAGGTACTGGATCAAGAGTA+GGG + chr8.1:21718241-21718260 None:intergenic 40.0%
!!! GGTAGTGGTTGGTAGTTTTA+TGG - chr8.1:21718133-21718152 MS.gene62852:CDS 40.0%
AACAACAGCAGGAGATGACA+CGG + chr8.1:21718213-21718232 None:intergenic 45.0%
ACTGGATCAAGAGTAGGGAT+GGG + chr8.1:21718236-21718255 None:intergenic 45.0%
AGACCAATTATCTCCACGGA+AGG + chr8.1:21718282-21718301 None:intergenic 45.0%
ATACACTAAAGTGGCTTCCG+AGG - chr8.1:21715349-21715368 MS.gene62852:intron 45.0%
ATGCCAAATGAAAGTGGAGG+AGG - chr8.1:21717595-21717614 MS.gene62852:intron 45.0%
ATGTGGGACCTCAATAGTTG+TGG - chr8.1:21714612-21714631 MS.gene62852:intron 45.0%
CAGCAGACCAATTATCTCCA+CGG + chr8.1:21718286-21718305 None:intergenic 45.0%
CATCACTGTTAATGCTGGAG+AGG - chr8.1:21716962-21716981 MS.gene62852:intron 45.0%
CTGAGTTGCATGCAATCTAC+CGG - chr8.1:21715996-21716015 MS.gene62852:intron 45.0%
CTTCCTCTCTTCTTCTTCTC+TGG + chr8.1:21714218-21714237 None:intergenic 45.0%
CTTCCTTCCGTGGAGATAAT+TGG - chr8.1:21718276-21718295 MS.gene62852:CDS 45.0%
GAAAAGTGGTAGGAGGTCAA+TGG + chr8.1:21715697-21715716 None:intergenic 45.0%
GAAGCACGGATACACTAAAG+TGG - chr8.1:21715340-21715359 MS.gene62852:intron 45.0%
GAGTTGAGAAAAGTGGTAGG+AGG + chr8.1:21715704-21715723 None:intergenic 45.0%
GCACGCACAGTTACTTATCT+CGG - chr8.1:21717525-21717544 MS.gene62852:intron 45.0%
GGAGTTTGGTTGTCTGTTCT+TGG + chr8.1:21714086-21714105 None:intergenic 45.0%
GTCTCTTAAGCATGTGGTCA+TGG - chr8.1:21717851-21717870 MS.gene62852:intron 45.0%
GTTCCTCCTCCACTTTCATT+TGG + chr8.1:21717601-21717620 None:intergenic 45.0%
TAAAAGCTGAACCGCTGATC+CGG + chr8.1:21714114-21714133 None:intergenic 45.0%
TACTGGATCAAGAGTAGGGA+TGG + chr8.1:21718237-21718256 None:intergenic 45.0%
TCATCAGTAACTTCCTTCCG+TGG - chr8.1:21718266-21718285 MS.gene62852:CDS 45.0%
TGAATGACGAATCGCCGTAT+CGG - chr8.1:21716246-21716265 MS.gene62852:intron 45.0%
TTACTGACATAGGCCCAAAG+AGG + chr8.1:21715889-21715908 None:intergenic 45.0%
TTATCCTTTGCATCCGATGC+TGG + chr8.1:21718311-21718330 None:intergenic 45.0%
TTCTTGGCTTCTGCTCATGT+TGG + chr8.1:21718166-21718185 None:intergenic 45.0%
TTTGGCGTGATTCAAGTGGT+CGG - chr8.1:21717820-21717839 MS.gene62852:intron 45.0%
! ATCAGCGGTTCAGCTTTTAG+CGG - chr8.1:21714115-21714134 MS.gene62852:CDS 45.0%
! CCATCCGCTGCATATTTTCT+CGG + chr8.1:21714242-21714261 None:intergenic 45.0%
! GTTTTGCTCACAGAGCTAAC+TGG + chr8.1:21714362-21714381 None:intergenic 45.0%
! TGTATCTACCAGGTAGTGGT+TGG - chr8.1:21718122-21718141 MS.gene62852:CDS 45.0%
!!! GTGGTTGGTAGTTTTATGGC+AGG - chr8.1:21718137-21718156 MS.gene62852:CDS 45.0%
!! AAAAAAAAAAAAAAAAACTA+TGG + chr8.1:21714755-21714774 None:intergenic 5.0%
!! ATGATTAAATTAAATTAAAT+GGG - chr8.1:21715117-21715136 MS.gene62852:intron 5.0%
!! TATGATTAAATTAAATTAAA+TGG - chr8.1:21715116-21715135 MS.gene62852:intron 5.0%
!!! ATTTAATTTAATTTAATCAT+AGG + chr8.1:21715117-21715136 None:intergenic 5.0%
AAATCAATCACCGGCGGCAA+CGG + chr8.1:21714311-21714330 None:intergenic 50.0%
AACGGAGCAGACGACGATAT+CGG + chr8.1:21714293-21714312 None:intergenic 50.0%
AATGTGCCCCCAGAAGAATC+GGG + chr8.1:21717350-21717369 None:intergenic 50.0%
AGTGCAGCAGCAATCTGAGA+GGG + chr8.1:21716646-21716665 None:intergenic 50.0%
ATCTCCTCCTTCACCAACAC+CGG + chr8.1:21716018-21716037 None:intergenic 50.0%
CAATGTGCCCCCAGAAGAAT+CGG + chr8.1:21717351-21717370 None:intergenic 50.0%
CCGAGAAAATATGCAGCGGA+TGG - chr8.1:21714239-21714258 MS.gene62852:intron 50.0%
GAAAGAATGCATACCGCTCG+AGG + chr8.1:21717290-21717309 None:intergenic 50.0%
GCATCATGGTCGGCACATAT+CGG + chr8.1:21715384-21715403 None:intergenic 50.0%
GGGCAGTGTATTGTGTCAAG+AGG - chr8.1:21714922-21714941 MS.gene62852:intron 50.0%
GTGCCAGAGAAGAAGAAGAG+AGG - chr8.1:21714212-21714231 MS.gene62852:CDS 50.0%
GTGTCTTTGGCAAGTCCTGA+TGG - chr8.1:21717646-21717665 MS.gene62852:intron 50.0%
GTGTTGTGCTGTGGTGTGTT+TGG - chr8.1:21714505-21714524 MS.gene62852:intron 50.0%
TCCGCCGTGAAATCAATCAC+CGG + chr8.1:21714320-21714339 None:intergenic 50.0%
TGCATGCAATCTACCGGTGT+TGG - chr8.1:21716002-21716021 MS.gene62852:intron 50.0%
TTCGTCAGCCCGATTCTTCT+GGG - chr8.1:21717339-21717358 MS.gene62852:intron 50.0%
! AGTCCTGATGGACGTGTTGT+TGG - chr8.1:21717658-21717677 MS.gene62852:intron 50.0%
! TGGGGGCACATTGACATATG+AGG - chr8.1:21717358-21717377 MS.gene62852:intron 50.0%
! TGGTGTTAGTGGTGGCGTTA+CGG - chr8.1:21714022-21714041 MS.gene62852:CDS 50.0%
!! AGGAGTAGCTGGTTTGTTGG+TGG - chr8.1:21717684-21717703 MS.gene62852:intron 50.0%
!! CAATCTACCGGTGTTGGTGA+AGG - chr8.1:21716008-21716027 MS.gene62852:intron 50.0%
AAGTGGCTTCCGAGGCGTAT+CGG - chr8.1:21715357-21715376 MS.gene62852:intron 55.0%
AGCGGATGGTTCAGTGACAG+CGG - chr8.1:21714253-21714272 MS.gene62852:intron 55.0%
AGGCGGCATGAGTGTGTCTT+TGG - chr8.1:21717633-21717652 MS.gene62852:intron 55.0%
CAGTGCAGCAGCAATCTGAG+AGG + chr8.1:21716647-21716666 None:intergenic 55.0%
CTTCGTCAGCCCGATTCTTC+TGG - chr8.1:21717338-21717357 MS.gene62852:intron 55.0%
GAATGGGTCCCTTGCTCTGT+TGG - chr8.1:21716918-21716937 MS.gene62852:intron 55.0%
GACAACCAAACTCCGACCAC+CGG - chr8.1:21714092-21714111 MS.gene62852:CDS 55.0%
GCCGTGAAATCAATCACCGG+CGG + chr8.1:21714317-21714336 None:intergenic 55.0%
GGAACACGAAGCAGATCAGG+CGG - chr8.1:21717616-21717635 MS.gene62852:intron 55.0%
GGAGGAACACGAAGCAGATC+AGG - chr8.1:21717613-21717632 MS.gene62852:intron 55.0%
GTAGGGATGGGAACAACAGC+AGG + chr8.1:21718224-21718243 None:intergenic 55.0%
TCCGCTACAACCGCCGTATA+CGG - chr8.1:21714157-21714176 MS.gene62852:CDS 55.0%
TCGTCAGCCCGATTCTTCTG+GGG - chr8.1:21717340-21717359 MS.gene62852:intron 55.0%
TGTCTGTTCTTGGAGCCACG+TGG + chr8.1:21714076-21714095 None:intergenic 55.0%
TTCTCAGCAAGGACCTCGAG+CGG - chr8.1:21717274-21717293 MS.gene62852:intron 55.0%
TTGGTCTGCTGTGCCAGCAT+CGG - chr8.1:21718295-21718314 MS.gene62852:CDS 55.0%
! AGCGGTTCAGCTTTTAGCGG+CGG - chr8.1:21714118-21714137 MS.gene62852:CDS 55.0%
! CCTGATGGACGTGTTGTTGG+CGG - chr8.1:21717661-21717680 MS.gene62852:intron 55.0%
! CTTTTAGCGGCGGTTCAAGC+AGG - chr8.1:21714128-21714147 MS.gene62852:CDS 55.0%
! GAGGCTAGTGGTGGTGTTAG+TGG - chr8.1:21714011-21714030 MS.gene62852:CDS 55.0%
! GCCGCCGGTGATTGATTTCA+CGG - chr8.1:21714313-21714332 MS.gene62852:intron 55.0%
! GCCGGTGATTGATTTCACGG+CGG - chr8.1:21714316-21714335 MS.gene62852:intron 55.0%
! GCTAGTGGTGGTGTTAGTGG+TGG - chr8.1:21714014-21714033 MS.gene62852:CDS 55.0%
! TGTGCCAGCATCGGATGCAA+AGG - chr8.1:21718304-21718323 MS.gene62852:CDS 55.0%
! TGTTAGTGGTGGCGTTACGG+TGG - chr8.1:21714025-21714044 MS.gene62852:CDS 55.0%
!! CGGAGGAGTAGCTGGTTTGT+TGG - chr8.1:21717681-21717700 MS.gene62852:intron 55.0%
!! GCAGACGACGATATCGGCTT+CGG + chr8.1:21714287-21714306 None:intergenic 55.0%
!! TCTACCGGTGTTGGTGAAGG+AGG - chr8.1:21716011-21716030 MS.gene62852:intron 55.0%
AACTCCGACCACCGGATCAG+CGG - chr8.1:21714100-21714119 MS.gene62852:CDS 60.0%
AAGCTGAACCGCTGATCCGG+TGG + chr8.1:21714111-21714130 None:intergenic 60.0%
AGTGGCTTCCGAGGCGTATC+GGG - chr8.1:21715358-21715377 MS.gene62852:intron 60.0%
CATATCGGCCCGATACGCCT+CGG + chr8.1:21715369-21715388 None:intergenic 60.0%
CCGCCAACAACACGTCCATC+AGG + chr8.1:21717664-21717683 None:intergenic 60.0%
CGTCAGCCCGATTCTTCTGG+GGG - chr8.1:21717341-21717360 MS.gene62852:intron 60.0%
CTGATCCGGTGGTCGGAGTT+TGG + chr8.1:21714100-21714119 None:intergenic 60.0%
GCCGTATACGGCGGTGGTAA+CGG - chr8.1:21714169-21714188 MS.gene62852:CDS 60.0%
GCCGTATACGGCGGTTGTAG+CGG + chr8.1:21714161-21714180 None:intergenic 60.0%
GCCGTTACCACCGCCGTATA+CGG + chr8.1:21714173-21714192 None:intergenic 60.0%
GCTACAACCGCCGTATACGG+CGG - chr8.1:21714160-21714179 MS.gene62852:CDS 60.0%
GGCGTGATTCAAGTGGTCGG+TGG - chr8.1:21717823-21717842 MS.gene62852:intron 60.0%
GGTCGGATCAGATGCTCCGT+CGG - chr8.1:21714046-21714065 MS.gene62852:CDS 60.0%
GTATACGGCGGTTGTAGCGG+AGG + chr8.1:21714158-21714177 None:intergenic 60.0%
GTTACCACCGCCGTATACGG+CGG + chr8.1:21714170-21714189 None:intergenic 60.0%
GTTGTTGGCGGAGGAGTAGC+TGG - chr8.1:21717673-21717692 MS.gene62852:intron 60.0%
TCTGGCACCGTCGTAACTGC+CGG + chr8.1:21714200-21714219 None:intergenic 60.0%
TGAACCGCTGATCCGGTGGT+CGG + chr8.1:21714107-21714126 None:intergenic 60.0%
! AGTGGTGGCGTTACGGTGGT+CGG - chr8.1:21714029-21714048 MS.gene62852:CDS 60.0%
! GATGGACGTGTTGTTGGCGG+AGG - chr8.1:21717664-21717683 MS.gene62852:intron 60.0%
ACAACCGCCGTATACGGCGG+TGG - chr8.1:21714163-21714182 MS.gene62852:CDS 65.0%
GGAGCCACGTGGTACTCCGA+CGG + chr8.1:21714065-21714084 None:intergenic 65.0%
GGCGTCTCCGGCAGTTACGA+CGG - chr8.1:21714190-21714209 MS.gene62852:CDS 65.0%
GGTGGCTGCAAGTCCAGTGC+AGG - chr8.1:21717702-21717721 MS.gene62852:intron 65.0%
! TGCTCCGTCGGAGTACCACG+TGG - chr8.1:21714058-21714077 MS.gene62852:CDS 65.0%
GTCGTCTGCTCCGTTGCCGC+CGG - chr8.1:21714298-21714317 MS.gene62852:intron 70.0%
!! GGCGGTGGTAACGGCGTCTC+CGG - chr8.1:21714178-21714197 MS.gene62852:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 21714008 21718370 21714008 ID=MS.gene62852
chr8.1 mRNA 21714008 21718370 21714008 ID=MS.gene62852.t1;Parent=MS.gene62852
chr8.1 exon 21717974 21718370 21717974 ID=MS.gene62852.t1.exon1;Parent=MS.gene62852.t1
chr8.1 CDS 21717974 21718370 21717974 ID=cds.MS.gene62852.t1;Parent=MS.gene62852.t1
chr8.1 exon 21715395 21715462 21715395 ID=MS.gene62852.t1.exon2;Parent=MS.gene62852.t1
chr8.1 CDS 21715395 21715462 21715395 ID=cds.MS.gene62852.t1;Parent=MS.gene62852.t1
chr8.1 exon 21714999 21715130 21714999 ID=MS.gene62852.t1.exon3;Parent=MS.gene62852.t1
chr8.1 CDS 21714999 21715130 21714999 ID=cds.MS.gene62852.t1;Parent=MS.gene62852.t1
chr8.1 exon 21714655 21714819 21714655 ID=MS.gene62852.t1.exon4;Parent=MS.gene62852.t1
chr8.1 CDS 21714655 21714819 21714655 ID=cds.MS.gene62852.t1;Parent=MS.gene62852.t1
chr8.1 exon 21714008 21714244 21714008 ID=MS.gene62852.t1.exon5;Parent=MS.gene62852.t1
chr8.1 CDS 21714008 21714244 21714008 ID=cds.MS.gene62852.t1;Parent=MS.gene62852.t1
Gene Sequence

>MS.gene62852

ATGGAGGCTAGTGGTGGTGTTAGTGGTGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTACCACGTGGCTCCAAGAACAGACAACCAAACTCCGACCACCGGATCAGCGGTTCAGCTTTTAGCGGCGGTTCAAGCAGGTGCTCCTCCGCTACAACCGCCGTATACGGCGGTGGTAACGGCGTCTCCGGCAGTTACGACGGTGCCAGAGAAGAAGAAGAGAGGAAGACCGAGAAAATATGCAGCGGATGGTTCAGTGACAGCGGCGCTGTCTCCGAAGCCGATATCGTCGTCTGCTCCGTTGCCGCCGGTGATTGATTTCACGGCGGAGAAGCGTGCAAAAGTAAAGCCAGTTAGCTCTGTGAGCAAAACGAAATTTGAGTTGGAAAATATAGGTACTGCTTCTAACTAGAAACTAGAATCTCTCTCTTTTTTTTGTCTACTTTTTAGTTTATTTTTGAAAAAATTCAGTGTGAAATGTTACTGTTTTGGATTGTGTTGTGCTGTGGTGTGTTTGGTTCTCTGTTGTTTGTGTAGTTAGAAATTTGTAATCAGTGTTTGACTTATGTTTATAGCTTATGTGGAAGTGAGTTCAGATTCAGATGTGGGACCTCAATAGTTGTGGTCTACTCTTGATAATGTGAGGTAGTCCTCAAAAGTGACTTAATGTTTGGAACTAAAATCATTCCAATTCTAGGTATTATGTTCGAATGACGCTGAGTTTGACTAAATCACGGTGTCACCATAGTTTTTTTTTTTTTTTTTGTAAAAAAAAATTACAGTGACATACTTATTATAATTATGCGAAATTCACCGTCAATTCAAACATACCGTATGTTAGGCTAGAAATATGCAACTGATGTTTAACACTTTGGATTGAGTTGTTGAATTGAAAGACTTAAATATTATTGCGGGCAGTGTATTGTGTCAAGAGGTCAAGTTGACATCTGTTCCTCTTTTGGTCTTTTGTGGTCAACTCTATTTACTACTATTATTAGTAATAGTTAGTTGATACTGTTAAGTGGTTCTTCATTCCATTACAGCTTACTTGCTGATATGGACTGTTATGAACTTATGATACTCATACGTGCAAATAAATCTTGTCCTATGATTAAATTAAATTAAATGGGATACTAACTATTTGGCCGCAAAGTGTAAGCATAATGATGAAGCTGGAAGTCAACTTTTCAGCTTAAAAATAGCCCAAGAAATTTGCAATTGCCTAAGCTTCATTGAGTTGTTTTTTGTGTATGAGATGGTAATAATATTCAATGTGTATTGAATATGCATAGTTCTACAAACTAGTTTTCATATTGTAGTAGTAATCTCAGAAGCACGGATACACTAAAGTGGCTTCCGAGGCGTATCGGGCCGATATGTGCCGACCATGATGCTGATATAACTCGGAAAATACCGCGATACAGTCAATTCATCTCATGTGTTCGGTTTTCTAGTACATGAATTAAACTTTCCTCCTCCTTAATTGATACTATCTAATTACATCCTCTCTCTTCTTTAATTGATACATGTAAATTGTGATGTATCTATACAATTCCACGGTTATCAATTGTCAATTTTCAAAATTGGTTTTTTCCAATGATCCCATTACCAATTTGCCCATTCAATTTCACGTTAACCAAATTCAATTTTCAATATTCTGATGCACCCATGTACTAATATATGACCATTGACCTCCTACCACTTTTCTCAACTCCTTTTTTCAAAATTGCACTAAGACACTGCACTACAATTATCAAGAGGAGACAGAGAGACATCTAGAACCAAAAGCAACACAATGTCAGAAGCAACTTCAAATTCCAACACTATAATTCTAAGTAAGTTTCTTTATGAAAATGTTTTACAAGATGATAATGCTCCTCTTTGGGCCTATGTCAGTAAGTTCTTACTATAAAGTAAAAACTCATTTGTTGAGAATTTATGGAACTGAAACTTCTGTGTGTCTTAATGTAAATGATGAGTATTTGTCTGAGTTGCATGCAATCTACCGGTGTTGGTGAAGGAGGAGATGAAATTAATACTATTTCAATATCTTAGTTTGGATTTTTCGAAGACCATGTTAAAAACTGTGTACTGAGTTTTGGAAGATAATGATTTGCAATTTCTATTTTATATTTTACTAATGGTTAAGAGCTATGTTTTTAATTTAATTTTCTTAAGTTGAAATATTATATTTATTAGTATATTTTATATATGTATCGTATCCTATAATTTTCAATGAATGACGAATCGCCGTATCGGATGTGTATTGTATCTGATACTCGTTTCTTGTCTGTGATTCATAGGTAGTATTGTTATTTTGAATCTATAATTTCTTTTTTTCCATACATTGTTTTGAGTTAATTCAAATATGATCTTCCCTTTTTGTTTAACTTTTAATTCTCGTAAGCTTCTAAATTTGCTAATTGGATGAAGCTTATTTCCCAAATTTCTGCTTTTACATATGTGCACCAACTTAAAACTTTAGCTTTGTAATTCTCTAAAAATTTGGTTGATGTCTGAGTCTGACATATATGATATGATGTAGAATTTTGAAACACTTATTTACAAATAATAAAATAGCATTTAGTTTCATATTAAATGGTTTTCCTTGACTACCTGATATAAGATATTTACCCTCTCAGATTGCTGCTGCACTGTACATTCTATGCTGTCTTATATATTAGGACTAAAATGATATAAAGCATCTTGAGATGGACTTAAAAGATTATTCTCTTAGAATCTTATTCTCTTAGGACAAAAGCATAGTGATGTTTCAACTTTTTATTAGATCTAAATATTCAAATTCTTAATTTGGCCAAAATTATAGACGCCTTATAATTGAAACGCCGAGACTTTTATCATTTTCAATTTGATTATTAATTATTGTTAACATTTACATTTTTTAGGTGAATGGGTCCCTTGCTCTGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGTAATTTTCAGAAATATCTATTGACTATGCTGTAATCCTGTTATTTGGGGAATTAAAAAGTCTTATTTACATGCATGTTTTTTGTAGAATGAAGTGATGATAAAATTAGGGACTAATTATAAACAGAATAAAAGTGAGAGGGAGCATTTAGTAACATGTTAATTTCCTGTCATATCTGTGTGATCACTTACTTCTTTTTCAGTGATAACTGGAAAATAGTCTAACCGATGATTGTCAGCAATTTTGTGTGTATGGTTATGTTAGGATGTTACCATGAAGGTTATTTCATTTTCTCAGCAAGGACCTCGAGCGGTATGCATTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGTGAAGCATTTGTGCAAATTTTTATTATCATTCCATCTTATAGAAGAGAACTTTCATTTGGTTCCACAATGCATTTAATGATCTACACAGTTCAAGAATGTTGTTTCTCGTGCCTTTTTGAGCATATAGTGGGATTGGATTATTTGCACGCACAGTTACTTATCTCGGTGTTTCTACAGGGACTGTTTGAAATTCTGTCTTTATCTGGTTCGTTCATGCCAAATGAAAGTGGAGGAGGAACACGAAGCAGATCAGGCGGCATGAGTGTGTCTTTGGCAAGTCCTGATGGACGTGTTGTTGGCGGAGGAGTAGCTGGTTTGTTGGTGGCTGCAAGTCCAGTGCAGGTATTTATTCTATCCGTAAGGGAGAATTTTGCAAATTAAAAGTGAAATAATAAATAAAAACAAAAACATTATTTCAAATTGAATGAACCTTTTTAATTTGGCGTGATTCAAGTGGTCGGTGGTTTGAGTCTCTTAAGCATGTGGTCATGGTTCAATCTCTAACTCATTTGTATTAAAATTCACCATTTGAGAAAGATAACTCTTAACTGCGCTTCGAATTTTCGAATAAATTAGATGCAGTTGCACGCATTTCTAGAAAACAAACCTTACAATGACAACTCCATTTCTAGCGAACAAACATTCAATGGCAACTCAATTATAGCAACATGAATAAGCTGGTGATTTAGTATTTACTCGATAACAAGTTTGTTTGATTCTGATCATTCCAATTTCAAACATGTATCTACCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCCAAGAAATCAGAAGCATGATGTGGTATCAACCGTGTCATCTCCTGCTGTTGTTCCCATCCCTACTCTTGATCCAGTACCTATTCTATCATCAGTAACTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCCAGCATCGGATGCAAAGGATAAGCCCGCTGCTGATATTAATGTGTCTCTTCCTGGAGGCTAA
Protein sequence

>MS.gene62852.t1

MEASGGVSGGVTVVGSDAPSEYHVAPRTDNQTPTTGSAVQLLAAVQAGAPPLQPPYTAVVTASPAVTTVPEKKKRGRPRKYAADGSVTAALSPKPISSSAPLPPVIDFTAEKRAKVKPVSSVSKTKFELENIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKPRNQKHDVVSTVSSPAVVPIPTLDPVPILSSVTSFRGDNWSAVPASDAKDKPAADINVSLPGG