AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62917

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62917.t1 MTR_7g018240 93.471 628 41 0 1 628 1 628 0.0 1208
MS.gene62917.t1 MTR_4g104830 30.420 595 396 5 33 623 50 630 6.96e-93 300
MS.gene62917.t1 MTR_4g104790 33.210 542 353 5 87 622 90 628 2.00e-91 295
MS.gene62917.t1 MTR_4g104800 30.970 536 363 4 87 617 95 628 6.13e-88 286
MS.gene62917.t1 MTR_7g018270 40.208 480 184 14 1 475 1 382 2.10e-80 259
MS.gene62917.t1 MTR_5g092040 28.070 456 249 11 167 602 104 500 5.17e-43 162
MS.gene62917.t1 MTR_4g104860 33.333 198 132 0 229 426 1 198 1.67e-32 125
MS.gene62917.t1 MTR_0252s0060 25.823 395 220 7 219 561 42 415 3.19e-30 124
MS.gene62917.t1 MTR_1g055295 21.090 422 324 7 186 602 623 1040 9.83e-22 100
MS.gene62917.t1 MTR_5g095130 23.059 425 307 9 189 607 67 477 3.96e-21 99.0
MS.gene62917.t1 MTR_5g095130 20.171 585 372 16 76 575 86 660 1.86e-11 67.8
MS.gene62917.t1 MTR_4g068360 24.552 391 235 9 238 581 235 612 9.70e-19 90.5
MS.gene62917.t1 MTR_4g108650 24.859 354 254 7 237 584 268 615 1.00e-18 90.9
MS.gene62917.t1 MTR_3g115270 22.062 485 322 15 121 590 172 615 2.02e-18 89.7
MS.gene62917.t1 MTR_1g108270 20.909 440 307 8 195 596 62 498 2.09e-18 89.4
MS.gene62917.t1 MTR_3g100600 22.400 375 240 8 235 599 109 442 5.10e-18 88.2
MS.gene62917.t1 MTR_3g088505 24.093 386 264 15 218 590 59 428 1.93e-17 85.9
MS.gene62917.t1 MTR_3g088505 22.926 458 285 10 87 528 61 466 4.31e-14 75.5
MS.gene62917.t1 MTR_7g103600 23.585 424 250 12 238 593 137 554 3.59e-17 85.9
MS.gene62917.t1 MTR_2g437460 21.103 417 303 9 196 596 77 483 2.97e-16 83.2
MS.gene62917.t1 MTR_8g105170 22.280 386 282 10 242 618 334 710 4.60e-16 82.8
MS.gene62917.t1 MTR_8g071300 23.284 408 296 10 198 596 89 488 5.15e-16 82.0
MS.gene62917.t1 MTR_1g080110 23.588 301 224 4 238 538 130 424 5.22e-15 79.0
MS.gene62917.t1 MTR_1g080110 22.191 356 228 10 287 598 73 423 2.92e-13 73.2
MS.gene62917.t1 MTR_1g080110 20.433 416 317 7 125 531 148 558 5.97e-13 72.4
MS.gene62917.t1 MTR_7g007400 27.354 223 157 3 376 594 158 379 5.69e-15 79.0
MS.gene62917.t1 MTR_7g007400 28.025 157 109 2 408 561 225 380 2.09e-11 67.4
MS.gene62917.t1 MTR_1g068960 23.333 360 266 8 242 596 118 472 6.67e-15 78.6
MS.gene62917.t1 MTR_1g095880 21.017 590 392 24 15 556 122 685 9.73e-15 78.2
MS.gene62917.t1 MTR_2g018550 23.370 368 271 8 239 603 392 751 1.25e-14 77.8
MS.gene62917.t1 MTR_7g405940 26.906 223 158 3 376 594 176 397 1.31e-14 77.8
MS.gene62917.t1 MTR_7g405940 28.025 157 109 2 408 561 243 398 2.70e-11 67.0
MS.gene62917.t1 MTR_3g105900 23.782 349 243 7 266 604 353 688 5.86e-14 75.9
MS.gene62917.t1 MTR_3g105900 23.035 369 226 9 232 582 807 1135 3.61e-12 70.1
MS.gene62917.t1 MTR_1g484840 21.951 410 276 8 180 586 19 387 2.90e-13 73.6
MS.gene62917.t1 MTR_2g102210 22.430 428 305 14 181 594 50 464 3.17e-13 73.2
MS.gene62917.t1 MTR_0308s0020 21.644 365 275 7 235 594 174 532 3.95e-13 72.8
MS.gene62917.t1 MTR_8g054410 20.958 501 358 11 59 535 71 557 4.25e-13 72.8
MS.gene62917.t1 MTR_8g102710 20.812 394 256 10 208 590 59 407 5.45e-13 72.0
MS.gene62917.t1 MTR_6g079250 21.253 367 274 8 235 594 22 380 5.93e-13 71.2
MS.gene62917.t1 MTR_6g079250 23.301 206 142 5 408 603 17 216 3.37e-11 65.9
MS.gene62917.t1 MTR_7g011500 21.988 332 223 7 207 538 424 719 1.71e-12 70.9
MS.gene62917.t1 MTR_0014s0180 25.389 193 130 6 408 592 281 467 1.88e-12 70.5
MS.gene62917.t1 MTR_6g077800 23.413 252 183 6 345 592 143 388 2.30e-12 70.1
MS.gene62917.t1 MTR_7g044790 20.642 436 287 17 195 596 61 471 2.55e-12 70.5
MS.gene62917.t1 MTR_4g021220 23.247 271 197 7 331 593 71 338 2.67e-12 69.7
MS.gene62917.t1 MTR_2g069680 23.828 256 189 4 339 590 79 332 4.60e-12 69.3
MS.gene62917.t1 MTR_6g079210 20.856 374 267 12 235 594 22 380 4.75e-12 68.6
MS.gene62917.t1 MTR_7g012890 20.170 352 271 6 248 594 191 537 7.33e-12 68.6
MS.gene62917.t1 MTR_6g445320 23.077 364 242 9 235 566 177 534 1.01e-11 68.2
MS.gene62917.t1 MTR_0573s0020 26.087 184 129 5 414 593 8 188 1.11e-11 66.2
MS.gene62917.t1 MTR_2g035450 23.885 314 224 10 291 594 100 408 1.78e-11 67.8
MS.gene62917.t1 MTR_6g079380 24.324 185 134 4 412 592 281 463 1.87e-11 67.4
MS.gene62917.t1 MTR_7g076550 24.206 252 175 7 294 538 72 314 2.08e-11 67.0
MS.gene62917.t1 MTR_5g090170 24.235 392 263 14 214 590 54 426 2.23e-11 67.4
MS.gene62917.t1 MTR_5g031740 21.463 410 270 11 243 611 248 646 2.42e-11 67.4
MS.gene62917.t1 MTR_8g107050 20.293 478 337 10 125 577 127 585 2.66e-11 67.0
MS.gene62917.t1 MTR_3g061000 25.824 182 128 5 414 591 296 474 2.68e-11 66.6
MS.gene62917.t1 MTR_5g090170 24.235 392 263 14 214 590 54 426 3.42e-11 66.6
MS.gene62917.t1 MTR_8g107050 20.293 478 337 10 125 577 127 585 4.25e-11 66.6
MS.gene62917.t1 MTR_4g094688 22.911 371 252 12 258 613 219 570 4.35e-11 66.6
MS.gene62917.t1 MTR_7g451470 20.787 356 266 8 239 584 332 681 4.60e-11 66.6
MS.gene62917.t1 MTR_1g011520 23.421 380 239 13 221 586 103 444 5.34e-11 65.9
MS.gene62917.t1 MTR_6g079180 21.212 363 257 12 235 583 22 369 5.62e-11 65.1
MS.gene62917.t1 MTR_2g060630 20.470 298 209 7 201 492 76 351 5.85e-11 65.5
MS.gene62917.t1 MTR_1g031720 20.760 342 228 5 258 595 244 546 6.97e-11 65.9
MS.gene62917.t1 MTR_6g079830 21.994 341 242 9 237 566 242 569 7.80e-11 65.5
MS.gene62917.t1 MTR_2g049740 24.400 250 176 7 349 590 282 526 9.66e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62917.t1 AT5G15980 46.201 658 312 6 3 620 4 659 0.0 578
MS.gene62917.t1 AT3G02490 47.248 654 309 9 1 620 1 652 0.0 577
MS.gene62917.t1 AT3G48250 30.885 599 392 6 20 611 34 617 6.10e-86 281
MS.gene62917.t1 AT3G06920 21.975 405 304 7 191 590 48 445 2.49e-19 93.2
MS.gene62917.t1 AT3G06920 20.626 543 385 15 92 617 82 595 4.40e-12 69.7
MS.gene62917.t1 AT3G06920 21.975 405 304 7 191 590 48 445 2.49e-19 93.2
MS.gene62917.t1 AT3G06920 20.626 543 385 15 92 617 82 595 4.40e-12 69.7
MS.gene62917.t1 AT3G06920 21.975 405 304 7 191 590 34 431 2.61e-19 93.2
MS.gene62917.t1 AT3G06920 20.626 543 385 15 92 617 68 581 5.42e-12 69.7
MS.gene62917.t1 AT5G01110 21.861 462 305 9 125 538 300 753 6.85e-19 91.7
MS.gene62917.t1 AT5G01110 20.248 484 342 12 121 596 226 673 4.96e-11 66.2
MS.gene62917.t1 AT5G01110 21.861 462 305 9 125 538 272 725 7.59e-19 91.3
MS.gene62917.t1 AT5G01110 20.248 484 342 12 121 596 198 645 3.95e-11 66.6
MS.gene62917.t1 AT5G42310 23.299 485 320 16 119 590 193 638 8.87e-19 91.3
MS.gene62917.t1 AT1G05670 22.293 471 295 11 125 591 283 686 2.17e-17 86.7
MS.gene62917.t1 AT1G05670 22.293 471 295 11 125 591 283 686 2.17e-17 86.7
MS.gene62917.t1 AT1G05670 22.293 471 295 11 125 591 283 686 2.17e-17 86.7
MS.gene62917.t1 AT2G37230 23.951 405 257 13 180 575 72 434 5.45e-17 85.5
MS.gene62917.t1 AT1G71060 22.374 438 296 10 196 596 69 499 9.05e-17 84.0
MS.gene62917.t1 AT5G65560 23.342 377 274 9 227 596 329 697 4.71e-16 82.8
MS.gene62917.t1 AT5G65560 24.631 406 219 9 229 596 96 452 6.00e-16 82.4
MS.gene62917.t1 AT5G65560 23.342 377 274 9 227 596 329 697 4.71e-16 82.8
MS.gene62917.t1 AT5G65560 24.631 406 219 9 229 596 96 452 6.00e-16 82.4
MS.gene62917.t1 AT5G65560 23.342 377 274 9 227 596 329 697 4.71e-16 82.8
MS.gene62917.t1 AT5G65560 24.631 406 219 9 229 596 96 452 6.00e-16 82.4
MS.gene62917.t1 AT3G48810 21.662 397 260 9 239 594 59 445 2.19e-15 80.1
MS.gene62917.t1 AT1G79540 20.468 342 265 5 259 596 95 433 3.58e-15 79.7
MS.gene62917.t1 AT5G43820 23.587 407 263 11 209 574 104 503 4.80e-15 79.0
MS.gene62917.t1 AT5G64320 20.543 516 373 12 102 596 90 589 5.79e-15 79.0
MS.gene62917.t1 AT5G64320 24.731 279 199 4 324 598 215 486 6.49e-14 75.5
MS.gene62917.t1 AT5G64320 22.419 339 245 6 255 584 388 717 2.06e-12 70.9
MS.gene62917.t1 AT5G06400 22.196 419 307 8 193 601 615 1024 6.10e-15 79.3
MS.gene62917.t1 AT3G53700 23.622 381 270 10 219 587 45 416 6.64e-14 75.5
MS.gene62917.t1 AT3G53700 22.443 352 244 12 258 594 261 598 2.54e-12 70.5
MS.gene62917.t1 AT3G04760 22.967 418 273 12 217 594 123 531 7.24e-14 75.1
MS.gene62917.t1 AT3G04760 25.397 189 135 4 412 596 242 428 7.76e-14 75.1
MS.gene62917.t1 AT3G04760 25.397 189 135 4 412 596 212 398 8.54e-14 75.1
MS.gene62917.t1 AT3G04760 23.274 391 275 13 217 594 123 501 1.03e-13 74.7
MS.gene62917.t1 AT5G39710 22.487 378 250 9 258 596 207 580 9.08e-14 75.1
MS.gene62917.t1 AT1G03560 22.193 383 288 6 214 590 108 486 1.17e-13 74.7
MS.gene62917.t1 AT3G07290 27.230 213 150 3 387 595 184 395 1.49e-13 74.7
MS.gene62917.t1 AT5G65820 22.084 403 299 8 198 592 88 483 1.57e-13 74.3
MS.gene62917.t1 AT1G31840 23.103 580 354 20 87 595 67 625 1.71e-13 74.3
MS.gene62917.t1 AT3G49730 23.483 379 271 11 224 592 99 468 1.77e-13 73.9
MS.gene62917.t1 AT5G59900 22.384 344 255 6 259 596 230 567 4.17e-13 73.2
MS.gene62917.t1 AT1G05600 22.133 375 273 7 236 596 25 394 4.98e-13 72.4
MS.gene62917.t1 AT1G05600 22.133 375 273 7 236 596 25 394 4.98e-13 72.4
MS.gene62917.t1 AT1G05600 22.133 375 273 7 236 596 25 394 4.98e-13 72.4
MS.gene62917.t1 AT1G30290 20.507 434 305 9 202 597 154 585 9.17e-13 72.0
MS.gene62917.t1 AT3G16010 21.300 446 294 11 198 596 69 504 9.35e-13 71.6
MS.gene62917.t1 AT4G31850 21.606 523 382 14 85 590 81 592 9.49e-13 72.0
MS.gene62917.t1 AT1G30290 20.507 434 305 9 202 597 154 585 1.10e-12 71.6
MS.gene62917.t1 AT1G62680 21.114 341 258 8 201 536 167 501 2.74e-12 70.1
MS.gene62917.t1 AT1G62680 21.114 341 258 8 201 536 167 501 2.74e-12 70.1
MS.gene62917.t1 AT4G19440 29.688 192 116 6 416 594 251 436 3.43e-12 70.1
MS.gene62917.t1 AT4G19440 29.688 192 116 6 416 594 251 436 3.43e-12 70.1
MS.gene62917.t1 AT4G19440 29.688 192 116 6 416 594 251 436 3.43e-12 70.1
MS.gene62917.t1 AT4G19440 29.688 192 116 6 416 594 251 436 3.43e-12 70.1
MS.gene62917.t1 AT1G20300 20.779 385 228 8 221 531 110 491 4.22e-12 69.3
MS.gene62917.t1 AT3G22470 21.681 452 293 12 162 572 164 595 4.29e-12 69.7
MS.gene62917.t1 AT1G18900 22.059 476 334 16 172 628 284 741 4.50e-12 69.7
MS.gene62917.t1 AT1G18900 22.059 476 334 16 172 628 284 741 4.50e-12 69.7
MS.gene62917.t1 AT1G18900 22.059 476 334 16 172 628 284 741 4.50e-12 69.7
MS.gene62917.t1 AT1G09900 23.529 306 217 9 301 599 147 442 4.51e-12 69.3
MS.gene62917.t1 AT1G18900 22.059 476 334 16 172 628 284 741 5.65e-12 69.7
MS.gene62917.t1 AT1G80550 22.365 389 263 14 226 593 48 418 8.60e-12 68.2
MS.gene62917.t1 AT4G20740 21.818 440 290 12 192 585 90 521 1.06e-11 68.6
MS.gene62917.t1 AT1G74580 21.739 483 333 9 67 538 222 670 1.17e-11 68.6
MS.gene62917.t1 AT1G74580 21.739 483 333 9 67 538 222 670 1.17e-11 68.6
MS.gene62917.t1 AT1G74580 21.739 483 333 9 67 538 222 670 1.17e-11 68.6
MS.gene62917.t1 AT4G11690 23.344 317 232 8 243 557 229 536 1.54e-11 67.8
MS.gene62917.t1 AT4G11690 23.344 317 232 8 243 557 256 563 1.65e-11 67.8
MS.gene62917.t1 AT2G15630 21.412 439 289 14 187 581 191 617 1.84e-11 67.8
MS.gene62917.t1 AT1G31840 23.495 515 308 18 87 532 67 564 2.60e-11 67.4
MS.gene62917.t1 AT1G12775 20.359 334 254 6 259 586 91 418 2.80e-11 67.0
MS.gene62917.t1 AT3G02650 27.891 294 190 12 315 594 145 430 2.90e-11 67.0
MS.gene62917.t1 AT4G28010 25.532 188 134 4 411 594 225 410 3.01e-11 67.0
MS.gene62917.t1 AT1G74750 20.690 348 240 7 199 513 303 647 3.14e-11 67.0
MS.gene62917.t1 AT1G74750 20.690 348 240 7 199 513 303 647 3.14e-11 67.0
MS.gene62917.t1 AT1G74750 20.690 348 240 7 199 513 303 647 3.14e-11 67.0
MS.gene62917.t1 AT1G74750 20.690 348 240 7 199 513 303 647 3.14e-11 67.0
MS.gene62917.t1 AT5G28370 23.279 494 307 17 160 590 187 671 3.35e-11 67.0
MS.gene62917.t1 AT3G04130 21.702 470 325 16 69 533 69 500 4.38e-11 66.2
MS.gene62917.t1 AT3G04130 21.702 470 325 16 69 533 69 500 4.38e-11 66.2
MS.gene62917.t1 AT1G77360 21.164 378 279 10 221 590 99 465 4.74e-11 66.2
MS.gene62917.t1 AT5G28460 23.279 494 307 17 160 590 187 671 5.53e-11 66.2
MS.gene62917.t1 AT1G77360 21.237 372 274 10 221 584 63 423 5.70e-11 65.9
MS.gene62917.t1 AT1G13040 19.075 346 238 7 193 536 191 496 7.20e-11 65.5
MS.gene62917.t1 AT1G13040 19.075 346 238 7 193 536 191 496 7.20e-11 65.5

Find 163 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATACAAGATTCTTTGTAAA+TGG 0.146220 7.2:+79478255 MS.gene62917:CDS
CACAGATGCCTTAAATCTTT+TGG 0.157867 7.2:+79478355 MS.gene62917:CDS
CATCAGACCCAAAAGATTTA+AGG 0.165184 7.2:-79478363 None:intergenic
ATTAGGGTTTACAAGGAATT+TGG 0.168750 7.2:-79476911 None:intergenic
GAAGAGAAATGACGGAAATT+AGG 0.170623 7.2:-79476928 None:intergenic
CTTTGATATGTGTTCGATAA+AGG 0.190205 7.2:-79478417 None:intergenic
AGAAGAAGCAGCAGCTTCTT+TGG 0.202423 7.2:-79478639 None:intergenic
TAACCAGATGCTGGGAGTTT+TGG 0.227660 7.2:+79477170 MS.gene62917:CDS
GAATGCTTTGACAGATTCTA+TGG 0.234030 7.2:+79477866 MS.gene62917:CDS
AGGATTCGATCGATCGGTTT+TGG 0.238509 7.2:+79477598 MS.gene62917:CDS
GGTTGTTGTTATGAGGAAAA+AGG 0.241522 7.2:+79477227 MS.gene62917:CDS
ATGGAGCCGTTGATGAGTTT+TGG 0.243775 7.2:+79477199 MS.gene62917:CDS
GGAGAAGGAGATTAGGGATT+TGG 0.248189 7.2:+79477419 MS.gene62917:CDS
TTGTAAGAGGAGAATGATTA+AGG 0.270276 7.2:+79477695 MS.gene62917:CDS
GTTAACTTCATTAAGATCTA+TGG 0.272479 7.2:-79477013 None:intergenic
TAGGATTGGGGAGTGGAATA+AGG 0.273285 7.2:+79477923 MS.gene62917:CDS
TGAATTGGTTAAGTTGGTTT+TGG 0.276945 7.2:+79477458 MS.gene62917:CDS
TTTAGGTTCGGAGCCGAATA+AGG 0.281881 7.2:+79477485 MS.gene62917:CDS
ATGAAGTGGAGAAGGAGATT+AGG 0.301581 7.2:+79477412 MS.gene62917:CDS
TGAAGTGGAGAAGGAGATTA+GGG 0.315712 7.2:+79477413 MS.gene62917:CDS
CATCTTTCGCTCTATTCATT+TGG 0.322819 7.2:-79478232 None:intergenic
AGCAGCTTCTTTGGAGTTCA+TGG 0.324488 7.2:-79478630 None:intergenic
TAACAAGTGTTGGTAGGATT+GGG 0.329489 7.2:+79477910 MS.gene62917:CDS
TACAAGGAATTTGGAGTGAT+TGG 0.331289 7.2:-79476902 None:intergenic
GTGTGATCGGGATTGGGTTG+TGG 0.335834 7.2:-79476964 None:intergenic
GAGATTAGGGATTTGGATGT+TGG 0.337035 7.2:+79477426 MS.gene62917:CDS
AAGAGAAATGACGGAAATTA+GGG 0.352828 7.2:-79476927 None:intergenic
AAAGAAGCTGCTGCTTCTTC+TGG 0.357545 7.2:+79478641 MS.gene62917:CDS
ATTAGCTTGTTCCTTGTTAC+CGG 0.360483 7.2:-79478024 None:intergenic
GGATTGGGTTGTGGGATAAC+TGG 0.367830 7.2:-79476955 None:intergenic
CTGCGCGGAGATTGTTCAAA+TGG 0.373427 7.2:+79477106 MS.gene62917:CDS
GTGGATAGAATTGAAGCATA+TGG 0.376496 7.2:+79478053 MS.gene62917:CDS
TGTGATCGGGATTGGGTTGT+GGG 0.380700 7.2:-79476963 None:intergenic
AGTGTACCACGTAATGTTTA+AGG 0.394694 7.2:+79478508 MS.gene62917:CDS
TTTGATATGTGTTCGATAAA+GGG 0.407061 7.2:-79478416 None:intergenic
TTAACAAGTGTTGGTAGGAT+TGG 0.407364 7.2:+79477909 MS.gene62917:CDS
TTCCCAAAACTCCCAGCATC+TGG 0.410804 7.2:-79477173 None:intergenic
TGTCAAAGCATTCCCGTTCC+CGG 0.414639 7.2:-79477856 None:intergenic
TTCGAGTGAATTGGTTAAGT+TGG 0.415673 7.2:+79477452 MS.gene62917:CDS
GATGACGGTGTGATCGGGAT+TGG 0.415960 7.2:-79476971 None:intergenic
AGATTAGGGATTTGGATGTT+GGG 0.422745 7.2:+79477427 MS.gene62917:CDS
GGAAGGTTGTTGGTGATATG+AGG 0.427153 7.2:+79477619 MS.gene62917:CDS
GGGATTTGGTTGTTGTTATG+AGG 0.428330 7.2:+79477220 MS.gene62917:CDS
CGGTGGCGAGGGTGCTTGGA+AGG 0.434983 7.2:+79477574 MS.gene62917:CDS
GCGAAGTGTGTGAGAATGAT+TGG 0.435524 7.2:-79476848 None:intergenic
TCAACGATGACGGTGTGATC+GGG 0.439201 7.2:-79476976 None:intergenic
AATGTTGGAGTATTTCGAAA+AGG 0.439241 7.2:+79477281 MS.gene62917:CDS
CGGTGAAAGGAGGGAAACCT+TGG 0.441831 7.2:-79478391 None:intergenic
TGAAAGAAATGGAAGATTGT+GGG 0.443784 7.2:+79477949 MS.gene62917:CDS
ATACAAGATTCTTTGTAAAT+GGG 0.443889 7.2:+79478256 MS.gene62917:CDS
GATTCCCGCATCTTGCGATC+TGG 0.444605 7.2:-79478083 None:intergenic
CACATATCAAAGCGCGGAAG+TGG 0.446171 7.2:+79478428 MS.gene62917:CDS
ATCAACGATGACGGTGTGAT+CGG 0.450394 7.2:-79476977 None:intergenic
ATGTTGGAGTATTTCGAAAA+GGG 0.450732 7.2:+79477282 MS.gene62917:CDS
AATGCGGTGGCGAGGGTGCT+TGG 0.451396 7.2:+79477570 MS.gene62917:CDS
GCATTTCGACTCGGCGCTAC+CGG 0.451956 7.2:+79478005 MS.gene62917:CDS
ATGACGGTGTGATCGGGATT+GGG 0.453250 7.2:-79476970 None:intergenic
AGTAACCAAGTTGTTGGCTC+AGG 0.455386 7.2:+79478325 MS.gene62917:CDS
CTTTGATTCTTTCAAAGAGA+TGG 0.466170 7.2:+79478148 MS.gene62917:CDS
TTGAAAGAAATGGAAGATTG+TGG 0.466802 7.2:+79477948 MS.gene62917:CDS
TTCGAAAAGGGTGGAATGAA+TGG 0.472046 7.2:+79477294 MS.gene62917:CDS
ACGTGGTACACTGATGTAGA+TGG 0.472265 7.2:-79478497 None:intergenic
CGAAGTGTGTGAGAATGATT+GGG 0.476423 7.2:-79476847 None:intergenic
GCATCGTCGCGAATGAAGCT+TGG 0.478173 7.2:-79478584 None:intergenic
TTCTTTGAGCAAGGAAGGCA+TGG 0.478807 7.2:+79478533 MS.gene62917:CDS
GTTGAAGGAGTTGTTTGGTA+AGG 0.478874 7.2:+79477329 MS.gene62917:CDS
TCGCGACGATGCTGATGTCT+TGG 0.484529 7.2:+79478595 MS.gene62917:CDS
GAGGAAGGTTGTTTCTGCTA+AGG 0.485099 7.2:+79477791 MS.gene62917:CDS
AGTGGATTGTTTAAGCATGA+TGG 0.485938 7.2:+79477537 MS.gene62917:CDS
TGGATAGAATTGAAGCATAT+GGG 0.488664 7.2:+79478054 MS.gene62917:CDS
TTTAGGTGGGTGGAGGAGAG+TGG 0.489143 7.2:+79477519 MS.gene62917:CDS
TTAGTTGAGGGTCATTGTGT+AGG 0.489353 7.2:+79478107 MS.gene62917:CDS
GTTGAGGGTCATTGTGTAGG+TGG 0.490045 7.2:+79478110 MS.gene62917:CDS
AAGGTAAAGCACAGCGGCGT+AGG 0.492418 7.2:-79477762 None:intergenic
ATGCCTTCCTTGCTCAAAGA+AGG 0.493826 7.2:-79478531 None:intergenic
GGGTTGTGGGATAACTGGTT+CGG 0.494568 7.2:-79476950 None:intergenic
TGTAGATGGAAATTTCTTTG+AGG 0.495725 7.2:-79478483 None:intergenic
CTTTACCTTTCTGTTGAGGA+AGG 0.495916 7.2:+79477776 MS.gene62917:CDS
CTGAAATCTTTAACAAGTGT+TGG 0.496864 7.2:+79477900 MS.gene62917:CDS
GGAACAAGCTAATGAGTTTG+TGG 0.497718 7.2:+79478034 MS.gene62917:CDS
CAACAACAATGAGGAATCAA+TGG 0.500901 7.2:+79476785 None:intergenic
AATCTTTAACAAGTGTTGGT+AGG 0.503703 7.2:+79477904 MS.gene62917:CDS
TTGTTGCTAGCGGTGGTTTG+AGG 0.505289 7.2:+79477973 MS.gene62917:CDS
CATCTCTTTGAAAGAATCAA+AGG 0.505896 7.2:-79478147 None:intergenic
GACGGAAATTAGGGTTTACA+AGG 0.507124 7.2:-79476918 None:intergenic
TGGTGGATTTGAGATGGAAG+AGG 0.507469 7.2:+79477644 MS.gene62917:CDS
GGCGAGGGTGCTTGGAAGGG+AGG 0.508134 7.2:+79477578 MS.gene62917:CDS
GTGAAGTTGAAGGAGTTGTT+TGG 0.510969 7.2:+79477324 MS.gene62917:CDS
GGAAATTGACTAGTTTGTGT+AGG 0.512507 7.2:+79477364 MS.gene62917:CDS
TTATACGAGTTTGCTATGGC+TGG 0.512546 7.2:+79477729 MS.gene62917:CDS
AAGAATCAAAGGCCTTATCA+AGG 0.514605 7.2:-79478136 None:intergenic
GCTGCTAGTAACCAAGTTGT+TGG 0.520368 7.2:+79478319 MS.gene62917:CDS
AGGCCTTCTTTGAGCAAGGA+AGG 0.521655 7.2:+79478528 MS.gene62917:CDS
TGCTGCTTCTTCTGGTGTGG+TGG 0.522897 7.2:+79478649 MS.gene62917:CDS
GAAATCGTATAACCAGATGC+TGG 0.524922 7.2:+79477161 MS.gene62917:CDS
TGCGCGGAGATTGTTCAAAT+GGG 0.527437 7.2:+79477107 MS.gene62917:CDS
GAGTTATAATGCGGTGGCGA+GGG 0.527538 7.2:+79477563 MS.gene62917:CDS
CGTAAAATTGCATTTCGACT+CGG 0.528963 7.2:+79477996 MS.gene62917:CDS
TGATTTATACGAGTTTGCTA+TGG 0.530740 7.2:+79477725 MS.gene62917:CDS
TCGATAAAGGGGTCGGTGAA+AGG 0.532634 7.2:-79478404 None:intergenic
GAGGAGTGGTGGATTTGAGA+TGG 0.538154 7.2:+79477638 MS.gene62917:CDS
TTGGAGTATTTCGAAAAGGG+TGG 0.538470 7.2:+79477285 MS.gene62917:CDS
TCCTCCCTGAGCCAACAACT+TGG 0.539355 7.2:-79478330 None:intergenic
GGTGGCGAGGGTGCTTGGAA+GGG 0.540782 7.2:+79477575 MS.gene62917:CDS
GGAGTTATAATGCGGTGGCG+AGG 0.541384 7.2:+79477562 MS.gene62917:CDS
CATCGTGATTGATCAAATCA+AGG 0.542516 7.2:-79477041 None:intergenic
TTTAAGGCCTTCTTTGAGCA+AGG 0.544060 7.2:+79478524 MS.gene62917:CDS
TAGTCCAGATCGCAAGATGC+GGG 0.547375 7.2:+79478079 MS.gene62917:CDS
GGTGAAAGGAGGGAAACCTT+GGG 0.548321 7.2:-79478390 None:intergenic
ATGGGTGAAGGATAGAATGT+TGG 0.550738 7.2:+79477266 MS.gene62917:CDS
TGTAGGTGGGAACCTTGATA+AGG 0.555152 7.2:+79478124 MS.gene62917:CDS
AACAAGTGTTGGTAGGATTG+GGG 0.555476 7.2:+79477911 MS.gene62917:CDS
TGTGCTTTACCTTTCTGTTG+AGG 0.555714 7.2:+79477772 MS.gene62917:CDS
TGGTGTTGCGAAATGGGTGA+AGG 0.556753 7.2:+79477254 MS.gene62917:CDS
ATGCGGGAATCTTTAGTTGA+GGG 0.558287 7.2:+79478095 MS.gene62917:CDS
GTTGGTGATATGAGGAGTGG+TGG 0.561154 7.2:+79477627 MS.gene62917:CDS
AAAGAGGGAGTTGCATCTGC+GGG 0.562684 7.2:+79478176 MS.gene62917:CDS
GGATTGTTTAAGCATGATGG+AGG 0.562715 7.2:+79477540 MS.gene62917:CDS
TTGAGGGTCATTGTGTAGGT+GGG 0.563834 7.2:+79478111 MS.gene62917:CDS
AGCTGCTGCTTCTTCTGGTG+TGG 0.565878 7.2:+79478646 MS.gene62917:CDS
GTGGAGTGATGAAGTGGAGA+AGG 0.567586 7.2:+79477404 MS.gene62917:CDS
TTGGGTCTGATGAGAACCCA+AGG 0.568606 7.2:+79478374 MS.gene62917:CDS
TGGTGATGCTGTGAAGTTGA+AGG 0.572110 7.2:+79477314 MS.gene62917:CDS
TTGATATGTGTTCGATAAAG+GGG 0.574737 7.2:-79478415 None:intergenic
CTAGTTTGTGTAGGATTGTG+AGG 0.577352 7.2:+79477373 MS.gene62917:CDS
AACAACCTTCCTCAACAGAA+AGG 0.580435 7.2:-79477781 None:intergenic
AAATCGTATAACCAGATGCT+GGG 0.582712 7.2:+79477162 MS.gene62917:CDS
GAGATTGTTCAAATGGGTAT+CGG 0.584914 7.2:+79477113 MS.gene62917:CDS
TAAAGGGGTCGGTGAAAGGA+GGG 0.588195 7.2:-79478400 None:intergenic
GATGCGGGAATCTTTAGTTG+AGG 0.591256 7.2:+79478094 MS.gene62917:CDS
CTGGTTCGGAAGAGAAATGA+CGG 0.592985 7.2:-79476936 None:intergenic
ATAAAGGGGTCGGTGAAAGG+AGG 0.594542 7.2:-79478401 None:intergenic
GTAACCAAGTTGTTGGCTCA+GGG 0.596421 7.2:+79478326 MS.gene62917:CDS
GTGTTGGTAGGATTGGGGAG+TGG 0.596778 7.2:+79477916 MS.gene62917:CDS
GATTGTGGGTTTGTTGCTAG+CGG 0.602191 7.2:+79477963 MS.gene62917:CDS
GTGATTGGTGTTGAAACGAA+GGG 0.602586 7.2:-79476887 None:intergenic
TGAAGCTTGGACATTTAGAG+AGG 0.603237 7.2:-79478571 None:intergenic
ACTCGGCGCTACCGGTAACA+AGG 0.605173 7.2:+79478013 MS.gene62917:CDS
GATTGGTGTTGAAACGAAGG+GGG 0.607252 7.2:-79476885 None:intergenic
GAAGGGAGGATTCGATCGAT+CGG 0.610895 7.2:+79477592 MS.gene62917:CDS
AAATGTGTGGAGTGATGAAG+TGG 0.611765 7.2:+79477398 MS.gene62917:CDS
AGTGATTGGTGTTGAAACGA+AGG 0.611958 7.2:-79476888 None:intergenic
TGAAGCTGTTCTGTTACTCA+AGG 0.619719 7.2:+79478454 MS.gene62917:CDS
AATGCTTTGACAGATTCTAT+GGG 0.622482 7.2:+79477867 MS.gene62917:CDS
AAAAGAGGGAGTTGCATCTG+CGG 0.623256 7.2:+79478175 MS.gene62917:CDS
CTAGTCCAGATCGCAAGATG+CGG 0.624466 7.2:+79478078 MS.gene62917:CDS
TGTGGGTTTGTTGCTAGCGG+TGG 0.625962 7.2:+79477966 MS.gene62917:CDS
TTGGTAAGGATACAGTTGAG+AGG 0.628865 7.2:+79477343 MS.gene62917:CDS
TGATTGGTGTTGAAACGAAG+GGG 0.631493 7.2:-79476886 None:intergenic
CGAGAATAAATCAACGATGA+CGG 0.632836 7.2:-79476986 None:intergenic
CAAATCCCAAAACTCATCAA+CGG 0.644268 7.2:-79477205 None:intergenic
GATTGTTTAAGCATGATGGA+GGG 0.656081 7.2:+79477541 MS.gene62917:CDS
TGGAGGGAGTTATAATGCGG+TGG 0.659732 7.2:+79477557 MS.gene62917:CDS
ACCAAGTTGTTGGCTCAGGG+AGG 0.661243 7.2:+79478329 MS.gene62917:CDS
TATGTGTTCGATAAAGGGGT+CGG 0.668044 7.2:-79478411 None:intergenic
AGAAGGCCTTAAACATTACG+TGG 0.670987 7.2:-79478514 None:intergenic
ATCGAACACATATCAAAGCG+CGG 0.694620 7.2:+79478422 MS.gene62917:CDS
GTTGTTGGTGATATGAGGAG+TGG 0.695892 7.2:+79477624 MS.gene62917:CDS
ATTCTGATCTTGATTCTGCG+CGG 0.712748 7.2:+79477091 MS.gene62917:CDS
TGATGGAGGGAGTTATAATG+CGG 0.713062 7.2:+79477554 MS.gene62917:CDS
GAAGTGTGTGAGAATGATTG+GGG 0.723948 7.2:-79476846 None:intergenic
AGCTTGTAAGTAGAATGTCG+AGG 0.733278 7.2:-79478299 None:intergenic
AACAGAAAGGTAAAGCACAG+CGG 0.757430 7.2:-79477768 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACAAGATTCTTTGTAAAT+GGG + chr7.2:79478256-79478275 MS.gene62917:CDS 20.0%
! CATACAAGATTCTTTGTAAA+TGG + chr7.2:79478255-79478274 MS.gene62917:CDS 25.0%
! GTTAACTTCATTAAGATCTA+TGG - chr7.2:79477016-79477035 None:intergenic 25.0%
! TTTGATATGTGTTCGATAAA+GGG - chr7.2:79478419-79478438 None:intergenic 25.0%
!! AAAAATATCAACGCCTTATT+CGG - chr7.2:79477501-79477520 None:intergenic 25.0%
!!! AGATATGAATTTGTTTTCGA+GGG + chr7.2:79477818-79477837 MS.gene62917:CDS 25.0%
!!! ATAAGGCGTTGATATTTTTT+AGG + chr7.2:79477502-79477521 MS.gene62917:CDS 25.0%
!!! GAATAAGGTTTTGAAAGAAA+TGG + chr7.2:79477938-79477957 MS.gene62917:CDS 25.0%
!!! TAGATATGAATTTGTTTTCG+AGG + chr7.2:79477817-79477836 MS.gene62917:CDS 25.0%
AAAGAGATGGTTGAAAAAGA+GGG + chr7.2:79478161-79478180 MS.gene62917:CDS 30.0%
AATGCTTTGACAGATTCTAT+GGG + chr7.2:79477867-79477886 MS.gene62917:CDS 30.0%
ATTAGGGTTTACAAGGAATT+TGG - chr7.2:79476914-79476933 None:intergenic 30.0%
CTGAAATCTTTAACAAGTGT+TGG + chr7.2:79477900-79477919 MS.gene62917:CDS 30.0%
CTTTGATATGTGTTCGATAA+AGG - chr7.2:79478420-79478439 None:intergenic 30.0%
CTTTGATTCTTTCAAAGAGA+TGG + chr7.2:79478148-79478167 MS.gene62917:CDS 30.0%
TGAAAGAAATGGAAGATTGT+GGG + chr7.2:79477949-79477968 MS.gene62917:CDS 30.0%
TGGATAGAATTGAAGCATAT+GGG + chr7.2:79478054-79478073 MS.gene62917:CDS 30.0%
TGTAGATGGAAATTTCTTTG+AGG - chr7.2:79478486-79478505 None:intergenic 30.0%
TTGAAAGAAATGGAAGATTG+TGG + chr7.2:79477948-79477967 MS.gene62917:CDS 30.0%
TTGATATGTGTTCGATAAAG+GGG - chr7.2:79478418-79478437 None:intergenic 30.0%
TTGTAAGAGGAGAATGATTA+AGG + chr7.2:79477695-79477714 MS.gene62917:CDS 30.0%
! AAGAGAAATGACGGAAATTA+GGG - chr7.2:79476930-79476949 None:intergenic 30.0%
! AATGTTGGAGTATTTCGAAA+AGG + chr7.2:79477281-79477300 MS.gene62917:CDS 30.0%
! ACAGATGCCTTAAATCTTTT+GGG + chr7.2:79478356-79478375 MS.gene62917:CDS 30.0%
! ATGTTGGAGTATTTCGAAAA+GGG + chr7.2:79477282-79477301 MS.gene62917:CDS 30.0%
! CATCTCTTTGAAAGAATCAA+AGG - chr7.2:79478150-79478169 None:intergenic 30.0%
! GAGACTTTTGTTAAGGTTTT+GGG + chr7.2:79477666-79477685 MS.gene62917:CDS 30.0%
! GTTGTTGTTATGAGGAAAAA+GGG + chr7.2:79477228-79477247 MS.gene62917:CDS 30.0%
!! AATCTTTAACAAGTGTTGGT+AGG + chr7.2:79477904-79477923 MS.gene62917:CDS 30.0%
!! TGATTTATACGAGTTTGCTA+TGG + chr7.2:79477725-79477744 MS.gene62917:CDS 30.0%
!!! TGAATTGGTTAAGTTGGTTT+TGG + chr7.2:79477458-79477477 MS.gene62917:CDS 30.0%
AAATCGTATAACCAGATGCT+GGG + chr7.2:79477162-79477181 MS.gene62917:CDS 35.0%
AGATTAGGGATTTGGATGTT+GGG + chr7.2:79477427-79477446 MS.gene62917:CDS 35.0%
AGTGTACCACGTAATGTTTA+AGG + chr7.2:79478508-79478527 MS.gene62917:CDS 35.0%
CAAAGAGATGGTTGAAAAAG+AGG + chr7.2:79478160-79478179 MS.gene62917:CDS 35.0%
CAAATCCCAAAACTCATCAA+CGG - chr7.2:79477208-79477227 None:intergenic 35.0%
CATCAGACCCAAAAGATTTA+AGG - chr7.2:79478366-79478385 None:intergenic 35.0%
CATCGTGATTGATCAAATCA+AGG - chr7.2:79477044-79477063 None:intergenic 35.0%
CATCTTTCGCTCTATTCATT+TGG - chr7.2:79478235-79478254 None:intergenic 35.0%
CGAGAATAAATCAACGATGA+CGG - chr7.2:79476989-79477008 None:intergenic 35.0%
CGTAAAATTGCATTTCGACT+CGG + chr7.2:79477996-79478015 MS.gene62917:CDS 35.0%
GAATGCTTTGACAGATTCTA+TGG + chr7.2:79477866-79477885 MS.gene62917:CDS 35.0%
GAGATTGTTCAAATGGGTAT+CGG + chr7.2:79477113-79477132 MS.gene62917:CDS 35.0%
GTGGATAGAATTGAAGCATA+TGG + chr7.2:79478053-79478072 MS.gene62917:CDS 35.0%
TTCGAGTGAATTGGTTAAGT+TGG + chr7.2:79477452-79477471 MS.gene62917:CDS 35.0%
! AAGAATCAAAGGCCTTATCA+AGG - chr7.2:79478139-79478158 None:intergenic 35.0%
! CACAGATGCCTTAAATCTTT+TGG + chr7.2:79478355-79478374 MS.gene62917:CDS 35.0%
! CGATTTCGAACTCAACTTTT+CGG - chr7.2:79477148-79477167 None:intergenic 35.0%
! GAAGAGAAATGACGGAAATT+AGG - chr7.2:79476931-79476950 None:intergenic 35.0%
! GATTGTTTAAGCATGATGGA+GGG + chr7.2:79477541-79477560 MS.gene62917:CDS 35.0%
! GATTTCGAACTCAACTTTTC+GGG - chr7.2:79477147-79477166 None:intergenic 35.0%
! GGAGACTTTTGTTAAGGTTT+TGG + chr7.2:79477665-79477684 MS.gene62917:CDS 35.0%
! GGTTGTTGTTATGAGGAAAA+AGG + chr7.2:79477227-79477246 MS.gene62917:CDS 35.0%
! GTTATGAGGAAAAAGGGTTT+TGG + chr7.2:79477234-79477253 MS.gene62917:CDS 35.0%
! TACAAGGAATTTGGAGTGAT+TGG - chr7.2:79476905-79476924 None:intergenic 35.0%
!! AGTGGATTGTTTAAGCATGA+TGG + chr7.2:79477537-79477556 MS.gene62917:CDS 35.0%
!! ATTAGCTTGTTCCTTGTTAC+CGG - chr7.2:79478027-79478046 None:intergenic 35.0%
!! GGAAATTGACTAGTTTGTGT+AGG + chr7.2:79477364-79477383 MS.gene62917:CDS 35.0%
!! TAACAAGTGTTGGTAGGATT+GGG + chr7.2:79477910-79477929 MS.gene62917:CDS 35.0%
!! TTAACAAGTGTTGGTAGGAT+TGG + chr7.2:79477909-79477928 MS.gene62917:CDS 35.0%
!!! AAGTTGGTTTTGGAGAGTTT+AGG + chr7.2:79477468-79477487 MS.gene62917:CDS 35.0%
!!! AGGCGTTGATATTTTTTAGG+TGG + chr7.2:79477505-79477524 MS.gene62917:CDS 35.0%
!!! CTTTTGTTAAGGTTTTGGGA+CGG + chr7.2:79477670-79477689 MS.gene62917:CDS 35.0%
!!! GGCGTTGATATTTTTTAGGT+GGG + chr7.2:79477506-79477525 MS.gene62917:CDS 35.0%
!!! GTTGATATTTTTTAGGTGGG+TGG + chr7.2:79477509-79477528 MS.gene62917:CDS 35.0%
AAATGTGTGGAGTGATGAAG+TGG + chr7.2:79477398-79477417 MS.gene62917:CDS 40.0%
AACAACCTTCCTCAACAGAA+AGG - chr7.2:79477784-79477803 None:intergenic 40.0%
AACAGAAAGGTAAAGCACAG+CGG - chr7.2:79477771-79477790 None:intergenic 40.0%
AGAAGGCCTTAAACATTACG+TGG - chr7.2:79478517-79478536 None:intergenic 40.0%
AGCTTGTAAGTAGAATGTCG+AGG - chr7.2:79478302-79478321 None:intergenic 40.0%
ATCGAACACATATCAAAGCG+CGG + chr7.2:79478422-79478441 MS.gene62917:CDS 40.0%
ATGAAGTGGAGAAGGAGATT+AGG + chr7.2:79477412-79477431 MS.gene62917:CDS 40.0%
ATGCGGGAATCTTTAGTTGA+GGG + chr7.2:79478095-79478114 MS.gene62917:CDS 40.0%
ATGGGTGAAGGATAGAATGT+TGG + chr7.2:79477266-79477285 MS.gene62917:CDS 40.0%
ATTCTGATCTTGATTCTGCG+CGG + chr7.2:79477091-79477110 MS.gene62917:CDS 40.0%
CGAAGTGTGTGAGAATGATT+GGG - chr7.2:79476850-79476869 None:intergenic 40.0%
CTTTACCTTTCTGTTGAGGA+AGG + chr7.2:79477776-79477795 MS.gene62917:CDS 40.0%
GAAATCGTATAACCAGATGC+TGG + chr7.2:79477161-79477180 MS.gene62917:CDS 40.0%
GAAGTGTGTGAGAATGATTG+GGG - chr7.2:79476849-79476868 None:intergenic 40.0%
GACGGAAATTAGGGTTTACA+AGG - chr7.2:79476921-79476940 None:intergenic 40.0%
GAGATTAGGGATTTGGATGT+TGG + chr7.2:79477426-79477445 MS.gene62917:CDS 40.0%
GGAACAAGCTAATGAGTTTG+TGG + chr7.2:79478034-79478053 MS.gene62917:CDS 40.0%
GGATTGTGAGGAAAAATGTG+TGG + chr7.2:79477385-79477404 MS.gene62917:CDS 40.0%
GGATTGTTTAAGCATGATGG+AGG + chr7.2:79477540-79477559 MS.gene62917:CDS 40.0%
GTGAAGTTGAAGGAGTTGTT+TGG + chr7.2:79477324-79477343 MS.gene62917:CDS 40.0%
GTTGAAGGAGTTGTTTGGTA+AGG + chr7.2:79477329-79477348 MS.gene62917:CDS 40.0%
TATGTGTTCGATAAAGGGGT+CGG - chr7.2:79478414-79478433 None:intergenic 40.0%
TGAAGCTGTTCTGTTACTCA+AGG + chr7.2:79478454-79478473 MS.gene62917:CDS 40.0%
TGAAGCTTGGACATTTAGAG+AGG - chr7.2:79478574-79478593 None:intergenic 40.0%
TGAAGTGGAGAAGGAGATTA+GGG + chr7.2:79477413-79477432 MS.gene62917:CDS 40.0%
TGATGGAGGGAGTTATAATG+CGG + chr7.2:79477554-79477573 MS.gene62917:CDS 40.0%
TGTGCTTTACCTTTCTGTTG+AGG + chr7.2:79477772-79477791 MS.gene62917:CDS 40.0%
TTAGTTGAGGGTCATTGTGT+AGG + chr7.2:79478107-79478126 MS.gene62917:CDS 40.0%
TTCGAAAAGGGTGGAATGAA+TGG + chr7.2:79477294-79477313 MS.gene62917:CDS 40.0%
TTGGTAAGGATACAGTTGAG+AGG + chr7.2:79477343-79477362 MS.gene62917:CDS 40.0%
! CTAGTTTGTGTAGGATTGTG+AGG + chr7.2:79477373-79477392 MS.gene62917:CDS 40.0%
! GAGAATGATTGGGGATTTTG+TGG - chr7.2:79476840-79476859 None:intergenic 40.0%
! GGAAGAGGAGACTTTTGTTA+AGG + chr7.2:79477659-79477678 MS.gene62917:CDS 40.0%
! GGGATTTGGTTGTTGTTATG+AGG + chr7.2:79477220-79477239 MS.gene62917:CDS 40.0%
! TTGAAGGTTTTTACCGGGAA+CGG + chr7.2:79477843-79477862 MS.gene62917:CDS 40.0%
! TTGGAGTATTTCGAAAAGGG+TGG + chr7.2:79477285-79477304 MS.gene62917:CDS 40.0%
! TTTAAGGCCTTCTTTGAGCA+AGG + chr7.2:79478524-79478543 MS.gene62917:CDS 40.0%
!! AACAAGTGTTGGTAGGATTG+GGG + chr7.2:79477911-79477930 MS.gene62917:CDS 40.0%
!! AGTGATTGGTGTTGAAACGA+AGG - chr7.2:79476891-79476910 None:intergenic 40.0%
!! ATGCTGTTAACGCTGTTTTG+AGG + chr7.2:79477061-79477080 MS.gene62917:CDS 40.0%
!! GTGATTGGTGTTGAAACGAA+GGG - chr7.2:79476890-79476909 None:intergenic 40.0%
!! TGATTGGTGTTGAAACGAAG+GGG - chr7.2:79476889-79476908 None:intergenic 40.0%
!! TTATACGAGTTTGCTATGGC+TGG + chr7.2:79477729-79477748 MS.gene62917:CDS 40.0%
!!! AGGGTGTTGAAGGTTTTTAC+CGG + chr7.2:79477837-79477856 MS.gene62917:CDS 40.0%
!!! CGTTGATGAGTTTTGGGATT+TGG + chr7.2:79477206-79477225 MS.gene62917:CDS 40.0%
!!! CTGGGAGTTTTGGGAATTAA+TGG + chr7.2:79477180-79477199 MS.gene62917:CDS 40.0%
!!! GATATTTTTTAGGTGGGTGG+AGG + chr7.2:79477512-79477531 MS.gene62917:CDS 40.0%
!!! GGTTTTGGAGAGTTTAGGTT+CGG + chr7.2:79477473-79477492 MS.gene62917:CDS 40.0%
!!! TGTTGGGTTTTCGAGTGAAT+TGG + chr7.2:79477443-79477462 MS.gene62917:CDS 40.0%
!!! TTTGTTTTCGAGGGTGTTGA+AGG + chr7.2:79477827-79477846 MS.gene62917:CDS 40.0%
!!! TTTTGGGACGGTTTTGTAAG+AGG + chr7.2:79477682-79477701 MS.gene62917:CDS 40.0%
AAAAGAGGGAGTTGCATCTG+CGG + chr7.2:79478175-79478194 MS.gene62917:CDS 45.0%
ACGTGGTACACTGATGTAGA+TGG - chr7.2:79478500-79478519 None:intergenic 45.0%
AGAAGAAGCAGCAGCTTCTT+TGG - chr7.2:79478642-79478661 None:intergenic 45.0%
ATGCCTTCCTTGCTCAAAGA+AGG - chr7.2:79478534-79478553 None:intergenic 45.0%
GATGCGGGAATCTTTAGTTG+AGG + chr7.2:79478094-79478113 MS.gene62917:CDS 45.0%
GCGAAGTGTGTGAGAATGAT+TGG - chr7.2:79476851-79476870 None:intergenic 45.0%
GCTGCTAGTAACCAAGTTGT+TGG + chr7.2:79478319-79478338 MS.gene62917:CDS 45.0%
GGAGAAGGAGATTAGGGATT+TGG + chr7.2:79477419-79477438 MS.gene62917:CDS 45.0%
TAGGATTGGGGAGTGGAATA+AGG + chr7.2:79477923-79477942 MS.gene62917:CDS 45.0%
TGCGCGGAGATTGTTCAAAT+GGG + chr7.2:79477107-79477126 MS.gene62917:CDS 45.0%
TGTAGGTGGGAACCTTGATA+AGG + chr7.2:79478124-79478143 MS.gene62917:CDS 45.0%
TTCTTTGAGCAAGGAAGGCA+TGG + chr7.2:79478533-79478552 MS.gene62917:CDS 45.0%
TTGAGGGTCATTGTGTAGGT+GGG + chr7.2:79478111-79478130 MS.gene62917:CDS 45.0%
! AAAGAAGCTGCTGCTTCTTC+TGG + chr7.2:79478641-79478660 MS.gene62917:CDS 45.0%
! AACCAGATGCTGGGAGTTTT+GGG + chr7.2:79477171-79477190 MS.gene62917:CDS 45.0%
! ATCAACGATGACGGTGTGAT+CGG - chr7.2:79476980-79476999 None:intergenic 45.0%
! TAACCAGATGCTGGGAGTTT+TGG + chr7.2:79477170-79477189 MS.gene62917:CDS 45.0%
! TGAAGGTTTTTACCGGGAAC+GGG + chr7.2:79477844-79477863 MS.gene62917:CDS 45.0%
! TGGTGATGCTGTGAAGTTGA+AGG + chr7.2:79477314-79477333 MS.gene62917:CDS 45.0%
! TTTAGGTTCGGAGCCGAATA+AGG + chr7.2:79477485-79477504 MS.gene62917:CDS 45.0%
!! AGCAGCTTCTTTGGAGTTCA+TGG - chr7.2:79478633-79478652 None:intergenic 45.0%
!! AGGATTCGATCGATCGGTTT+TGG + chr7.2:79477598-79477617 MS.gene62917:CDS 45.0%
!! AGTAACCAAGTTGTTGGCTC+AGG + chr7.2:79478325-79478344 MS.gene62917:CDS 45.0%
!! ATGGAGCCGTTGATGAGTTT+TGG + chr7.2:79477199-79477218 MS.gene62917:CDS 45.0%
!! CTGGTTCGGAAGAGAAATGA+CGG - chr7.2:79476939-79476958 None:intergenic 45.0%
!! GAGGAAGGTTGTTTCTGCTA+AGG + chr7.2:79477791-79477810 MS.gene62917:CDS 45.0%
!! GATTGGTGTTGAAACGAAGG+GGG - chr7.2:79476888-79476907 None:intergenic 45.0%
!! GATTGTGGGTTTGTTGCTAG+CGG + chr7.2:79477963-79477982 MS.gene62917:CDS 45.0%
!! GGAAGGTTGTTGGTGATATG+AGG + chr7.2:79477619-79477638 MS.gene62917:CDS 45.0%
!! GTAACCAAGTTGTTGGCTCA+GGG + chr7.2:79478326-79478345 MS.gene62917:CDS 45.0%
!! GTTGTTGGTGATATGAGGAG+TGG + chr7.2:79477624-79477643 MS.gene62917:CDS 45.0%
!! TGGAGCCGTTGATGAGTTTT+GGG + chr7.2:79477200-79477219 MS.gene62917:CDS 45.0%
!! TGGTGGATTTGAGATGGAAG+AGG + chr7.2:79477644-79477663 MS.gene62917:CDS 45.0%
!!! AGGGTTTTGGTGTTGCGAAA+TGG + chr7.2:79477247-79477266 MS.gene62917:CDS 45.0%
!!! GATCGGTTTTGGAAGGTTGT+TGG + chr7.2:79477609-79477628 MS.gene62917:CDS 45.0%
!!! GGGTGTTGAAGGTTTTTACC+GGG + chr7.2:79477838-79477857 MS.gene62917:CDS 45.0%
!!! GGGTTTTGGTGTTGCGAAAT+GGG + chr7.2:79477248-79477267 MS.gene62917:CDS 45.0%
!!! TTCGATCGATCGGTTTTGGA+AGG + chr7.2:79477602-79477621 MS.gene62917:CDS 45.0%
AAAGAGGGAGTTGCATCTGC+GGG + chr7.2:79478176-79478195 MS.gene62917:CDS 50.0%
AGGCCTTCTTTGAGCAAGGA+AGG + chr7.2:79478528-79478547 MS.gene62917:CDS 50.0%
ATAAAGGGGTCGGTGAAAGG+AGG - chr7.2:79478404-79478423 None:intergenic 50.0%
ATGACGGTGTGATCGGGATT+GGG - chr7.2:79476973-79476992 None:intergenic 50.0%
CACATATCAAAGCGCGGAAG+TGG + chr7.2:79478428-79478447 MS.gene62917:CDS 50.0%
CTAGTCCAGATCGCAAGATG+CGG + chr7.2:79478078-79478097 MS.gene62917:CDS 50.0%
CTGCGCGGAGATTGTTCAAA+TGG + chr7.2:79477106-79477125 MS.gene62917:CDS 50.0%
GAAGGGAGGATTCGATCGAT+CGG + chr7.2:79477592-79477611 MS.gene62917:CDS 50.0%
GAGTTATAATGCGGTGGCGA+GGG + chr7.2:79477563-79477582 MS.gene62917:CDS 50.0%
GGGTTGTGGGATAACTGGTT+CGG - chr7.2:79476953-79476972 None:intergenic 50.0%
GGTGAAAGGAGGGAAACCTT+GGG - chr7.2:79478393-79478412 None:intergenic 50.0%
GTGGAGTGATGAAGTGGAGA+AGG + chr7.2:79477404-79477423 MS.gene62917:CDS 50.0%
GTTGAGGGTCATTGTGTAGG+TGG + chr7.2:79478110-79478129 MS.gene62917:CDS 50.0%
TAAAGGGGTCGGTGAAAGGA+GGG - chr7.2:79478403-79478422 None:intergenic 50.0%
TAGTCCAGATCGCAAGATGC+GGG + chr7.2:79478079-79478098 MS.gene62917:CDS 50.0%
TCGATAAAGGGGTCGGTGAA+AGG - chr7.2:79478407-79478426 None:intergenic 50.0%
TGGAGGGAGTTATAATGCGG+TGG + chr7.2:79477557-79477576 MS.gene62917:CDS 50.0%
TTCCCAAAACTCCCAGCATC+TGG - chr7.2:79477176-79477195 None:intergenic 50.0%
TTGGGTCTGATGAGAACCCA+AGG + chr7.2:79478374-79478393 MS.gene62917:CDS 50.0%
TTGTTGCTAGCGGTGGTTTG+AGG + chr7.2:79477973-79477992 MS.gene62917:CDS 50.0%
! GGATTGGGTTGTGGGATAAC+TGG - chr7.2:79476958-79476977 None:intergenic 50.0%
! TCAACGATGACGGTGTGATC+GGG - chr7.2:79476979-79476998 None:intergenic 50.0%
! TGTCAAAGCATTCCCGTTCC+CGG - chr7.2:79477859-79477878 None:intergenic 50.0%
! TGTGATCGGGATTGGGTTGT+GGG - chr7.2:79476966-79476985 None:intergenic 50.0%
!! GAGGAGTGGTGGATTTGAGA+TGG + chr7.2:79477638-79477657 MS.gene62917:CDS 50.0%
!! GTTGGTGATATGAGGAGTGG+TGG + chr7.2:79477627-79477646 MS.gene62917:CDS 50.0%
!! TGGTGTTGCGAAATGGGTGA+AGG + chr7.2:79477254-79477273 MS.gene62917:CDS 50.0%
AAGGTAAAGCACAGCGGCGT+AGG - chr7.2:79477765-79477784 None:intergenic 55.0%
CGGTGAAAGGAGGGAAACCT+TGG - chr7.2:79478394-79478413 None:intergenic 55.0%
GATTCCCGCATCTTGCGATC+TGG - chr7.2:79478086-79478105 None:intergenic 55.0%
GCATCGTCGCGAATGAAGCT+TGG - chr7.2:79478587-79478606 None:intergenic 55.0%
GGAGTTATAATGCGGTGGCG+AGG + chr7.2:79477562-79477581 MS.gene62917:CDS 55.0%
TCCTCCCTGAGCCAACAACT+TGG - chr7.2:79478333-79478352 None:intergenic 55.0%
TCGCGACGATGCTGATGTCT+TGG + chr7.2:79478595-79478614 MS.gene62917:CDS 55.0%
TTTAGGTGGGTGGAGGAGAG+TGG + chr7.2:79477519-79477538 MS.gene62917:CDS 55.0%
! AGCTGCTGCTTCTTCTGGTG+TGG + chr7.2:79478646-79478665 MS.gene62917:CDS 55.0%
! GATGACGGTGTGATCGGGAT+TGG - chr7.2:79476974-79476993 None:intergenic 55.0%
! GTGTGATCGGGATTGGGTTG+TGG - chr7.2:79476967-79476986 None:intergenic 55.0%
! GTGTTGGTAGGATTGGGGAG+TGG + chr7.2:79477916-79477935 MS.gene62917:CDS 55.0%
! TGCTGCTTCTTCTGGTGTGG+TGG + chr7.2:79478649-79478668 MS.gene62917:CDS 55.0%
!! ACCAAGTTGTTGGCTCAGGG+AGG + chr7.2:79478329-79478348 MS.gene62917:CDS 55.0%
!! TGTGGGTTTGTTGCTAGCGG+TGG + chr7.2:79477966-79477985 MS.gene62917:CDS 55.0%
ACTCGGCGCTACCGGTAACA+AGG + chr7.2:79478013-79478032 MS.gene62917:CDS 60.0%
!! GCATTTCGACTCGGCGCTAC+CGG + chr7.2:79478005-79478024 MS.gene62917:CDS 60.0%
!! AATGCGGTGGCGAGGGTGCT+TGG + chr7.2:79477570-79477589 MS.gene62917:CDS 65.0%
!! GGTGGCGAGGGTGCTTGGAA+GGG + chr7.2:79477575-79477594 MS.gene62917:CDS 65.0%
!! CGGTGGCGAGGGTGCTTGGA+AGG + chr7.2:79477574-79477593 MS.gene62917:CDS 70.0%
!! GGCGAGGGTGCTTGGAAGGG+AGG + chr7.2:79477578-79477597 MS.gene62917:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 79476793 79478679 79476793 ID=MS.gene62917
chr7.2 mRNA 79476793 79478679 79476793 ID=MS.gene62917.t1;Parent=MS.gene62917
chr7.2 exon 79476793 79478679 79476793 ID=MS.gene62917.t1.exon1;Parent=MS.gene62917.t1
chr7.2 CDS 79476793 79478679 79476793 ID=cds.MS.gene62917.t1;Parent=MS.gene62917.t1
Gene Sequence

>MS.gene62917

ATGAGGAATCAATGGCGCATTCTTCATCTTCTTCTTCGCACTCACCACAAAATCCCCAATCATTCTCACACACTTCGCTCTTTCTCTTCAATCCCCCTTCGTTTCAACACCAATCACTCCAAATTCCTTGTAAACCCTAATTTCCGTCATTTCTCTTCCGAACCAGTTATCCCACAACCCAATCCCGATCACACCGTCATCGTTGATTTATTCTCGAAATCCATAGATCTTAATGAAGTTAACAAACACCTTGATTTGATCAATCACGATGCTGTTAACGCTGTTTTGAGGAAATTTGATTCTGATCTTGATTCTGCGCGGAGATTGTTCAAATGGGTATCGGAGAATTGTCCCGAAAAGTTGAGTTCGAAATCGTATAACCAGATGCTGGGAGTTTTGGGAATTAATGGAGCCGTTGATGAGTTTTGGGATTTGGTTGTTGTTATGAGGAAAAAGGGTTTTGGTGTTGCGAAATGGGTGAAGGATAGAATGTTGGAGTATTTCGAAAAGGGTGGAATGAATGGTGATGCTGTGAAGTTGAAGGAGTTGTTTGGTAAGGATACAGTTGAGAGGAAATTGACTAGTTTGTGTAGGATTGTGAGGAAAAATGTGTGGAGTGATGAAGTGGAGAAGGAGATTAGGGATTTGGATGTTGGGTTTTCGAGTGAATTGGTTAAGTTGGTTTTGGAGAGTTTAGGTTCGGAGCCGAATAAGGCGTTGATATTTTTTAGGTGGGTGGAGGAGAGTGGATTGTTTAAGCATGATGGAGGGAGTTATAATGCGGTGGCGAGGGTGCTTGGAAGGGAGGATTCGATCGATCGGTTTTGGAAGGTTGTTGGTGATATGAGGAGTGGTGGATTTGAGATGGAAGAGGAGACTTTTGTTAAGGTTTTGGGACGGTTTTGTAAGAGGAGAATGATTAAGGATGCTGTTGATTTATACGAGTTTGCTATGGCTGGTGTCAACAAGCCTACGCCGCTGTGCTTTACCTTTCTGTTGAGGAAGGTTGTTTCTGCTAAGGAGTTAGATATGAATTTGTTTTCGAGGGTGTTGAAGGTTTTTACCGGGAACGGGAATGCTTTGACAGATTCTATGGGTGATGATGTACTGAAATCTTTAACAAGTGTTGGTAGGATTGGGGAGTGGAATAAGGTTTTGAAAGAAATGGAAGATTGTGGGTTTGTTGCTAGCGGTGGTTTGAGGCGTAAAATTGCATTTCGACTCGGCGCTACCGGTAACAAGGAACAAGCTAATGAGTTTGTGGATAGAATTGAAGCATATGGGTCTAGTCCAGATCGCAAGATGCGGGAATCTTTAGTTGAGGGTCATTGTGTAGGTGGGAACCTTGATAAGGCCTTTGATTCTTTCAAAGAGATGGTTGAAAAAGAGGGAGTTGCATCTGCGGGCTATACTTTTGATGTGTTGATGAATTCATATTGCCAAATGAATAGAGCGAAAGATGCATACAAGATTCTTTGTAAATGGGTGAACGAAAAAGAGTTAAAGCCTCGACATTCTACTTACAAGCTGCTAGTAACCAAGTTGTTGGCTCAGGGAGGATTCACAGATGCCTTAAATCTTTTGGGTCTGATGAGAACCCAAGGTTTCCCTCCTTTCACCGACCCCTTTATCGAACACATATCAAAGCGCGGAAGTGGTGATGAAGCTGTTCTGTTACTCAAGGCAATGACCTCAAAGAAATTTCCATCTACATCAGTGTACCACGTAATGTTTAAGGCCTTCTTTGAGCAAGGAAGGCATGGAGAAGCACAAAATTTCCTCTCTAAATGTCCAAGCTTCATTCGCGACGATGCTGATGTCTTGGATCTCTTTTATTCCATGAACTCCAAAGAAGCTGCTGCTTCTTCTGGTGTGGTGGTTGCTTAA
Protein sequence

>MS.gene62917.t1

MRNQWRILHLLLRTHHKIPNHSHTLRSFSSIPLRFNTNHSKFLVNPNFRHFSSEPVIPQPNPDHTVIVDLFSKSIDLNEVNKHLDLINHDAVNAVLRKFDSDLDSARRLFKWVSENCPEKLSSKSYNQMLGVLGINGAVDEFWDLVVVMRKKGFGVAKWVKDRMLEYFEKGGMNGDAVKLKELFGKDTVERKLTSLCRIVRKNVWSDEVEKEIRDLDVGFSSELVKLVLESLGSEPNKALIFFRWVEESGLFKHDGGSYNAVARVLGREDSIDRFWKVVGDMRSGGFEMEEETFVKVLGRFCKRRMIKDAVDLYEFAMAGVNKPTPLCFTFLLRKVVSAKELDMNLFSRVLKVFTGNGNALTDSMGDDVLKSLTSVGRIGEWNKVLKEMEDCGFVASGGLRRKIAFRLGATGNKEQANEFVDRIEAYGSSPDRKMRESLVEGHCVGGNLDKAFDSFKEMVEKEGVASAGYTFDVLMNSYCQMNRAKDAYKILCKWVNEKELKPRHSTYKLLVTKLLAQGGFTDALNLLGLMRTQGFPPFTDPFIEHISKRGSGDEAVLLLKAMTSKKFPSTSVYHVMFKAFFEQGRHGEAQNFLSKCPSFIRDDADVLDLFYSMNSKEAAASSGVVVA