Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63584.t1 | ABI51616.1 | 74.1 | 58 | 15 | 0 | 133 | 190 | 43 | 100 | 2.80E-15 | 92.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63584.t1 | A0A072VVI8 | 74.1 | 58 | 15 | 0 | 133 | 190 | 43 | 100 | 2.0e-15 | 92.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052519 | MS.gene63584 | 0.802585 | 5.23E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene63584 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene63584 | 0.805122 | 1.55E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene63584 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene63584 | 0.816859 | 4.45E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63584.t1 | MTR_1g062200 | 74.138 | 58 | 15 | 0 | 133 | 190 | 43 | 100 | 1.44e-21 | 92.8 |
| MS.gene63584.t1 | MTR_1g062200 | 74.138 | 58 | 15 | 0 | 133 | 190 | 43 | 100 | 1.65e-21 | 92.8 |
| MS.gene63584.t1 | MTR_2g014020 | 70.149 | 67 | 11 | 2 | 1 | 63 | 174 | 235 | 1.58e-18 | 83.6 |
| MS.gene63584.t1 | MTR_2g014020 | 70.149 | 67 | 11 | 2 | 1 | 63 | 174 | 235 | 3.55e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGGCTCCGAAAGAATATT+TGG | 0.193978 | 3.2:-25144096 | MS.gene63584:CDS |
| TGTGGTATAATTCAAGTTTC+AGG | 0.226928 | 3.2:-25143868 | MS.gene63584:CDS |
| ATATGAGGCTATTGAATTAA+TGG | 0.245046 | 3.2:-25143264 | None:intergenic |
| CCACAAAATCCCAATCTTGC+AGG | 0.344515 | 3.2:+25144035 | None:intergenic |
| AACGGGTTAACCTGCAAGAT+TGG | 0.370398 | 3.2:-25144045 | MS.gene63584:CDS |
| AAGAGTAGAAATCAGGATAA+AGG | 0.374037 | 3.2:-25145390 | MS.gene63584:intron |
| TACCAAAGGGGTGGGACAAT+TGG | 0.379116 | 3.2:-25143666 | MS.gene63584:CDS |
| TTCCAATTGTCCCACCCCTT+TGG | 0.379535 | 3.2:+25143664 | None:intergenic |
| AGGGCTCCGAAAGAATATTT+GGG | 0.393083 | 3.2:-25144095 | MS.gene63584:CDS |
| CTTGTCCCCAAATATTCTTT+CGG | 0.422234 | 3.2:+25144089 | None:intergenic |
| TTTGTGCAGGTGATCTTCAC+TGG | 0.428772 | 3.2:-25144447 | MS.gene63584:intron |
| ATATATAAACAAAATGAATC+AGG | 0.440520 | 3.2:-25144410 | MS.gene63584:intron |
| AGGAACAAAGAGTAGAAATC+AGG | 0.447295 | 3.2:-25145397 | MS.gene63584:CDS |
| ACGGGTTAACCTGCAAGATT+GGG | 0.452697 | 3.2:-25144044 | MS.gene63584:CDS |
| AACACAATCATCAGTCTCCT+TGG | 0.465307 | 3.2:+25143554 | None:intergenic |
| GTTCAAGTGAAAAGAATAAC+GGG | 0.470976 | 3.2:-25144062 | MS.gene63584:CDS |
| ACAGTTCAAATGCTTTAAAG+AGG | 0.485762 | 3.2:-25143844 | MS.gene63584:intron |
| TAATGTTAGCAGGTACCAAA+GGG | 0.489820 | 3.2:-25143679 | MS.gene63584:intron |
| AGCAATCTGAAACGAATCTC+AGG | 0.493772 | 3.2:-25145417 | MS.gene63584:CDS |
| GGTTCAAGTGAAAAGAATAA+CGG | 0.508332 | 3.2:-25144063 | MS.gene63584:CDS |
| TGTCTTTATGCAAACCTACC+AGG | 0.528449 | 3.2:+25145681 | None:intergenic |
| ATTTCATTGCAGTTATGTTG+TGG | 0.530384 | 3.2:-25143886 | MS.gene63584:intron |
| GGATGCAGCAGATGGAAAAC+CGG | 0.530797 | 3.2:-25145523 | MS.gene63584:intron |
| AGCAAAGTACCAGTGCGTAA+TGG | 0.532082 | 3.2:-25143636 | MS.gene63584:CDS |
| TTCAAGAGATAATTTATCCA+AGG | 0.536501 | 3.2:-25143571 | MS.gene63584:CDS |
| CTAATGTTAGCAGGTACCAA+AGG | 0.540904 | 3.2:-25143680 | MS.gene63584:intron |
| TGACAACTTCCATTACGCAC+TGG | 0.576835 | 3.2:+25143627 | None:intergenic |
| AGAATATTTGGGGACAAGAG+TGG | 0.581333 | 3.2:-25144084 | MS.gene63584:CDS |
| AGCACCTAGAAAATGTGTCC+TGG | 0.583146 | 3.2:-25145699 | MS.gene63584:CDS |
| GTATTGCAAGTTCTGATATG+AGG | 0.599423 | 3.2:-25143279 | MS.gene63584:CDS |
| GCTTGCTTTACAATATAGTG+TGG | 0.606518 | 3.2:-25143362 | MS.gene63584:CDS |
| CCTAGAAAATGTGTCCTGGT+AGG | 0.606942 | 3.2:-25145695 | MS.gene63584:intron |
| GTTAGCAGGTACCAAAGGGG+TGG | 0.618021 | 3.2:-25143675 | MS.gene63584:intron |
| GGGCTCCGAAAGAATATTTG+GGG | 0.623730 | 3.2:-25144094 | MS.gene63584:CDS |
| TTAGCAGGTACCAAAGGGGT+GGG | 0.638356 | 3.2:-25143674 | MS.gene63584:intron |
| TGCGTAATGGAAGTTGTCAG+TGG | 0.650318 | 3.2:-25143623 | MS.gene63584:CDS |
| AATGTTAGCAGGTACCAAAG+GGG | 0.753582 | 3.2:-25143678 | MS.gene63584:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAACAAAATGAATC+AGG | - | chr3.2:25144570-25144589 | MS.gene63584:intron | 15.0% |
| !! | ATTTATCTTTAGATAATTAC+TGG | - | chr3.2:25144417-25144436 | MS.gene63584:CDS | 15.0% |
| !! | TTCATATTAGTTATAAAATC+TGG | - | chr3.2:25145172-25145191 | MS.gene63584:intron | 15.0% |
| !!! | ATAAAAGCACAATATTATTA+TGG | + | chr3.2:25144616-25144635 | None:intergenic | 15.0% |
| !!! | CTAAAAGAAAAAATTGATTT+GGG | + | chr3.2:25143733-25143752 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTATTTTGTGAAT+TGG | - | chr3.2:25143393-25143412 | MS.gene63584:intron | 15.0% |
| !! | AAATTAGTCACCTAATTATT+TGG | - | chr3.2:25144653-25144672 | MS.gene63584:intron | 20.0% |
| !! | AATAAATGATACCATTTAAC+AGG | - | chr3.2:25145566-25145585 | MS.gene63584:intron | 20.0% |
| !! | AATTAGTCACCTAATTATTT+GGG | - | chr3.2:25144654-25144673 | MS.gene63584:intron | 20.0% |
| !! | ATAAATGATACCATTTAACA+GGG | - | chr3.2:25145567-25145586 | MS.gene63584:intron | 20.0% |
| !! | ATAAGAGTAGAAAAATGTTA+AGG | + | chr3.2:25144475-25144494 | None:intergenic | 20.0% |
| !! | ATAATTTATATCTATGGTGA+TGG | - | chr3.2:25144227-25144246 | MS.gene63584:intron | 20.0% |
| !! | GATTGCATAATTTATATCTA+TGG | - | chr3.2:25144221-25144240 | MS.gene63584:intron | 20.0% |
| !! | GCTAAAAGAAAAAATTGATT+TGG | + | chr3.2:25143734-25143753 | None:intergenic | 20.0% |
| !! | GGATAAAAATGAACAAAATT+AGG | - | chr3.2:25144822-25144841 | MS.gene63584:intron | 20.0% |
| !! | GTAAAAATATCTTTGGATAT+TGG | + | chr3.2:25145672-25145691 | None:intergenic | 20.0% |
| !! | GTATATTGATATCATAAAAC+AGG | - | chr3.2:25143873-25143892 | MS.gene63584:CDS | 20.0% |
| !! | TTATGCATCTATTGAAATTA+GGG | - | chr3.2:25144042-25144061 | MS.gene63584:CDS | 20.0% |
| !! | TTTATGCATCTATTGAAATT+AGG | - | chr3.2:25144041-25144060 | MS.gene63584:CDS | 20.0% |
| !! | TTTGAAGAAAGAAAAACAAA+AGG | - | chr3.2:25144065-25144084 | MS.gene63584:CDS | 20.0% |
| ! | AAAAGGAATTGTTGAATTTG+TGG | - | chr3.2:25144082-25144101 | MS.gene63584:CDS | 25.0% |
| ! | AAACAAAAGTGAATCGTTAT+TGG | - | chr3.2:25144182-25144201 | MS.gene63584:intron | 25.0% |
| ! | AATTCTAACTGCAGAAAATT+TGG | - | chr3.2:25144800-25144819 | MS.gene63584:intron | 25.0% |
| ! | ATAGCGAGTAAAAATATCTT+TGG | + | chr3.2:25145679-25145698 | None:intergenic | 25.0% |
| ! | ATGATTAAGTAAACAGCAAA+AGG | + | chr3.2:25145520-25145539 | None:intergenic | 25.0% |
| ! | ATTCTAACTGCAGAAAATTT+GGG | - | chr3.2:25144801-25144820 | MS.gene63584:intron | 25.0% |
| ! | GAAAAACGAATTAACACAAA+TGG | + | chr3.2:25143377-25143396 | None:intergenic | 25.0% |
| ! | GGATAAAGGTAAAATATTCA+TGG | - | chr3.2:25143604-25143623 | MS.gene63584:CDS | 25.0% |
| ! | TCATTAGGACTTATATATGT+TGG | - | chr3.2:25144994-25145013 | MS.gene63584:intron | 25.0% |
| ! | TGCAATCGAGAAATATTAAA+AGG | + | chr3.2:25144208-25144227 | None:intergenic | 25.0% |
| ! | TTCAAGAGATAATTTATCCA+AGG | - | chr3.2:25145409-25145428 | MS.gene63584:CDS | 25.0% |
| !! | AATTGATTTCTAATGTTAGC+AGG | - | chr3.2:25145291-25145310 | MS.gene63584:intron | 25.0% |
| !! | AGCATTGTCTATTGAATTTT+TGG | + | chr3.2:25143516-25143535 | None:intergenic | 25.0% |
| !! | ATACTTTTGCAGAATCTATA+TGG | - | chr3.2:25145384-25145403 | MS.gene63584:intron | 25.0% |
| !! | TAGTTGATACCCAAATAATT+AGG | + | chr3.2:25144666-25144685 | None:intergenic | 25.0% |
| !! | TCATAAAACAGGTTTTTGTA+TGG | - | chr3.2:25143884-25143903 | MS.gene63584:intron | 25.0% |
| !! | TGTTTGAAATGAAAATTCTG+TGG | - | chr3.2:25145227-25145246 | MS.gene63584:intron | 25.0% |
| !!! | ATTTCAAACATAGAAGCATT+TGG | + | chr3.2:25145217-25145236 | None:intergenic | 25.0% |
| !!! | GACTAATTTTTGAGTACTAA+AGG | + | chr3.2:25144642-25144661 | None:intergenic | 25.0% |
| !!! | GTTTTCTATTGATTACCTAA+AGG | - | chr3.2:25144844-25144863 | MS.gene63584:intron | 25.0% |
| AAGAGTAGAAATCAGGATAA+AGG | - | chr3.2:25143590-25143609 | MS.gene63584:CDS | 30.0% | |
| AAGTTATGATCCCTGTTAAA+TGG | + | chr3.2:25145580-25145599 | None:intergenic | 30.0% | |
| AGTAAAATGAAGGAAGAATG+TGG | + | chr3.2:25143952-25143971 | None:intergenic | 30.0% | |
| ATTGAATCGCAGTAAAATGA+AGG | + | chr3.2:25143962-25143981 | None:intergenic | 30.0% | |
| ATTTCATTGCAGTTATGTTG+TGG | - | chr3.2:25145094-25145113 | MS.gene63584:intron | 30.0% | |
| CATCTTTAAGTAGCTACTAA+AGG | + | chr3.2:25145063-25145082 | None:intergenic | 30.0% | |
| CGAATTAACACAAATGGTAA+TGG | + | chr3.2:25143371-25143390 | None:intergenic | 30.0% | |
| CTTATCCCTTACACATATTA+CGG | + | chr3.2:25144143-25144162 | None:intergenic | 30.0% | |
| GGTTCAAGTGAAAAGAATAA+CGG | - | chr3.2:25144917-25144936 | MS.gene63584:intron | 30.0% | |
| GTAGAAAAATGTTAAGGAAG+AGG | + | chr3.2:25144469-25144488 | None:intergenic | 30.0% | |
| GTGTCTATGTATCTTATGAA+AGG | - | chr3.2:25144703-25144722 | MS.gene63584:intron | 30.0% | |
| GTTCAAGTGAAAAGAATAAC+GGG | - | chr3.2:25144918-25144937 | MS.gene63584:intron | 30.0% | |
| TAAGATACATAGACACAAAC+TGG | + | chr3.2:25144699-25144718 | None:intergenic | 30.0% | |
| TACCTAAAGGAAGAAGTTAA+GGG | - | chr3.2:25144857-25144876 | MS.gene63584:intron | 30.0% | |
| TATTCAGGCAAGTAATCATT+AGG | - | chr3.2:25144979-25144998 | MS.gene63584:intron | 30.0% | |
| TGATACCGTAATATGTGTAA+GGG | - | chr3.2:25144135-25144154 | MS.gene63584:intron | 30.0% | |
| TTACCTAAAGGAAGAAGTTA+AGG | - | chr3.2:25144856-25144875 | MS.gene63584:intron | 30.0% | |
| ! | ATTGGGATTTTGTGGAATTT+TGG | - | chr3.2:25144953-25144972 | MS.gene63584:intron | 30.0% |
| ! | GAATCTACATTTTCATATGC+CGG | + | chr3.2:25143479-25143498 | None:intergenic | 30.0% |
| ! | GAGATGAATTGAAAAGTACA+AGG | + | chr3.2:25143987-25144006 | None:intergenic | 30.0% |
| ! | TGTAATGTATGACGAGATTT+TGG | + | chr3.2:25144353-25144372 | None:intergenic | 30.0% |
| ! | TGTGGTATAATTCAAGTTTC+AGG | - | chr3.2:25145112-25145131 | MS.gene63584:intron | 30.0% |
| !! | ACAGTTCAAATGCTTTAAAG+AGG | - | chr3.2:25145136-25145155 | MS.gene63584:intron | 30.0% |
| !! | ATGACGAGATTTTGGTAATT+TGG | + | chr3.2:25144345-25144364 | None:intergenic | 30.0% |
| !! | GTGGAATTTTGGAAATATTC+AGG | - | chr3.2:25144964-25144983 | MS.gene63584:intron | 30.0% |
| !!! | AGTATCGTTTTAAAATCCTC+TGG | - | chr3.2:25143756-25143775 | MS.gene63584:intron | 30.0% |
| AATTTGTACATGCTACTACC+AGG | + | chr3.2:25143921-25143940 | None:intergenic | 35.0% | |
| ACAGTGTGCTTCAAACTAAT+TGG | - | chr3.2:25143666-25143685 | MS.gene63584:CDS | 35.0% | |
| AGACACAAACTGGTGATTAA+TGG | + | chr3.2:25144689-25144708 | None:intergenic | 35.0% | |
| AGGAACAAAGAGTAGAAATC+AGG | - | chr3.2:25143583-25143602 | MS.gene63584:CDS | 35.0% | |
| AGTTGAAGTGAGAAGATATC+AGG | + | chr3.2:25143334-25143353 | None:intergenic | 35.0% | |
| ATGAAAGGATCTGTGAAAAC+TGG | - | chr3.2:25144718-25144737 | MS.gene63584:intron | 35.0% | |
| ATGAGTTAATGTAGTCAGAG+TGG | - | chr3.2:25143806-25143825 | MS.gene63584:intron | 35.0% | |
| CTAATCTTTGTTCTCTCCAA+TGG | - | chr3.2:25143427-25143446 | MS.gene63584:intron | 35.0% | |
| CTTGTCCCCAAATATTCTTT+CGG | + | chr3.2:25144894-25144913 | None:intergenic | 35.0% | |
| GAAGAAGTTAAGGGAAGTTA+GGG | - | chr3.2:25144866-25144885 | MS.gene63584:intron | 35.0% | |
| GAGAACAAAGATTAGAAGAC+AGG | + | chr3.2:25143422-25143441 | None:intergenic | 35.0% | |
| GATAAGCTTAGAGGTGAAAT+TGG | - | chr3.2:25144157-25144176 | MS.gene63584:intron | 35.0% | |
| GCTTGCTTTACAATATAGTG+TGG | - | chr3.2:25145618-25145637 | MS.gene63584:intron | 35.0% | |
| GTGATACCGTAATATGTGTA+AGG | - | chr3.2:25144134-25144153 | MS.gene63584:intron | 35.0% | |
| GTTGAAGTGAGAAGATATCA+GGG | + | chr3.2:25143333-25143352 | None:intergenic | 35.0% | |
| TAATGTTAGCAGGTACCAAA+GGG | - | chr3.2:25145301-25145320 | MS.gene63584:intron | 35.0% | |
| TATTACGGTATCACTAACAC+CGG | + | chr3.2:25144128-25144147 | None:intergenic | 35.0% | |
| TCTGACTACATTAACTCATC+AGG | + | chr3.2:25143805-25143824 | None:intergenic | 35.0% | |
| TCTGTGGCTACAAATAGAAA+GGG | - | chr3.2:25145243-25145262 | MS.gene63584:intron | 35.0% | |
| TGTATGGCATACTATAAACC+TGG | - | chr3.2:25143900-25143919 | MS.gene63584:intron | 35.0% | |
| TGTGCTTCAAACTAATTGGT+TGG | - | chr3.2:25143670-25143689 | MS.gene63584:CDS | 35.0% | |
| TTCCCTTAACTTCTTCCTTT+AGG | + | chr3.2:25144862-25144881 | None:intergenic | 35.0% | |
| TTCTGTGGCTACAAATAGAA+AGG | - | chr3.2:25145242-25145261 | MS.gene63584:intron | 35.0% | |
| ! | GTATTGCAAGTTCTGATATG+AGG | - | chr3.2:25145701-25145720 | MS.gene63584:CDS | 35.0% |
| !! | TCAACATCTGCATTGACTAA+CGG | - | chr3.2:25144285-25144304 | MS.gene63584:intron | 35.0% |
| !! | TTATATCTATGGTGATGGTG+CGG | - | chr3.2:25144232-25144251 | MS.gene63584:intron | 35.0% |
| AACACAATCATCAGTCTCCT+TGG | + | chr3.2:25145429-25145448 | None:intergenic | 40.0% | |
| AATGTTAGCAGGTACCAAAG+GGG | - | chr3.2:25145302-25145321 | MS.gene63584:intron | 40.0% | |
| ACTCACCTAAGTAGTGTTTG+AGG | + | chr3.2:25144311-25144330 | None:intergenic | 40.0% | |
| AGAACAATGTCTGTAACAGC+CGG | - | chr3.2:25144106-25144125 | MS.gene63584:intron | 40.0% | |
| AGAATATTTGGGGACAAGAG+TGG | - | chr3.2:25144896-25144915 | MS.gene63584:intron | 40.0% | |
| AGGGCTCCGAAAGAATATTT+GGG | - | chr3.2:25144885-25144904 | MS.gene63584:intron | 40.0% | |
| CGACAAGATTTAACTACCAG+AGG | + | chr3.2:25143775-25143794 | None:intergenic | 40.0% | |
| CTAATGTTAGCAGGTACCAA+AGG | - | chr3.2:25145300-25145319 | MS.gene63584:intron | 40.0% | |
| GGAAGAAGTTAAGGGAAGTT+AGG | - | chr3.2:25144865-25144884 | MS.gene63584:intron | 40.0% | |
| GTTAGTCAATGCAGATGTTG+AGG | + | chr3.2:25144286-25144305 | None:intergenic | 40.0% | |
| TAAGGAAGAGGTTTAGAGAG+AGG | + | chr3.2:25144457-25144476 | None:intergenic | 40.0% | |
| TAGGGCTCCGAAAGAATATT+TGG | - | chr3.2:25144884-25144903 | MS.gene63584:intron | 40.0% | |
| TGTCTTTATGCAAACCTACC+AGG | + | chr3.2:25143302-25143321 | None:intergenic | 40.0% | |
| TGTGTAAGGGATAAGCTTAG+AGG | - | chr3.2:25144148-25144167 | MS.gene63584:intron | 40.0% | |
| ! | AGCAATCTGAAACGAATCTC+AGG | - | chr3.2:25143563-25143582 | MS.gene63584:CDS | 40.0% |
| ! | ATCGATTTCAACCTGCAGAA+AGG | + | chr3.2:25143838-25143857 | None:intergenic | 40.0% |
| ! | GACACATTTTCTAGGTGCTA+CGG | + | chr3.2:25143280-25143299 | None:intergenic | 40.0% |
| !! | ACACATTTTCTAGGTGCTAC+GGG | + | chr3.2:25143279-25143298 | None:intergenic | 40.0% |
| !! | TATATCTATGGTGATGGTGC+GGG | - | chr3.2:25144233-25144252 | MS.gene63584:intron | 40.0% |
| !! | TTGATTCCTGAGTTTTGTGC+AGG | - | chr3.2:25144520-25144539 | MS.gene63584:intron | 40.0% |
| AACGGCCTCAAACACTACTT+AGG | - | chr3.2:25144303-25144322 | MS.gene63584:intron | 45.0% | |
| AGATCACCTGCACAAAACTC+AGG | + | chr3.2:25144529-25144548 | None:intergenic | 45.0% | |
| AGCACCTAGAAAATGTGTCC+TGG | - | chr3.2:25143281-25143300 | MS.gene63584:CDS | 45.0% | |
| AGTGGCAAAAACCTTTCTGC+AGG | - | chr3.2:25143824-25143843 | MS.gene63584:intron | 45.0% | |
| CCACAAAATCCCAATCTTGC+AGG | + | chr3.2:25144948-25144967 | None:intergenic | 45.0% | |
| CCTAGAAAATGTGTCCTGGT+AGG | - | chr3.2:25143285-25143304 | MS.gene63584:CDS | 45.0% | |
| GGGCTCCGAAAGAATATTTG+GGG | - | chr3.2:25144886-25144905 | MS.gene63584:intron | 45.0% | |
| GTTCTCTCCAATGGAATGTG+TGG | - | chr3.2:25143436-25143455 | MS.gene63584:intron | 45.0% | |
| TGACAACTTCCATTACGCAC+TGG | + | chr3.2:25145356-25145375 | None:intergenic | 45.0% | |
| TTTGTGCAGGTGATCTTCAC+TGG | - | chr3.2:25144533-25144552 | MS.gene63584:intron | 45.0% | |
| ! | ACGGGTTAACCTGCAAGATT+GGG | - | chr3.2:25144936-25144955 | MS.gene63584:intron | 45.0% |
| ! | AGCAAAGTACCAGTGCGTAA+TGG | - | chr3.2:25145344-25145363 | MS.gene63584:intron | 45.0% |
| ! | CCTACCAGGACACATTTTCT+AGG | + | chr3.2:25143288-25143307 | None:intergenic | 45.0% |
| ! | CCTGCAAGATTGGGATTTTG+TGG | - | chr3.2:25144945-25144964 | MS.gene63584:intron | 45.0% |
| ! | TGCGTAATGGAAGTTGTCAG+TGG | - | chr3.2:25145357-25145376 | MS.gene63584:intron | 45.0% |
| !! | AACGGGTTAACCTGCAAGAT+TGG | - | chr3.2:25144935-25144954 | MS.gene63584:intron | 45.0% |
| !! | ATATCTATGGTGATGGTGCG+GGG | - | chr3.2:25144234-25144253 | MS.gene63584:intron | 45.0% |
| GAATGTGTGGATGCAGCAGA+TGG | - | chr3.2:25143449-25143468 | MS.gene63584:intron | 50.0% | |
| GCTGCATCCACACATTCCAT+TGG | + | chr3.2:25143446-25143465 | None:intergenic | 50.0% | |
| GGATGCAGCAGATGGAAAAC+CGG | - | chr3.2:25143457-25143476 | MS.gene63584:intron | 50.0% | |
| TACCAAAGGGGTGGGACAAT+TGG | - | chr3.2:25145314-25145333 | MS.gene63584:intron | 50.0% | |
| TTAGCAGGTACCAAAGGGGT+GGG | - | chr3.2:25145306-25145325 | MS.gene63584:intron | 50.0% | |
| TTCCAATTGTCCCACCCCTT+TGG | + | chr3.2:25145319-25145338 | None:intergenic | 50.0% | |
| GTTAGCAGGTACCAAAGGGG+TGG | - | chr3.2:25145305-25145324 | MS.gene63584:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 25143267 | 25145735 | 25143267 | ID=MS.gene63584 |
| chr3.2 | mRNA | 25143267 | 25145735 | 25143267 | ID=MS.gene63584.t1;Parent=MS.gene63584 |
| chr3.2 | exon | 25145696 | 25145735 | 25145696 | ID=MS.gene63584.t1.exon1;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25145696 | 25145735 | 25145696 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25145391 | 25145537 | 25145391 | ID=MS.gene63584.t1.exon2;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25145391 | 25145537 | 25145391 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25144411 | 25144460 | 25144411 | ID=MS.gene63584.t1.exon3;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25144411 | 25144460 | 25144411 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25144013 | 25144115 | 25144013 | ID=MS.gene63584.t1.exon4;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25144013 | 25144115 | 25144013 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25143845 | 25143896 | 25143845 | ID=MS.gene63584.t1.exon5;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25143845 | 25143896 | 25143845 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25143533 | 25143689 | 25143533 | ID=MS.gene63584.t1.exon6;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25143533 | 25143689 | 25143533 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| chr3.2 | exon | 25143267 | 25143383 | 25143267 | ID=MS.gene63584.t1.exon7;Parent=MS.gene63584.t1 |
| chr3.2 | CDS | 25143267 | 25143383 | 25143267 | ID=cds.MS.gene63584.t1;Parent=MS.gene63584.t1 |
| Gene Sequence |
| Protein sequence |
