Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63671.t1 | PNY16011.1 | 62.9 | 318 | 89 | 3 | 6 | 297 | 452 | 766 | 2.10E-113 | 419.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63671.t1 | Q9C5D3 | 85.7 | 42 | 6 | 0 | 297 | 338 | 101 | 142 | 4.1e-12 | 73.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63671.t1 | A0A2K3PL42 | 62.9 | 318 | 89 | 3 | 6 | 297 | 452 | 766 | 1.5e-113 | 419.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05414 | MS.gene63671 | 0.823199 | 1.57E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene63671 | 0.828794 | 7.37E-55 | -1.69E-46 |
| MS.gene05435 | MS.gene63671 | 0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene63671 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene058515 | MS.gene63671 | 0.80399 | 2.68E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene63671 | 0.82878 | 7.43E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63671.t1 | MTR_1g054775 | 56.875 | 320 | 105 | 5 | 4 | 297 | 562 | 874 | 1.54e-113 | 361 |
| MS.gene63671.t1 | MTR_8g096700 | 92.593 | 54 | 4 | 0 | 297 | 350 | 79 | 132 | 1.96e-25 | 105 |
| MS.gene63671.t1 | MTR_0111s0070 | 28.125 | 256 | 149 | 6 | 46 | 271 | 172 | 422 | 6.69e-24 | 103 |
| MS.gene63671.t1 | MTR_6g009010 | 31.500 | 200 | 125 | 5 | 49 | 239 | 53 | 249 | 6.98e-20 | 88.6 |
| MS.gene63671.t1 | MTR_8g442690 | 26.957 | 230 | 132 | 7 | 100 | 297 | 49 | 274 | 6.05e-19 | 88.6 |
| MS.gene63671.t1 | MTR_4g122570 | 25.455 | 275 | 154 | 5 | 1 | 274 | 244 | 468 | 7.46e-19 | 88.2 |
| MS.gene63671.t1 | MTR_3g099030 | 78.182 | 55 | 11 | 1 | 297 | 351 | 62 | 115 | 1.67e-18 | 84.7 |
| MS.gene63671.t1 | MTR_2g055450 | 29.752 | 242 | 125 | 8 | 64 | 276 | 101 | 326 | 2.46e-18 | 86.3 |
| MS.gene63671.t1 | MTR_0036s0160 | 36.893 | 103 | 64 | 1 | 172 | 274 | 3 | 104 | 4.41e-18 | 82.8 |
| MS.gene63671.t1 | MTR_6g034215 | 26.241 | 282 | 184 | 6 | 3 | 269 | 6 | 278 | 5.01e-18 | 84.3 |
| MS.gene63671.t1 | MTR_8g098280 | 24.812 | 266 | 170 | 6 | 1 | 239 | 4 | 266 | 1.91e-17 | 83.2 |
| MS.gene63671.t1 | MTR_0042s0130 | 28.326 | 233 | 133 | 8 | 57 | 261 | 79 | 305 | 9.09e-17 | 80.9 |
| MS.gene63671.t1 | MTR_3g099040 | 86.047 | 43 | 6 | 0 | 297 | 339 | 62 | 104 | 9.77e-17 | 80.1 |
| MS.gene63671.t1 | MTR_4g006650 | 80.000 | 45 | 9 | 0 | 295 | 339 | 193 | 237 | 1.26e-16 | 80.1 |
| MS.gene63671.t1 | MTR_1g059490 | 23.904 | 251 | 135 | 6 | 47 | 267 | 248 | 472 | 5.25e-16 | 79.7 |
| MS.gene63671.t1 | MTR_2g078880 | 28.743 | 167 | 109 | 3 | 48 | 206 | 28 | 192 | 2.39e-15 | 74.7 |
| MS.gene63671.t1 | MTR_2g018005 | 29.121 | 182 | 102 | 4 | 48 | 205 | 51 | 229 | 2.65e-15 | 74.7 |
| MS.gene63671.t1 | MTR_5g058210 | 22.311 | 251 | 134 | 6 | 46 | 272 | 13 | 226 | 7.47e-15 | 74.7 |
| MS.gene63671.t1 | MTR_0665s0030 | 25.683 | 183 | 108 | 4 | 47 | 205 | 14 | 192 | 6.08e-14 | 70.9 |
| MS.gene63671.t1 | MTR_1g100687 | 28.634 | 227 | 122 | 8 | 88 | 278 | 4 | 226 | 1.92e-13 | 69.7 |
| MS.gene63671.t1 | MTR_0001s0070 | 25.000 | 200 | 121 | 5 | 46 | 221 | 13 | 207 | 3.37e-13 | 68.6 |
| MS.gene63671.t1 | MTR_2g046450 | 30.282 | 142 | 91 | 3 | 129 | 264 | 276 | 415 | 3.66e-12 | 67.8 |
| MS.gene63671.t1 | MTR_8g470880 | 31.579 | 152 | 79 | 3 | 98 | 225 | 373 | 523 | 5.53e-12 | 67.4 |
| MS.gene63671.t1 | MTR_4g052090 | 38.961 | 77 | 47 | 0 | 168 | 244 | 36 | 112 | 1.01e-11 | 65.9 |
| MS.gene63671.t1 | MTR_8g467090 | 33.945 | 109 | 65 | 2 | 164 | 266 | 251 | 358 | 4.63e-11 | 63.9 |
| MS.gene63671.t1 | MTR_6g046587 | 24.444 | 180 | 111 | 3 | 71 | 226 | 100 | 278 | 8.75e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63671.t1 | AT5G50740 | 80.851 | 47 | 9 | 0 | 295 | 341 | 53 | 99 | 9.81e-19 | 82.8 |
| MS.gene63671.t1 | AT5G50740 | 80.851 | 47 | 9 | 0 | 295 | 341 | 60 | 106 | 1.13e-18 | 82.8 |
| MS.gene63671.t1 | AT5G50740 | 84.444 | 45 | 7 | 0 | 297 | 341 | 55 | 99 | 1.53e-17 | 82.4 |
| MS.gene63671.t1 | AT5G50740 | 84.444 | 45 | 7 | 0 | 297 | 341 | 55 | 99 | 1.53e-17 | 82.4 |
| MS.gene63671.t1 | AT5G50740 | 84.444 | 45 | 7 | 0 | 297 | 341 | 62 | 106 | 1.77e-17 | 82.4 |
| MS.gene63671.t1 | AT5G63530 | 76.190 | 63 | 14 | 1 | 297 | 359 | 86 | 147 | 9.75e-15 | 75.1 |
| MS.gene63671.t1 | AT5G63530 | 73.846 | 65 | 16 | 1 | 295 | 359 | 99 | 162 | 9.99e-15 | 75.1 |
Find 86 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGTTCTGAAGGTGGTTT+TGG | 0.150297 | 3.3:+1991672 | None:intergenic |
| GTGGAGGAGTTCGGCCTTTC+AGG | 0.156353 | 3.3:-1996702 | MS.gene63671:CDS |
| TCTCACAAGGTTGTTGTTAA+AGG | 0.201668 | 3.3:-1991774 | MS.gene63671:CDS |
| GAAAGTTTGTGGATCAAATC+AGG | 0.332609 | 3.3:+1996613 | None:intergenic |
| TTGGAACAAGGCGAACTTGC+AGG | 0.350214 | 3.3:-1997204 | MS.gene63671:CDS |
| CCGAAGGGATATGGTTGCTT+TGG | 0.352097 | 3.3:-1997223 | MS.gene63671:CDS |
| TTGTTAGAGGTTCACACTAT+AGG | 0.359150 | 3.3:-1996907 | MS.gene63671:intron |
| CACACATACCTCAGAAGAAT+AGG | 0.379393 | 3.3:+1991921 | None:intergenic |
| GTAGACTAGTGGCAGAGAAT+TGG | 0.380953 | 3.3:-1996645 | MS.gene63671:CDS |
| AATTGATGTGTTTCACGATC+AGG | 0.383968 | 3.3:-1997506 | None:intergenic |
| TCAATTAAAGTACTGGAATC+AGG | 0.388124 | 3.3:-1996578 | MS.gene63671:CDS |
| GAGGTTTCTCCGAAGGGATA+TGG | 0.389228 | 3.3:-1997232 | MS.gene63671:CDS |
| GGATGATCTGCAATTCCGTT+TGG | 0.393696 | 3.3:+1991943 | None:intergenic |
| CCCTTTAGTGATTCTTTCTG+AGG | 0.408463 | 3.3:-1996737 | MS.gene63671:CDS |
| GATGATCTGCAATTCCGTTT+GGG | 0.412498 | 3.3:+1991944 | None:intergenic |
| TGACCTTGGCGAAACCTTCA+TGG | 0.417923 | 3.3:+1996785 | None:intergenic |
| ACTCTTTCAAGAACCTTCAA+TGG | 0.419505 | 3.3:+1991738 | None:intergenic |
| AGTACTTTAATTGAGTAGTA+AGG | 0.422131 | 3.3:+1996587 | None:intergenic |
| TACTGGAATCAGGATACCTT+TGG | 0.426652 | 3.3:-1996568 | MS.gene63671:CDS |
| CGGAGAACTATTAAGAGCTT+GGG | 0.429105 | 3.3:-1997284 | MS.gene63671:CDS |
| CTTTAATTGAGTAGTAAGGT+TGG | 0.443034 | 3.3:+1996591 | None:intergenic |
| CTGTCATGCCCATTCCACTT+TGG | 0.449565 | 3.3:+1996862 | None:intergenic |
| GAAATCACCCATCATTATCC+AGG | 0.453954 | 3.3:+1997022 | None:intergenic |
| TCGGAGAACTATTAAGAGCT+TGG | 0.455704 | 3.3:-1997285 | MS.gene63671:CDS |
| TTACTACTCAATTAAAGTAC+TGG | 0.463334 | 3.3:-1996585 | MS.gene63671:CDS |
| TAGTAAGGTTGGAAAGTTTG+TGG | 0.465338 | 3.3:+1996602 | None:intergenic |
| GGAGAGGGCCAAAGTGGAAT+GGG | 0.472268 | 3.3:-1996870 | MS.gene63671:CDS |
| TGCCTTACAGTGGAGGAGTT+CGG | 0.475938 | 3.3:-1996711 | MS.gene63671:CDS |
| CTATAGGAACAAAGTTTACA+TGG | 0.480611 | 3.3:-1996891 | MS.gene63671:CDS |
| TCTGCAATTCCGTTTGGGAT+CGG | 0.488973 | 3.3:+1991949 | None:intergenic |
| ACACATACCTCAGAAGAATA+GGG | 0.489219 | 3.3:+1991922 | None:intergenic |
| GTGATGGTCTGATTGAACTC+TGG | 0.489920 | 3.3:+1996759 | None:intergenic |
| CCTAGGTCGCCGATCCCAAA+CGG | 0.496575 | 3.3:-1991958 | MS.gene63671:intron |
| GTGTTCTTTGTAATGTGGCT+TGG | 0.500178 | 3.3:-1996819 | MS.gene63671:CDS |
| CCTTTAGTGATTCTTTCTGA+GGG | 0.501258 | 3.3:-1996736 | MS.gene63671:CDS |
| GGCCGAACTCCTCCACTGTA+AGG | 0.505238 | 3.3:+1996709 | None:intergenic |
| CCTCAGAAAGAATCACTAAA+GGG | 0.505719 | 3.3:+1996737 | None:intergenic |
| AGAATGAGAGACGTGATGCT+TGG | 0.509043 | 3.3:-1997082 | MS.gene63671:CDS |
| TCAAGAGCCCTGGATAATGA+TGG | 0.510984 | 3.3:-1997030 | MS.gene63671:CDS |
| TGATGGTCTGATTGAACTCT+GGG | 0.511478 | 3.3:+1996760 | None:intergenic |
| CCGCTTGAAAATATTTCCAA+AGG | 0.519817 | 3.3:+1996552 | None:intergenic |
| GATATGGTTGCTTTGGAACA+AGG | 0.521878 | 3.3:-1997216 | MS.gene63671:CDS |
| TTCATGTTCGGGTGCAAGAG+AGG | 0.522417 | 3.3:-1997151 | MS.gene63671:CDS |
| TGGAGAGGGCCAAAGTGGAA+TGG | 0.522679 | 3.3:-1996871 | MS.gene63671:CDS |
| CTAGTAGTATTCAAGAGCCC+TGG | 0.537084 | 3.3:-1997040 | MS.gene63671:CDS |
| GTTGTAGTGGTATGACTGCT+CGG | 0.538175 | 3.3:-1997304 | MS.gene63671:CDS |
| CCCTCAGAAAGAATCACTAA+AGG | 0.538487 | 3.3:+1996736 | None:intergenic |
| GGAAGAAAAGAAAGCTGAAG+AGG | 0.538975 | 3.3:-1991613 | MS.gene63671:CDS |
| CTGCAAGAGCCTCGTTGTAG+TGG | 0.543609 | 3.3:-1997317 | MS.gene63671:CDS |
| TGGCGTCTTAAATTCCATGA+AGG | 0.549418 | 3.3:-1996799 | MS.gene63671:CDS |
| GGAAGAAAGAGCTCTTAGCC+AGG | 0.550448 | 3.3:-1996531 | MS.gene63671:intron |
| GAGGGTGTGCCTTACAGTGG+AGG | 0.552833 | 3.3:-1996718 | MS.gene63671:CDS |
| AAGAGAGGGACATGGATCCT+TGG | 0.553174 | 3.3:-1997136 | MS.gene63671:CDS |
| GATTTATAATTATGAAGATG+TGG | 0.554215 | 3.3:-1991811 | MS.gene63671:CDS |
| GAAGCTAGAGGTTTCTCCGA+AGG | 0.555111 | 3.3:-1997239 | MS.gene63671:CDS |
| CCAAAGCAACCATATCCCTT+CGG | 0.559279 | 3.3:+1997223 | None:intergenic |
| TGGAATTGTAGGGGTGCTCA+AGG | 0.562036 | 3.3:-1997401 | MS.gene63671:intron |
| TCATGTTCGGGTGCAAGAGA+GGG | 0.565022 | 3.3:-1997150 | MS.gene63671:CDS |
| GCAGGTGACTGTTATTCAAG+AGG | 0.568909 | 3.3:-1997186 | MS.gene63671:CDS |
| TGATCGTGTTCTTTGTAATG+TGG | 0.573790 | 3.3:-1996824 | MS.gene63671:CDS |
| TTTCAGGTTTGAGTCTGCGT+GGG | 0.574130 | 3.3:-1996686 | MS.gene63671:CDS |
| TCTGAGGGTGTGCCTTACAG+TGG | 0.574617 | 3.3:-1996721 | MS.gene63671:CDS |
| TTGAACTCTGGGAATGACCT+TGG | 0.578384 | 3.3:+1996771 | None:intergenic |
| GGAACAAAGTTTACATGGAG+AGG | 0.579202 | 3.3:-1996886 | MS.gene63671:CDS |
| AAGCTAGAGGTTTCTCCGAA+GGG | 0.581691 | 3.3:-1997238 | MS.gene63671:CDS |
| CAAGAGCCCTGGATAATGAT+GGG | 0.583238 | 3.3:-1997029 | MS.gene63671:CDS |
| CTTTCAGGTTTGAGTCTGCG+TGG | 0.583271 | 3.3:-1996687 | MS.gene63671:CDS |
| TATTTACTTTCTGAAGCTAG+AGG | 0.586489 | 3.3:-1997251 | MS.gene63671:CDS |
| GAAAGAGAAACCTAAGCCAG+AGG | 0.586865 | 3.3:-1991634 | MS.gene63671:CDS |
| AAAGAATCACTAAAGGGTGA+TGG | 0.587453 | 3.3:+1996743 | None:intergenic |
| CAGTGGTATATGCTAGTCCA+CGG | 0.590566 | 3.3:-1997106 | MS.gene63671:CDS |
| AAAGTTTGTGGATCAAATCA+GGG | 0.593948 | 3.3:+1996614 | None:intergenic |
| GAACAAAGTTTACATGGAGA+GGG | 0.604012 | 3.3:-1996885 | MS.gene63671:CDS |
| AGATCATCCCTATTCTTCTG+AGG | 0.615527 | 3.3:-1991929 | MS.gene63671:intron |
| TACTGATTGCAAATCTCACA+AGG | 0.615533 | 3.3:-1991787 | MS.gene63671:CDS |
| ATTCCATGAAGGTTTCGCCA+AGG | 0.622321 | 3.3:-1996788 | MS.gene63671:CDS |
| CACGCAGACTCAAACCTGAA+AGG | 0.623678 | 3.3:+1996688 | None:intergenic |
| TCACGTCTCTCATTCTCCCG+TGG | 0.626935 | 3.3:+1997089 | None:intergenic |
| AAATCACCCATCATTATCCA+GGG | 0.629090 | 3.3:+1997023 | None:intergenic |
| AGTGGTATATGCTAGTCCAC+GGG | 0.633892 | 3.3:-1997105 | MS.gene63671:CDS |
| GGATCCTTGGTTACTTACAG+TGG | 0.642607 | 3.3:-1997123 | MS.gene63671:CDS |
| TTACATGGAGAGGGCCAAAG+TGG | 0.643740 | 3.3:-1996876 | MS.gene63671:CDS |
| AGGTTCTTGAAAGAGTTCAG+AGG | 0.645167 | 3.3:-1991731 | MS.gene63671:CDS |
| TATACCACTGTAAGTAACCA+AGG | 0.659750 | 3.3:+1997119 | None:intergenic |
| TCGGGTGCAAGAGAGGGACA+TGG | 0.673184 | 3.3:-1997144 | MS.gene63671:CDS |
| GCAGTCATACCACTACAACG+AGG | 0.829506 | 3.3:+1997308 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAATTATAATATG+GGG | + | chr3.3:1995579-1995598 | None:intergenic | 10.0% |
| !! | TTCTAATAAATAATATTTCT+CGG | - | chr3.3:1995412-1995431 | MS.gene63671:intron | 10.0% |
| !!! | AATTATGAAATTTTTATGTT+GGG | + | chr3.3:1992847-1992866 | None:intergenic | 10.0% |
| !!! | TAATTATGAAATTTTTATGT+TGG | + | chr3.3:1992848-1992867 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTAAAATGAAAT+CGG | + | chr3.3:1996798-1996817 | None:intergenic | 10.0% |
| !! | CTATAAAATCTATTTATTTG+TGG | - | chr3.3:1995542-1995561 | MS.gene63671:intron | 15.0% |
| !!! | AGGTTTTAATATCAAAATTT+AGG | - | chr3.3:1994880-1994899 | MS.gene63671:intron | 15.0% |
| !!! | AGTTGGTTTTTAAAATTAAT+CGG | + | chr3.3:1995724-1995743 | None:intergenic | 15.0% |
| !!! | ATAAACTATTTTGAATAAGT+TGG | + | chr3.3:1996390-1996409 | None:intergenic | 15.0% |
| !!! | CAAATAAATAGATTTTATAG+TGG | + | chr3.3:1995542-1995561 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTTTTGAAAGAA+AGG | + | chr3.3:1991638-1991657 | None:intergenic | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | + | chr3.3:1995889-1995908 | None:intergenic | 15.0% |
| !!! | TTTTAATGATTATGTTAACT+TGG | - | chr3.3:1991685-1991704 | MS.gene63671:CDS | 15.0% |
| !! | GATTTATAATTATGAAGATG+TGG | - | chr3.3:1997295-1997314 | MS.gene63671:CDS | 20.0% |
| !! | TATTATAAATAGAGAAGCTT+AGG | + | chr3.3:1995295-1995314 | None:intergenic | 20.0% |
| !! | TTCAAAAAAAAAAATGTAGC+TGG | - | chr3.3:1991642-1991661 | MS.gene63671:CDS | 20.0% |
| !! | TTCAACAATAAAATAGTCTT+TGG | - | chr3.3:1992994-1993013 | MS.gene63671:intron | 20.0% |
| !!! | AAATTTTTATGTTGGGAAAA+CGG | + | chr3.3:1992840-1992859 | None:intergenic | 20.0% |
| !!! | AATAAGTTGTTTTGAATAAG+CGG | + | chr3.3:1995683-1995702 | None:intergenic | 20.0% |
| !!! | ACCAGTTTTCATTTTAAATT+CGG | - | chr3.3:1994685-1994704 | MS.gene63671:intron | 20.0% |
| !!! | ATAAGCTATTTTGAATAAGT+TGG | + | chr3.3:1995741-1995760 | None:intergenic | 20.0% |
| !!! | ATATTAAAACCTGTATTGAT+CGG | + | chr3.3:1994872-1994891 | None:intergenic | 20.0% |
| !!! | TGATTATGATTTGATGATTA+TGG | + | chr3.3:1993550-1993569 | None:intergenic | 20.0% |
| ! | ACGAAGTATATGACTAATAT+AGG | + | chr3.3:1993386-1993405 | None:intergenic | 25.0% |
| ! | AGAAAGAAGAATAAGTTGTT+GGG | + | chr3.3:1995347-1995366 | None:intergenic | 25.0% |
| ! | AGTACTTTAATTGAGTAGTA+AGG | + | chr3.3:1992522-1992541 | None:intergenic | 25.0% |
| ! | AGTTATGATGAAAATACTAC+AGG | + | chr3.3:1994559-1994578 | None:intergenic | 25.0% |
| ! | ATAATCCATAGGATGATTAT+TGG | + | chr3.3:1994966-1994985 | None:intergenic | 25.0% |
| ! | CAGAGTAATTCAACTTTAAA+CGG | - | chr3.3:1992873-1992892 | MS.gene63671:intron | 25.0% |
| ! | CATCACATATCTACAAATAT+TGG | - | chr3.3:1993427-1993446 | MS.gene63671:intron | 25.0% |
| ! | CCAAGTGAAAAGAATTATTT+GGG | - | chr3.3:1995515-1995534 | MS.gene63671:intron | 25.0% |
| ! | CTTATTCGAAACAACTTATT+AGG | - | chr3.3:1995774-1995793 | MS.gene63671:intron | 25.0% |
| ! | GAGAATTATAATGAAGTTGT+CGG | + | chr3.3:1993078-1993097 | None:intergenic | 25.0% |
| ! | GATTTATAGAACTTGAGTTA+TGG | + | chr3.3:1994767-1994786 | None:intergenic | 25.0% |
| ! | GTTATGATGAAAATACTACA+GGG | + | chr3.3:1994558-1994577 | None:intergenic | 25.0% |
| ! | TAGAAAGAAGAATAAGTTGT+TGG | + | chr3.3:1995348-1995367 | None:intergenic | 25.0% |
| ! | TAGATTACATCTAACAAGTT+GGG | + | chr3.3:1995090-1995109 | None:intergenic | 25.0% |
| ! | TATTCTTCCCAAATCTATTT+AGG | - | chr3.3:1995321-1995340 | MS.gene63671:intron | 25.0% |
| ! | TTACTACTCAATTAAAGTAC+TGG | - | chr3.3:1992521-1992540 | MS.gene63671:intron | 25.0% |
| ! | TTAGATTACATCTAACAAGT+TGG | + | chr3.3:1995091-1995110 | None:intergenic | 25.0% |
| ! | TTTGACATGAAAATATGTTG+TGG | + | chr3.3:1994396-1994415 | None:intergenic | 25.0% |
| !! | AATTTTTATGTTGGGAAAAC+GGG | + | chr3.3:1992839-1992858 | None:intergenic | 25.0% |
| !! | ATTTTCACTTTCTTCATGTT+CGG | - | chr3.3:1991943-1991962 | MS.gene63671:CDS | 25.0% |
| !! | ATTTTGAATACCATTTAACC+TGG | + | chr3.3:1992596-1992615 | None:intergenic | 25.0% |
| !! | CAAATAATTCTTTTCACTTG+GGG | + | chr3.3:1995516-1995535 | None:intergenic | 25.0% |
| !! | CCAAATAATTCTTTTCACTT+GGG | + | chr3.3:1995517-1995536 | None:intergenic | 25.0% |
| !! | GAGATTTCAATTTTGAATTG+CGG | - | chr3.3:1997249-1997268 | MS.gene63671:CDS | 25.0% |
| !! | TATGTTAACTTGGAATTGTA+GGG | - | chr3.3:1991695-1991714 | MS.gene63671:CDS | 25.0% |
| !! | TCCGAATTTAAAATGAAAAC+TGG | + | chr3.3:1994689-1994708 | None:intergenic | 25.0% |
| !! | TTATGGGTATAGTAACTTTT+TGG | - | chr3.3:1992624-1992643 | MS.gene63671:intron | 25.0% |
| !! | TTATGTTAACTTGGAATTGT+AGG | - | chr3.3:1991694-1991713 | MS.gene63671:CDS | 25.0% |
| !!! | AAAAATTTTTGAGTGCTCTA+CGG | + | chr3.3:1991740-1991759 | None:intergenic | 25.0% |
| !!! | AAATGAAAACTGGTATTGAT+CGG | + | chr3.3:1994679-1994698 | None:intergenic | 25.0% |
| !!! | AATAAGCTGTTTTGAATAAG+CGG | + | chr3.3:1995816-1995835 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCTCTTGTTCTGA+AGG | + | chr3.3:1997446-1997465 | None:intergenic | 25.0% |
| !!! | TAATGACTGTAATTTGTTAG+AGG | - | chr3.3:1992186-1992205 | MS.gene63671:intron | 25.0% |
| !!! | TTTATCAAGAAGAGTGTTTA+TGG | - | chr3.3:1992689-1992708 | MS.gene63671:intron | 25.0% |
| AAAGTTTGTGGATCAAATCA+GGG | + | chr3.3:1992495-1992514 | None:intergenic | 30.0% | |
| AAGAATAGTGACACTAGTTA+GGG | + | chr3.3:1993363-1993382 | None:intergenic | 30.0% | |
| AAGTTACTATACCCATAATG+CGG | + | chr3.3:1992622-1992641 | None:intergenic | 30.0% | |
| AATTTAGAGAAAGATCTCCA+GGG | - | chr3.3:1992649-1992668 | MS.gene63671:intron | 30.0% | |
| AGATTACATCTAACAAGTTG+GGG | + | chr3.3:1995089-1995108 | None:intergenic | 30.0% | |
| ATAAATAGAGAAGCTTAGGT+TGG | + | chr3.3:1995291-1995310 | None:intergenic | 30.0% | |
| ATTCAAAATAGTCCGCATTA+TGG | - | chr3.3:1992607-1992626 | MS.gene63671:intron | 30.0% | |
| CAGGAAAAATAAAGTAGACT+TGG | - | chr3.3:1991761-1991780 | MS.gene63671:CDS | 30.0% | |
| CATCTTTAAATGAGTATGCA+TGG | - | chr3.3:1994038-1994057 | MS.gene63671:intron | 30.0% | |
| CCCAAGTGAAAAGAATTATT+TGG | - | chr3.3:1995514-1995533 | MS.gene63671:intron | 30.0% | |
| CTATAGGAACAAAGTTTACA+TGG | - | chr3.3:1992215-1992234 | MS.gene63671:intron | 30.0% | |
| CTTTAATTGAGTAGTAAGGT+TGG | + | chr3.3:1992518-1992537 | None:intergenic | 30.0% | |
| GAAAAATAAAGTAGACTTGG+TGG | - | chr3.3:1991764-1991783 | MS.gene63671:CDS | 30.0% | |
| GCATACTCATTTAAAGATGA+GGG | + | chr3.3:1994037-1994056 | None:intergenic | 30.0% | |
| GGCAAAAGTTATTATGCATA+AGG | - | chr3.3:1995433-1995452 | MS.gene63671:intron | 30.0% | |
| GTGTAGAAAGCAATTATGTT+GGG | + | chr3.3:1995494-1995513 | None:intergenic | 30.0% | |
| TAATTTAGAGAAAGATCTCC+AGG | - | chr3.3:1992648-1992667 | MS.gene63671:intron | 30.0% | |
| TACTTCCAATAATCATCCTA+TGG | - | chr3.3:1994958-1994977 | MS.gene63671:intron | 30.0% | |
| TCAAGTTTCACATAATCTCA+TGG | - | chr3.3:1994920-1994939 | MS.gene63671:intron | 30.0% | |
| TGAGCATAAATATACTCCTA+GGG | - | chr3.3:1993845-1993864 | MS.gene63671:intron | 30.0% | |
| TGCATACTCATTTAAAGATG+AGG | + | chr3.3:1994038-1994057 | None:intergenic | 30.0% | |
| TGTTGTTAAAGGAGAAAAAG+CGG | - | chr3.3:1997343-1997362 | MS.gene63671:CDS | 30.0% | |
| TTCAAAATAGTCCGCATTAT+GGG | - | chr3.3:1992608-1992627 | MS.gene63671:intron | 30.0% | |
| TTGAGCATAAATATACTCCT+AGG | - | chr3.3:1993844-1993863 | MS.gene63671:intron | 30.0% | |
| TTTATGAGACTATAGTGATG+AGG | + | chr3.3:1993028-1993047 | None:intergenic | 30.0% | |
| ! | ATCATCCTATGGATTATCTA+AGG | - | chr3.3:1994969-1994988 | MS.gene63671:intron | 30.0% |
| ! | ATCGGTACATAATTTGTCTT+AGG | + | chr3.3:1994661-1994680 | None:intergenic | 30.0% |
| ! | ATGTTAACTTGGAATTGTAG+GGG | - | chr3.3:1991696-1991715 | MS.gene63671:CDS | 30.0% |
| ! | ATTTTTATGTTGGGAAAACG+GGG | + | chr3.3:1992838-1992857 | None:intergenic | 30.0% |
| ! | CCCAAATAATTCTTTTCACT+TGG | + | chr3.3:1995518-1995537 | None:intergenic | 30.0% |
| ! | GAGCACTCAAAAATTTTTAC+AGG | - | chr3.3:1991742-1991761 | MS.gene63671:CDS | 30.0% |
| ! | GATGCTCTAATTTTTCTGAT+TGG | - | chr3.3:1992161-1992180 | MS.gene63671:intron | 30.0% |
| ! | TAGGTCACAGTGAATTTTTA+TGG | + | chr3.3:1994729-1994748 | None:intergenic | 30.0% |
| ! | TTTTCACTTTCTTCATGTTC+GGG | - | chr3.3:1991944-1991963 | MS.gene63671:CDS | 30.0% |
| !! | CCTTTGGAAATATTTTCAAG+CGG | - | chr3.3:1992554-1992573 | MS.gene63671:intron | 30.0% |
| !! | GATTATTGGAAGTAGTTTTG+AGG | + | chr3.3:1994952-1994971 | None:intergenic | 30.0% |
| !! | TATTTACTTTCTGAAGCTAG+AGG | - | chr3.3:1991855-1991874 | MS.gene63671:intron | 30.0% |
| !! | TCAATTAAAGTACTGGAATC+AGG | - | chr3.3:1992528-1992547 | MS.gene63671:intron | 30.0% |
| !!! | CAATTTTGTTAGCTTTCTAG+TGG | + | chr3.3:1994617-1994636 | None:intergenic | 30.0% |
| AAACACAAACGTTGTAGGTA+TGG | + | chr3.3:1994828-1994847 | None:intergenic | 35.0% | |
| AAACAGCTTATTCGATTCCT+AGG | - | chr3.3:1997131-1997150 | MS.gene63671:CDS | 35.0% | |
| AAAGAATCACTAAAGGGTGA+TGG | + | chr3.3:1992366-1992385 | None:intergenic | 35.0% | |
| AAATCACCCATCATTATCCA+GGG | + | chr3.3:1992086-1992105 | None:intergenic | 35.0% | |
| AAGAGAAAAGTCAAGAGAAG+AGG | + | chr3.3:1995210-1995229 | None:intergenic | 35.0% | |
| ACACATACCTCAGAAGAATA+GGG | + | chr3.3:1997187-1997206 | None:intergenic | 35.0% | |
| ACAGACCTTAGATAATCCAT+AGG | + | chr3.3:1994977-1994996 | None:intergenic | 35.0% | |
| ACTCTTTCAAGAACCTTCAA+TGG | + | chr3.3:1997371-1997390 | None:intergenic | 35.0% | |
| ATGATGAAAATACTACAGGG+AGG | + | chr3.3:1994555-1994574 | None:intergenic | 35.0% | |
| ATTACTAGTACTAGTGTGAG+TGG | + | chr3.3:1995386-1995405 | None:intergenic | 35.0% | |
| CCGCTTGAAAATATTTCCAA+AGG | + | chr3.3:1992557-1992576 | None:intergenic | 35.0% | |
| CCTCAGAAAGAATCACTAAA+GGG | + | chr3.3:1992372-1992391 | None:intergenic | 35.0% | |
| CCTTAGAGTAATTCCTGAAT+CGG | - | chr3.3:1995154-1995173 | MS.gene63671:intron | 35.0% | |
| CCTTTAGTGATTCTTTCTGA+GGG | - | chr3.3:1992370-1992389 | MS.gene63671:intron | 35.0% | |
| CGAGTAGTGATGAAAAAAAG+GGG | - | chr3.3:1992117-1992136 | MS.gene63671:intron | 35.0% | |
| CTTAGCATCTTGACAACATA+TGG | - | chr3.3:1994207-1994226 | MS.gene63671:intron | 35.0% | |
| GAAAGTTTGTGGATCAAATC+AGG | + | chr3.3:1992496-1992515 | None:intergenic | 35.0% | |
| GAACAAAGTTTACATGGAGA+GGG | - | chr3.3:1992221-1992240 | MS.gene63671:intron | 35.0% | |
| GAAGAATAGTGACACTAGTT+AGG | + | chr3.3:1993364-1993383 | None:intergenic | 35.0% | |
| GAGGTCTTAGCAAAATTGTA+CGG | + | chr3.3:1994536-1994555 | None:intergenic | 35.0% | |
| GAGTAGTGATGAAAAAAAGG+GGG | - | chr3.3:1992118-1992137 | MS.gene63671:intron | 35.0% | |
| GCGAGTAGTGATGAAAAAAA+GGG | - | chr3.3:1992116-1992135 | MS.gene63671:intron | 35.0% | |
| GGTGTAGAAAGCAATTATGT+TGG | + | chr3.3:1995495-1995514 | None:intergenic | 35.0% | |
| GTGTAGAAAGCAATTATGCA+CGG | + | chr3.3:1995472-1995491 | None:intergenic | 35.0% | |
| TAAAATAGTCTTTGGCACCA+AGG | - | chr3.3:1993002-1993021 | MS.gene63671:intron | 35.0% | |
| TAGTAAGGTTGGAAAGTTTG+TGG | + | chr3.3:1992507-1992526 | None:intergenic | 35.0% | |
| TATACCACTGTAAGTAACCA+AGG | + | chr3.3:1991990-1992009 | None:intergenic | 35.0% | |
| TCATGAAATGCAAATGCATG+TGG | - | chr3.3:1993787-1993806 | MS.gene63671:intron | 35.0% | |
| TGATATCTTTCCAGTAGCTT+TGG | + | chr3.3:1994419-1994438 | None:intergenic | 35.0% | |
| TGATCGTGTTCTTTGTAATG+TGG | - | chr3.3:1992282-1992301 | MS.gene63671:intron | 35.0% | |
| TGCGAGTAGTGATGAAAAAA+AGG | - | chr3.3:1992115-1992134 | MS.gene63671:intron | 35.0% | |
| TGTTGGGCCTAAATAGATTT+GGG | + | chr3.3:1995331-1995350 | None:intergenic | 35.0% | |
| TTGTTAGAGGTTCACACTAT+AGG | - | chr3.3:1992199-1992218 | MS.gene63671:intron | 35.0% | |
| TTGTTGGGCCTAAATAGATT+TGG | + | chr3.3:1995332-1995351 | None:intergenic | 35.0% | |
| ! | CTTTTCCAAAAAGCGGTTTA+GGG | - | chr3.3:1995255-1995274 | MS.gene63671:intron | 35.0% |
| ! | TACTGATTGCAAATCTCACA+AGG | - | chr3.3:1997319-1997338 | MS.gene63671:CDS | 35.0% |
| ! | TCTCACAAGGTTGTTGTTAA+AGG | - | chr3.3:1997332-1997351 | MS.gene63671:CDS | 35.0% |
| ! | TCTTTTCCAAAAAGCGGTTT+AGG | - | chr3.3:1995254-1995273 | MS.gene63671:intron | 35.0% |
| ! | TTCTCCTCTTTTCCAAAAAG+CGG | - | chr3.3:1995248-1995267 | MS.gene63671:intron | 35.0% |
| !!! | TAAACCGCTTTTTGGAAAAG+AGG | + | chr3.3:1995255-1995274 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTAGTAGACTAG+TGG | - | chr3.3:1992450-1992469 | MS.gene63671:intron | 35.0% |
| !!! | TTTTTCTCTTGTTCTGAAGG+TGG | + | chr3.3:1997443-1997462 | None:intergenic | 35.0% |
| AAGATCTTGTCCTTGAGAGA+TGG | - | chr3.3:1992802-1992821 | MS.gene63671:intron | 40.0% | |
| AATGCATGTGGTACCATTCT+AGG | - | chr3.3:1993799-1993818 | MS.gene63671:intron | 40.0% | |
| AGAAAAAGCGGATCCATTGA+AGG | - | chr3.3:1997355-1997374 | MS.gene63671:CDS | 40.0% | |
| AGAGAAGAGGAGAATACCTT+AGG | + | chr3.3:1995197-1995216 | None:intergenic | 40.0% | |
| AGATCATCCCTATTCTTCTG+AGG | - | chr3.3:1997177-1997196 | MS.gene63671:CDS | 40.0% | |
| AGGTTCTTGAAAGAGTTCAG+AGG | - | chr3.3:1997375-1997394 | MS.gene63671:CDS | 40.0% | |
| AGTAATTCAAAACCTCGCAG+CGG | - | chr3.3:1992965-1992984 | MS.gene63671:intron | 40.0% | |
| ATGCATGTGGTACCATTCTA+GGG | - | chr3.3:1993800-1993819 | MS.gene63671:intron | 40.0% | |
| ATGGTCAAATTGCTGCACAT+AGG | + | chr3.3:1994748-1994767 | None:intergenic | 40.0% | |
| CACACATACCTCAGAAGAAT+AGG | + | chr3.3:1997188-1997207 | None:intergenic | 40.0% | |
| CCCTCAGAAAGAATCACTAA+AGG | + | chr3.3:1992373-1992392 | None:intergenic | 40.0% | |
| CCCTTTAGTGATTCTTTCTG+AGG | - | chr3.3:1992369-1992388 | MS.gene63671:intron | 40.0% | |
| CCGATTCAGGAATTACTCTA+AGG | + | chr3.3:1995157-1995176 | None:intergenic | 40.0% | |
| CGGAGAACTATTAAGAGCTT+GGG | - | chr3.3:1991822-1991841 | MS.gene63671:intron | 40.0% | |
| GAAATCACCCATCATTATCC+AGG | + | chr3.3:1992087-1992106 | None:intergenic | 40.0% | |
| GATGATCTGCAATTCCGTTT+GGG | + | chr3.3:1997165-1997184 | None:intergenic | 40.0% | |
| GGAACAAAGTTTACATGGAG+AGG | - | chr3.3:1992220-1992239 | MS.gene63671:intron | 40.0% | |
| GGAAGAAAAGAAAGCTGAAG+AGG | - | chr3.3:1997493-1997512 | MS.gene63671:intron | 40.0% | |
| GGTGTAAACACAAACGTTGT+AGG | + | chr3.3:1994833-1994852 | None:intergenic | 40.0% | |
| GTGTTCTTTGTAATGTGGCT+TGG | - | chr3.3:1992287-1992306 | MS.gene63671:intron | 40.0% | |
| TACTGGAATCAGGATACCTT+TGG | - | chr3.3:1992538-1992557 | MS.gene63671:intron | 40.0% | |
| TCATGTCAAACCAAAGCTAC+TGG | - | chr3.3:1994406-1994425 | MS.gene63671:intron | 40.0% | |
| TCGGAGAACTATTAAGAGCT+TGG | - | chr3.3:1991821-1991840 | MS.gene63671:intron | 40.0% | |
| TGATGGTCTGATTGAACTCT+GGG | + | chr3.3:1992349-1992368 | None:intergenic | 40.0% | |
| TGGCGTCTTAAATTCCATGA+AGG | - | chr3.3:1992307-1992326 | MS.gene63671:intron | 40.0% | |
| TGTTACAGTACCATCTCTCA+AGG | + | chr3.3:1992815-1992834 | None:intergenic | 40.0% | |
| TTAGGTGCTCTGATACGTAA+CGG | + | chr3.3:1993148-1993167 | None:intergenic | 40.0% | |
| TTTGAATGTTGCCCTTACGT+TGG | + | chr3.3:1993227-1993246 | None:intergenic | 40.0% | |
| ! | AATTACGCACCGATCAATAC+AGG | - | chr3.3:1994860-1994879 | MS.gene63671:intron | 40.0% |
| ! | AGCAGCGTTCTTATTTCCTA+AGG | - | chr3.3:1995178-1995197 | MS.gene63671:intron | 40.0% |
| ! | AGTACTAGTGTGAGTGGATT+TGG | + | chr3.3:1995380-1995399 | None:intergenic | 40.0% |
| ! | GTACTAGTGTGAGTGGATTT+GGG | + | chr3.3:1995379-1995398 | None:intergenic | 40.0% |
| ! | TACTAGTGTGAGTGGATTTG+GGG | + | chr3.3:1995378-1995397 | None:intergenic | 40.0% |
| ! | TCAGCTTTCTTTTCTTCCTC+TGG | + | chr3.3:1997491-1997510 | None:intergenic | 40.0% |
| ! | TGTATTGATCGGTGCGTAAT+TGG | + | chr3.3:1994861-1994880 | None:intergenic | 40.0% |
| !! | CAGGAATTACTCTAAGGTGA+GGG | + | chr3.3:1995151-1995170 | None:intergenic | 40.0% |
| !! | CGCAATCAATGGATTACTGA+TGG | - | chr3.3:1992724-1992743 | MS.gene63671:intron | 40.0% |
| !! | GATATGGTTGCTTTGGAACA+AGG | - | chr3.3:1991890-1991909 | MS.gene63671:intron | 40.0% |
| !! | GTTTACCCTAAACCGCTTTT+TGG | + | chr3.3:1995263-1995282 | None:intergenic | 40.0% |
| !! | TCAGGAATTACTCTAAGGTG+AGG | + | chr3.3:1995152-1995171 | None:intergenic | 40.0% |
| !! | TGTTAGCTTTCTAATGCCGT+TGG | + | chr3.3:1994804-1994823 | None:intergenic | 40.0% |
| !! | TGTTAGCTTTCTAGTGGCTT+TGG | + | chr3.3:1994611-1994630 | None:intergenic | 40.0% |
| !! | TTCTTTTCTTCCTCTGGCTT+AGG | + | chr3.3:1997485-1997504 | None:intergenic | 40.0% |
| !!! | CTTGTTCTGAAGGTGGTTTT+GGG | + | chr3.3:1997436-1997455 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGAAGGTGGTTT+TGG | + | chr3.3:1997437-1997456 | None:intergenic | 40.0% |
| AAGCTAGAGGTTTCTCCGAA+GGG | - | chr3.3:1991868-1991887 | MS.gene63671:intron | 45.0% | |
| AAGGGCAACATTCAAACAGG+AGG | - | chr3.3:1993231-1993250 | MS.gene63671:intron | 45.0% | |
| AGAATGAGAGACGTGATGCT+TGG | - | chr3.3:1992024-1992043 | MS.gene63671:intron | 45.0% | |
| AGACTATAGTGATGAGGCCT+TGG | + | chr3.3:1993022-1993041 | None:intergenic | 45.0% | |
| AGGGCAACATTCAAACAGGA+GGG | - | chr3.3:1993232-1993251 | MS.gene63671:intron | 45.0% | |
| AGTGGTATATGCTAGTCCAC+GGG | - | chr3.3:1992001-1992020 | MS.gene63671:intron | 45.0% | |
| ATTCCATGAAGGTTTCGCCA+AGG | - | chr3.3:1992318-1992337 | MS.gene63671:intron | 45.0% | |
| CAAGAGCCCTGGATAATGAT+GGG | - | chr3.3:1992077-1992096 | MS.gene63671:intron | 45.0% | |
| CAGTGGTATATGCTAGTCCA+CGG | - | chr3.3:1992000-1992019 | MS.gene63671:intron | 45.0% | |
| CCAAAGCAACCATATCCCTT+CGG | + | chr3.3:1991886-1991905 | None:intergenic | 45.0% | |
| CGTAAGGGCAACATTCAAAC+AGG | - | chr3.3:1993228-1993247 | MS.gene63671:intron | 45.0% | |
| CTAGTAGTATTCAAGAGCCC+TGG | - | chr3.3:1992066-1992085 | MS.gene63671:intron | 45.0% | |
| CTCACAACAAAAGCTAGTCC+TGG | - | chr3.3:1993187-1993206 | MS.gene63671:intron | 45.0% | |
| GAAAGAGAAACCTAAGCCAG+AGG | - | chr3.3:1997472-1997491 | MS.gene63671:intron | 45.0% | |
| GAAAGATCTCCAGGGTCAAT+TGG | - | chr3.3:1992657-1992676 | MS.gene63671:intron | 45.0% | |
| GAGCTCTTAGCCAGGTTAAA+TGG | - | chr3.3:1992583-1992602 | MS.gene63671:intron | 45.0% | |
| GCAATTATGCACGGTGCATA+AGG | + | chr3.3:1995463-1995482 | None:intergenic | 45.0% | |
| GCAGGTGACTGTTATTCAAG+AGG | - | chr3.3:1991920-1991939 | MS.gene63671:intron | 45.0% | |
| GCGTAATTTCCAATTGACCC+TGG | + | chr3.3:1992669-1992688 | None:intergenic | 45.0% | |
| GGATCCTTGGTTACTTACAG+TGG | - | chr3.3:1991983-1992002 | MS.gene63671:intron | 45.0% | |
| GGATGATCTGCAATTCCGTT+TGG | + | chr3.3:1997166-1997185 | None:intergenic | 45.0% | |
| GTAGACTAGTGGCAGAGAAT+TGG | - | chr3.3:1992461-1992480 | MS.gene63671:intron | 45.0% | |
| GTGATGGTCTGATTGAACTC+TGG | + | chr3.3:1992350-1992369 | None:intergenic | 45.0% | |
| GTTGTAGTGGTATGACTGCT+CGG | - | chr3.3:1991802-1991821 | MS.gene63671:CDS | 45.0% | |
| TAGGTGCTCTGATACGTAAC+GGG | + | chr3.3:1993147-1993166 | None:intergenic | 45.0% | |
| TCAAGAGCCCTGGATAATGA+TGG | - | chr3.3:1992076-1992095 | MS.gene63671:intron | 45.0% | |
| TTCACGATCAGGTATGTAGC+TGG | - | chr3.3:1991611-1991630 | MS.gene63671:CDS | 45.0% | |
| TTGCTCAACCACGATGATGA+GGG | + | chr3.3:1993877-1993896 | None:intergenic | 45.0% | |
| TTTATGCTCAACCACGACGA+TGG | + | chr3.3:1993835-1993854 | None:intergenic | 45.0% | |
| TTTGCTCAACCACGATGATG+AGG | + | chr3.3:1993878-1993897 | None:intergenic | 45.0% | |
| ! | ACTAGTGTGAGTGGATTTGG+GGG | + | chr3.3:1995377-1995396 | None:intergenic | 45.0% |
| ! | TCTGCAATTCCGTTTGGGAT+CGG | + | chr3.3:1997160-1997179 | None:intergenic | 45.0% |
| ! | TTGAACTCTGGGAATGACCT+TGG | + | chr3.3:1992338-1992357 | None:intergenic | 45.0% |
| !! | ATCGGTGCGTAATTGGTCTT+AGG | + | chr3.3:1994854-1994873 | None:intergenic | 45.0% |
| !! | TCGTTTTGACGTGAGACCAA+CGG | - | chr3.3:1994785-1994804 | MS.gene63671:intron | 45.0% |
| !! | TTTCAGGTTTGAGTCTGCGT+GGG | - | chr3.3:1992420-1992439 | MS.gene63671:intron | 45.0% |
| !!! | TCTGAAGGTGGTTTTGGGAT+CGG | + | chr3.3:1997431-1997450 | None:intergenic | 45.0% |
| !! | AAAACAAATAAAAATAAAAA+AGG | + | chr3.3:1991669-1991688 | None:intergenic | 5.0% |
| !! | AAGAAAAAAAAATTATAATA+TGG | + | chr3.3:1995581-1995600 | None:intergenic | 5.0% |
| !! | AGAAAAAAAAATTATAATAT+GGG | + | chr3.3:1995580-1995599 | None:intergenic | 5.0% |
| AAGAGAGGGACATGGATCCT+TGG | - | chr3.3:1991970-1991989 | MS.gene63671:intron | 50.0% | |
| ATGATGAGGGCTTATGCCCT+AGG | + | chr3.3:1993864-1993883 | None:intergenic | 50.0% | |
| ATGCTCAACCACGACGATGA+GGG | + | chr3.3:1993832-1993851 | None:intergenic | 50.0% | |
| CACGCAGACTCAAACCTGAA+AGG | + | chr3.3:1992421-1992440 | None:intergenic | 50.0% | |
| CCGAAGGGATATGGTTGCTT+TGG | - | chr3.3:1991883-1991902 | MS.gene63671:intron | 50.0% | |
| CTGTCATGCCCATTCCACTT+TGG | + | chr3.3:1992247-1992266 | None:intergenic | 50.0% | |
| GAAGCTAGAGGTTTCTCCGA+AGG | - | chr3.3:1991867-1991886 | MS.gene63671:intron | 50.0% | |
| GAGCAAAAGCTTCATCGTCG+TGG | - | chr3.3:1993891-1993910 | MS.gene63671:intron | 50.0% | |
| GAGGTTTCTCCGAAGGGATA+TGG | - | chr3.3:1991874-1991893 | MS.gene63671:intron | 50.0% | |
| GCAGTCATACCACTACAACG+AGG | + | chr3.3:1991801-1991820 | None:intergenic | 50.0% | |
| GGAAGAAAGAGCTCTTAGCC+AGG | - | chr3.3:1992575-1992594 | MS.gene63671:intron | 50.0% | |
| GGGCAACATTCAAACAGGAG+GGG | - | chr3.3:1993233-1993252 | MS.gene63671:intron | 50.0% | |
| GTGGTTGAGCAAAAGCTCCA+GGG | - | chr3.3:1993910-1993929 | MS.gene63671:intron | 50.0% | |
| GTTGAACTAATTCCGCTGCG+AGG | + | chr3.3:1992980-1992999 | None:intergenic | 50.0% | |
| TATGCTCAACCACGACGATG+AGG | + | chr3.3:1993833-1993852 | None:intergenic | 50.0% | |
| TCATGTTCGGGTGCAAGAGA+GGG | - | chr3.3:1991956-1991975 | MS.gene63671:CDS | 50.0% | |
| TCCAGAAGTCGCGCAATCAA+TGG | - | chr3.3:1992713-1992732 | MS.gene63671:intron | 50.0% | |
| TGACCTTGGCGAAACCTTCA+TGG | + | chr3.3:1992324-1992343 | None:intergenic | 50.0% | |
| TGAGGGCTTATGCCCTAGAA+TGG | + | chr3.3:1993815-1993834 | None:intergenic | 50.0% | |
| TGCCTTACAGTGGAGGAGTT+CGG | - | chr3.3:1992395-1992414 | MS.gene63671:intron | 50.0% | |
| TTACATGGAGAGGGCCAAAG+TGG | - | chr3.3:1992230-1992249 | MS.gene63671:intron | 50.0% | |
| TTCATGTTCGGGTGCAAGAG+AGG | - | chr3.3:1991955-1991974 | MS.gene63671:CDS | 50.0% | |
| TTGCTCAACCACGACGATGA+GGG | + | chr3.3:1993902-1993921 | None:intergenic | 50.0% | |
| TTGGAACAAGGCGAACTTGC+AGG | - | chr3.3:1991902-1991921 | MS.gene63671:intron | 50.0% | |
| TTTGCTCAACCACGACGATG+AGG | + | chr3.3:1993903-1993922 | None:intergenic | 50.0% | |
| ! | AAAAAAAGGGGGTGCGTCAG+TGG | - | chr3.3:1992129-1992148 | MS.gene63671:intron | 50.0% |
| ! | CTTTTGCTCAACCACGACGA+TGG | + | chr3.3:1993905-1993924 | None:intergenic | 50.0% |
| ! | TCAGAGCACCTAAGACGACA+CGG | - | chr3.3:1993155-1993174 | MS.gene63671:intron | 50.0% |
| ! | TCCATTGATTGCGCGACTTC+TGG | + | chr3.3:1992717-1992736 | None:intergenic | 50.0% |
| ! | TGCTCTGATACGTAACGGGA+TGG | + | chr3.3:1993143-1993162 | None:intergenic | 50.0% |
| !! | CTTTCAGGTTTGAGTCTGCG+TGG | - | chr3.3:1992419-1992438 | MS.gene63671:intron | 50.0% |
| !! | TGGAATTGTAGGGGTGCTCA+AGG | - | chr3.3:1991705-1991724 | MS.gene63671:CDS | 50.0% |
| AAAGATGAGGGCTCATGCCC+TGG | + | chr3.3:1994025-1994044 | None:intergenic | 55.0% | |
| AATCTCCGCCGTGTCGTCTT+AGG | + | chr3.3:1993166-1993185 | None:intergenic | 55.0% | |
| ACCTGCGCGTTACCAACGTA+AGG | - | chr3.3:1993212-1993231 | MS.gene63671:intron | 55.0% | |
| ACGATGAGGGCTTATGCCCT+AGG | + | chr3.3:1993819-1993838 | None:intergenic | 55.0% | |
| CCTGCGCGTTACCAACGTAA+GGG | - | chr3.3:1993213-1993232 | MS.gene63671:intron | 55.0% | |
| CGTGGTTGAGCAAAAGCTCC+AGG | - | chr3.3:1993909-1993928 | MS.gene63671:intron | 55.0% | |
| CTGCAAGAGCCTCGTTGTAG+TGG | - | chr3.3:1991789-1991808 | MS.gene63671:CDS | 55.0% | |
| GAGCAAAAGCTCCATCGTCG+TGG | - | chr3.3:1993916-1993935 | MS.gene63671:intron | 55.0% | |
| GGAGAGGGCCAAAGTGGAAT+GGG | - | chr3.3:1992236-1992255 | MS.gene63671:intron | 55.0% | |
| GGCATAAGCCCTCATCATCG+TGG | - | chr3.3:1993866-1993885 | MS.gene63671:intron | 55.0% | |
| TCACGTCTCTCATTCTCCCG+TGG | + | chr3.3:1992020-1992039 | None:intergenic | 55.0% | |
| TGGAGAGGGCCAAAGTGGAA+TGG | - | chr3.3:1992235-1992254 | MS.gene63671:intron | 55.0% | |
| ! | TCTGAGGGTGTGCCTTACAG+TGG | - | chr3.3:1992385-1992404 | MS.gene63671:intron | 55.0% |
| !! | AAGAACGCTGCTGCCGATTC+AGG | + | chr3.3:1995170-1995189 | None:intergenic | 55.0% |
| !! | TTGGTAACGCGCAGGTAACC+AGG | + | chr3.3:1993208-1993227 | None:intergenic | 55.0% |
| CCTAGGTCGCCGATCCCAAA+CGG | - | chr3.3:1997148-1997167 | MS.gene63671:CDS | 60.0% | |
| GAGCACCTAAGACGACACGG+CGG | - | chr3.3:1993158-1993177 | MS.gene63671:intron | 60.0% | |
| GGCATAAGCCCTCATCGTCG+TGG | - | chr3.3:1993821-1993840 | MS.gene63671:intron | 60.0% | |
| GGCCGAACTCCTCCACTGTA+AGG | + | chr3.3:1992400-1992419 | None:intergenic | 60.0% | |
| GTGGAGGAGTTCGGCCTTTC+AGG | - | chr3.3:1992404-1992423 | MS.gene63671:intron | 60.0% | |
| TCGGGTGCAAGAGAGGGACA+TGG | - | chr3.3:1991962-1991981 | MS.gene63671:intron | 60.0% | |
| ! | GAGGGTGTGCCTTACAGTGG+AGG | - | chr3.3:1992388-1992407 | MS.gene63671:intron | 60.0% |
| !! | CCCTTACGTTGGTAACGCGC+AGG | + | chr3.3:1993216-1993235 | None:intergenic | 60.0% |
| ! | CCGTTTGGGATCGGCGACCT+AGG | + | chr3.3:1997151-1997170 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1991605 | 1997523 | 1991605 | ID=MS.gene63671 |
| chr3.3 | mRNA | 1991605 | 1997523 | 1991605 | ID=MS.gene63671.t1;Parent=MS.gene63671 |
| chr3.3 | exon | 1997507 | 1997523 | 1997507 | ID=MS.gene63671.t1.exon1;Parent=MS.gene63671.t1 |
| chr3.3 | CDS | 1997507 | 1997523 | 1997507 | ID=cds.MS.gene63671.t1;Parent=MS.gene63671.t1 |
| chr3.3 | exon | 1996989 | 1997412 | 1996989 | ID=MS.gene63671.t1.exon2;Parent=MS.gene63671.t1 |
| chr3.3 | CDS | 1996989 | 1997412 | 1996989 | ID=cds.MS.gene63671.t1;Parent=MS.gene63671.t1 |
| chr3.3 | exon | 1996532 | 1996920 | 1996532 | ID=MS.gene63671.t1.exon3;Parent=MS.gene63671.t1 |
| chr3.3 | CDS | 1996532 | 1996920 | 1996532 | ID=cds.MS.gene63671.t1;Parent=MS.gene63671.t1 |
| chr3.3 | exon | 1991930 | 1991975 | 1991930 | ID=MS.gene63671.t1.exon4;Parent=MS.gene63671.t1 |
| chr3.3 | CDS | 1991930 | 1991975 | 1991930 | ID=cds.MS.gene63671.t1;Parent=MS.gene63671.t1 |
| chr3.3 | exon | 1991605 | 1991832 | 1991605 | ID=MS.gene63671.t1.exon5;Parent=MS.gene63671.t1 |
| chr3.3 | CDS | 1991605 | 1991832 | 1991605 | ID=cds.MS.gene63671.t1;Parent=MS.gene63671.t1 |
| Gene Sequence |
| Protein sequence |
