Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63836.t1 | XP_003617666.2 | 99 | 418 | 4 | 0 | 1 | 418 | 1 | 418 | 4.20E-222 | 780.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63836.t1 | Q42545 | 78.3 | 419 | 78 | 5 | 8 | 418 | 20 | 433 | 7.8e-169 | 594.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63836.t1 | Q5JZT9 | 99.0 | 418 | 4 | 0 | 1 | 418 | 1 | 418 | 3.0e-222 | 780.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049491 | MS.gene63836 | 0.803126 | 4.04E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene63836 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene63836 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene055390 | MS.gene63836 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene63836 | 0.803142 | 4.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63836.t1 | MTR_5g094120 | 99.043 | 418 | 4 | 0 | 1 | 418 | 1 | 418 | 0.0 | 833 |
| MS.gene63836.t1 | MTR_3g055590 | 84.185 | 411 | 62 | 3 | 9 | 418 | 5 | 413 | 0.0 | 614 |
| MS.gene63836.t1 | MTR_1g060010 | 58.446 | 296 | 121 | 1 | 72 | 365 | 135 | 430 | 6.51e-111 | 334 |
| MS.gene63836.t1 | MTR_7g104500 | 58.644 | 295 | 120 | 1 | 73 | 365 | 149 | 443 | 1.01e-110 | 333 |
| MS.gene63836.t1 | MTR_7g104500 | 58.644 | 295 | 120 | 1 | 73 | 365 | 149 | 443 | 3.05e-110 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63836.t1 | AT5G55280 | 85.445 | 371 | 51 | 2 | 50 | 418 | 64 | 433 | 0.0 | 576 |
| MS.gene63836.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 1.38e-114 | 343 |
| MS.gene63836.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 1.38e-114 | 343 |
| MS.gene63836.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 1.38e-114 | 343 |
| MS.gene63836.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 36 | 345 | 1.15e-112 | 336 |
| MS.gene63836.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.64e-112 | 337 |
| MS.gene63836.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.64e-112 | 337 |
| MS.gene63836.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.64e-112 | 337 |
| MS.gene63836.t1 | AT3G52750 | 62.009 | 229 | 85 | 1 | 58 | 284 | 113 | 341 | 1.22e-81 | 255 |
Find 107 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTGCCAATATTATATT+TGG | 0.100420 | 5.1:-75187210 | MS.gene63836:CDS |
| ACACCAAATCTGATCCTTTA+AGG | 0.168325 | 5.1:+75189846 | None:intergenic |
| GCTACTTTGGCTCCTTTAAT+TGG | 0.187864 | 5.1:-75187809 | MS.gene63836:CDS |
| GCTGAAAACCCTATTAAAAT+TGG | 0.229125 | 5.1:-75190071 | MS.gene63836:CDS |
| TACTGGCGGGAATCCACTTT+TGG | 0.236726 | 5.1:-75189912 | MS.gene63836:CDS |
| CAACGTTTCACACGTCGTTT+TGG | 0.236894 | 5.1:-75191171 | MS.gene63836:CDS |
| CATGATTGGTAGTGGTTTAC+AGG | 0.255127 | 5.1:-75191061 | MS.gene63836:intron |
| TGAATAGATGATCCAATTAA+AGG | 0.273013 | 5.1:+75187797 | None:intergenic |
| GCTATTGCTGATGCCCTTAA+AGG | 0.286692 | 5.1:-75189860 | MS.gene63836:CDS |
| AAGATTAAGGTCGTTGGAAT+TGG | 0.290511 | 5.1:-75191111 | MS.gene63836:CDS |
| TGTTGATAACGCTAAGATTA+AGG | 0.323415 | 5.1:-75191124 | MS.gene63836:CDS |
| TTCATAACAGCTGGGATGGG+TGG | 0.331608 | 5.1:-75189824 | MS.gene63836:CDS |
| AGATTAAGGTCGTTGGAATT+GGG | 0.354685 | 5.1:-75191110 | MS.gene63836:CDS |
| AACAGCTCCAAATATAATAT+TGG | 0.367048 | 5.1:+75187203 | None:intergenic |
| GGGGTGGTGTATAATATTAC+TGG | 0.374863 | 5.1:-75187764 | MS.gene63836:CDS |
| TTTGATATTTGAGCCACAAC+TGG | 0.375367 | 5.1:+75189779 | None:intergenic |
| GAGCTTCTGACTCGTGGATT+AGG | 0.377707 | 5.1:-75190047 | MS.gene63836:intron |
| GAATGTGAGAGAAGCTTGTT+TGG | 0.378996 | 5.1:+75191255 | None:intergenic |
| TTTACAGGTTGTGACTAGTT+TGG | 0.382264 | 5.1:-75187238 | MS.gene63836:intron |
| AGCAGAAGAAGCAGCAGAAC+AGG | 0.382305 | 5.1:-75187831 | MS.gene63836:CDS |
| ACGTGTGAAACGTTGCGTTT+TGG | 0.386570 | 5.1:+75191179 | None:intergenic |
| TGCCCTTAAAGGATCAGATT+TGG | 0.410169 | 5.1:-75189849 | MS.gene63836:CDS |
| TTACCCTGCAGGAAGTCAAC+AGG | 0.422777 | 5.1:-75187730 | MS.gene63836:CDS |
| ACTACCAATCATGCGGTTAA+CGG | 0.432044 | 5.1:+75191071 | None:intergenic |
| AGCAGCAGAACAGGCTACTT+TGG | 0.434800 | 5.1:-75187822 | MS.gene63836:CDS |
| GATTTGGTGTTCATAACAGC+TGG | 0.436980 | 5.1:-75189833 | MS.gene63836:CDS |
| TGACGAGCAGATGCCACTCC+AGG | 0.440624 | 5.1:-75189483 | MS.gene63836:CDS |
| TCATAACAGCTGGGATGGGT+GGG | 0.443818 | 5.1:-75189823 | MS.gene63836:CDS |
| CATAACAGCTGGGATGGGTG+GGG | 0.445201 | 5.1:-75189822 | MS.gene63836:CDS |
| TCAAGAAGCTTAGCAGCCCT+TGG | 0.447912 | 5.1:+75187093 | None:intergenic |
| TGTGTGTTCTTTCAGATACC+TGG | 0.451298 | 5.1:-75187947 | MS.gene63836:intron |
| AGCCACAACTGGGGCAGCAC+CGG | 0.454881 | 5.1:+75189790 | None:intergenic |
| CTGAAATTCCCTGAACTCCT+TGG | 0.456416 | 5.1:+75189429 | None:intergenic |
| ATGTCAAGAAGACGATCATT+TGG | 0.457004 | 5.1:+75189509 | None:intergenic |
| CTGCAAGACGAAAAGCATCC+TGG | 0.457577 | 5.1:+75189465 | None:intergenic |
| CACCAAATCTGATCCTTTAA+GGG | 0.462114 | 5.1:+75189847 | None:intergenic |
| AATGCCGTTAACCGCATGAT+TGG | 0.465096 | 5.1:-75191075 | MS.gene63836:CDS |
| AGGACGTAAAAGATCCTTGC+AGG | 0.466429 | 5.1:-75189705 | MS.gene63836:intron |
| TTTGAGGACTTGAGGGGAGC+GGG | 0.475415 | 5.1:+75187036 | None:intergenic |
| GGAAGTCAACAGGGTATCTC+AGG | 0.480783 | 5.1:-75187720 | MS.gene63836:intron |
| GTTCTGCTGCTTCTTCTGCT+CGG | 0.482688 | 5.1:+75187834 | None:intergenic |
| AGATAAGTTTGAGGACTTGA+GGG | 0.484578 | 5.1:+75187029 | None:intergenic |
| GCAGCTTGTTCGCCCAAAAG+TGG | 0.485411 | 5.1:+75189899 | None:intergenic |
| AACGCTAAGATTAAGGTCGT+TGG | 0.492712 | 5.1:-75191117 | MS.gene63836:CDS |
| TCATCTATTCAATCAGCCAC+TGG | 0.493122 | 5.1:-75187785 | MS.gene63836:CDS |
| AACTTTGGAAGATAAGTTTG+AGG | 0.493944 | 5.1:+75187020 | None:intergenic |
| GTCCGGTGCTGCCCCAGTTG+TGG | 0.494437 | 5.1:-75189792 | MS.gene63836:CDS |
| GTTAACCGCATGATTGGTAG+TGG | 0.501522 | 5.1:-75191069 | MS.gene63836:CDS |
| GTGTTCATAACAGCTGGGAT+GGG | 0.506181 | 5.1:-75189827 | MS.gene63836:CDS |
| ATACCCTGTTGACTTCCTGC+AGG | 0.506393 | 5.1:+75187726 | None:intergenic |
| CATCTATTCAATCAGCCACT+GGG | 0.515602 | 5.1:-75187784 | MS.gene63836:CDS |
| GCTTCTTGACAAAGTGGCCG+AGG | 0.517881 | 5.1:-75187079 | MS.gene63836:CDS |
| TTGATATTTGAGCCACAACT+GGG | 0.519459 | 5.1:+75189780 | None:intergenic |
| AGACTTCTATGCAATTAATA+CGG | 0.522331 | 5.1:-75190120 | MS.gene63836:CDS |
| AAGATAAGTTTGAGGACTTG+AGG | 0.523933 | 5.1:+75187028 | None:intergenic |
| ATAACAGCTGGGATGGGTGG+GGG | 0.529972 | 5.1:-75189821 | MS.gene63836:CDS |
| GACTCTGGTACTGCAATGCT+CGG | 0.530970 | 5.1:-75187881 | MS.gene63836:CDS |
| AAATCCACATTCACAAGTCC+AGG | 0.531100 | 5.1:+75187929 | None:intergenic |
| GATTAAGGTCGTTGGAATTG+GGG | 0.533391 | 5.1:-75191109 | MS.gene63836:CDS |
| TTACGTCCTTCAAAACTGAA+AGG | 0.535553 | 5.1:+75189719 | None:intergenic |
| CTCGGAGTAGGTGTTTCCTC+TGG | 0.540323 | 5.1:-75187863 | MS.gene63836:CDS |
| ATTGGAGAGCTTCTGACTCG+TGG | 0.542831 | 5.1:-75190053 | MS.gene63836:CDS |
| ATTAAGGTCGTTGGAATTGG+GGG | 0.543385 | 5.1:-75191108 | MS.gene63836:CDS |
| CACGTGACTATCATCGCCAC+TGG | 0.547688 | 5.1:-75187153 | MS.gene63836:CDS |
| GGTGTTCATAACAGCTGGGA+TGG | 0.553850 | 5.1:-75189828 | MS.gene63836:CDS |
| AGTAGGAACACCTGCCTGCA+AGG | 0.555045 | 5.1:+75189691 | None:intergenic |
| CGGTGCTCTAGATTCAACTT+TGG | 0.558458 | 5.1:+75187005 | None:intergenic |
| GGTACTGCAATGCTCGGAGT+AGG | 0.561514 | 5.1:-75187875 | MS.gene63836:CDS |
| GTTTGAGGACTTGAGGGGAG+CGG | 0.564246 | 5.1:+75187035 | None:intergenic |
| AGGAAAGGACATTACCCTGC+AGG | 0.569822 | 5.1:-75187741 | MS.gene63836:CDS |
| AGAAGCTGCTAACAGATCCA+AGG | 0.573525 | 5.1:-75187110 | MS.gene63836:CDS |
| GTTGTTGATGATCGTTACAC+CGG | 0.583436 | 5.1:-75187183 | MS.gene63836:CDS |
| ACAAGCTGCGGAGGAATCAA+AGG | 0.584191 | 5.1:-75189885 | MS.gene63836:CDS |
| ATAGTGATGCAGGTACTGGC+GGG | 0.584393 | 5.1:-75189925 | MS.gene63836:intron |
| GTATAATATTACTGGAGGAA+AGG | 0.584416 | 5.1:-75187756 | MS.gene63836:CDS |
| TGTGGCTCAAATATCAAAAG+AGG | 0.584777 | 5.1:-75189774 | MS.gene63836:CDS |
| AGTGAAACTGAATGTGAAGT+GGG | 0.593083 | 5.1:+75191207 | None:intergenic |
| TAGTGATGAATTGTGGAAGA+AGG | 0.594596 | 5.1:+75191230 | None:intergenic |
| TTGTTGATGATCGTTACACC+GGG | 0.600097 | 5.1:-75187182 | MS.gene63836:CDS |
| GATACCTGGACTTGTGAATG+TGG | 0.601582 | 5.1:-75187933 | MS.gene63836:CDS |
| GCTCAAATATCAAAAGAGGC+AGG | 0.602252 | 5.1:-75189770 | MS.gene63836:CDS |
| CTTCTTGACAAAGTGGCCGA+GGG | 0.602545 | 5.1:-75187078 | MS.gene63836:CDS |
| AAGTGGGTAGTGATGAATTG+TGG | 0.602583 | 5.1:+75191223 | None:intergenic |
| GATAGTGATGCAGGTACTGG+CGG | 0.603838 | 5.1:-75189926 | MS.gene63836:intron |
| CCAAATATAATATTGGCAGA+AGG | 0.604139 | 5.1:+75187210 | None:intergenic |
| TGCTAAGCTTCTTGACAAAG+TGG | 0.604517 | 5.1:-75187085 | MS.gene63836:CDS |
| GATAGTCACGTGAATCTCCC+CGG | 0.604903 | 5.1:+75187164 | None:intergenic |
| ATTTGGTGTTCATAACAGCT+GGG | 0.611725 | 5.1:-75189832 | MS.gene63836:CDS |
| TTTGGGCGAACAAGCTGCGG+AGG | 0.616087 | 5.1:-75189894 | MS.gene63836:CDS |
| AAAGCTGTGATGAAAGACTC+TGG | 0.621028 | 5.1:-75187896 | MS.gene63836:CDS |
| AAGTGAAACTGAATGTGAAG+TGG | 0.622125 | 5.1:+75191206 | None:intergenic |
| TACCCTGTTGACTTCCTGCA+GGG | 0.624886 | 5.1:+75187727 | None:intergenic |
| AGACGAAAAGCATCCTGGAG+TGG | 0.632007 | 5.1:+75189470 | None:intergenic |
| GATAAGTTTGAGGACTTGAG+GGG | 0.636208 | 5.1:+75187030 | None:intergenic |
| TATTCAATCAGCCACTGGGG+TGG | 0.646947 | 5.1:-75187780 | MS.gene63836:CDS |
| TACCCTGCAGGAAGTCAACA+GGG | 0.647460 | 5.1:-75187729 | MS.gene63836:CDS |
| GAGGCAGGTTACTTGACCGT+GGG | 0.648556 | 5.1:-75189755 | MS.gene63836:CDS |
| GTGGTGTATAATATTACTGG+AGG | 0.650305 | 5.1:-75187761 | MS.gene63836:CDS |
| GAAGCTGCTAACAGATCCAA+GGG | 0.650445 | 5.1:-75187109 | MS.gene63836:CDS |
| AGAGGCAGGTTACTTGACCG+TGG | 0.660274 | 5.1:-75189756 | MS.gene63836:CDS |
| AAAAGACTGCGAAAAGCCAG+TGG | 0.669333 | 5.1:+75187137 | None:intergenic |
| AGGATATGTAACAACGCCCA+CGG | 0.675492 | 5.1:+75189739 | None:intergenic |
| GTAAACCACTACCAATCATG+CGG | 0.685390 | 5.1:+75191064 | None:intergenic |
| ATCTATTCAATCAGCCACTG+GGG | 0.689596 | 5.1:-75187783 | MS.gene63836:CDS |
| TGATATTTGAGCCACAACTG+GGG | 0.715087 | 5.1:+75189781 | None:intergenic |
| AATATTATACACCACCCCAG+TGG | 0.754567 | 5.1:+75187769 | None:intergenic |
| TGTTGATGATCGTTACACCG+GGG | 0.787369 | 5.1:-75187181 | MS.gene63836:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATATATTATTTTAATG+AGG | - | chr5.1:75190237-75190256 | MS.gene63836:intron | 10.0% |
| !! | AATACTATTGTTCAATAAAA+TGG | - | chr5.1:75188663-75188682 | MS.gene63836:intron | 15.0% |
| !! | GTTAAGATTAAGAATTTAAA+TGG | - | chr5.1:75189660-75189679 | MS.gene63836:intron | 15.0% |
| !! | TACTCATAATCTAATAAAAT+TGG | - | chr5.1:75189153-75189172 | MS.gene63836:intron | 15.0% |
| !!! | ATTCTAAATTAAAAAAGTAC+AGG | + | chr5.1:75189595-75189614 | None:intergenic | 15.0% |
| !!! | GATTTAGAATTAATGATTTT+AGG | - | chr5.1:75190698-75190717 | MS.gene63836:intron | 15.0% |
| !!! | TTATTGGTTAAAATTCATAT+CGG | - | chr5.1:75190110-75190129 | MS.gene63836:CDS | 15.0% |
| !! | AAAACTTCTACAATATATCA+CGG | + | chr5.1:75188019-75188038 | None:intergenic | 20.0% |
| !! | ACTTTATGGAAGAAAAATAA+AGG | + | chr5.1:75187251-75187270 | None:intergenic | 20.0% |
| !! | AGGTAAAAATGATAACTTTA+TGG | + | chr5.1:75187265-75187284 | None:intergenic | 20.0% |
| !! | ATCAATTTCTCAATAAAACT+AGG | + | chr5.1:75188296-75188315 | None:intergenic | 20.0% |
| !! | CAATTTATAGCATTGTTAAT+GGG | - | chr5.1:75187308-75187327 | MS.gene63836:intron | 20.0% |
| !! | CATTAACAATGCTATAAATT+GGG | + | chr5.1:75187309-75187328 | None:intergenic | 20.0% |
| !! | CTTTATGGAAGAAAAATAAA+GGG | + | chr5.1:75187250-75187269 | None:intergenic | 20.0% |
| !! | TTTATTGAGAAATTGATTGA+TGG | - | chr5.1:75188299-75188318 | MS.gene63836:intron | 20.0% |
| !!! | AGTCTTATATTACTATTGTT+AGG | - | chr5.1:75189541-75189560 | MS.gene63836:CDS | 20.0% |
| !!! | ATAGCAATTTAAAGTCAATT+CGG | - | chr5.1:75189125-75189144 | MS.gene63836:intron | 20.0% |
| !!! | ATTCATTTGATATTTTGTTC+AGG | - | chr5.1:75188687-75188706 | MS.gene63836:intron | 20.0% |
| !!! | CATAGTTTTATTCAGAAATT+TGG | - | chr5.1:75187446-75187465 | MS.gene63836:intron | 20.0% |
| !!! | TATTCTATTCTTCTTTTTCA+TGG | - | chr5.1:75188899-75188918 | MS.gene63836:intron | 20.0% |
| !!! | TTTAGAATGACACTTTATTA+TGG | - | chr5.1:75189607-75189626 | MS.gene63836:intron | 20.0% |
| ! | AACAGCTCCAAATATAATAT+TGG | + | chr5.1:75191072-75191091 | None:intergenic | 25.0% |
| ! | AGACTTCTATGCAATTAATA+CGG | - | chr5.1:75188152-75188171 | MS.gene63836:intron | 25.0% |
| ! | AGGAAAAAAATAGATCCTTT+AGG | + | chr5.1:75190862-75190881 | None:intergenic | 25.0% |
| ! | ATAACTTTCTTGAAGAGAAA+AGG | - | chr5.1:75190819-75190838 | MS.gene63836:intron | 25.0% |
| ! | ATATTACTATTGTTAGGTGT+TGG | - | chr5.1:75189547-75189566 | MS.gene63836:CDS | 25.0% |
| ! | ATCAAGCAATTTGAATCAAA+AGG | + | chr5.1:75188329-75188348 | None:intergenic | 25.0% |
| ! | ATCACCTATAGTAAAAAAGA+TGG | - | chr5.1:75187627-75187646 | MS.gene63836:intron | 25.0% |
| ! | ATCCTTACTACAAAATCTAT+AGG | + | chr5.1:75187694-75187713 | None:intergenic | 25.0% |
| ! | ATTTCTCAATAAAACTAGGA+AGG | + | chr5.1:75188292-75188311 | None:intergenic | 25.0% |
| ! | CCAATTTATAGCATTGTTAA+TGG | - | chr5.1:75187307-75187326 | MS.gene63836:intron | 25.0% |
| ! | CCATTAACAATGCTATAAAT+TGG | + | chr5.1:75187310-75187329 | None:intergenic | 25.0% |
| ! | GACATGTATAATAAAGAGAA+AGG | + | chr5.1:75190993-75191012 | None:intergenic | 25.0% |
| ! | GGAAAAAAATAGATCCTTTA+GGG | + | chr5.1:75190861-75190880 | None:intergenic | 25.0% |
| ! | GTTGATGTATAATGCATTTA+CGG | - | chr5.1:75189682-75189701 | MS.gene63836:intron | 25.0% |
| ! | TAAATTGCTATGTAAACTCA+AGG | + | chr5.1:75189116-75189135 | None:intergenic | 25.0% |
| ! | TAACTTTCTTGAAGAGAAAA+GGG | - | chr5.1:75190820-75190839 | MS.gene63836:intron | 25.0% |
| ! | TATTACTATTGTTAGGTGTT+GGG | - | chr5.1:75189548-75189567 | MS.gene63836:CDS | 25.0% |
| ! | TGAATAGATGATCCAATTAA+AGG | + | chr5.1:75190478-75190497 | None:intergenic | 25.0% |
| ! | TGGTTTATGGTAGAATATTA+TGG | - | chr5.1:75187824-75187843 | MS.gene63836:CDS | 25.0% |
| ! | TTAACCAATAGAAAAAAGTG+TGG | - | chr5.1:75190185-75190204 | MS.gene63836:intron | 25.0% |
| ! | TTTCTCTTCAAGAAAGTTAT+TGG | + | chr5.1:75190819-75190838 | None:intergenic | 25.0% |
| !! | AGATTTAGAGTTTAATGAGT+TGG | - | chr5.1:75187792-75187811 | MS.gene63836:CDS | 25.0% |
| !! | TAATTATTGTTGTTGTTGAC+TGG | - | chr5.1:75187398-75187417 | MS.gene63836:intron | 25.0% |
| !! | TTTTATTCAGAAATTTGGAC+TGG | - | chr5.1:75187451-75187470 | MS.gene63836:intron | 25.0% |
| !!! | AAGAATCTTTTCAAGTCTAA+TGG | + | chr5.1:75188958-75188977 | None:intergenic | 25.0% |
| !!! | AATACTAATGTTGGTTTCTT+CGG | - | chr5.1:75188107-75188126 | MS.gene63836:intron | 25.0% |
| !!! | AGAATCTTTTCAAGTCTAAT+GGG | + | chr5.1:75188957-75188976 | None:intergenic | 25.0% |
| !!! | ATTTCTTTGAAGCTTTTCAA+TGG | + | chr5.1:75188722-75188741 | None:intergenic | 25.0% |
| !!! | CGTAATTTTGATTAGATAGA+AGG | + | chr5.1:75190789-75190808 | None:intergenic | 25.0% |
| !!! | TTATTTTATTCTCGTGTTGT+TGG | + | chr5.1:75187514-75187533 | None:intergenic | 25.0% |
| AACATTAGTATTCACAAGCA+AGG | + | chr5.1:75188099-75188118 | None:intergenic | 30.0% | |
| AATAAAACTAGGAAGGCTAT+AGG | + | chr5.1:75188285-75188304 | None:intergenic | 30.0% | |
| AATAGTAGCACTAGAATGAA+AGG | + | chr5.1:75187919-75187938 | None:intergenic | 30.0% | |
| AATGAACTTACACAACTAGA+GGG | - | chr5.1:75189375-75189394 | MS.gene63836:intron | 30.0% | |
| AATGTTAAATTGTCCCACAT+CGG | + | chr5.1:75189334-75189353 | None:intergenic | 30.0% | |
| ACCTATAGTAAAAAAGATGG+TGG | - | chr5.1:75187630-75187649 | MS.gene63836:intron | 30.0% | |
| AGCTGTAAATGTGATAACTT+TGG | - | chr5.1:75187361-75187380 | MS.gene63836:intron | 30.0% | |
| ATGTCATGTAGAATAATGCT+AGG | - | chr5.1:75189721-75189740 | MS.gene63836:CDS | 30.0% | |
| ATTTAGACAAAAGGACTACA+CGG | + | chr5.1:75189031-75189050 | None:intergenic | 30.0% | |
| CCAAATATAATATTGGCAGA+AGG | + | chr5.1:75191065-75191084 | None:intergenic | 30.0% | |
| CCTTCTGCCAATATTATATT+TGG | - | chr5.1:75191062-75191081 | MS.gene63836:CDS | 30.0% | |
| CTAATGTTAAATTTCCACAG+AGG | + | chr5.1:75189426-75189445 | None:intergenic | 30.0% | |
| GAAAAAAACAGAGAAAACAG+AGG | - | chr5.1:75189922-75189941 | MS.gene63836:intron | 30.0% | |
| GAAAATAACTCAGTAATGAC+AGG | + | chr5.1:75188632-75188651 | None:intergenic | 30.0% | |
| GAGTTCCACTAAATTTATGT+GGG | + | chr5.1:75190156-75190175 | None:intergenic | 30.0% | |
| GCTGAAAACCCTATTAAAAT+TGG | - | chr5.1:75188201-75188220 | MS.gene63836:intron | 30.0% | |
| GTATAATATTACTGGAGGAA+AGG | - | chr5.1:75190516-75190535 | MS.gene63836:intron | 30.0% | |
| TCGGCTTATATTTGTAATCA+GGG | - | chr5.1:75188126-75188145 | MS.gene63836:intron | 30.0% | |
| TGAGTTCCACTAAATTTATG+TGG | + | chr5.1:75190157-75190176 | None:intergenic | 30.0% | |
| TTCGGCTTATATTTGTAATC+AGG | - | chr5.1:75188125-75188144 | MS.gene63836:intron | 30.0% | |
| TTGCTTGTGAATACTAATGT+TGG | - | chr5.1:75188098-75188117 | MS.gene63836:intron | 30.0% | |
| TTGTAGTAAGGATAGTAGAT+CGG | - | chr5.1:75187701-75187720 | MS.gene63836:intron | 30.0% | |
| ! | AAAAATAGATCCTTTAGGGA+TGG | + | chr5.1:75190857-75190876 | None:intergenic | 30.0% |
| ! | AAATTTGGTAACTAATAGGG+AGG | + | chr5.1:75189311-75189330 | None:intergenic | 30.0% |
| ! | AACCAATAAAAGAGTGTGTT+GGG | + | chr5.1:75190099-75190118 | None:intergenic | 30.0% |
| ! | AACTTTGGAAGATAAGTTTG+AGG | + | chr5.1:75191255-75191274 | None:intergenic | 30.0% |
| ! | CGGAAATTTGGTAACTAATA+GGG | + | chr5.1:75189314-75189333 | None:intergenic | 30.0% |
| ! | TAACCAATAAAAGAGTGTGT+TGG | + | chr5.1:75190100-75190119 | None:intergenic | 30.0% |
| ! | TAAGTTAACTCGTTTTGCAT+AGG | + | chr5.1:75190280-75190299 | None:intergenic | 30.0% |
| ! | TCAATGCGTGTAATTTTTAC+AGG | - | chr5.1:75191019-75191038 | MS.gene63836:intron | 30.0% |
| ! | TCGGAAATTTGGTAACTAAT+AGG | + | chr5.1:75189315-75189334 | None:intergenic | 30.0% |
| ! | TCTAAAATAAGTGAAGGGAA+AGG | + | chr5.1:75187285-75187304 | None:intergenic | 30.0% |
| ! | TTGAGAAATTGATTGATGGT+TGG | - | chr5.1:75188303-75188322 | MS.gene63836:intron | 30.0% |
| !! | ACATATCCTTTCAGTTTTGA+AGG | - | chr5.1:75188547-75188566 | MS.gene63836:intron | 30.0% |
| !! | AGAAGCTCTCCAATTTTAAT+AGG | + | chr5.1:75188213-75188232 | None:intergenic | 30.0% |
| !! | GAAGCTCTCCAATTTTAATA+GGG | + | chr5.1:75188212-75188231 | None:intergenic | 30.0% |
| !! | TGGGTTCTAAAATAAGTGAA+GGG | + | chr5.1:75187290-75187309 | None:intergenic | 30.0% |
| !! | TGTTGATAACGCTAAGATTA+AGG | - | chr5.1:75187148-75187167 | MS.gene63836:CDS | 30.0% |
| !! | TTGGGTTCTAAAATAAGTGA+AGG | + | chr5.1:75187291-75187310 | None:intergenic | 30.0% |
| !!! | ACGTTTTTAAGTAGATCAGT+AGG | - | chr5.1:75189763-75189782 | MS.gene63836:CDS | 30.0% |
| !!! | ACTTTCTCTGTTTTTTTGCT+TGG | + | chr5.1:75189899-75189918 | None:intergenic | 30.0% |
| !!! | TCCACCATCTTTTTTACTAT+AGG | + | chr5.1:75187634-75187653 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTGTAAGAGAAGA+AGG | + | chr5.1:75187002-75187021 | None:intergenic | 30.0% |
| AAGATAAGTTTGAGGACTTG+AGG | + | chr5.1:75191247-75191266 | None:intergenic | 35.0% | |
| AAGATTAAGGTCGTTGGAAT+TGG | - | chr5.1:75187161-75187180 | MS.gene63836:CDS | 35.0% | |
| AAGTGAAACTGAATGTGAAG+TGG | + | chr5.1:75187069-75187088 | None:intergenic | 35.0% | |
| AATTCTCAAACAACGAGAGT+AGG | + | chr5.1:75188601-75188620 | None:intergenic | 35.0% | |
| ACAAAGCCAATGATGATAAC+TGG | + | chr5.1:75190956-75190975 | None:intergenic | 35.0% | |
| ACACCAAATCTGATCCTTTA+AGG | + | chr5.1:75188429-75188448 | None:intergenic | 35.0% | |
| ACAGAGCAATTAGTGAAAAC+AGG | - | chr5.1:75189869-75189888 | MS.gene63836:CDS | 35.0% | |
| ACGCAGAATCAAAGTGTAAA+AGG | + | chr5.1:75190624-75190643 | None:intergenic | 35.0% | |
| AGAGCAATTAGTGAAAACAG+GGG | - | chr5.1:75189871-75189890 | MS.gene63836:CDS | 35.0% | |
| AGATAAGTTTGAGGACTTGA+GGG | + | chr5.1:75191246-75191265 | None:intergenic | 35.0% | |
| AGATTAAGGTCGTTGGAATT+GGG | - | chr5.1:75187162-75187181 | MS.gene63836:CDS | 35.0% | |
| AGTGAAAACATTTGCAAGCA+AGG | + | chr5.1:75188262-75188281 | None:intergenic | 35.0% | |
| AGTGAAACTGAATGTGAAGT+GGG | + | chr5.1:75187068-75187087 | None:intergenic | 35.0% | |
| AGTGCAATAGCTTAAACTAG+AGG | - | chr5.1:75189444-75189463 | MS.gene63836:CDS | 35.0% | |
| AGTTACCAAATTTCCGATGT+GGG | - | chr5.1:75189318-75189337 | MS.gene63836:intron | 35.0% | |
| ATATGTGTTGTGAGACTAGA+TGG | - | chr5.1:75187563-75187582 | MS.gene63836:intron | 35.0% | |
| ATGTCAAGAAGACGATCATT+TGG | + | chr5.1:75188766-75188785 | None:intergenic | 35.0% | |
| CAATGAACTTACACAACTAG+AGG | - | chr5.1:75189374-75189393 | MS.gene63836:intron | 35.0% | |
| CACCAAATCTGATCCTTTAA+GGG | + | chr5.1:75188428-75188447 | None:intergenic | 35.0% | |
| CAGAGCAATTAGTGAAAACA+GGG | - | chr5.1:75189870-75189889 | MS.gene63836:CDS | 35.0% | |
| CTAAAAAAAGAGCTTTCGTG+GGG | + | chr5.1:75191294-75191313 | None:intergenic | 35.0% | |
| CTACATCCAGTTATCATCAT+TGG | - | chr5.1:75190947-75190966 | MS.gene63836:intron | 35.0% | |
| CTCTTCAAGAAAGTTATTGG+AGG | + | chr5.1:75190816-75190835 | None:intergenic | 35.0% | |
| GGTCACATGATTTAGACAAA+AGG | + | chr5.1:75189040-75189059 | None:intergenic | 35.0% | |
| GTAGTCTTTCAAGAGCAAAA+TGG | + | chr5.1:75190931-75190950 | None:intergenic | 35.0% | |
| GTGCAATAGCTTAAACTAGA+GGG | - | chr5.1:75189445-75189464 | MS.gene63836:CDS | 35.0% | |
| GTGGTGTATAATATTACTGG+AGG | - | chr5.1:75190511-75190530 | MS.gene63836:intron | 35.0% | |
| TAAAAAAAGAGCTTTCGTGG+GGG | + | chr5.1:75191293-75191312 | None:intergenic | 35.0% | |
| TACATCTATACCATCCCTAA+AGG | - | chr5.1:75190844-75190863 | MS.gene63836:intron | 35.0% | |
| TAGTGATGAATTGTGGAAGA+AGG | + | chr5.1:75187045-75187064 | None:intergenic | 35.0% | |
| TAGTTACCAAATTTCCGATG+TGG | - | chr5.1:75189317-75189336 | MS.gene63836:intron | 35.0% | |
| TATGTGTTGTGAGACTAGAT+GGG | - | chr5.1:75187564-75187583 | MS.gene63836:intron | 35.0% | |
| TCAAGTCCAATTATGAAGAG+TGG | + | chr5.1:75188989-75189008 | None:intergenic | 35.0% | |
| TCATAGGTTATGGGAAACAA+AGG | - | chr5.1:75189212-75189231 | MS.gene63836:intron | 35.0% | |
| TCTACTTAAAAACGTGAACC+TGG | + | chr5.1:75189758-75189777 | None:intergenic | 35.0% | |
| TGGACTTGAACTTATGTCAA+GGG | - | chr5.1:75189000-75189019 | MS.gene63836:intron | 35.0% | |
| TGTGGCTCAAATATCAAAAG+AGG | - | chr5.1:75188498-75188517 | MS.gene63836:intron | 35.0% | |
| TTACGTCCTTCAAAACTGAA+AGG | + | chr5.1:75188556-75188575 | None:intergenic | 35.0% | |
| TTGATATTTGAGCCACAACT+GGG | + | chr5.1:75188495-75188514 | None:intergenic | 35.0% | |
| TTGGACTTGAACTTATGTCA+AGG | - | chr5.1:75188999-75189018 | MS.gene63836:intron | 35.0% | |
| TTTGATATTTGAGCCACAAC+TGG | + | chr5.1:75188496-75188515 | None:intergenic | 35.0% | |
| ! | ACCAATAGAAAAAAGTGTGG+TGG | - | chr5.1:75190188-75190207 | MS.gene63836:intron | 35.0% |
| ! | ATAGTGCACTAATTTTTCCC+TGG | - | chr5.1:75189247-75189266 | MS.gene63836:intron | 35.0% |
| ! | ATCCCAACACACTCTTTTAT+TGG | - | chr5.1:75190094-75190113 | MS.gene63836:CDS | 35.0% |
| ! | GGCCTATAGATTTTGTAGTA+AGG | - | chr5.1:75187689-75187708 | MS.gene63836:intron | 35.0% |
| ! | TAATGAGTTGGATCGAAATC+TGG | - | chr5.1:75187804-75187823 | MS.gene63836:CDS | 35.0% |
| ! | TTGGATCGAAATCTGGTTTA+TGG | - | chr5.1:75187811-75187830 | MS.gene63836:CDS | 35.0% |
| ! | TTTACAGGTTGTGACTAGTT+TGG | - | chr5.1:75191034-75191053 | MS.gene63836:intron | 35.0% |
| !! | AAATTGCTTGATAGTGATGC+AGG | - | chr5.1:75188337-75188356 | MS.gene63836:intron | 35.0% |
| !! | ATTTGGTGTTCATAACAGCT+GGG | - | chr5.1:75188440-75188459 | MS.gene63836:intron | 35.0% |
| !! | GTAAAAAAGATGGTGGAAAC+TGG | - | chr5.1:75187637-75187656 | MS.gene63836:intron | 35.0% |
| !! | TTTTAAGTAGATCAGTAGGC+TGG | - | chr5.1:75189767-75189786 | MS.gene63836:CDS | 35.0% |
| !!! | ACCACCACACTTTTTTCTAT+TGG | + | chr5.1:75190192-75190211 | None:intergenic | 35.0% |
| !!! | CAATTTTAACTTCGTTCGCA+TGG | + | chr5.1:75187989-75188008 | None:intergenic | 35.0% |
| AAAGCTGTGATGAAAGACTC+TGG | - | chr5.1:75190376-75190395 | MS.gene63836:intron | 40.0% | |
| AAATCCACATTCACAAGTCC+AGG | + | chr5.1:75190346-75190365 | None:intergenic | 40.0% | |
| AAATTTCCACAGAGGAAAGC+TGG | + | chr5.1:75189418-75189437 | None:intergenic | 40.0% | |
| AACGCTAAGATTAAGGTCGT+TGG | - | chr5.1:75187155-75187174 | MS.gene63836:CDS | 40.0% | |
| AAGTCTAATGGGACCAACTA+GGG | + | chr5.1:75188946-75188965 | None:intergenic | 40.0% | |
| AAGTGGGTAGTGATGAATTG+TGG | + | chr5.1:75187052-75187071 | None:intergenic | 40.0% | |
| AATATTATACACCACCCCAG+TGG | + | chr5.1:75190506-75190525 | None:intergenic | 40.0% | |
| ACTACCAATCATGCGGTTAA+CGG | + | chr5.1:75187204-75187223 | None:intergenic | 40.0% | |
| AGTAAGGATAGTAGATCGGA+TGG | - | chr5.1:75187705-75187724 | MS.gene63836:intron | 40.0% | |
| ATCTATTCAATCAGCCACTG+GGG | - | chr5.1:75190489-75190508 | MS.gene63836:intron | 40.0% | |
| ATCTGAAAGAACACACAACC+AGG | + | chr5.1:75190322-75190341 | None:intergenic | 40.0% | |
| ATGAAGCACAAACTCAAGAG+AGG | + | chr5.1:75190882-75190901 | None:intergenic | 40.0% | |
| ATGGAGGATAGTCAATTCAC+TGG | - | chr5.1:75187724-75187743 | MS.gene63836:CDS | 40.0% | |
| ATTAAGGTCGTTGGAATTGG+GGG | - | chr5.1:75187164-75187183 | MS.gene63836:CDS | 40.0% | |
| ATTGTCCCACATCGGAAATT+TGG | + | chr5.1:75189326-75189345 | None:intergenic | 40.0% | |
| CATCTATTCAATCAGCCACT+GGG | - | chr5.1:75190488-75190507 | MS.gene63836:intron | 40.0% | |
| CGTACGTGTTCATAGGTTAT+GGG | - | chr5.1:75189203-75189222 | MS.gene63836:intron | 40.0% | |
| CTACATGTTCAAACCACCTA+AGG | + | chr5.1:75187663-75187682 | None:intergenic | 40.0% | |
| CTAGAATCGTACGTGTTCAT+AGG | - | chr5.1:75189196-75189215 | MS.gene63836:intron | 40.0% | |
| GAGGAGGACTCTGTATAAAA+CGG | + | chr5.1:75189292-75189311 | None:intergenic | 40.0% | |
| GAGTTGCCACTCTTCATAAT+TGG | - | chr5.1:75188980-75188999 | MS.gene63836:intron | 40.0% | |
| GATAAGTTTGAGGACTTGAG+GGG | + | chr5.1:75191245-75191264 | None:intergenic | 40.0% | |
| GATTAAGGTCGTTGGAATTG+GGG | - | chr5.1:75187163-75187182 | MS.gene63836:CDS | 40.0% | |
| GATTCGTAAGTAGGATCAGT+AGG | - | chr5.1:75189821-75189840 | MS.gene63836:CDS | 40.0% | |
| GCATGATTTAAGTCCCTAGT+TGG | - | chr5.1:75188930-75188949 | MS.gene63836:intron | 40.0% | |
| GCTCAAATATCAAAAGAGGC+AGG | - | chr5.1:75188502-75188521 | MS.gene63836:intron | 40.0% | |
| GGGGTGGTGTATAATATTAC+TGG | - | chr5.1:75190508-75190527 | MS.gene63836:intron | 40.0% | |
| GGTTTGAACATGTAGAGAGA+AGG | - | chr5.1:75187668-75187687 | MS.gene63836:intron | 40.0% | |
| GTAAACCACTACCAATCATG+CGG | + | chr5.1:75187211-75187230 | None:intergenic | 40.0% | |
| GTATTCCTAGCATTGTAGTC+AGG | + | chr5.1:75190060-75190079 | None:intergenic | 40.0% | |
| GTGAAAGATCGTAAACACGA+GGG | - | chr5.1:75189789-75189808 | MS.gene63836:CDS | 40.0% | |
| TCATCTATTCAATCAGCCAC+TGG | - | chr5.1:75190487-75190506 | MS.gene63836:intron | 40.0% | |
| TCGTAACACGATTCGTAAGT+AGG | - | chr5.1:75189812-75189831 | MS.gene63836:CDS | 40.0% | |
| TCGTACGTGTTCATAGGTTA+TGG | - | chr5.1:75189202-75189221 | MS.gene63836:intron | 40.0% | |
| TCTGAAAGAACACACAACCA+GGG | + | chr5.1:75190321-75190340 | None:intergenic | 40.0% | |
| TGATATTTGAGCCACAACTG+GGG | + | chr5.1:75188494-75188513 | None:intergenic | 40.0% | |
| TGCCCTTAAAGGATCAGATT+TGG | - | chr5.1:75188423-75188442 | MS.gene63836:intron | 40.0% | |
| TGCTAAGCTTCTTGACAAAG+TGG | - | chr5.1:75191187-75191206 | MS.gene63836:CDS | 40.0% | |
| TGTGTAAGTTCATTGTGCGA+GGG | + | chr5.1:75189369-75189388 | None:intergenic | 40.0% | |
| TGTGTGTTCTTTCAGATACC+TGG | - | chr5.1:75190325-75190344 | MS.gene63836:intron | 40.0% | |
| TTAACAACCTTGCACACAAC+AGG | + | chr5.1:75189061-75189080 | None:intergenic | 40.0% | |
| TTGTGTAAGTTCATTGTGCG+AGG | + | chr5.1:75189370-75189389 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACACTAAG+TGG | + | chr5.1:75187875-75187894 | None:intergenic | 40.0% |
| ! | AGCCTTATCCTACACTAAGT+GGG | + | chr5.1:75187874-75187893 | None:intergenic | 40.0% |
| ! | GAATGTGAGAGAAGCTTGTT+TGG | + | chr5.1:75187020-75187039 | None:intergenic | 40.0% |
| ! | GCTACTTTGGCTCCTTTAAT+TGG | - | chr5.1:75190463-75190482 | MS.gene63836:intron | 40.0% |
| ! | TGTCTTGCTTTCTTTTCCCT+CGG | + | chr5.1:75191213-75191232 | None:intergenic | 40.0% |
| ! | TGTTGACTGGTTCATTCTAG+TGG | - | chr5.1:75187411-75187430 | MS.gene63836:intron | 40.0% |
| ! | TTTGGTAACTAATAGGGAGG+AGG | + | chr5.1:75189308-75189327 | None:intergenic | 40.0% |
| !! | AACGTTTCACACGTCGTTTT+GGG | - | chr5.1:75187102-75187121 | MS.gene63836:CDS | 40.0% |
| !! | ATTGGTAGTGGTTTACAGGT+GGG | - | chr5.1:75187215-75187234 | MS.gene63836:CDS | 40.0% |
| !! | CATGATTGGTAGTGGTTTAC+AGG | - | chr5.1:75187211-75187230 | MS.gene63836:CDS | 40.0% |
| !! | GATTTGGTGTTCATAACAGC+TGG | - | chr5.1:75188439-75188458 | MS.gene63836:intron | 40.0% |
| !! | GTTGTTGATGATCGTTACAC+CGG | - | chr5.1:75191089-75191108 | MS.gene63836:CDS | 40.0% |
| !! | TTGTTGATGATCGTTACACC+GGG | - | chr5.1:75191090-75191109 | MS.gene63836:CDS | 40.0% |
| !! | TTTGGACTGGCTATGTTGTA+TGG | - | chr5.1:75187464-75187483 | MS.gene63836:intron | 40.0% |
| AAAAGACTGCGAAAAGCCAG+TGG | + | chr5.1:75191138-75191157 | None:intergenic | 45.0% | |
| AAACGTGAACCTGGCTACAT+TGG | + | chr5.1:75189749-75189768 | None:intergenic | 45.0% | |
| AAGGATAGTAGATCGGATGG+AGG | - | chr5.1:75187708-75187727 | MS.gene63836:intron | 45.0% | |
| AATGCCGTTAACCGCATGAT+TGG | - | chr5.1:75187197-75187216 | MS.gene63836:CDS | 45.0% | |
| ACATTTGCAAGCAAGGAGAG+TGG | + | chr5.1:75188255-75188274 | None:intergenic | 45.0% | |
| ACCCCACTTAGTGTAGGATA+AGG | - | chr5.1:75187869-75187888 | MS.gene63836:CDS | 45.0% | |
| ACTGGCTATGTTGTATGGAG+CGG | - | chr5.1:75187469-75187488 | MS.gene63836:intron | 45.0% | |
| AGAAGCTGCTAACAGATCCA+AGG | - | chr5.1:75191162-75191181 | MS.gene63836:CDS | 45.0% | |
| AGCGTGAAGTTCATTTGACC+AGG | + | chr5.1:75189268-75189287 | None:intergenic | 45.0% | |
| AGGACGTAAAAGATCCTTGC+AGG | - | chr5.1:75188567-75188586 | MS.gene63836:intron | 45.0% | |
| AGGATATGTAACAACGCCCA+CGG | + | chr5.1:75188536-75188555 | None:intergenic | 45.0% | |
| ATCGGTCCCACCAAATTATG+CGG | - | chr5.1:75190128-75190147 | MS.gene63836:CDS | 45.0% | |
| CAAGTCTAATGGGACCAACT+AGG | + | chr5.1:75188947-75188966 | None:intergenic | 45.0% | |
| CGGGTCCCACATAAATTTAG+TGG | - | chr5.1:75190148-75190167 | MS.gene63836:intron | 45.0% | |
| CTGAAATTCCCTGAACTCCT+TGG | + | chr5.1:75188846-75188865 | None:intergenic | 45.0% | |
| GAAGCTGCTAACAGATCCAA+GGG | - | chr5.1:75191163-75191182 | MS.gene63836:CDS | 45.0% | |
| GACAACACTAGAGAGAGAGT+TGG | - | chr5.1:75187601-75187620 | MS.gene63836:intron | 45.0% | |
| GAGGATAGTCAATTCACTGG+AGG | - | chr5.1:75187727-75187746 | MS.gene63836:CDS | 45.0% | |
| GATACCTGGACTTGTGAATG+TGG | - | chr5.1:75190339-75190358 | MS.gene63836:intron | 45.0% | |
| GCCTTATCCTACACTAAGTG+GGG | + | chr5.1:75187873-75187892 | None:intergenic | 45.0% | |
| GCGTGAAGTTCATTTGACCA+GGG | + | chr5.1:75189267-75189286 | None:intergenic | 45.0% | |
| GCTATTGCTGATGCCCTTAA+AGG | - | chr5.1:75188412-75188431 | MS.gene63836:intron | 45.0% | |
| GGTGAAAGATCGTAAACACG+AGG | - | chr5.1:75189788-75189807 | MS.gene63836:CDS | 45.0% | |
| GTGTAAGTTCATTGTGCGAG+GGG | + | chr5.1:75189368-75189387 | None:intergenic | 45.0% | |
| GTGTTCATAACAGCTGGGAT+GGG | - | chr5.1:75188445-75188464 | MS.gene63836:intron | 45.0% | |
| GTTAACCGCATGATTGGTAG+TGG | - | chr5.1:75187203-75187222 | MS.gene63836:CDS | 45.0% | |
| TATGTGGGACCCGCATAATT+TGG | + | chr5.1:75190141-75190160 | None:intergenic | 45.0% | |
| TCGATCCTGACTACAATGCT+AGG | - | chr5.1:75190052-75190071 | MS.gene63836:CDS | 45.0% | |
| ! | ACGTGTGAAACGTTGCGTTT+TGG | + | chr5.1:75187096-75187115 | None:intergenic | 45.0% |
| ! | CAACGTTTCACACGTCGTTT+TGG | - | chr5.1:75187101-75187120 | MS.gene63836:CDS | 45.0% |
| ! | CGGTGCTCTAGATTCAACTT+TGG | + | chr5.1:75191270-75191289 | None:intergenic | 45.0% |
| ! | CGTGTGAAACGTTGCGTTTT+GGG | + | chr5.1:75187095-75187114 | None:intergenic | 45.0% |
| ! | GCAGATGATGTTTTACGCCA+AGG | - | chr5.1:75188826-75188845 | MS.gene63836:intron | 45.0% |
| ! | GTGTGAAACGTTGCGTTTTG+GGG | + | chr5.1:75187094-75187113 | None:intergenic | 45.0% |
| ! | GTTTTACGCCAAGGAGTTCA+GGG | - | chr5.1:75188835-75188854 | MS.gene63836:intron | 45.0% |
| ! | TGTTTTACGCCAAGGAGTTC+AGG | - | chr5.1:75188834-75188853 | MS.gene63836:intron | 45.0% |
| ! | TTCTGCTCGGTTTTTACCAG+AGG | + | chr5.1:75190428-75190447 | None:intergenic | 45.0% |
| !! | CTTGATAGTGATGCAGGTAC+TGG | - | chr5.1:75188343-75188362 | MS.gene63836:intron | 45.0% |
| !! | GATTGGTAGTGGTTTACAGG+TGG | - | chr5.1:75187214-75187233 | MS.gene63836:CDS | 45.0% |
| !! | TGTTGATGATCGTTACACCG+GGG | - | chr5.1:75191091-75191110 | MS.gene63836:CDS | 45.0% |
| !! | TTGGTAGTGGTTTACAGGTG+GGG | - | chr5.1:75187216-75187235 | MS.gene63836:CDS | 45.0% |
| !!! | AGGATCGAGTGCTGGTTTTT+AGG | + | chr5.1:75190040-75190059 | None:intergenic | 45.0% |
| !!! | TTAGTATTATTTTTAAAAAT+AGG | - | chr5.1:75189515-75189534 | MS.gene63836:CDS | 5.0% |
| AAAAAGAGCTTTCGTGGGGG+CGG | + | chr5.1:75191290-75191309 | None:intergenic | 50.0% | |
| AACCAGGGTTGTCAAACTCG+AGG | + | chr5.1:75190306-75190325 | None:intergenic | 50.0% | |
| ACAAGCTGCGGAGGAATCAA+AGG | - | chr5.1:75188387-75188406 | MS.gene63836:intron | 50.0% | |
| ACCAGGGTTGTCAAACTCGA+GGG | + | chr5.1:75190305-75190324 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCGACTACA+TGG | + | chr5.1:75187861-75187880 | None:intergenic | 50.0% | |
| AGCAGAAGAAGCAGCAGAAC+AGG | - | chr5.1:75190441-75190460 | MS.gene63836:intron | 50.0% | |
| AGCAGCAGAACAGGCTACTT+TGG | - | chr5.1:75190450-75190469 | MS.gene63836:intron | 50.0% | |
| AGGAAAGGACATTACCCTGC+AGG | - | chr5.1:75190531-75190550 | MS.gene63836:intron | 50.0% | |
| AGTCAATTCACTGGAGGCAG+AGG | - | chr5.1:75187733-75187752 | MS.gene63836:CDS | 50.0% | |
| CATGTGACCTGTTGTGTGCA+AGG | - | chr5.1:75189051-75189070 | MS.gene63836:intron | 50.0% | |
| CGTAAAAGATCCTTGCAGGC+AGG | - | chr5.1:75188571-75188590 | MS.gene63836:intron | 50.0% | |
| CTGGCTATGTTGTATGGAGC+GGG | - | chr5.1:75187470-75187489 | MS.gene63836:intron | 50.0% | |
| CTTCTTGACAAAGTGGCCGA+GGG | - | chr5.1:75191194-75191213 | MS.gene63836:CDS | 50.0% | |
| GACTCTGGTACTGCAATGCT+CGG | - | chr5.1:75190391-75190410 | MS.gene63836:intron | 50.0% | |
| GATAGTCACGTGAATCTCCC+CGG | + | chr5.1:75191111-75191130 | None:intergenic | 50.0% | |
| GCATGGTTGCATAGCATTGC+AGG | + | chr5.1:75187972-75187991 | None:intergenic | 50.0% | |
| GCTAATGCGCTCACAATTGC+TGG | - | chr5.1:75188050-75188069 | MS.gene63836:intron | 50.0% | |
| GGTGTTCATAACAGCTGGGA+TGG | - | chr5.1:75188444-75188463 | MS.gene63836:intron | 50.0% | |
| TACCCTGCAGGAAGTCAACA+GGG | - | chr5.1:75190543-75190562 | MS.gene63836:intron | 50.0% | |
| TACTCACCAGCTTTCCTCTG+TGG | - | chr5.1:75189409-75189428 | MS.gene63836:intron | 50.0% | |
| TAGTCGACCCCACTTAGTGT+AGG | - | chr5.1:75187863-75187882 | MS.gene63836:CDS | 50.0% | |
| TATTCAATCAGCCACTGGGG+TGG | - | chr5.1:75190492-75190511 | MS.gene63836:intron | 50.0% | |
| TCAAGAAGCTTAGCAGCCCT+TGG | + | chr5.1:75191182-75191201 | None:intergenic | 50.0% | |
| TCATAACAGCTGGGATGGGT+GGG | - | chr5.1:75188449-75188468 | MS.gene63836:intron | 50.0% | |
| TCGGTCCCACCAAATTATGC+GGG | - | chr5.1:75190129-75190148 | MS.gene63836:intron | 50.0% | |
| TGCTAGGAACCAATGTAGCC+AGG | - | chr5.1:75189737-75189756 | MS.gene63836:CDS | 50.0% | |
| TGGCTATGTTGTATGGAGCG+GGG | - | chr5.1:75187471-75187490 | MS.gene63836:intron | 50.0% | |
| TGGGACCCGCATAATTTGGT+GGG | + | chr5.1:75190137-75190156 | None:intergenic | 50.0% | |
| TTACCCTGCAGGAAGTCAAC+AGG | - | chr5.1:75190542-75190561 | MS.gene63836:intron | 50.0% | |
| TTCATAACAGCTGGGATGGG+TGG | - | chr5.1:75188448-75188467 | MS.gene63836:intron | 50.0% | |
| TTGTAGTCAGGATCGAGTGC+TGG | + | chr5.1:75190048-75190067 | None:intergenic | 50.0% | |
| ! | ACTTTTGGGCGAACAAGCTG+CGG | - | chr5.1:75188375-75188394 | MS.gene63836:intron | 50.0% |
| ! | ATTGGAGAGCTTCTGACTCG+TGG | - | chr5.1:75188219-75188238 | MS.gene63836:intron | 50.0% |
| ! | GAGCTTCTGACTCGTGGATT+AGG | - | chr5.1:75188225-75188244 | MS.gene63836:intron | 50.0% |
| ! | GGAAGTCAACAGGGTATCTC+AGG | - | chr5.1:75190552-75190571 | MS.gene63836:intron | 50.0% |
| ! | GTTCTGCTGCTTCTTCTGCT+CGG | + | chr5.1:75190441-75190460 | None:intergenic | 50.0% |
| ! | TACTGGCGGGAATCCACTTT+TGG | - | chr5.1:75188360-75188379 | MS.gene63836:intron | 50.0% |
| !! | ACTGGCGGGAATCCACTTTT+GGG | - | chr5.1:75188361-75188380 | MS.gene63836:intron | 50.0% |
| !! | AGACGAAAAGCATCCTGGAG+TGG | + | chr5.1:75188805-75188824 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGCCTT+AGG | - | chr5.1:75187644-75187663 | MS.gene63836:intron | 50.0% |
| !! | ATACCCTGTTGACTTCCTGC+AGG | + | chr5.1:75190549-75190568 | None:intergenic | 50.0% |
| !! | ATAGTGATGCAGGTACTGGC+GGG | - | chr5.1:75188347-75188366 | MS.gene63836:intron | 50.0% |
| !! | CTGCAAGACGAAAAGCATCC+TGG | + | chr5.1:75188810-75188829 | None:intergenic | 50.0% |
| !! | GATAGTGATGCAGGTACTGG+CGG | - | chr5.1:75188346-75188365 | MS.gene63836:intron | 50.0% |
| !! | TACCCTGTTGACTTCCTGCA+GGG | + | chr5.1:75190548-75190567 | None:intergenic | 50.0% |
| AAGGTCGTTGGAATTGGGGG+TGG | - | chr5.1:75187167-75187186 | MS.gene63836:CDS | 55.0% | |
| ACCCTCGAGTTTGACAACCC+TGG | - | chr5.1:75190301-75190320 | MS.gene63836:intron | 55.0% | |
| AGAGGCAGGTTACTTGACCG+TGG | - | chr5.1:75188516-75188535 | MS.gene63836:intron | 55.0% | |
| AGTAGGAACACCTGCCTGCA+AGG | + | chr5.1:75188584-75188603 | None:intergenic | 55.0% | |
| ATAACAGCTGGGATGGGTGG+GGG | - | chr5.1:75188451-75188470 | MS.gene63836:intron | 55.0% | |
| CACGTGACTATCATCGCCAC+TGG | - | chr5.1:75191119-75191138 | MS.gene63836:CDS | 55.0% | |
| CATAACAGCTGGGATGGGTG+GGG | - | chr5.1:75188450-75188469 | MS.gene63836:intron | 55.0% | |
| CTCGGAGTAGGTGTTTCCTC+TGG | - | chr5.1:75190409-75190428 | MS.gene63836:intron | 55.0% | |
| GAGGCAGGTTACTTGACCGT+GGG | - | chr5.1:75188517-75188536 | MS.gene63836:intron | 55.0% | |
| GCAAAGTCGAAGCACGACTG+AGG | - | chr5.1:75189988-75190007 | MS.gene63836:intron | 55.0% | |
| GCTTCTTGACAAAGTGGCCG+AGG | - | chr5.1:75191193-75191212 | MS.gene63836:CDS | 55.0% | |
| GGTACTGCAATGCTCGGAGT+AGG | - | chr5.1:75190397-75190416 | MS.gene63836:intron | 55.0% | |
| GTCGTGCTTCGACTTTGCTC+AGG | + | chr5.1:75189986-75190005 | None:intergenic | 55.0% | |
| GTGGGACCCGCATAATTTGG+TGG | + | chr5.1:75190138-75190157 | None:intergenic | 55.0% | |
| GTTTGAGGACTTGAGGGGAG+CGG | + | chr5.1:75191240-75191259 | None:intergenic | 55.0% | |
| TTTGAGGACTTGAGGGGAGC+GGG | + | chr5.1:75191239-75191258 | None:intergenic | 55.0% | |
| ! | GCAGCTTGTTCGCCCAAAAG+TGG | + | chr5.1:75188376-75188395 | None:intergenic | 55.0% |
| !! | GTATGGAGCGGGGTATTGAG+CGG | - | chr5.1:75187481-75187500 | MS.gene63836:intron | 55.0% |
| !! | TGGTGGAAACTGGCCTTAGG+TGG | - | chr5.1:75187647-75187666 | MS.gene63836:intron | 55.0% |
| AAGCACGACTGAGGTGCGGT+GGG | - | chr5.1:75189997-75190016 | MS.gene63836:intron | 60.0% | |
| GTCGAAGCACGACTGAGGTG+CGG | - | chr5.1:75189993-75190012 | MS.gene63836:intron | 60.0% | |
| GTCGTTGGAATTGGGGGTGG+TGG | - | chr5.1:75187170-75187189 | MS.gene63836:CDS | 60.0% | |
| TGACGAGCAGATGCCACTCC+AGG | - | chr5.1:75188789-75188808 | MS.gene63836:intron | 60.0% | |
| TTTGGGCGAACAAGCTGCGG+AGG | - | chr5.1:75188378-75188397 | MS.gene63836:intron | 60.0% | |
| ACTGAGGTGCGGTGGGACGT+AGG | - | chr5.1:75190004-75190023 | MS.gene63836:intron | 65.0% | |
| AGCCACAACTGGGGCAGCAC+CGG | + | chr5.1:75188485-75188504 | None:intergenic | 65.0% | |
| GAAGCACGACTGAGGTGCGG+TGG | - | chr5.1:75189996-75190015 | MS.gene63836:intron | 65.0% | |
| ! | ATGGGTGGGGGTACAGGGTC+CGG | - | chr5.1:75188463-75188482 | MS.gene63836:intron | 65.0% |
| ! | CTGGGATGGGTGGGGGTACA+GGG | - | chr5.1:75188458-75188477 | MS.gene63836:intron | 65.0% |
| ! | GCTGGGATGGGTGGGGGTAC+AGG | - | chr5.1:75188457-75188476 | MS.gene63836:intron | 70.0% |
| !! | GTCCGGTGCTGCCCCAGTTG+TGG | - | chr5.1:75188480-75188499 | MS.gene63836:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 75186981 | 75191313 | 75186981 | ID=MS.gene63836 |
| chr5.1 | mRNA | 75186981 | 75191313 | 75186981 | ID=MS.gene63836.t1;Parent=MS.gene63836 |
| chr5.1 | exon | 75191062 | 75191313 | 75191062 | ID=MS.gene63836.t1.exon1;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75191062 | 75191313 | 75191062 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| chr5.1 | exon | 75190048 | 75190147 | 75190048 | ID=MS.gene63836.t1.exon2;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75190048 | 75190147 | 75190048 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| chr5.1 | exon | 75189706 | 75189935 | 75189706 | ID=MS.gene63836.t1.exon3;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75189706 | 75189935 | 75189706 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| chr5.1 | exon | 75189418 | 75189585 | 75189418 | ID=MS.gene63836.t1.exon4;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75189418 | 75189585 | 75189418 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| chr5.1 | exon | 75187721 | 75187954 | 75187721 | ID=MS.gene63836.t1.exon5;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75187721 | 75187954 | 75187721 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| chr5.1 | exon | 75186981 | 75187253 | 75186981 | ID=MS.gene63836.t1.exon6;Parent=MS.gene63836.t1 |
| chr5.1 | CDS | 75186981 | 75187253 | 75186981 | ID=cds.MS.gene63836.t1;Parent=MS.gene63836.t1 |
| Gene Sequence |
| Protein sequence |
