Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63903.t1 | XP_003617748.1 | 88.8 | 313 | 35 | 0 | 7 | 319 | 1 | 313 | 1.60E-112 | 416 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63903.t1 | Q5NCR9 | 41.2 | 165 | 92 | 4 | 62 | 224 | 62 | 223 | 1.8e-11 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63903.t1 | B7FNC6 | 88.8 | 313 | 35 | 0 | 7 | 319 | 1 | 313 | 1.1e-112 | 416.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057055 | MS.gene63903 | 0.879248 | 1.45E-69 | -1.69E-46 |
| MS.gene057056 | MS.gene63903 | 0.94773 | 3.81E-106 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTTCTGAATCAGGTTT+TGG | 0.253915 | 5.3:+77229973 | None:intergenic |
| ATCATCTTTGCTTCTCTCCT+TGG | 0.304596 | 5.3:+77229905 | None:intergenic |
| TCTGCAGAAGCATCGGGATT+TGG | 0.314331 | 5.3:+77229248 | None:intergenic |
| TGCTGCTGATTTGATGCATC+AGG | 0.317421 | 5.3:+77229407 | None:intergenic |
| CTCATTCCCTCACGTTTCTC+TGG | 0.342667 | 5.3:+77229431 | None:intergenic |
| GGCCTCGGTGGTTGCTTCTT+CGG | 0.365460 | 5.3:+77230761 | None:intergenic |
| TGTAACATATTTGTCTTTGT+CGG | 0.367853 | 5.3:+77229872 | None:intergenic |
| GAAGCTGGTGGCTTCTCAAC+TGG | 0.367854 | 5.3:+77229215 | None:intergenic |
| CCGCTTCAAATGAACAAGTA+TGG | 0.396751 | 5.3:-77230806 | MS.gene63903:CDS |
| GACTCCGTCATAATCAAATA+TGG | 0.404782 | 5.3:+77230490 | None:intergenic |
| GGTTGCTTCTTCGGCTTCGC+AGG | 0.425435 | 5.3:+77230770 | None:intergenic |
| ACAAGTATGGCTTGAACCTT+AGG | 0.429919 | 5.3:-77230793 | MS.gene63903:CDS |
| TTTCTCTGGAACTCTATTCT+CGG | 0.444819 | 5.3:+77229445 | None:intergenic |
| TCAGGATTTGGTTGTGAAGC+TGG | 0.459984 | 5.3:+77229200 | None:intergenic |
| AGGGGAGAAAACGTGACAAT+CGG | 0.466476 | 5.3:-77229469 | MS.gene63903:CDS |
| TCTTCGGCTTCGCAGGCCTA+AGG | 0.474287 | 5.3:+77230777 | None:intergenic |
| CCGAGGGCAATGGACGGCCT+CGG | 0.490294 | 5.3:+77230746 | None:intergenic |
| TTCATTAAAGCCGAGGGCAA+TGG | 0.490951 | 5.3:+77230736 | None:intergenic |
| AGTTCACCAGAAGAGTCTCC+AGG | 0.503593 | 5.3:-77229341 | MS.gene63903:CDS |
| GGGGAGAAAACGTGACAATC+GGG | 0.504890 | 5.3:-77229468 | MS.gene63903:CDS |
| TCTTCGCGATCTTGTATCAA+TGG | 0.506015 | 5.3:+77230437 | None:intergenic |
| TAATAGAAGTGCCAGTCCCT+TGG | 0.509927 | 5.3:-77229279 | MS.gene63903:CDS |
| ACAAGATCGCGAAGAGAGAA+AGG | 0.511139 | 5.3:-77230429 | MS.gene63903:intron |
| CCATACTTGTTCATTTGAAG+CGG | 0.523653 | 5.3:+77230806 | None:intergenic |
| ACGTATACGCGAACTTCAAG+AGG | 0.525424 | 5.3:-77229799 | MS.gene63903:CDS |
| GGAGCAGCAAAGAAAAGCCT+TGG | 0.526026 | 5.3:-77230525 | MS.gene63903:CDS |
| TGATGCATCAAATCAGCAGC+AGG | 0.545607 | 5.3:-77229405 | MS.gene63903:CDS |
| TGCATAGGTTACGAAGAAGA+AGG | 0.547399 | 5.3:-77229555 | MS.gene63903:intron |
| TGGCTTCATAGCCAAGGGAC+TGG | 0.560491 | 5.3:+77229268 | None:intergenic |
| CATCATCTTCATTAAAGCCG+AGG | 0.561447 | 5.3:+77230729 | None:intergenic |
| ATCATCTTCATTAAAGCCGA+GGG | 0.562099 | 5.3:+77230730 | None:intergenic |
| GGATTTGGTTGTGAAGCTGG+TGG | 0.565744 | 5.3:+77229203 | None:intergenic |
| CCGAGGCCGTCCATTGCCCT+CGG | 0.571438 | 5.3:-77230746 | MS.gene63903:CDS |
| GGGATTTGGCTTCATAGCCA+AGG | 0.575475 | 5.3:+77229262 | None:intergenic |
| TAGCAAGAGTAAAAGTCTCA+AGG | 0.575504 | 5.3:-77230672 | MS.gene63903:CDS |
| GCTGCTGATTTGATGCATCA+GGG | 0.575527 | 5.3:+77229408 | None:intergenic |
| GGATTTGGCTTCATAGCCAA+GGG | 0.576616 | 5.3:+77229263 | None:intergenic |
| TATGGTCGGATCTTCTTCCA+AGG | 0.578834 | 5.3:+77230508 | None:intergenic |
| AGGGCAATGGACGGCCTCGG+TGG | 0.589223 | 5.3:+77230749 | None:intergenic |
| CCGACCATATTTGATTATGA+CGG | 0.590424 | 5.3:-77230494 | MS.gene63903:CDS |
| AGATGAAGAGCAACATTCGT+TGG | 0.592495 | 5.3:-77229372 | MS.gene63903:CDS |
| TTTGGTGCAAAAGATGCTCA+GGG | 0.602366 | 5.3:-77229488 | MS.gene63903:CDS |
| CAAAAGAAGTCAAGATGCTG+TGG | 0.604246 | 5.3:-77229171 | MS.gene63903:CDS |
| ATTTGTCTTTGTCGGCAAAG+AGG | 0.614244 | 5.3:+77229880 | None:intergenic |
| CCGTCATAATCAAATATGGT+CGG | 0.619416 | 5.3:+77230494 | None:intergenic |
| CGAACTTCAAGAGGAAAGAG+AGG | 0.624167 | 5.3:-77229790 | MS.gene63903:CDS |
| TGCTGAACGAGAGAAACAGA+TGG | 0.626499 | 5.3:-77229829 | MS.gene63903:CDS |
| TAGAGTTCCAGAGAAACGTG+AGG | 0.630094 | 5.3:-77229438 | MS.gene63903:CDS |
| AAATCCCGATGCTTCTGCAG+AGG | 0.635355 | 5.3:-77229246 | MS.gene63903:CDS |
| GCATCAAATCAGCAGCAGGA+TGG | 0.636667 | 5.3:-77229401 | MS.gene63903:CDS |
| GTTCACCAGAAGAGTCTCCA+GGG | 0.644434 | 5.3:-77229340 | MS.gene63903:CDS |
| AGAGTTCCAGAGAAACGTGA+GGG | 0.653129 | 5.3:-77229437 | MS.gene63903:CDS |
| TTAAAGCCGAGGGCAATGGA+CGG | 0.661471 | 5.3:+77230740 | None:intergenic |
| AGCCGAAGAAGCAACCACCG+AGG | 0.687950 | 5.3:-77230763 | MS.gene63903:CDS |
| TTGGTGCAAAAGATGCTCAG+GGG | 0.730452 | 5.3:-77229487 | MS.gene63903:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATTAAACAAAATTAT+TGG | + | chr5.3:77229835-77229854 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAAAAAACCAAA+TGG | + | chr5.3:77229369-77229388 | None:intergenic | 15.0% |
| !! | ATTAAACAAAATTATTGGAA+AGG | + | chr5.3:77229830-77229849 | None:intergenic | 15.0% |
| !!! | ATTTAAAATAGTGTTTTCAT+TGG | - | chr5.3:77229754-77229773 | MS.gene63903:intron | 15.0% |
| !!! | GATTTTCATGTATTTTAAAA+TGG | - | chr5.3:77230244-77230263 | MS.gene63903:intron | 15.0% |
| !!! | GTTTTTTATTTTACTTTCTT+GGG | - | chr5.3:77229852-77229871 | MS.gene63903:CDS | 15.0% |
| !!! | TGTTTTTTATTTTACTTTCT+TGG | - | chr5.3:77229851-77229870 | MS.gene63903:CDS | 15.0% |
| !!! | TTGTTTTTAATTATTTGCAT+AGG | - | chr5.3:77230368-77230387 | MS.gene63903:intron | 15.0% |
| !!! | TTTTAAAATACATGAAAATC+AGG | + | chr5.3:77230244-77230263 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTTACTTTCTTG+GGG | - | chr5.3:77229853-77229872 | MS.gene63903:CDS | 15.0% |
| !! | AAATTAACTGAAAAAGTTGA+GGG | + | chr5.3:77230292-77230311 | None:intergenic | 20.0% |
| !! | AATGAATTACTGAAAAAAAC+AGG | + | chr5.3:77230183-77230202 | None:intergenic | 20.0% |
| !! | ATGTCAGTAATTCAAAATAT+AGG | + | chr5.3:77230345-77230364 | None:intergenic | 20.0% |
| !! | CTCATAATTATGATGAAATT+TGG | + | chr5.3:77229631-77229650 | None:intergenic | 20.0% |
| !! | GTAATTCAAAATATAGGTAT+AGG | + | chr5.3:77230339-77230358 | None:intergenic | 20.0% |
| !!! | TTTTTATTTTACTTTCTTGG+GGG | - | chr5.3:77229854-77229873 | MS.gene63903:CDS | 20.0% |
| !!! | TTTTTTCTTTCCCTTATTTA+AGG | - | chr5.3:77229386-77229405 | MS.gene63903:CDS | 20.0% |
| ! | ATATTCACATACTTACATGA+TGG | - | chr5.3:77229677-77229696 | MS.gene63903:intron | 25.0% |
| ! | CAAATTAACTGAAAAAGTTG+AGG | + | chr5.3:77230293-77230312 | None:intergenic | 25.0% |
| ! | TAATTTGGTATGCTTGTTTA+TGG | - | chr5.3:77230306-77230325 | MS.gene63903:intron | 25.0% |
| ! | TGTAACATATTTGTCTTTGT+CGG | + | chr5.3:77230069-77230088 | None:intergenic | 25.0% |
| ! | TTATGATCTAACTTTCCATT+TGG | - | chr5.3:77229351-77229370 | MS.gene63903:CDS | 25.0% |
| !! | CAAAAGCAACATTTTTATCA+AGG | + | chr5.3:77230434-77230453 | None:intergenic | 25.0% |
| !!! | ATCAGGTTTTGGATATATTT+TGG | + | chr5.3:77229957-77229976 | None:intergenic | 25.0% |
| !!! | CTCAACTTTTTCAGTTAATT+TGG | - | chr5.3:77230291-77230310 | MS.gene63903:intron | 25.0% |
| !!! | CTTGATAAAAATGTTGCTTT+TGG | - | chr5.3:77230432-77230451 | MS.gene63903:CDS | 25.0% |
| !!! | GTAAACCTTACATTTTAATC+TGG | - | chr5.3:77229295-77229314 | MS.gene63903:CDS | 25.0% |
| !!! | TGTGTTCATTTTGGTTAATT+TGG | - | chr5.3:77229889-77229908 | MS.gene63903:CDS | 25.0% |
| ATATGAGAAAAAGATTGCCA+AGG | - | chr5.3:77230016-77230035 | MS.gene63903:intron | 30.0% | |
| TATGCACTTTCATATTGCAA+AGG | + | chr5.3:77229660-77229679 | None:intergenic | 30.0% | |
| TGAAAAAGAAATTGCTATCC+AGG | - | chr5.3:77229242-77229261 | MS.gene63903:CDS | 30.0% | |
| ! | AAGATACAGTCAATTTTCCT+AGG | + | chr5.3:77229705-77229724 | None:intergenic | 30.0% |
| ! | ATGCTGAAATGTGTTCATTT+TGG | - | chr5.3:77229880-77229899 | MS.gene63903:CDS | 30.0% |
| !! | AACCTTACATTTTAATCTGG+TGG | - | chr5.3:77229298-77229317 | MS.gene63903:CDS | 30.0% |
| !!! | TGTTTTCATTGGTTTAGAGA+AGG | - | chr5.3:77229765-77229784 | MS.gene63903:intron | 30.0% |
| AAAAGTTGAGGGAGAAAGAA+AGG | + | chr5.3:77230281-77230300 | None:intergenic | 35.0% | |
| AGCCACCAGATTAAAATGTA+AGG | + | chr5.3:77229303-77229322 | None:intergenic | 35.0% | |
| AGCTCAGTAGAGAATCATAA+CGG | - | chr5.3:77229595-77229614 | MS.gene63903:intron | 35.0% | |
| ATCATCTTCATTAAAGCCGA+GGG | + | chr5.3:77229211-77229230 | None:intergenic | 35.0% | |
| CCATACTTGTTCATTTGAAG+CGG | + | chr5.3:77229135-77229154 | None:intergenic | 35.0% | |
| CCGACCATATTTGATTATGA+CGG | - | chr5.3:77229444-77229463 | MS.gene63903:CDS | 35.0% | |
| CCGTCATAATCAAATATGGT+CGG | + | chr5.3:77229447-77229466 | None:intergenic | 35.0% | |
| GACTCCGTCATAATCAAATA+TGG | + | chr5.3:77229451-77229470 | None:intergenic | 35.0% | |
| TAGCAAGAGTAAAAGTCTCA+AGG | - | chr5.3:77229266-77229285 | MS.gene63903:CDS | 35.0% | |
| TGCTCCTCAACCTTAAATAA+GGG | + | chr5.3:77229399-77229418 | None:intergenic | 35.0% | |
| ! | CTTTCCCTTATTTAAGGTTG+AGG | - | chr5.3:77229392-77229411 | MS.gene63903:CDS | 35.0% |
| ! | TTGCTTTCTGAATCAGGTTT+TGG | + | chr5.3:77229968-77229987 | None:intergenic | 35.0% |
| !! | ATACTTACATGATGGATCCT+AGG | - | chr5.3:77229685-77229704 | MS.gene63903:intron | 35.0% |
| !! | TTTCTCTGGAACTCTATTCT+CGG | + | chr5.3:77230496-77230515 | None:intergenic | 35.0% |
| ACAAGTATGGCTTGAACCTT+AGG | - | chr5.3:77229145-77229164 | MS.gene63903:CDS | 40.0% | |
| AGATGAAGAGCAACATTCGT+TGG | - | chr5.3:77230566-77230585 | MS.gene63903:intron | 40.0% | |
| ATCATCTTTGCTTCTCTCCT+TGG | + | chr5.3:77230036-77230055 | None:intergenic | 40.0% | |
| ATTTGTCTTTGTCGGCAAAG+AGG | + | chr5.3:77230061-77230080 | None:intergenic | 40.0% | |
| CAAAAGAAGTCAAGATGCTG+TGG | - | chr5.3:77230767-77230786 | MS.gene63903:CDS | 40.0% | |
| CATCATCTTCATTAAAGCCG+AGG | + | chr5.3:77229212-77229231 | None:intergenic | 40.0% | |
| CCGCTTCAAATGAACAAGTA+TGG | - | chr5.3:77229132-77229151 | MS.gene63903:CDS | 40.0% | |
| CTGCTCCTCAACCTTAAATA+AGG | + | chr5.3:77229400-77229419 | None:intergenic | 40.0% | |
| TCTTCGCGATCTTGTATCAA+TGG | + | chr5.3:77229504-77229523 | None:intergenic | 40.0% | |
| TGCATAGGTTACGAAGAAGA+AGG | - | chr5.3:77230383-77230402 | MS.gene63903:intron | 40.0% | |
| ! | AGGGAAAAAGATTGGTGATC+AGG | - | chr5.3:77230617-77230636 | MS.gene63903:intron | 40.0% |
| ! | CTTTTGTGATGCTCAGGATT+TGG | + | chr5.3:77230753-77230772 | None:intergenic | 40.0% |
| ! | GCTCTTTTGCTTTCTGAATC+AGG | + | chr5.3:77229974-77229993 | None:intergenic | 40.0% |
| ! | GGGAAAAAGATTGGTGATCA+GGG | - | chr5.3:77230618-77230637 | MS.gene63903:intron | 40.0% |
| ! | TGACTTCTTTTGTGATGCTC+AGG | + | chr5.3:77230759-77230778 | None:intergenic | 40.0% |
| ! | TGATCACCAATCTTTTTCCC+TGG | + | chr5.3:77230618-77230637 | None:intergenic | 40.0% |
| ! | TGCAGCAAAAGAACGTTTTC+TGG | - | chr5.3:77230791-77230810 | MS.gene63903:CDS | 40.0% |
| ! | TTTGGTGCAAAAGATGCTCA+GGG | - | chr5.3:77230450-77230469 | MS.gene63903:CDS | 40.0% |
| !! | TTTTGGTGCAAAAGATGCTC+AGG | - | chr5.3:77230449-77230468 | MS.gene63903:CDS | 40.0% |
| ACAAGATCGCGAAGAGAGAA+AGG | - | chr5.3:77229509-77229528 | MS.gene63903:CDS | 45.0% | |
| ACGTATACGCGAACTTCAAG+AGG | - | chr5.3:77230139-77230158 | MS.gene63903:intron | 45.0% | |
| AGAGTTCCAGAGAAACGTGA+GGG | - | chr5.3:77230501-77230520 | MS.gene63903:CDS | 45.0% | |
| AGGGGAGAAAACGTGACAAT+CGG | - | chr5.3:77230469-77230488 | MS.gene63903:CDS | 45.0% | |
| ATCGCGAAGAGAGAAAGGTA+TGG | - | chr5.3:77229514-77229533 | MS.gene63903:CDS | 45.0% | |
| CGAACTTCAAGAGGAAAGAG+AGG | - | chr5.3:77230148-77230167 | MS.gene63903:intron | 45.0% | |
| GAGTCTCCAGGGAAAAAGAT+TGG | - | chr5.3:77230609-77230628 | MS.gene63903:intron | 45.0% | |
| TAGAGTTCCAGAGAAACGTG+AGG | - | chr5.3:77230500-77230519 | MS.gene63903:CDS | 45.0% | |
| TATGGTCGGATCTTCTTCCA+AGG | + | chr5.3:77229433-77229452 | None:intergenic | 45.0% | |
| TGATGCATCAAATCAGCAGC+AGG | - | chr5.3:77230533-77230552 | MS.gene63903:CDS | 45.0% | |
| TGCTGAACGAGAGAAACAGA+TGG | - | chr5.3:77230109-77230128 | MS.gene63903:intron | 45.0% | |
| TTCATTAAAGCCGAGGGCAA+TGG | + | chr5.3:77229205-77229224 | None:intergenic | 45.0% | |
| TTGGTGCAAAAGATGCTCAG+GGG | - | chr5.3:77230451-77230470 | MS.gene63903:CDS | 45.0% | |
| ! | GACTTTTACTCTTGCTAGCC+TGG | + | chr5.3:77229263-77229282 | None:intergenic | 45.0% |
| ! | GGATTTGGCTTCATAGCCAA+GGG | + | chr5.3:77230678-77230697 | None:intergenic | 45.0% |
| ! | TCAGGATTTGGTTGTGAAGC+TGG | + | chr5.3:77230741-77230760 | None:intergenic | 45.0% |
| ! | TTTTTCCCTGGAGACTCTTC+TGG | + | chr5.3:77230606-77230625 | None:intergenic | 45.0% |
| !! | CTTTTCCTCTGCAGAAGCAT+CGG | + | chr5.3:77230700-77230719 | None:intergenic | 45.0% |
| !! | GCTGCTGATTTGATGCATCA+GGG | + | chr5.3:77230533-77230552 | None:intergenic | 45.0% |
| !! | TAATAGAAGTGCCAGTCCCT+TGG | - | chr5.3:77230659-77230678 | MS.gene63903:intron | 45.0% |
| !! | TGCTGCTGATTTGATGCATC+AGG | + | chr5.3:77230534-77230553 | None:intergenic | 45.0% |
| !!! | TTTTCCTCTGCAGAAGCATC+GGG | + | chr5.3:77230699-77230718 | None:intergenic | 45.0% |
| AAATCCCGATGCTTCTGCAG+AGG | - | chr5.3:77230692-77230711 | MS.gene63903:CDS | 50.0% | |
| AGTTCACCAGAAGAGTCTCC+AGG | - | chr5.3:77230597-77230616 | MS.gene63903:intron | 50.0% | |
| CTCATTCCCTCACGTTTCTC+TGG | + | chr5.3:77230510-77230529 | None:intergenic | 50.0% | |
| GCATCAAATCAGCAGCAGGA+TGG | - | chr5.3:77230537-77230556 | MS.gene63903:intron | 50.0% | |
| GGAGCAGCAAAGAAAAGCCT+TGG | - | chr5.3:77229413-77229432 | MS.gene63903:CDS | 50.0% | |
| GGGGAGAAAACGTGACAATC+GGG | - | chr5.3:77230470-77230489 | MS.gene63903:CDS | 50.0% | |
| GTTCACCAGAAGAGTCTCCA+GGG | - | chr5.3:77230598-77230617 | MS.gene63903:intron | 50.0% | |
| TTAAAGCCGAGGGCAATGGA+CGG | + | chr5.3:77229201-77229220 | None:intergenic | 50.0% | |
| ! | GGATTTGGTTGTGAAGCTGG+TGG | + | chr5.3:77230738-77230757 | None:intergenic | 50.0% |
| ! | GGGATTTGGCTTCATAGCCA+AGG | + | chr5.3:77230679-77230698 | None:intergenic | 50.0% |
| !! | TCTGCAGAAGCATCGGGATT+TGG | + | chr5.3:77230693-77230712 | None:intergenic | 50.0% |
| GAAGCTGGTGGCTTCTCAAC+TGG | + | chr5.3:77230726-77230745 | None:intergenic | 55.0% | |
| TGGCTTCATAGCCAAGGGAC+TGG | + | chr5.3:77230673-77230692 | None:intergenic | 55.0% | |
| AGCCGAAGAAGCAACCACCG+AGG | - | chr5.3:77229175-77229194 | MS.gene63903:CDS | 60.0% | |
| GGCCTCGGTGGTTGCTTCTT+CGG | + | chr5.3:77229180-77229199 | None:intergenic | 60.0% | |
| GGTTGCTTCTTCGGCTTCGC+AGG | + | chr5.3:77229171-77229190 | None:intergenic | 60.0% | |
| TCTTCGGCTTCGCAGGCCTA+AGG | + | chr5.3:77229164-77229183 | None:intergenic | 60.0% | |
| AGGGCAATGGACGGCCTCGG+TGG | + | chr5.3:77229192-77229211 | None:intergenic | 70.0% | |
| CCGAGGCCGTCCATTGCCCT+CGG | - | chr5.3:77229192-77229211 | MS.gene63903:CDS | 70.0% | |
| CCGAGGGCAATGGACGGCCT+CGG | + | chr5.3:77229195-77229214 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 77229121 | 77230839 | 77229121 | ID=MS.gene63903 |
| chr5.3 | mRNA | 77229121 | 77230839 | 77229121 | ID=MS.gene63903.t1;Parent=MS.gene63903 |
| chr5.3 | exon | 77230670 | 77230839 | 77230670 | ID=MS.gene63903.t1.exon1;Parent=MS.gene63903.t1 |
| chr5.3 | CDS | 77230670 | 77230839 | 77230670 | ID=cds.MS.gene63903.t1;Parent=MS.gene63903.t1 |
| chr5.3 | exon | 77230430 | 77230552 | 77230430 | ID=MS.gene63903.t1.exon2;Parent=MS.gene63903.t1 |
| chr5.3 | CDS | 77230430 | 77230552 | 77230430 | ID=cds.MS.gene63903.t1;Parent=MS.gene63903.t1 |
| chr5.3 | exon | 77229788 | 77230006 | 77229788 | ID=MS.gene63903.t1.exon3;Parent=MS.gene63903.t1 |
| chr5.3 | CDS | 77229788 | 77230006 | 77229788 | ID=cds.MS.gene63903.t1;Parent=MS.gene63903.t1 |
| chr5.3 | exon | 77229121 | 77229570 | 77229121 | ID=MS.gene63903.t1.exon4;Parent=MS.gene63903.t1 |
| chr5.3 | CDS | 77229121 | 77229570 | 77229121 | ID=cds.MS.gene63903.t1;Parent=MS.gene63903.t1 |
| Gene Sequence |
| Protein sequence |
