Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63904.t1 | XP_003617748.1 | 89.1 | 313 | 34 | 0 | 1 | 313 | 1 | 313 | 1.80E-113 | 419.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63904.t1 | Q5NCR9 | 41.2 | 165 | 92 | 4 | 56 | 218 | 62 | 223 | 1.7e-11 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63904.t1 | B7FNC6 | 89.1 | 313 | 34 | 0 | 1 | 313 | 1 | 313 | 1.3e-113 | 419.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057055 | MS.gene63904 | 0.829007 | 6.55E-55 | -1.69E-46 |
| MS.gene057056 | MS.gene63904 | 0.95486 | 1.14E-112 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63904.t1 | MTR_5g095010 | 98.083 | 313 | 6 | 0 | 1 | 313 | 1 | 313 | 0.0 | 616 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63904.t1 | AT2G27285 | 47.368 | 323 | 150 | 7 | 1 | 311 | 1 | 315 | 1.03e-75 | 235 |
| MS.gene63904.t1 | AT2G27280 | 45.768 | 319 | 129 | 10 | 1 | 311 | 142 | 424 | 2.60e-61 | 201 |
| MS.gene63904.t1 | AT1G55928 | 52.968 | 219 | 95 | 6 | 1 | 214 | 12 | 227 | 1.74e-52 | 174 |
Find 54 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTTCTGAATCAGGTTT+TGG | 0.253915 | 5.1:-76032550 | None:intergenic |
| ATCATCTTTGCTTCTCTCCT+TGG | 0.304596 | 5.1:-76032618 | None:intergenic |
| TCTGCAGAAGCATCGGGATT+TGG | 0.314331 | 5.1:-76033275 | None:intergenic |
| TGCTGCTGATTTGATGCATC+AGG | 0.317421 | 5.1:-76033116 | None:intergenic |
| CTCATTCCCTCACGTTTCTC+TGG | 0.342667 | 5.1:-76033092 | None:intergenic |
| GGCCTCGGTGGTTGCTTCTT+CGG | 0.365460 | 5.1:-76031762 | None:intergenic |
| TGTAACATATTTGTCTTTGT+CGG | 0.367853 | 5.1:-76032651 | None:intergenic |
| GAAGCTGGTGGCTTCTCAAC+TGG | 0.367854 | 5.1:-76033308 | None:intergenic |
| CCGCTTCAAATGAACAAGTA+TGG | 0.396751 | 5.1:+76031717 | None:intergenic |
| GACTCCGTCATAATCAAATA+TGG | 0.404782 | 5.1:-76032033 | None:intergenic |
| GGTTGCTTCTTCGGCTTCGC+AGG | 0.425435 | 5.1:-76031753 | None:intergenic |
| ACAAGTATGGCTTGAACCTT+AGG | 0.429919 | 5.1:+76031730 | MS.gene63904:CDS |
| TTTCTCTGGAACTCTATTCT+CGG | 0.444819 | 5.1:-76033078 | None:intergenic |
| TCAGGATTTGGTTGTGAAGC+TGG | 0.459984 | 5.1:-76033323 | None:intergenic |
| AGGGGAGAAAACGTGACAAT+CGG | 0.466476 | 5.1:+76033054 | MS.gene63904:CDS |
| TCTTCGGCTTCGCAGGCCTA+AGG | 0.474287 | 5.1:-76031746 | None:intergenic |
| CCGAGGGCAATGGACGGCCT+CGG | 0.490294 | 5.1:-76031777 | None:intergenic |
| TTCATTAAAGCCGAGGGCAA+TGG | 0.490951 | 5.1:-76031787 | None:intergenic |
| AGTTCACCAGAAGAGTCTCC+AGG | 0.503593 | 5.1:+76033182 | MS.gene63904:CDS |
| GGGGAGAAAACGTGACAATC+GGG | 0.504890 | 5.1:+76033055 | MS.gene63904:CDS |
| TCTTCGCGATCTTGTATCAA+TGG | 0.506015 | 5.1:-76032086 | None:intergenic |
| TAATAGAAGTGCCAGTCCCT+TGG | 0.509927 | 5.1:+76033244 | MS.gene63904:CDS |
| ACAAGATCGCGAAGAGAGAA+AGG | 0.511139 | 5.1:+76032094 | MS.gene63904:CDS |
| ACGTATACGCGAACTTCAAG+AGG | 0.525424 | 5.1:+76032724 | MS.gene63904:CDS |
| GGAGCAGCAAAGAAAAGCCT+TGG | 0.526026 | 5.1:+76031998 | MS.gene63904:CDS |
| TGATGCATCAAATCAGCAGC+AGG | 0.545607 | 5.1:+76033118 | MS.gene63904:CDS |
| TGCATAGGTTACGAAGAAGA+AGG | 0.547399 | 5.1:+76032968 | MS.gene63904:intron |
| TGGCTTCATAGCCAAGGGAC+TGG | 0.560491 | 5.1:-76033255 | None:intergenic |
| CATCATCTTCATTAAAGCCG+AGG | 0.561447 | 5.1:-76031794 | None:intergenic |
| ATCATCTTCATTAAAGCCGA+GGG | 0.562099 | 5.1:-76031793 | None:intergenic |
| GGATTTGGTTGTGAAGCTGG+TGG | 0.565744 | 5.1:-76033320 | None:intergenic |
| CCGAGGCCGTCCATTGCCCT+CGG | 0.571438 | 5.1:+76031777 | MS.gene63904:CDS |
| GGGATTTGGCTTCATAGCCA+AGG | 0.575475 | 5.1:-76033261 | None:intergenic |
| TAGCAAGAGTAAAAGTCTCA+AGG | 0.575504 | 5.1:+76031851 | MS.gene63904:CDS |
| GCTGCTGATTTGATGCATCA+GGG | 0.575527 | 5.1:-76033115 | None:intergenic |
| GGATTTGGCTTCATAGCCAA+GGG | 0.576616 | 5.1:-76033260 | None:intergenic |
| TATGGTCGGATCTTCTTCCA+AGG | 0.578834 | 5.1:-76032015 | None:intergenic |
| AGGGCAATGGACGGCCTCGG+TGG | 0.589223 | 5.1:-76031774 | None:intergenic |
| CCGACCATATTTGATTATGA+CGG | 0.590424 | 5.1:+76032029 | MS.gene63904:CDS |
| AGATGAAGAGCAACATTCGT+TGG | 0.592495 | 5.1:+76033151 | MS.gene63904:CDS |
| TTTGGTGCAAAAGATGCTCA+GGG | 0.602366 | 5.1:+76033035 | MS.gene63904:CDS |
| CAAAAGAAGTCAAGATGCTG+TGG | 0.604246 | 5.1:+76033352 | MS.gene63904:CDS |
| ATTTGTCTTTGTCGGCAAAG+AGG | 0.614244 | 5.1:-76032643 | None:intergenic |
| CCGTCATAATCAAATATGGT+CGG | 0.619416 | 5.1:-76032029 | None:intergenic |
| CGAACTTCAAGAGGAAAGAG+AGG | 0.624167 | 5.1:+76032733 | MS.gene63904:CDS |
| TGCTGAACGAGAGAAACAGA+TGG | 0.626499 | 5.1:+76032694 | MS.gene63904:CDS |
| TAGAGTTCCAGAGAAACGTG+AGG | 0.630094 | 5.1:+76033085 | MS.gene63904:CDS |
| AAATCCCGATGCTTCTGCAG+AGG | 0.635355 | 5.1:+76033277 | MS.gene63904:CDS |
| GCATCAAATCAGCAGCAGGA+TGG | 0.636667 | 5.1:+76033122 | MS.gene63904:CDS |
| GTTCACCAGAAGAGTCTCCA+GGG | 0.644434 | 5.1:+76033183 | MS.gene63904:CDS |
| AGAGTTCCAGAGAAACGTGA+GGG | 0.653129 | 5.1:+76033086 | MS.gene63904:CDS |
| TTAAAGCCGAGGGCAATGGA+CGG | 0.661471 | 5.1:-76031783 | None:intergenic |
| AGCCGAAGAAGCAACCACCG+AGG | 0.687950 | 5.1:+76031760 | MS.gene63904:CDS |
| TTGGTGCAAAAGATGCTCAG+GGG | 0.730452 | 5.1:+76033036 | MS.gene63904:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATTAAACAAAATTAT+TGG | - | chr5.1:76032420-76032439 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAAAAAACCAAA+TGG | - | chr5.1:76031954-76031973 | None:intergenic | 15.0% |
| !! | ATTAAACAAAATTATTGGAA+AGG | - | chr5.1:76032415-76032434 | None:intergenic | 15.0% |
| !!! | ATTTAAAATAGTGTTTTCAT+TGG | + | chr5.1:76032339-76032358 | MS.gene63904:intron | 15.0% |
| !!! | GATTTTCATGTATTTTAAAA+TGG | + | chr5.1:76032829-76032848 | MS.gene63904:intron | 15.0% |
| !!! | GTTTTTTATTTTACTTTCTT+GGG | + | chr5.1:76032437-76032456 | MS.gene63904:intron | 15.0% |
| !!! | TGTTTTTTATTTTACTTTCT+TGG | + | chr5.1:76032436-76032455 | MS.gene63904:intron | 15.0% |
| !!! | TTGTTTTTAATTATTTGCAT+AGG | + | chr5.1:76032953-76032972 | MS.gene63904:intron | 15.0% |
| !!! | TTTTAAAATACATGAAAATC+AGG | - | chr5.1:76032829-76032848 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTTACTTTCTTG+GGG | + | chr5.1:76032438-76032457 | MS.gene63904:intron | 15.0% |
| !! | AAATTAACTGAAAAAGTTGA+GGG | - | chr5.1:76032877-76032896 | None:intergenic | 20.0% |
| !! | AATGAATTACTGAAAAAAAC+AGG | - | chr5.1:76032768-76032787 | None:intergenic | 20.0% |
| !! | ATGTCAGTAATTCAAAATAT+AGG | - | chr5.1:76032930-76032949 | None:intergenic | 20.0% |
| !! | CTCATAATTATGATGAAATT+TGG | - | chr5.1:76032216-76032235 | None:intergenic | 20.0% |
| !! | GTAATTCAAAATATAGGTAT+AGG | - | chr5.1:76032924-76032943 | None:intergenic | 20.0% |
| !!! | TTTTTATTTTACTTTCTTGG+GGG | + | chr5.1:76032439-76032458 | MS.gene63904:intron | 20.0% |
| !!! | TTTTTTCTTTCCCTTATTTA+AGG | + | chr5.1:76031971-76031990 | MS.gene63904:intron | 20.0% |
| ! | ATATTCACATACTTACATGA+TGG | + | chr5.1:76032262-76032281 | MS.gene63904:intron | 25.0% |
| ! | CAAATTAACTGAAAAAGTTG+AGG | - | chr5.1:76032878-76032897 | None:intergenic | 25.0% |
| ! | TAATTTGGTATGCTTGTTTA+TGG | + | chr5.1:76032891-76032910 | MS.gene63904:intron | 25.0% |
| ! | TGTAACATATTTGTCTTTGT+CGG | - | chr5.1:76032654-76032673 | None:intergenic | 25.0% |
| ! | TTATGATCTAACTTTCCATT+TGG | + | chr5.1:76031936-76031955 | MS.gene63904:intron | 25.0% |
| !! | CAAAAGCAACATTTTTATCA+AGG | - | chr5.1:76033019-76033038 | None:intergenic | 25.0% |
| !!! | ATCAGGTTTTGGATATATTT+TGG | - | chr5.1:76032542-76032561 | None:intergenic | 25.0% |
| !!! | CTCAACTTTTTCAGTTAATT+TGG | + | chr5.1:76032876-76032895 | MS.gene63904:intron | 25.0% |
| !!! | CTTGATAAAAATGTTGCTTT+TGG | + | chr5.1:76033017-76033036 | MS.gene63904:CDS | 25.0% |
| !!! | GTAAACCTTACATTTTAATC+TGG | + | chr5.1:76031880-76031899 | MS.gene63904:intron | 25.0% |
| !!! | TGTGTTCATTTTGGTTAATT+TGG | + | chr5.1:76032474-76032493 | MS.gene63904:intron | 25.0% |
| ATATGAGAAAAAGATTGCCA+AGG | + | chr5.1:76032601-76032620 | MS.gene63904:CDS | 30.0% | |
| TATGCACTTTCATATTGCAA+AGG | - | chr5.1:76032245-76032264 | None:intergenic | 30.0% | |
| TGAAAAAGAAATTGCTATCC+AGG | + | chr5.1:76031827-76031846 | MS.gene63904:CDS | 30.0% | |
| ! | AAGATACAGTCAATTTTCCT+AGG | - | chr5.1:76032290-76032309 | None:intergenic | 30.0% |
| ! | ATGCTGAAATGTGTTCATTT+TGG | + | chr5.1:76032465-76032484 | MS.gene63904:intron | 30.0% |
| !! | AACCTTACATTTTAATCTGG+TGG | + | chr5.1:76031883-76031902 | MS.gene63904:intron | 30.0% |
| !!! | TGTTTTCATTGGTTTAGAGA+AGG | + | chr5.1:76032350-76032369 | MS.gene63904:intron | 30.0% |
| AAAAGTTGAGGGAGAAAGAA+AGG | - | chr5.1:76032866-76032885 | None:intergenic | 35.0% | |
| AGCCACCAGATTAAAATGTA+AGG | - | chr5.1:76031888-76031907 | None:intergenic | 35.0% | |
| AGCTCAGTAGAGAATCATAA+CGG | + | chr5.1:76032180-76032199 | MS.gene63904:intron | 35.0% | |
| ATCATCTTCATTAAAGCCGA+GGG | - | chr5.1:76031796-76031815 | None:intergenic | 35.0% | |
| CCGACCATATTTGATTATGA+CGG | + | chr5.1:76032029-76032048 | MS.gene63904:CDS | 35.0% | |
| CCGTCATAATCAAATATGGT+CGG | - | chr5.1:76032032-76032051 | None:intergenic | 35.0% | |
| GACTCCGTCATAATCAAATA+TGG | - | chr5.1:76032036-76032055 | None:intergenic | 35.0% | |
| TAGCAAGAGTAAAAGTCTCA+AGG | + | chr5.1:76031851-76031870 | MS.gene63904:CDS | 35.0% | |
| TGCTCCTCAACCTTAAATAA+GGG | - | chr5.1:76031984-76032003 | None:intergenic | 35.0% | |
| ! | CTTTCCCTTATTTAAGGTTG+AGG | + | chr5.1:76031977-76031996 | MS.gene63904:intron | 35.0% |
| ! | TTGCTTTCTGAATCAGGTTT+TGG | - | chr5.1:76032553-76032572 | None:intergenic | 35.0% |
| !! | ATACTTACATGATGGATCCT+AGG | + | chr5.1:76032270-76032289 | MS.gene63904:intron | 35.0% |
| !! | TTTCTCTGGAACTCTATTCT+CGG | - | chr5.1:76033081-76033100 | None:intergenic | 35.0% |
| ACAAGTATGGCTTGAACCTT+AGG | + | chr5.1:76031730-76031749 | MS.gene63904:CDS | 40.0% | |
| AGATGAAGAGCAACATTCGT+TGG | + | chr5.1:76033151-76033170 | MS.gene63904:CDS | 40.0% | |
| ATCATCTTTGCTTCTCTCCT+TGG | - | chr5.1:76032621-76032640 | None:intergenic | 40.0% | |
| ATTTGTCTTTGTCGGCAAAG+AGG | - | chr5.1:76032646-76032665 | None:intergenic | 40.0% | |
| CAAAAGAAGTCAAGATGCTG+TGG | + | chr5.1:76033352-76033371 | MS.gene63904:CDS | 40.0% | |
| CATCATCTTCATTAAAGCCG+AGG | - | chr5.1:76031797-76031816 | None:intergenic | 40.0% | |
| CTGCTCCTCAACCTTAAATA+AGG | - | chr5.1:76031985-76032004 | None:intergenic | 40.0% | |
| TCTTCGCGATCTTGTATCAA+TGG | - | chr5.1:76032089-76032108 | None:intergenic | 40.0% | |
| TGCATAGGTTACGAAGAAGA+AGG | + | chr5.1:76032968-76032987 | MS.gene63904:intron | 40.0% | |
| ! | AGGGAAAAAGATTGGTGATC+AGG | + | chr5.1:76033202-76033221 | MS.gene63904:CDS | 40.0% |
| ! | CTTTTGTGATGCTCAGGATT+TGG | - | chr5.1:76033338-76033357 | None:intergenic | 40.0% |
| ! | GCTCTTTTGCTTTCTGAATC+AGG | - | chr5.1:76032559-76032578 | None:intergenic | 40.0% |
| ! | GGGAAAAAGATTGGTGATCA+GGG | + | chr5.1:76033203-76033222 | MS.gene63904:CDS | 40.0% |
| ! | TGACTTCTTTTGTGATGCTC+AGG | - | chr5.1:76033344-76033363 | None:intergenic | 40.0% |
| ! | TGATCACCAATCTTTTTCCC+TGG | - | chr5.1:76033203-76033222 | None:intergenic | 40.0% |
| ! | TGCAGCAAAAGAACGTTTTC+TGG | + | chr5.1:76033376-76033395 | MS.gene63904:CDS | 40.0% |
| ! | TTTGGTGCAAAAGATGCTCA+GGG | + | chr5.1:76033035-76033054 | MS.gene63904:CDS | 40.0% |
| !! | TTTTGGTGCAAAAGATGCTC+AGG | + | chr5.1:76033034-76033053 | MS.gene63904:CDS | 40.0% |
| ACAAGATCGCGAAGAGAGAA+AGG | + | chr5.1:76032094-76032113 | MS.gene63904:CDS | 45.0% | |
| ACGTATACGCGAACTTCAAG+AGG | + | chr5.1:76032724-76032743 | MS.gene63904:CDS | 45.0% | |
| AGAGTTCCAGAGAAACGTGA+GGG | + | chr5.1:76033086-76033105 | MS.gene63904:CDS | 45.0% | |
| AGGGGAGAAAACGTGACAAT+CGG | + | chr5.1:76033054-76033073 | MS.gene63904:CDS | 45.0% | |
| ATCGCGAAGAGAGAAAGGTA+TGG | + | chr5.1:76032099-76032118 | MS.gene63904:intron | 45.0% | |
| CGAACTTCAAGAGGAAAGAG+AGG | + | chr5.1:76032733-76032752 | MS.gene63904:CDS | 45.0% | |
| GAGTCTCCAGGGAAAAAGAT+TGG | + | chr5.1:76033194-76033213 | MS.gene63904:CDS | 45.0% | |
| TAGAGTTCCAGAGAAACGTG+AGG | + | chr5.1:76033085-76033104 | MS.gene63904:CDS | 45.0% | |
| TATGGTCGGATCTTCTTCCA+AGG | - | chr5.1:76032018-76032037 | None:intergenic | 45.0% | |
| TGATGCATCAAATCAGCAGC+AGG | + | chr5.1:76033118-76033137 | MS.gene63904:CDS | 45.0% | |
| TGCTGAACGAGAGAAACAGA+TGG | + | chr5.1:76032694-76032713 | MS.gene63904:CDS | 45.0% | |
| TTCATTAAAGCCGAGGGCAA+TGG | - | chr5.1:76031790-76031809 | None:intergenic | 45.0% | |
| TTGGTGCAAAAGATGCTCAG+GGG | + | chr5.1:76033036-76033055 | MS.gene63904:CDS | 45.0% | |
| ! | GACTTTTACTCTTGCTAGCC+TGG | - | chr5.1:76031848-76031867 | None:intergenic | 45.0% |
| ! | GGATTTGGCTTCATAGCCAA+GGG | - | chr5.1:76033263-76033282 | None:intergenic | 45.0% |
| ! | TCAGGATTTGGTTGTGAAGC+TGG | - | chr5.1:76033326-76033345 | None:intergenic | 45.0% |
| ! | TTTTTCCCTGGAGACTCTTC+TGG | - | chr5.1:76033191-76033210 | None:intergenic | 45.0% |
| !! | CTTTTCCTCTGCAGAAGCAT+CGG | - | chr5.1:76033285-76033304 | None:intergenic | 45.0% |
| !! | GCTGCTGATTTGATGCATCA+GGG | - | chr5.1:76033118-76033137 | None:intergenic | 45.0% |
| !! | TAATAGAAGTGCCAGTCCCT+TGG | + | chr5.1:76033244-76033263 | MS.gene63904:CDS | 45.0% |
| !! | TGCTGCTGATTTGATGCATC+AGG | - | chr5.1:76033119-76033138 | None:intergenic | 45.0% |
| !!! | TTTTCCTCTGCAGAAGCATC+GGG | - | chr5.1:76033284-76033303 | None:intergenic | 45.0% |
| AAATCCCGATGCTTCTGCAG+AGG | + | chr5.1:76033277-76033296 | MS.gene63904:CDS | 50.0% | |
| AGTTCACCAGAAGAGTCTCC+AGG | + | chr5.1:76033182-76033201 | MS.gene63904:CDS | 50.0% | |
| CTCATTCCCTCACGTTTCTC+TGG | - | chr5.1:76033095-76033114 | None:intergenic | 50.0% | |
| GCATCAAATCAGCAGCAGGA+TGG | + | chr5.1:76033122-76033141 | MS.gene63904:CDS | 50.0% | |
| GGAGCAGCAAAGAAAAGCCT+TGG | + | chr5.1:76031998-76032017 | MS.gene63904:CDS | 50.0% | |
| GGGGAGAAAACGTGACAATC+GGG | + | chr5.1:76033055-76033074 | MS.gene63904:CDS | 50.0% | |
| GTTCACCAGAAGAGTCTCCA+GGG | + | chr5.1:76033183-76033202 | MS.gene63904:CDS | 50.0% | |
| TTAAAGCCGAGGGCAATGGA+CGG | - | chr5.1:76031786-76031805 | None:intergenic | 50.0% | |
| ! | GGATTTGGTTGTGAAGCTGG+TGG | - | chr5.1:76033323-76033342 | None:intergenic | 50.0% |
| ! | GGGATTTGGCTTCATAGCCA+AGG | - | chr5.1:76033264-76033283 | None:intergenic | 50.0% |
| !! | TCTGCAGAAGCATCGGGATT+TGG | - | chr5.1:76033278-76033297 | None:intergenic | 50.0% |
| GAAGCTGGTGGCTTCTCAAC+TGG | - | chr5.1:76033311-76033330 | None:intergenic | 55.0% | |
| TGGCTTCATAGCCAAGGGAC+TGG | - | chr5.1:76033258-76033277 | None:intergenic | 55.0% | |
| AGCCGAAGAAGCAACCACCG+AGG | + | chr5.1:76031760-76031779 | MS.gene63904:CDS | 60.0% | |
| GGCCTCGGTGGTTGCTTCTT+CGG | - | chr5.1:76031765-76031784 | None:intergenic | 60.0% | |
| GGTTGCTTCTTCGGCTTCGC+AGG | - | chr5.1:76031756-76031775 | None:intergenic | 60.0% | |
| TCTTCGGCTTCGCAGGCCTA+AGG | - | chr5.1:76031749-76031768 | None:intergenic | 60.0% | |
| AGGGCAATGGACGGCCTCGG+TGG | - | chr5.1:76031777-76031796 | None:intergenic | 70.0% | |
| CCGAGGCCGTCCATTGCCCT+CGG | + | chr5.1:76031777-76031796 | MS.gene63904:CDS | 70.0% | |
| CCGAGGGCAATGGACGGCCT+CGG | - | chr5.1:76031780-76031799 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 76031726 | 76033424 | 76031726 | ID=MS.gene63904 |
| chr5.1 | mRNA | 76031726 | 76033424 | 76031726 | ID=MS.gene63904.t1;Parent=MS.gene63904 |
| chr5.1 | exon | 76031726 | 76031875 | 76031726 | ID=MS.gene63904.t1.exon1;Parent=MS.gene63904.t1 |
| chr5.1 | CDS | 76031726 | 76031875 | 76031726 | ID=cds.MS.gene63904.t1;Parent=MS.gene63904.t1 |
| chr5.1 | exon | 76031993 | 76032115 | 76031993 | ID=MS.gene63904.t1.exon2;Parent=MS.gene63904.t1 |
| chr5.1 | CDS | 76031993 | 76032115 | 76031993 | ID=cds.MS.gene63904.t1;Parent=MS.gene63904.t1 |
| chr5.1 | exon | 76032539 | 76032757 | 76032539 | ID=MS.gene63904.t1.exon3;Parent=MS.gene63904.t1 |
| chr5.1 | CDS | 76032539 | 76032757 | 76032539 | ID=cds.MS.gene63904.t1;Parent=MS.gene63904.t1 |
| chr5.1 | exon | 76032975 | 76033424 | 76032975 | ID=MS.gene63904.t1.exon4;Parent=MS.gene63904.t1 |
| chr5.1 | CDS | 76032975 | 76033424 | 76032975 | ID=cds.MS.gene63904.t1;Parent=MS.gene63904.t1 |
| Gene Sequence |
| Protein sequence |
