Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64175.t1 | XP_003612880.1 | 98.9 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 1.30E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64175.t1 | Q9FIQ5 | 66.5 | 269 | 90 | 0 | 1 | 269 | 1 | 269 | 1.7e-95 | 350.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64175.t1 | G7KDS1 | 98.9 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 9.5e-137 | 495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene64175 | 0.83571 | 1.43E-56 | -1.69E-46 |
| MS.gene058197 | MS.gene64175 | 0.814073 | 1.86E-51 | -1.69E-46 |
| MS.gene058198 | MS.gene64175 | 0.816177 | 6.32E-52 | -1.69E-46 |
| MS.gene06057 | MS.gene64175 | 0.80773 | 4.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64175.t1 | MTR_5g030070 | 98.885 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 0.0 | 546 |
| MS.gene64175.t1 | MTR_8g066790 | 75.093 | 269 | 67 | 0 | 1 | 269 | 1 | 269 | 2.78e-151 | 423 |
| MS.gene64175.t1 | MTR_8g101600 | 50.373 | 268 | 133 | 0 | 1 | 268 | 1 | 268 | 8.19e-100 | 293 |
| MS.gene64175.t1 | MTR_4g061010 | 45.956 | 272 | 141 | 3 | 1 | 266 | 1 | 272 | 2.12e-78 | 239 |
| MS.gene64175.t1 | MTR_4g129670 | 45.318 | 267 | 142 | 3 | 1 | 264 | 1 | 266 | 3.84e-76 | 232 |
| MS.gene64175.t1 | MTR_1g095530 | 41.445 | 263 | 144 | 3 | 4 | 266 | 5 | 257 | 2.09e-66 | 208 |
| MS.gene64175.t1 | MTR_6g033335 | 41.016 | 256 | 141 | 3 | 4 | 259 | 5 | 250 | 2.27e-66 | 208 |
| MS.gene64175.t1 | MTR_4g112570 | 34.231 | 260 | 168 | 2 | 3 | 259 | 6 | 265 | 6.97e-54 | 176 |
| MS.gene64175.t1 | MTR_8g097280 | 31.984 | 247 | 159 | 4 | 1 | 244 | 3 | 243 | 7.28e-49 | 163 |
| MS.gene64175.t1 | MTR_2g056130 | 31.250 | 256 | 159 | 3 | 3 | 256 | 4 | 244 | 5.01e-44 | 150 |
| MS.gene64175.t1 | MTR_5g097460 | 28.458 | 253 | 155 | 6 | 5 | 252 | 50 | 281 | 1.38e-29 | 114 |
| MS.gene64175.t1 | MTR_8g097250 | 28.866 | 97 | 64 | 2 | 119 | 212 | 28 | 122 | 7.32e-12 | 61.6 |
| MS.gene64175.t1 | MTR_5g097450 | 30.233 | 129 | 66 | 4 | 118 | 241 | 84 | 193 | 1.23e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64175.t1 | AT5G46700 | 67.286 | 269 | 88 | 0 | 1 | 269 | 1 | 269 | 2.13e-128 | 365 |
| MS.gene64175.t1 | AT2G19580 | 57.249 | 269 | 114 | 1 | 1 | 268 | 1 | 269 | 1.65e-100 | 295 |
| MS.gene64175.t1 | AT3G45600 | 44.528 | 265 | 141 | 3 | 1 | 259 | 1 | 265 | 1.75e-81 | 247 |
| MS.gene64175.t1 | AT4G28050 | 42.636 | 258 | 146 | 1 | 4 | 259 | 5 | 262 | 4.27e-78 | 237 |
| MS.gene64175.t1 | AT4G30430 | 41.603 | 262 | 151 | 1 | 3 | 262 | 4 | 265 | 2.35e-76 | 233 |
| MS.gene64175.t1 | AT2G23810 | 42.966 | 263 | 147 | 2 | 4 | 263 | 5 | 267 | 3.11e-76 | 233 |
| MS.gene64175.t1 | AT5G60220 | 43.893 | 262 | 141 | 3 | 1 | 256 | 1 | 262 | 2.04e-63 | 202 |
| MS.gene64175.t1 | AT1G18520 | 38.550 | 262 | 153 | 4 | 3 | 257 | 4 | 264 | 5.14e-61 | 194 |
| MS.gene64175.t1 | AT3G12090 | 40.316 | 253 | 139 | 4 | 4 | 256 | 5 | 245 | 1.29e-58 | 188 |
| MS.gene64175.t1 | AT4G23410 | 37.066 | 259 | 152 | 3 | 3 | 261 | 4 | 251 | 3.13e-55 | 179 |
| MS.gene64175.t1 | AT1G63260 | 32.171 | 258 | 167 | 3 | 1 | 257 | 3 | 253 | 2.74e-54 | 176 |
| MS.gene64175.t1 | AT1G63260 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 3.36e-51 | 169 |
| MS.gene64175.t1 | AT1G63260 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 3.36e-51 | 169 |
| MS.gene64175.t1 | AT1G63260 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 4.40e-51 | 169 |
| MS.gene64175.t1 | AT1G63260 | 32.719 | 217 | 144 | 2 | 1 | 216 | 3 | 218 | 3.48e-46 | 154 |
| MS.gene64175.t1 | AT3G45600 | 43.275 | 171 | 92 | 2 | 1 | 166 | 1 | 171 | 2.99e-43 | 146 |
| MS.gene64175.t1 | AT2G03840 | 29.707 | 239 | 160 | 4 | 19 | 251 | 32 | 268 | 1.40e-37 | 134 |
| MS.gene64175.t1 | AT1G63260 | 30.337 | 178 | 123 | 1 | 1 | 178 | 3 | 179 | 2.22e-33 | 121 |
| MS.gene64175.t1 | AT5G23030 | 27.132 | 258 | 183 | 2 | 1 | 256 | 2 | 256 | 2.92e-31 | 117 |
| MS.gene64175.t1 | AT5G57810 | 26.316 | 133 | 82 | 1 | 131 | 247 | 173 | 305 | 4.43e-16 | 77.0 |
Find 47 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACCTAATAGGGCTTATT+TGG | 0.104253 | 5.2:+18864472 | MS.gene64175:CDS |
| CTGGTCTCATTGGTTCCTTT+TGG | 0.214283 | 5.2:+18864336 | MS.gene64175:CDS |
| CTCTTAGTTGTGTCTCTTGC+TGG | 0.223492 | 5.2:+18864317 | MS.gene64175:CDS |
| ATGTCTGCTGCATTGTTTAT+TGG | 0.243435 | 5.2:-18865066 | None:intergenic |
| TATTATCTTGCTAGTTTGTT+TGG | 0.252856 | 5.2:+18864406 | MS.gene64175:CDS |
| TATTCCAAATAAGCCCTATT+AGG | 0.318593 | 5.2:-18864476 | None:intergenic |
| TTAATTGTGGTTTATTTGAT+TGG | 0.318944 | 5.2:+18865222 | MS.gene64175:CDS |
| CAATCATTGGTGCTGGAATC+TGG | 0.324358 | 5.2:+18864225 | MS.gene64175:CDS |
| ATGGTATGATTGAACCTAAT+AGG | 0.329364 | 5.2:+18864462 | MS.gene64175:CDS |
| TTGCAACAAGGTAGAATATA+AGG | 0.332287 | 5.2:-18864373 | None:intergenic |
| GCGAAAGAGATCCTCAGTTT+TGG | 0.353207 | 5.2:-18865265 | None:intergenic |
| GTGTCTCTTGCTGGTCTCAT+TGG | 0.354014 | 5.2:+18864326 | MS.gene64175:CDS |
| GGCTTATTTGGAATACCGTT+TGG | 0.361064 | 5.2:+18864484 | MS.gene64175:CDS |
| CATTTGTGAACCCAACATAC+TGG | 0.397625 | 5.2:+18865037 | MS.gene64175:CDS |
| CTCATGCAAGGCTGGTTTGT+TGG | 0.405503 | 5.2:+18865140 | MS.gene64175:CDS |
| TTGGACTAATCCAGTATGTT+GGG | 0.406980 | 5.2:-18865047 | None:intergenic |
| CAGATTCCAGCACCAATGAT+TGG | 0.408669 | 5.2:-18864224 | None:intergenic |
| ATCCTTTCAATCCCAATCAT+TGG | 0.408710 | 5.2:+18864212 | MS.gene64175:CDS |
| TGCATTATTTATACCTGCAT+TGG | 0.409082 | 5.2:-18864653 | None:intergenic |
| AGTTGTAACAAAGTTGTGTT+TGG | 0.435133 | 5.2:-18865113 | None:intergenic |
| AGATTCCAGCACCAATGATT+GGG | 0.447069 | 5.2:-18864223 | None:intergenic |
| TGGTATGATTGAACCTAATA+GGG | 0.447157 | 5.2:+18864463 | MS.gene64175:CDS |
| TTTGTTGGCAAATCTTAGAA+AGG | 0.458886 | 5.2:+18865155 | MS.gene64175:CDS |
| GCAATGAGCAACAACATCAT+AGG | 0.463723 | 5.2:+18864167 | MS.gene64175:CDS |
| ATTGGACTAATCCAGTATGT+TGG | 0.468680 | 5.2:-18865048 | None:intergenic |
| GTGTACATGGTTACTCTTCG+TGG | 0.469403 | 5.2:+18864437 | MS.gene64175:CDS |
| CATGTGTCAAGTTTCTTCAA+TGG | 0.476338 | 5.2:+18864270 | MS.gene64175:CDS |
| CACCAATGATTGGGATTGAA+AGG | 0.479147 | 5.2:-18864214 | None:intergenic |
| TCAATCCCAATCATTGGTGC+TGG | 0.486549 | 5.2:+18864218 | MS.gene64175:CDS |
| AACTGCGACTCATGCAAGGC+TGG | 0.493492 | 5.2:+18865132 | MS.gene64175:CDS |
| CAGACATGGATTGTCTTCAA+TGG | 0.495893 | 5.2:+18865082 | MS.gene64175:CDS |
| CAATGGCCAGTCATAATCCT+AGG | 0.501117 | 5.2:+18864287 | MS.gene64175:CDS |
| TTGAAAGGATTACAGCTACT+AGG | 0.501297 | 5.2:-18864199 | None:intergenic |
| ATGGTTACTCTTCGTGGTCA+TGG | 0.501755 | 5.2:+18864443 | MS.gene64175:CDS |
| GAGACATGAGATTCTCCAAA+AGG | 0.516594 | 5.2:-18864351 | None:intergenic |
| TGGCAAATCTTAGAAAGGAA+TGG | 0.530252 | 5.2:+18865160 | MS.gene64175:CDS |
| GTGTATGCACATTGTGTTGG+TGG | 0.546354 | 5.2:-18865015 | None:intergenic |
| TGCACGTCTTACACCAATGC+AGG | 0.553446 | 5.2:+18864640 | MS.gene64175:CDS |
| AATAAACAATGCAGCAGACA+TGG | 0.558636 | 5.2:+18865068 | MS.gene64175:CDS |
| CTCTTTCGCAAGTACAAACA+AGG | 0.567497 | 5.2:+18865279 | MS.gene64175:CDS |
| AACTTGACACATGTGTCTGC+TGG | 0.569579 | 5.2:-18864260 | None:intergenic |
| TTACAACTGCGACTCATGCA+AGG | 0.584340 | 5.2:+18865128 | MS.gene64175:CDS |
| AGAACACCTAGGATTATGAC+TGG | 0.617019 | 5.2:-18864293 | None:intergenic |
| AATGTGTATGCACATTGTGT+TGG | 0.656084 | 5.2:-18865018 | None:intergenic |
| TAAGCACAAGCATTGCAACA+AGG | 0.674562 | 5.2:-18864385 | None:intergenic |
| CAACTAAGAGAAGAACACCT+AGG | 0.686330 | 5.2:-18864304 | None:intergenic |
| CTTAGTGAAACAAATATGTG+TGG | 0.704201 | 5.2:+18864575 | MS.gene64175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGACTGAAAAATAATTAAAG+GGG | - | chr5.2:18864983-18865002 | None:intergenic | 20.0% |
| !! | CAGACTGAAAAATAATTAAA+GGG | - | chr5.2:18864984-18865003 | None:intergenic | 20.0% |
| !! | TTAAAGGGGAAAAAAATTAT+TGG | - | chr5.2:18864969-18864988 | None:intergenic | 20.0% |
| !! | TTAATTGTGGTTTATTTGAT+TGG | + | chr5.2:18865222-18865241 | MS.gene64175:CDS | 20.0% |
| !!! | CTTTAATTATTTTTCAGTCT+GGG | + | chr5.2:18864983-18865002 | MS.gene64175:intron | 20.0% |
| ! | CCAGACTGAAAAATAATTAA+AGG | - | chr5.2:18864985-18865004 | None:intergenic | 25.0% |
| !!! | AGTTAGAAGTTCTTTTAAGT+GGG | + | chr5.2:18864535-18864554 | MS.gene64175:CDS | 25.0% |
| !!! | CCTTTAATTATTTTTCAGTC+TGG | + | chr5.2:18864982-18865001 | MS.gene64175:intron | 25.0% |
| !!! | TATTATCTTGCTAGTTTGTT+TGG | + | chr5.2:18864406-18864425 | MS.gene64175:CDS | 25.0% |
| !!! | TTTGGTTATTTTTGTGTACA+TGG | + | chr5.2:18864424-18864443 | MS.gene64175:CDS | 25.0% |
| AGTTGTAACAAAGTTGTGTT+TGG | - | chr5.2:18865116-18865135 | None:intergenic | 30.0% | |
| ATCTCAAGATAAACCCATTT+CGG | + | chr5.2:18864762-18864781 | MS.gene64175:intron | 30.0% | |
| ATGGTATGATTGAACCTAAT+AGG | + | chr5.2:18864462-18864481 | MS.gene64175:CDS | 30.0% | |
| CTTAGTGAAACAAATATGTG+TGG | + | chr5.2:18864575-18864594 | MS.gene64175:CDS | 30.0% | |
| TATTCCAAATAAGCCCTATT+AGG | - | chr5.2:18864479-18864498 | None:intergenic | 30.0% | |
| TGCATTATTTATACCTGCAT+TGG | - | chr5.2:18864656-18864675 | None:intergenic | 30.0% | |
| TGGTATGATTGAACCTAATA+GGG | + | chr5.2:18864463-18864482 | MS.gene64175:CDS | 30.0% | |
| TTGCAACAAGGTAGAATATA+AGG | - | chr5.2:18864376-18864395 | None:intergenic | 30.0% | |
| TTTGTTGGCAAATCTTAGAA+AGG | + | chr5.2:18865155-18865174 | MS.gene64175:CDS | 30.0% | |
| ! | GAGTTAGAAGTTCTTTTAAG+TGG | + | chr5.2:18864534-18864553 | MS.gene64175:CDS | 30.0% |
| ! | GTTGAATCAAAGTTTTCGTA+TGG | + | chr5.2:18864601-18864620 | MS.gene64175:CDS | 30.0% |
| !!! | CAGTGTTGTTGTTTTAATTG+TGG | + | chr5.2:18865209-18865228 | MS.gene64175:CDS | 30.0% |
| AATAAACAATGCAGCAGACA+TGG | + | chr5.2:18865068-18865087 | MS.gene64175:CDS | 35.0% | |
| AATGTGTATGCACATTGTGT+TGG | - | chr5.2:18865021-18865040 | None:intergenic | 35.0% | |
| ACCCAGAAAAATCATCCAAA+CGG | - | chr5.2:18864502-18864521 | None:intergenic | 35.0% | |
| ATCCTTTCAATCCCAATCAT+TGG | + | chr5.2:18864212-18864231 | MS.gene64175:CDS | 35.0% | |
| ATGTCTGCTGCATTGTTTAT+TGG | - | chr5.2:18865069-18865088 | None:intergenic | 35.0% | |
| ATTGGACTAATCCAGTATGT+TGG | - | chr5.2:18865051-18865070 | None:intergenic | 35.0% | |
| CATGTGTCAAGTTTCTTCAA+TGG | + | chr5.2:18864270-18864289 | MS.gene64175:CDS | 35.0% | |
| TGAACCTAATAGGGCTTATT+TGG | + | chr5.2:18864472-18864491 | MS.gene64175:CDS | 35.0% | |
| TGGCAAATCTTAGAAAGGAA+TGG | + | chr5.2:18865160-18865179 | MS.gene64175:CDS | 35.0% | |
| TTGAAAGGATTACAGCTACT+AGG | - | chr5.2:18864202-18864221 | None:intergenic | 35.0% | |
| TTGGACTAATCCAGTATGTT+GGG | - | chr5.2:18865050-18865069 | None:intergenic | 35.0% | |
| ! | ACCGTTTGGATGATTTTTCT+GGG | + | chr5.2:18864498-18864517 | MS.gene64175:CDS | 35.0% |
| ! | GATCTGTATCTAGTTTCACT+AGG | - | chr5.2:18864724-18864743 | None:intergenic | 35.0% |
| ! | TACCGTTTGGATGATTTTTC+TGG | + | chr5.2:18864497-18864516 | MS.gene64175:CDS | 35.0% |
| !! | GTGACATTGACTTGAAATCT+GGG | + | chr5.2:18864793-18864812 | MS.gene64175:intron | 35.0% |
| !! | TGATTGGTTGCTTTGCTTTT+AGG | + | chr5.2:18865238-18865257 | MS.gene64175:CDS | 35.0% |
| !! | TTTTAGGAATGCCAAAACTG+AGG | + | chr5.2:18865254-18865273 | MS.gene64175:CDS | 35.0% |
| AGAACACCTAGGATTATGAC+TGG | - | chr5.2:18864296-18864315 | None:intergenic | 40.0% | |
| AGATTCCAGCACCAATGATT+GGG | - | chr5.2:18864226-18864245 | None:intergenic | 40.0% | |
| CAACTAAGAGAAGAACACCT+AGG | - | chr5.2:18864307-18864326 | None:intergenic | 40.0% | |
| CAAGATAAACCCATTTCGGT+TGG | + | chr5.2:18864766-18864785 | MS.gene64175:intron | 40.0% | |
| CACCAATGATTGGGATTGAA+AGG | - | chr5.2:18864217-18864236 | None:intergenic | 40.0% | |
| CATTTGTGAACCCAACATAC+TGG | + | chr5.2:18865037-18865056 | MS.gene64175:CDS | 40.0% | |
| CTCTTTCGCAAGTACAAACA+AGG | + | chr5.2:18865279-18865298 | MS.gene64175:CDS | 40.0% | |
| GAGACATGAGATTCTCCAAA+AGG | - | chr5.2:18864354-18864373 | None:intergenic | 40.0% | |
| GCAATGAGCAACAACATCAT+AGG | + | chr5.2:18864167-18864186 | MS.gene64175:CDS | 40.0% | |
| ! | CAGACATGGATTGTCTTCAA+TGG | + | chr5.2:18865082-18865101 | MS.gene64175:CDS | 40.0% |
| ! | GGCTTATTTGGAATACCGTT+TGG | + | chr5.2:18864484-18864503 | MS.gene64175:CDS | 40.0% |
| ! | TAAGCACAAGCATTGCAACA+AGG | - | chr5.2:18864388-18864407 | None:intergenic | 40.0% |
| ! | TCAAAGTTTTCGTATGGCTC+AGG | + | chr5.2:18864607-18864626 | MS.gene64175:CDS | 40.0% |
| !! | GGTGACATTGACTTGAAATC+TGG | + | chr5.2:18864792-18864811 | MS.gene64175:intron | 40.0% |
| AACTTGACACATGTGTCTGC+TGG | - | chr5.2:18864263-18864282 | None:intergenic | 45.0% | |
| ATGGTTACTCTTCGTGGTCA+TGG | + | chr5.2:18864443-18864462 | MS.gene64175:CDS | 45.0% | |
| CAATGGCCAGTCATAATCCT+AGG | + | chr5.2:18864287-18864306 | MS.gene64175:CDS | 45.0% | |
| CAGATTCCAGCACCAATGAT+TGG | - | chr5.2:18864227-18864246 | None:intergenic | 45.0% | |
| CTCTTAGTTGTGTCTCTTGC+TGG | + | chr5.2:18864317-18864336 | MS.gene64175:CDS | 45.0% | |
| GTGTACATGGTTACTCTTCG+TGG | + | chr5.2:18864437-18864456 | MS.gene64175:CDS | 45.0% | |
| GTGTATGCACATTGTGTTGG+TGG | - | chr5.2:18865018-18865037 | None:intergenic | 45.0% | |
| TCAATCCCAATCATTGGTGC+TGG | + | chr5.2:18864218-18864237 | MS.gene64175:CDS | 45.0% | |
| TTACAACTGCGACTCATGCA+AGG | + | chr5.2:18865128-18865147 | MS.gene64175:CDS | 45.0% | |
| ! | GCGAAAGAGATCCTCAGTTT+TGG | - | chr5.2:18865268-18865287 | None:intergenic | 45.0% |
| ! | TAAACCCATTTCGGTTGGTC+TGG | + | chr5.2:18864771-18864790 | MS.gene64175:intron | 45.0% |
| !! | CAATCATTGGTGCTGGAATC+TGG | + | chr5.2:18864225-18864244 | MS.gene64175:CDS | 45.0% |
| !!! | CTGGTCTCATTGGTTCCTTT+TGG | + | chr5.2:18864336-18864355 | MS.gene64175:CDS | 45.0% |
| GTCACCAGACCAACCGAAAT+GGG | - | chr5.2:18864778-18864797 | None:intergenic | 50.0% | |
| GTGTGTTTCTCGTCTCAGGT+TGG | + | chr5.2:18864817-18864836 | MS.gene64175:intron | 50.0% | |
| TGCACGTCTTACACCAATGC+AGG | + | chr5.2:18864640-18864659 | MS.gene64175:CDS | 50.0% | |
| TGTCACCAGACCAACCGAAA+TGG | - | chr5.2:18864779-18864798 | None:intergenic | 50.0% | |
| ! | GTGTCTCTTGCTGGTCTCAT+TGG | + | chr5.2:18864326-18864345 | MS.gene64175:CDS | 50.0% |
| !! | CTCATGCAAGGCTGGTTTGT+TGG | + | chr5.2:18865140-18865159 | MS.gene64175:CDS | 50.0% |
| AACTGCGACTCATGCAAGGC+TGG | + | chr5.2:18865132-18865151 | MS.gene64175:CDS | 55.0% | |
| ! | GGGAGTGTGTTTCTCGTCTC+AGG | + | chr5.2:18864813-18864832 | MS.gene64175:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 18864164 | 18865311 | 18864164 | ID=MS.gene64175 |
| chr5.2 | mRNA | 18864164 | 18865311 | 18864164 | ID=MS.gene64175.t1;Parent=MS.gene64175 |
| chr5.2 | exon | 18864164 | 18864661 | 18864164 | ID=MS.gene64175.t1.exon1;Parent=MS.gene64175.t1 |
| chr5.2 | CDS | 18864164 | 18864661 | 18864164 | ID=cds.MS.gene64175.t1;Parent=MS.gene64175.t1 |
| chr5.2 | exon | 18865000 | 18865311 | 18865000 | ID=MS.gene64175.t1.exon2;Parent=MS.gene64175.t1 |
| chr5.2 | CDS | 18865000 | 18865311 | 18865000 | ID=cds.MS.gene64175.t1;Parent=MS.gene64175.t1 |
| Gene Sequence |
| Protein sequence |
