Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64648.t1 | XP_024638344.1 | 99.1 | 635 | 6 | 0 | 23 | 657 | 5 | 639 | 0.00E+00 | 1224.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64648.t1 | Q52JK6 | 73.5 | 589 | 142 | 9 | 78 | 657 | 1 | 584 | 4.7e-232 | 805.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64648.t1 | A0A396IB16 | 99.1 | 635 | 6 | 0 | 23 | 657 | 5 | 639 | 0.0e+00 | 1224.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007019 | MS.gene64648 | PPI |
| MS.gene034596 | MS.gene64648 | PPI |
| MS.gene64648 | MS.gene25689 | PPI |
| MS.gene23032 | MS.gene64648 | PPI |
| MS.gene64648 | MS.gene39165 | PPI |
| MS.gene64648 | MS.gene068576 | PPI |
| MS.gene46464 | MS.gene64648 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64648.t1 | MTR_4g061843 | 97.519 | 645 | 15 | 1 | 23 | 667 | 5 | 648 | 0.0 | 1262 |
| MS.gene64648.t1 | MTR_4g061843 | 97.627 | 590 | 13 | 1 | 78 | 667 | 1 | 589 | 0.0 | 1160 |
| MS.gene64648.t1 | MTR_4g061843 | 99.319 | 587 | 4 | 0 | 23 | 609 | 5 | 591 | 0.0 | 1158 |
| MS.gene64648.t1 | MTR_4g061843 | 92.403 | 645 | 15 | 1 | 23 | 667 | 5 | 615 | 0.0 | 1076 |
| MS.gene64648.t1 | MTR_2g096180 | 78.003 | 641 | 129 | 9 | 23 | 657 | 5 | 639 | 0.0 | 911 |
| MS.gene64648.t1 | MTR_2g096180 | 77.815 | 595 | 121 | 8 | 69 | 657 | 1 | 590 | 0.0 | 846 |
| MS.gene64648.t1 | MTR_2g096180 | 74.138 | 638 | 121 | 9 | 23 | 657 | 5 | 601 | 0.0 | 846 |
| MS.gene64648.t1 | MTR_2g096180 | 73.649 | 592 | 113 | 8 | 69 | 657 | 1 | 552 | 0.0 | 781 |
| MS.gene64648.t1 | MTR_4g061960 | 95.963 | 322 | 12 | 1 | 346 | 667 | 4 | 324 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64648.t1 | AT1G07705 | 64.642 | 642 | 166 | 12 | 23 | 657 | 5 | 592 | 0.0 | 735 |
| MS.gene64648.t1 | AT5G59710 | 61.492 | 657 | 196 | 17 | 20 | 669 | 1 | 607 | 0.0 | 683 |
| MS.gene64648.t1 | AT5G59710 | 61.492 | 657 | 196 | 17 | 20 | 669 | 1 | 607 | 0.0 | 683 |
| MS.gene64648.t1 | AT1G07705 | 64.646 | 594 | 151 | 11 | 23 | 609 | 5 | 546 | 0.0 | 661 |
| MS.gene64648.t1 | AT5G59710 | 62.647 | 597 | 168 | 16 | 20 | 609 | 1 | 549 | 0.0 | 613 |
Find 196 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCATGAAGTTGCTCTTTC+TGG | 0.053689 | 4.4:+43337060 | None:intergenic |
| GAGCCTGCATTTCCCAAAAT+TGG | 0.153975 | 4.4:+43339044 | None:intergenic |
| AATTCTCCAAATGCAGTTTC+TGG | 0.164141 | 4.4:-43336521 | MS.gene64648:CDS |
| ATTGGGAGTATCCCCAATTT+TGG | 0.178580 | 4.4:-43339057 | MS.gene64648:CDS |
| CTTGGTTCTCGTCTAAATTT+TGG | 0.185487 | 4.4:-43338942 | MS.gene64648:CDS |
| AGGTCTGCTGGTTTCAGCTT+GGG | 0.204633 | 4.4:-43336884 | MS.gene64648:CDS |
| TGCAGGTTCTTTACGGAATC+AGG | 0.221431 | 4.4:-43337646 | MS.gene64648:intron |
| ATATAATTGTGCTTTGTCTT+TGG | 0.234372 | 4.4:+43335913 | None:intergenic |
| CATAGTGTTCATGTTATTTA+CGG | 0.237155 | 4.4:+43337850 | None:intergenic |
| GGAGTTGGTGGTTCCATTCC+TGG | 0.249222 | 4.4:-43339119 | MS.gene64648:CDS |
| GGTCTGCTGGTTTCAGCTTG+GGG | 0.258894 | 4.4:-43336883 | MS.gene64648:CDS |
| CCTGGGTTTCCTGCATCTAT+TGG | 0.272554 | 4.4:-43339101 | MS.gene64648:CDS |
| TGTTATTTACGGCATGAATA+TGG | 0.279407 | 4.4:+43337861 | None:intergenic |
| TATAATTGTGCTTTGTCTTT+GGG | 0.286754 | 4.4:+43335914 | None:intergenic |
| GTCTGCTGGTTTCAGCTTGG+GGG | 0.290248 | 4.4:-43336882 | MS.gene64648:CDS |
| ACAAAATTGCAGGTTCTTTA+CGG | 0.293898 | 4.4:-43337653 | MS.gene64648:intron |
| GAGGTCTGCTGGTTTCAGCT+TGG | 0.308592 | 4.4:-43336885 | MS.gene64648:CDS |
| TCATCCTGATTACACTTAAC+AGG | 0.311714 | 4.4:+43336339 | None:intergenic |
| GACCTCCTGGCATTGGATTA+AGG | 0.320047 | 4.4:-43336550 | MS.gene64648:CDS |
| GGAAGTTCCCATGGGCATTC+AGG | 0.326427 | 4.4:-43339203 | MS.gene64648:CDS |
| ATGGCATTTGAAGACGAAAC+TGG | 0.341297 | 4.4:+43336444 | None:intergenic |
| GGATTGTCTGTGCCTGGTCT+TGG | 0.354395 | 4.4:-43338960 | MS.gene64648:CDS |
| TTACGGCATGAATATGGCTT+TGG | 0.363444 | 4.4:+43337867 | None:intergenic |
| AGCCTGCATTTCCCAAAATT+GGG | 0.370151 | 4.4:+43339045 | None:intergenic |
| TGCACCAGCGGCTCCATGTT+GGG | 0.371642 | 4.4:+43335483 | None:intergenic |
| TTGTTTATTGTGGAGTTTCT+TGG | 0.372346 | 4.4:+43339472 | None:intergenic |
| CCTGCTGCAGGAGCTATTCA+AGG | 0.381823 | 4.4:-43339550 | MS.gene64648:intron |
| GGTAATCGAAATGCTGTTCC+AGG | 0.381908 | 4.4:-43339080 | MS.gene64648:CDS |
| CAAGGGTTGCACAATCTTCA+TGG | 0.382999 | 4.4:-43339532 | MS.gene64648:CDS |
| TACGGCATGAATATGGCTTT+GGG | 0.390391 | 4.4:+43337868 | None:intergenic |
| ACAATAAACAATGTTCCATC+TGG | 0.391911 | 4.4:-43339460 | MS.gene64648:CDS |
| ATCAAAAGGTGAACTATCAT+TGG | 0.392653 | 4.4:+43337805 | None:intergenic |
| GACCTGGCATCCCTTGCTCT+TGG | 0.392905 | 4.4:-43336308 | MS.gene64648:CDS |
| CCAAATGCAGTTTCTGGTAT+GGG | 0.395342 | 4.4:-43336515 | MS.gene64648:CDS |
| CAGCAGATGGGGAGGTCTGC+TGG | 0.397465 | 4.4:-43336896 | MS.gene64648:CDS |
| GGGAATATTGGAAGGACTGG+TGG | 0.398160 | 4.4:-43338984 | MS.gene64648:CDS |
| ATTCCAGTGTTTCATGTTTG+AGG | 0.398380 | 4.4:-43340341 | None:intergenic |
| CGAAATGCTGTTCCAGGATT+GGG | 0.398756 | 4.4:-43339074 | MS.gene64648:CDS |
| TGAAGATTTCCCTGCATTGC+CGG | 0.415140 | 4.4:-43337571 | MS.gene64648:CDS |
| TCCAAATGCAGTTTCTGGTA+TGG | 0.418544 | 4.4:-43336516 | MS.gene64648:CDS |
| AACAGTGGATCAGGTGCTTT+AGG | 0.420328 | 4.4:-43338915 | MS.gene64648:CDS |
| GGTGGAGGATTGTCTGTGCC+TGG | 0.430489 | 4.4:-43338966 | MS.gene64648:CDS |
| TGGTAATGCAGATTATGATA+TGG | 0.432753 | 4.4:-43337090 | MS.gene64648:CDS |
| TCATGGTTCTGTTGACCAAT+GGG | 0.432961 | 4.4:+43337609 | None:intergenic |
| AGAGGAGGTACAAGCGTTGT+AGG | 0.434646 | 4.4:-43339170 | MS.gene64648:CDS |
| AGCTCTGTGGGAAACATGAT+TGG | 0.435660 | 4.4:-43339011 | MS.gene64648:CDS |
| ATGCAAATCTTCCACTAGAA+AGG | 0.436221 | 4.4:+43339413 | None:intergenic |
| GGATTTAATAGTGGCACAAA+TGG | 0.439017 | 4.4:-43339140 | MS.gene64648:CDS |
| ACATCTTTCTCTAGTCAGTC+TGG | 0.441937 | 4.4:-43339670 | MS.gene64648:CDS |
| TTTGGTGGAAACAGTGGATC+AGG | 0.442622 | 4.4:-43338924 | MS.gene64648:CDS |
| GTTGCAGACCTGTGACTGAT+AGG | 0.442745 | 4.4:+43336724 | None:intergenic |
| GGAATTGATCTTACAACCCT+TGG | 0.443577 | 4.4:-43336287 | MS.gene64648:CDS |
| CCCATACCAGAAACTGCATT+TGG | 0.445239 | 4.4:+43336515 | None:intergenic |
| AACGCTTGTACCTCCTCTAT+TGG | 0.445588 | 4.4:+43339175 | None:intergenic |
| AAGGATTGTGTTGTTGCGGT+TGG | 0.449239 | 4.4:+43336837 | None:intergenic |
| TCGAAATGCTGTTCCAGGAT+TGG | 0.450076 | 4.4:-43339075 | MS.gene64648:CDS |
| TTGCACCAGCGGCTCCATGT+TGG | 0.451365 | 4.4:+43335482 | None:intergenic |
| GAAGATTTCCCTGCATTGCC+GGG | 0.452390 | 4.4:-43337570 | MS.gene64648:CDS |
| CCAGATCCATATGGTTTGCT+TGG | 0.453436 | 4.4:-43336362 | MS.gene64648:CDS |
| CCTTTGAATCCCGGCAATGC+AGG | 0.453868 | 4.4:+43337561 | None:intergenic |
| TTGGCCTGTTAAGTGTAATC+AGG | 0.454081 | 4.4:-43336343 | MS.gene64648:CDS |
| AATGCCCATGGGAACTTCCA+TGG | 0.455333 | 4.4:+43339207 | None:intergenic |
| TCAAGTCGTCCTAGTTCTGC+TGG | 0.461619 | 4.4:-43337761 | MS.gene64648:CDS |
| TTTCTTGGTGTGAGAGTACC+AGG | 0.463364 | 4.4:+43339487 | None:intergenic |
| TCTTTACGGAATCAGGGTCT+TGG | 0.463616 | 4.4:-43337639 | MS.gene64648:CDS |
| CGGACCGTTTCAAATGAGCT+TGG | 0.469485 | 4.4:+43335420 | None:intergenic |
| TCTGCTGGTTTCAGCTTGGG+GGG | 0.472161 | 4.4:-43336881 | MS.gene64648:CDS |
| ACCACAATCGATACTCTTTG+TGG | 0.472191 | 4.4:+43335517 | None:intergenic |
| CCTGCATTGCCGGGATTCAA+AGG | 0.472759 | 4.4:-43337561 | MS.gene64648:intron |
| GGGAAGTCATTGAGATCAAA+AGG | 0.475021 | 4.4:+43337791 | None:intergenic |
| TTCCAAGAGCAAGGGATGCC+AGG | 0.475746 | 4.4:+43336306 | None:intergenic |
| ACTGCATTTGGAGAATTTGA+AGG | 0.478233 | 4.4:+43336527 | None:intergenic |
| AAATATCCGATCCATGTTGA+TGG | 0.481651 | 4.4:+43336762 | None:intergenic |
| CATGCTTTCATTCAGCAGAT+GGG | 0.482621 | 4.4:-43336908 | MS.gene64648:intron |
| GAGTTGGTGGTTCCATTCCT+GGG | 0.483905 | 4.4:-43339118 | MS.gene64648:CDS |
| TTTGAAGACGAAACTGGGAT+TGG | 0.490046 | 4.4:+43336450 | None:intergenic |
| CCAAGCAAACCATATGGATC+TGG | 0.491880 | 4.4:+43336362 | None:intergenic |
| TTTGTGCCACTATTAAATCC+AGG | 0.492921 | 4.4:+43339143 | None:intergenic |
| CATTCAGGAGTCACCAATAG+AGG | 0.496658 | 4.4:-43339188 | MS.gene64648:CDS |
| AGCACCCAACATGGAGCCGC+TGG | 0.497210 | 4.4:-43335487 | MS.gene64648:CDS |
| AGGATTGTGTTGTTGCGGTT+GGG | 0.497527 | 4.4:+43336838 | None:intergenic |
| ATGAATTCAAATTTAAGCCA+AGG | 0.497535 | 4.4:+43336270 | None:intergenic |
| GGAGGATCTCAAGGGCAGTT+GGG | 0.497679 | 4.4:-43337740 | MS.gene64648:intron |
| ACCAGCGGACCTCCTGGCAT+TGG | 0.498121 | 4.4:-43336557 | MS.gene64648:CDS |
| CTGCTGGTTTCAGCTTGGGG+GGG | 0.498683 | 4.4:-43336880 | MS.gene64648:CDS |
| TGGAGGATCTCAAGGGCAGT+TGG | 0.499780 | 4.4:-43337741 | MS.gene64648:CDS |
| TTTAATGTTCCCAACATGCC+TGG | 0.500039 | 4.4:-43339505 | MS.gene64648:CDS |
| ATTGGGGATACTCCCAATCC+TGG | 0.500077 | 4.4:+43339062 | None:intergenic |
| GTGTAGACCAGCGGACCTCC+TGG | 0.505100 | 4.4:-43336563 | MS.gene64648:intron |
| GGTCTTGGCATTAGTCCCAT+TGG | 0.506638 | 4.4:-43337624 | MS.gene64648:CDS |
| GTGAGAGTACCAGGCATGTT+GGG | 0.507189 | 4.4:+43339496 | None:intergenic |
| AGATGGAACATTGTTTATTG+TGG | 0.507252 | 4.4:+43339462 | None:intergenic |
| AACAGGCCAAGCAAACCATA+TGG | 0.507979 | 4.4:+43336356 | None:intergenic |
| TGATCCAAGCTCATTTGAAA+CGG | 0.510364 | 4.4:-43335424 | MS.gene64648:CDS |
| GGGAATTCTTATCCTAGTGC+TGG | 0.510440 | 4.4:-43337902 | MS.gene64648:CDS |
| TGAGATCCTCCAGCAGAACT+AGG | 0.510817 | 4.4:+43337752 | None:intergenic |
| TCCAATGCCAGGAGGTCCGC+TGG | 0.514108 | 4.4:+43336556 | None:intergenic |
| GAAGGCCTTAATCCAATGCC+AGG | 0.516836 | 4.4:+43336545 | None:intergenic |
| TAAATAACATGAACACTATG+AGG | 0.522146 | 4.4:-43337847 | MS.gene64648:CDS |
| CTCATGGTTCTGTTGACCAA+TGG | 0.522261 | 4.4:+43337608 | None:intergenic |
| AGTTCTGCTGGAGGATCTCA+AGG | 0.522398 | 4.4:-43337749 | MS.gene64648:CDS |
| AATATTGGAAGGACTGGTGG+AGG | 0.522752 | 4.4:-43338981 | MS.gene64648:CDS |
| CAATAAACAATGTTCCATCT+GGG | 0.525213 | 4.4:-43339459 | MS.gene64648:CDS |
| GGAAACCCTGGATTTAATAG+TGG | 0.525633 | 4.4:-43339149 | MS.gene64648:CDS |
| GAAAGTGCGCCTCCAGCACT+AGG | 0.527321 | 4.4:+43337890 | None:intergenic |
| TGAATTCAAATTTAAGCCAA+GGG | 0.528103 | 4.4:+43336271 | None:intergenic |
| AATCTCATTCATCAAAATGT+TGG | 0.528269 | 4.4:+43340294 | None:intergenic |
| TCAAATCTTCAAGATAGTGC+TGG | 0.528594 | 4.4:-43339706 | MS.gene64648:CDS |
| TCAAAACTCACGTGAAGAGC+AGG | 0.530878 | 4.4:+43336146 | None:intergenic |
| TAGGACGACTTGACAGTTGA+GGG | 0.531587 | 4.4:+43337771 | None:intergenic |
| CTTTCAGTAACAACAGAGGT+TGG | 0.532021 | 4.4:-43335545 | MS.gene64648:intron |
| CATGTTGATGGAGAAGATCC+TGG | 0.533901 | 4.4:+43336774 | None:intergenic |
| CAATCTACACCAGATCCATA+TGG | 0.534102 | 4.4:-43336371 | MS.gene64648:CDS |
| AATAGTGGCACAAATGGAGT+TGG | 0.536543 | 4.4:-43339134 | MS.gene64648:CDS |
| AGTGGCACAAATGGAGTTGG+TGG | 0.539134 | 4.4:-43339131 | MS.gene64648:CDS |
| TCTTTGCAGTCTTCTCTGAA+CGG | 0.539141 | 4.4:-43339736 | MS.gene64648:intron |
| TTTCGATTACCAATAGATGC+AGG | 0.540287 | 4.4:+43339092 | None:intergenic |
| AACAGTACACCTTTGAATCC+CGG | 0.541254 | 4.4:+43337552 | None:intergenic |
| TTGTGCCACTATTAAATCCA+GGG | 0.541845 | 4.4:+43339144 | None:intergenic |
| CTCATTTGAAACGGTCCGCA+AGG | 0.543541 | 4.4:-43335415 | MS.gene64648:intron |
| TGGCATTTGAAGACGAAACT+GGG | 0.547254 | 4.4:+43336445 | None:intergenic |
| GTTGATATTGCTGGATGAGC+GGG | 0.549237 | 4.4:+43336483 | None:intergenic |
| CCAATAGATGCAGGAAACCC+AGG | 0.550641 | 4.4:+43339101 | None:intergenic |
| TAAGATCAATTCCAAGAGCA+AGG | 0.550924 | 4.4:+43336297 | None:intergenic |
| TAATGCGACAGGGAGATTGT+TGG | 0.553815 | 4.4:+43339390 | None:intergenic |
| GTTGTTGCGGTTGGGTACGA+TGG | 0.553916 | 4.4:+43336846 | None:intergenic |
| CAAACCTGTGATAATGCGAC+AGG | 0.554019 | 4.4:+43339379 | None:intergenic |
| AAGGGTTGCACAATCTTCAT+GGG | 0.554048 | 4.4:-43339531 | MS.gene64648:CDS |
| CTGCTGCAGGAGCTATTCAA+GGG | 0.556505 | 4.4:-43339549 | MS.gene64648:intron |
| GCAGGTTCTTTACGGAATCA+GGG | 0.556594 | 4.4:-43337645 | MS.gene64648:intron |
| TCTCCCTGTCGCATTATCAC+AGG | 0.561368 | 4.4:-43339383 | MS.gene64648:intron |
| ATGCTTTCATTCAGCAGATG+GGG | 0.561934 | 4.4:-43336907 | MS.gene64648:intron |
| CTATCCCATGGAAGTTCCCA+TGG | 0.563167 | 4.4:-43339212 | MS.gene64648:CDS |
| TCATTCTGCCTATCAGTCAC+AGG | 0.566070 | 4.4:-43336732 | MS.gene64648:intron |
| TCTCGAATCACTAGCTCTGT+GGG | 0.567794 | 4.4:-43339023 | MS.gene64648:CDS |
| ATGCCCATGGGAACTTCCAT+GGG | 0.569776 | 4.4:+43339208 | None:intergenic |
| AGATGCAGGAAACCCAGGAA+TGG | 0.570194 | 4.4:+43339106 | None:intergenic |
| TCTGTGGGAAACATGATTGG+AGG | 0.570772 | 4.4:-43339008 | MS.gene64648:CDS |
| GTGGGAAACATGATTGGAGG+GGG | 0.571237 | 4.4:-43339005 | MS.gene64648:CDS |
| CTTTGAATCCCGGCAATGCA+GGG | 0.572734 | 4.4:+43337562 | None:intergenic |
| CAAGCAAGCACATACGAAAG+AGG | 0.574741 | 4.4:-43335462 | MS.gene64648:CDS |
| TGGTGACTCCTGAATGCCCA+TGG | 0.577471 | 4.4:+43339195 | None:intergenic |
| ACACTACACTTGCGCACGCA+CGG | 0.578799 | 4.4:+43334530 | None:intergenic |
| CATTGTGGCACATTAAACTC+TGG | 0.580529 | 4.4:+43336188 | None:intergenic |
| ATGGTCAGAAGAATCAGCTA+AGG | 0.580783 | 4.4:-43336216 | MS.gene64648:CDS |
| ACAAGCGTTGTAGGAAACCC+TGG | 0.586780 | 4.4:-43339161 | MS.gene64648:CDS |
| GACTGATAGGCAGAATGAGA+TGG | 0.587035 | 4.4:+43336737 | None:intergenic |
| CTAAAAGACTGATTTAGAGA+TGG | 0.587996 | 4.4:+43336425 | None:intergenic |
| ACTGAAGGATTGTGTTGTTG+CGG | 0.588540 | 4.4:+43336833 | None:intergenic |
| CAGGATCTTCTCCATCAACA+TGG | 0.588598 | 4.4:-43336773 | MS.gene64648:CDS |
| TATGTGCTTGCTTGCACCAG+CGG | 0.588647 | 4.4:+43335471 | None:intergenic |
| CAGGATGAATGATCTTGACC+TGG | 0.589311 | 4.4:-43336324 | MS.gene64648:CDS |
| CTCAGGGGATTTCAATGCAA+GGG | 0.592321 | 4.4:-43337922 | MS.gene64648:CDS |
| TGAGATTCTGGAGACTCTCA+AGG | 0.593022 | 4.4:-43340278 | MS.gene64648:intron |
| CTCTCGAATCACTAGCTCTG+TGG | 0.594709 | 4.4:-43339024 | MS.gene64648:CDS |
| GCCTGCATTTCCCAAAATTG+GGG | 0.594770 | 4.4:+43339046 | None:intergenic |
| CTTTCATTCAGCAGATGGGG+AGG | 0.594944 | 4.4:-43336904 | MS.gene64648:intron |
| CTAGGACGACTTGACAGTTG+AGG | 0.596395 | 4.4:+43337770 | None:intergenic |
| TCAGGTGCTTTAGGCATGCA+AGG | 0.597495 | 4.4:-43338906 | MS.gene64648:CDS |
| TTGTTGCGGTTGGGTACGAT+GGG | 0.601701 | 4.4:+43336847 | None:intergenic |
| TTAGCTGATTCTTCTGACCA+TGG | 0.603273 | 4.4:+43336218 | None:intergenic |
| TCTTCTCCATCAACATGGAT+CGG | 0.607862 | 4.4:-43336768 | MS.gene64648:CDS |
| TCAGTAACAACAGAGGTTGG+TGG | 0.609490 | 4.4:-43335542 | MS.gene64648:intron |
| CCTCAGGGGATTTCAATGCA+AGG | 0.610133 | 4.4:-43337923 | MS.gene64648:CDS |
| TGTGAGAGTACCAGGCATGT+TGG | 0.617966 | 4.4:+43339495 | None:intergenic |
| AATTCTTATCCTAGTGCTGG+AGG | 0.624767 | 4.4:-43337899 | MS.gene64648:CDS |
| TTTATTCAGGATCTCCTCAG+GGG | 0.627233 | 4.4:-43337937 | MS.gene64648:intron |
| GTTCTCATCTGTAAATAACC+AGG | 0.628869 | 4.4:-43336792 | MS.gene64648:CDS |
| AAGATCAATTCCAAGAGCAA+GGG | 0.631770 | 4.4:+43336298 | None:intergenic |
| CTGTGGGAAACATGATTGGA+GGG | 0.635617 | 4.4:-43339007 | MS.gene64648:CDS |
| TGTTGATATTGCTGGATGAG+CGG | 0.640291 | 4.4:+43336482 | None:intergenic |
| GTTTAAGAGAGCACCCAACA+TGG | 0.642876 | 4.4:-43335496 | MS.gene64648:CDS |
| TGGTCAGAAGAATCAGCTAA+GGG | 0.644741 | 4.4:-43336215 | MS.gene64648:CDS |
| ACACTGCCACTGCTAACTGA+AGG | 0.645195 | 4.4:+43336818 | None:intergenic |
| CAAGCAGGAAACCTTTCTAG+TGG | 0.646735 | 4.4:-43339424 | MS.gene64648:CDS |
| ACCACAAAGAGTATCGATTG+TGG | 0.647184 | 4.4:-43335518 | MS.gene64648:CDS |
| ATCTTCAAGATAGTGCTGGA+CGG | 0.648423 | 4.4:-43339702 | MS.gene64648:CDS |
| AATAAACAATGTTCCATCTG+GGG | 0.648478 | 4.4:-43339458 | MS.gene64648:CDS |
| TGTGGGAAACATGATTGGAG+GGG | 0.648654 | 4.4:-43339006 | MS.gene64648:CDS |
| TTTAGACGAGAACCAAGACC+AGG | 0.649973 | 4.4:+43338948 | None:intergenic |
| CACAATCCTTCAGTTAGCAG+TGG | 0.652655 | 4.4:-43336824 | MS.gene64648:CDS |
| TATCCCATGGAAGTTCCCAT+GGG | 0.664662 | 4.4:-43339211 | MS.gene64648:CDS |
| ATAAACAATGTTCCATCTGG+GGG | 0.673728 | 4.4:-43339457 | MS.gene64648:CDS |
| AAACTCACGTGAAGAGCAGG+TGG | 0.674123 | 4.4:+43336149 | None:intergenic |
| TCAGGAGTCACCAATAGAGG+AGG | 0.674928 | 4.4:-43339185 | MS.gene64648:CDS |
| GGTGACTCCTGAATGCCCAT+GGG | 0.676776 | 4.4:+43339196 | None:intergenic |
| ATTTCTTTCAGTAACAACAG+AGG | 0.681631 | 4.4:-43335549 | MS.gene64648:intron |
| TGGGAAACATGATTGGAGGG+GGG | 0.687457 | 4.4:-43339004 | MS.gene64648:CDS |
| ATGAGCAGTGTACTTCCACA+AGG | 0.687795 | 4.4:-43338870 | MS.gene64648:intron |
| GTTCTGCTGGAGGATCTCAA+GGG | 0.687942 | 4.4:-43337748 | MS.gene64648:CDS |
| AGTCGTCCTAGTTCTGCTGG+AGG | 0.688362 | 4.4:-43337758 | MS.gene64648:CDS |
| GGCCTTAATCCAATGCCAGG+AGG | 0.705806 | 4.4:+43336548 | None:intergenic |
| CCTTGCATTGAAATCCCCTG+AGG | 0.719940 | 4.4:+43337923 | None:intergenic |
| AAACCTGTGATAATGCGACA+GGG | 0.725967 | 4.4:+43339380 | None:intergenic |
| TGTTCAGTGAAATAACATTG+TGG | 0.728860 | 4.4:+43336173 | None:intergenic |
| AGACTGACTAGAGAAAGATG+TGG | 0.776168 | 4.4:+43339672 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTATTTTTATAGGAAA+AGG | + | chr4.4:43336177-43336196 | None:intergenic | 10.0% |
| !!! | ACTGTAAAAATTATTTTTAT+AGG | + | chr4.4:43336183-43336202 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAGTTTATACAAT+TGG | - | chr4.4:43340263-43340282 | MS.gene64648:intron | 10.0% |
| !! | AAAATTAAAACAACCAAAAA+AGG | + | chr4.4:43339011-43339030 | None:intergenic | 15.0% |
| !! | TTATATTGTATGATTATCTT+CGG | - | chr4.4:43337398-43337417 | MS.gene64648:intron | 15.0% |
| !!! | ATTTGGGATTATTAAAATTT+GGG | - | chr4.4:43339037-43339056 | MS.gene64648:CDS | 15.0% |
| !!! | ATTTTATATAGTTTTCCAAA+CGG | - | chr4.4:43339143-43339162 | MS.gene64648:CDS | 15.0% |
| !!! | TAACAATTATTTTGACTAAA+CGG | + | chr4.4:43335287-43335306 | None:intergenic | 15.0% |
| !!! | TTGTATATACATTTTAACAA+GGG | + | chr4.4:43339881-43339900 | None:intergenic | 15.0% |
| !!! | TTTGTATATACATTTTAACA+AGG | + | chr4.4:43339882-43339901 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTGGATGATTT+GGG | - | chr4.4:43339021-43339040 | MS.gene64648:CDS | 15.0% |
| !!! | TTTTTGGTTGTTTTAATTTT+TGG | - | chr4.4:43339011-43339030 | MS.gene64648:CDS | 15.0% |
| !! | AAAATAAAAATGACAGAAAG+AGG | + | chr4.4:43335577-43335596 | None:intergenic | 20.0% |
| !! | AATTGTAATAGGATAAATAG+TGG | - | chr4.4:43336373-43336392 | MS.gene64648:CDS | 20.0% |
| !! | ATTCACAATAACAAGTTAAA+AGG | + | chr4.4:43335086-43335105 | None:intergenic | 20.0% |
| !! | GCCATGTTTATAATATTAAT+AGG | - | chr4.4:43337905-43337924 | MS.gene64648:CDS | 20.0% |
| !! | GCCTATTAATATTATAAACA+TGG | + | chr4.4:43337909-43337928 | None:intergenic | 20.0% |
| !! | GTTTAGTCAAAATAATTGTT+AGG | - | chr4.4:43335286-43335305 | MS.gene64648:intron | 20.0% |
| !! | GTTTATACAATTGGTATATA+AGG | - | chr4.4:43340272-43340291 | MS.gene64648:intron | 20.0% |
| !! | TGGTTAAAAAGTTTCTTATT+TGG | - | chr4.4:43337427-43337446 | MS.gene64648:intron | 20.0% |
| !! | TTAGTAAATTATAGATTGTC+AGG | - | chr4.4:43334889-43334908 | MS.gene64648:intron | 20.0% |
| !!! | AAATGTAAACTCTTGTATTT+TGG | - | chr4.4:43339111-43339130 | MS.gene64648:CDS | 20.0% |
| !!! | AATTATTTCTAACGAAGTAA+GGG | - | chr4.4:43339287-43339306 | MS.gene64648:intron | 20.0% |
| !!! | AATTCAGATAATCAAGATTT+TGG | + | chr4.4:43339253-43339272 | None:intergenic | 20.0% |
| !!! | ATTCAGATAATCAAGATTTT+GGG | + | chr4.4:43339252-43339271 | None:intergenic | 20.0% |
| !!! | CATTGTTTTACATATTTTAC+AGG | - | chr4.4:43338842-43338861 | MS.gene64648:intron | 20.0% |
| !!! | GAAATAAATCACAATCTTTT+AGG | - | chr4.4:43339955-43339974 | MS.gene64648:intron | 20.0% |
| !!! | GATTTGGGATTATTAAAATT+TGG | - | chr4.4:43339036-43339055 | MS.gene64648:CDS | 20.0% |
| !!! | GGTTAAAAAGTTTCTTATTT+GGG | - | chr4.4:43337428-43337447 | MS.gene64648:intron | 20.0% |
| !!! | GTTGATGATAATGAAAAAAA+AGG | + | chr4.4:43334812-43334831 | None:intergenic | 20.0% |
| !!! | GTTTTAATTTTTGGATGATT+TGG | - | chr4.4:43339020-43339039 | MS.gene64648:CDS | 20.0% |
| !!! | TTTTATATAGTTTTCCAAAC+GGG | - | chr4.4:43339144-43339163 | MS.gene64648:CDS | 20.0% |
| ! | AAAAACACCTGAATCAAAAT+TGG | - | chr4.4:43339899-43339918 | MS.gene64648:intron | 25.0% |
| ! | AAGAATAGTAGAATGATCAT+GGG | - | chr4.4:43334750-43334769 | MS.gene64648:intron | 25.0% |
| ! | AATATGGTCAGAAAAATCAA+CGG | + | chr4.4:43337740-43337759 | None:intergenic | 25.0% |
| ! | AATCTAACTACTTAATTGCT+TGG | + | chr4.4:43337667-43337686 | None:intergenic | 25.0% |
| ! | AATCTCATTCATCAAAATGT+TGG | + | chr4.4:43334570-43334589 | None:intergenic | 25.0% |
| ! | AATTAAGTAGTTAGATTTGC+TGG | - | chr4.4:43337670-43337689 | MS.gene64648:intron | 25.0% |
| ! | AATTTACTAATCATGCATAG+AGG | + | chr4.4:43334879-43334898 | None:intergenic | 25.0% |
| ! | ACACTTATTCAATCTTTGTT+AGG | - | chr4.4:43336422-43336441 | MS.gene64648:CDS | 25.0% |
| ! | ATAGAGATTAGAGAATAGAA+CGG | - | chr4.4:43336461-43336480 | MS.gene64648:CDS | 25.0% |
| ! | ATATAATTGTGCTTTGTCTT+TGG | + | chr4.4:43338951-43338970 | None:intergenic | 25.0% |
| ! | ATGAATTCAAATTTAAGCCA+AGG | + | chr4.4:43338594-43338613 | None:intergenic | 25.0% |
| ! | ATTAAAGAACATCACGAATA+TGG | + | chr4.4:43339491-43339510 | None:intergenic | 25.0% |
| ! | CTCGATAAGTAGTTAATTAA+AGG | - | chr4.4:43339069-43339088 | MS.gene64648:CDS | 25.0% |
| ! | TAAATAACATGAACACTATG+AGG | - | chr4.4:43337014-43337033 | MS.gene64648:intron | 25.0% |
| ! | TATAATTGTGCTTTGTCTTT+GGG | + | chr4.4:43338950-43338969 | None:intergenic | 25.0% |
| ! | TGAATTCAAATTTAAGCCAA+GGG | + | chr4.4:43338593-43338612 | None:intergenic | 25.0% |
| ! | TGAATTCAGAAAATTCTGTT+TGG | + | chr4.4:43336765-43336784 | None:intergenic | 25.0% |
| ! | TTAAAACAACCAAAAAAGGA+AGG | + | chr4.4:43339007-43339026 | None:intergenic | 25.0% |
| !! | AACAGAATTTTCTGAATTCA+CGG | - | chr4.4:43336765-43336784 | MS.gene64648:CDS | 25.0% |
| !! | ATCTCTAAATCAGTCTTTTA+GGG | - | chr4.4:43338438-43338457 | MS.gene64648:intron | 25.0% |
| !! | CATAGTGTTCATGTTATTTA+CGG | + | chr4.4:43337014-43337033 | None:intergenic | 25.0% |
| !! | CATTTTGAATACTAAACTCA+TGG | + | chr4.4:43337272-43337291 | None:intergenic | 25.0% |
| !! | TAGGTGTTGTAAATTGTAAT+AGG | - | chr4.4:43336362-43336381 | MS.gene64648:CDS | 25.0% |
| !! | TATCATGAAACCTTTTCTTT+GGG | - | chr4.4:43338764-43338783 | MS.gene64648:intron | 25.0% |
| !! | TCAAAAGAGTTTGTGTTTTA+GGG | + | chr4.4:43336651-43336670 | None:intergenic | 25.0% |
| !! | TTAGTATCAACTTCTTTTCA+AGG | - | chr4.4:43336112-43336131 | MS.gene64648:intron | 25.0% |
| !! | TTTTCAAAACATGCAGATTA+TGG | - | chr4.4:43340010-43340029 | MS.gene64648:intron | 25.0% |
| !!! | AATTATACTATGCTACTTTG+TGG | - | chr4.4:43336889-43336908 | MS.gene64648:CDS | 25.0% |
| !!! | CAATTATTTCTAACGAAGTA+AGG | - | chr4.4:43339286-43339305 | MS.gene64648:intron | 25.0% |
| !!! | TAAACTCTTGTATTTTGGAT+TGG | - | chr4.4:43339116-43339135 | MS.gene64648:CDS | 25.0% |
| !!! | TACATCATTTTAGTTTAAGC+AGG | + | chr4.4:43338230-43338249 | None:intergenic | 25.0% |
| !!! | TCATTATCATCAACTTTTTC+TGG | - | chr4.4:43334818-43334837 | MS.gene64648:intron | 25.0% |
| !!! | TGTTTTATTGTGATTGTGAT+AGG | - | chr4.4:43336272-43336291 | MS.gene64648:CDS | 25.0% |
| !!! | TTTATGTTTTGAGTGTATAC+TGG | - | chr4.4:43334612-43334631 | MS.gene64648:intron | 25.0% |
| AAAAGGAATAAACCTAGACA+TGG | + | chr4.4:43335069-43335088 | None:intergenic | 30.0% | |
| AAACATGCAGATTATGGATT+TGG | - | chr4.4:43340016-43340035 | MS.gene64648:intron | 30.0% | |
| AAAGGAAGGATTGAAGAAAA+TGG | + | chr4.4:43338993-43339012 | None:intergenic | 30.0% | |
| AAAGGAATAAACCTAGACAT+GGG | + | chr4.4:43335068-43335087 | None:intergenic | 30.0% | |
| AACAATCGAATAATGCTAGT+TGG | + | chr4.4:43339554-43339573 | None:intergenic | 30.0% | |
| AACTAGCATTATTCGATTGT+TGG | - | chr4.4:43339553-43339572 | MS.gene64648:intron | 30.0% | |
| AATAAACAATGTTCCATCTG+GGG | - | chr4.4:43335403-43335422 | MS.gene64648:intron | 30.0% | |
| AATAGTGTTCTCCATCAATT+TGG | - | chr4.4:43339730-43339749 | MS.gene64648:CDS | 30.0% | |
| AATTGGTACAGGTGAAAAAT+TGG | + | chr4.4:43335618-43335637 | None:intergenic | 30.0% | |
| ACAAAATTGCAGGTTCTTTA+CGG | - | chr4.4:43337208-43337227 | MS.gene64648:intron | 30.0% | |
| ACAATAAACAATGTTCCATC+TGG | - | chr4.4:43335401-43335420 | MS.gene64648:intron | 30.0% | |
| ACAATCGAATAATGCTAGTT+GGG | + | chr4.4:43339553-43339572 | None:intergenic | 30.0% | |
| ACACTCATTCAATCATTGTT+AGG | + | chr4.4:43336568-43336587 | None:intergenic | 30.0% | |
| AGAATAGTAGAATGATCATG+GGG | - | chr4.4:43334751-43334770 | MS.gene64648:intron | 30.0% | |
| AGATGGAACATTGTTTATTG+TGG | + | chr4.4:43335402-43335421 | None:intergenic | 30.0% | |
| ATCAAAAGGTGAACTATCAT+TGG | + | chr4.4:43337059-43337078 | None:intergenic | 30.0% | |
| ATCATCTACCTCAACATTAA+GGG | - | chr4.4:43339646-43339665 | MS.gene64648:CDS | 30.0% | |
| ATGCTTGAAAAGAATTGTAG+TGG | + | chr4.4:43336214-43336233 | None:intergenic | 30.0% | |
| ATTCACAAAAACTAACCTTG+CGG | + | chr4.4:43339464-43339483 | None:intergenic | 30.0% | |
| ATTCTCGTTCATCAAAATGT+TGG | + | chr4.4:43334653-43334672 | None:intergenic | 30.0% | |
| ATTTCTTTCAGTAACAACAG+AGG | - | chr4.4:43339312-43339331 | MS.gene64648:intron | 30.0% | |
| CAAAATTGGATGTAGTTTCT+GGG | - | chr4.4:43339913-43339932 | MS.gene64648:intron | 30.0% | |
| CAAAGAAAAGGTTTCATGAT+AGG | + | chr4.4:43338765-43338784 | None:intergenic | 30.0% | |
| CAATAAACAATGTTCCATCT+GGG | - | chr4.4:43335402-43335421 | MS.gene64648:intron | 30.0% | |
| CTATAAAAATGCATACCTTG+TGG | + | chr4.4:43336009-43336028 | None:intergenic | 30.0% | |
| GAAGAATAGTAGAATGATCA+TGG | - | chr4.4:43334749-43334768 | MS.gene64648:intron | 30.0% | |
| GGCAACATTTATTGACATTA+AGG | + | chr4.4:43337646-43337665 | None:intergenic | 30.0% | |
| TAATCGACACTTTACAACAA+AGG | + | chr4.4:43339682-43339701 | None:intergenic | 30.0% | |
| TAGAGATTAGAGAATAGAAC+GGG | - | chr4.4:43336462-43336481 | MS.gene64648:CDS | 30.0% | |
| TAGTCACTTACTAGTTGTAA+CGG | - | chr4.4:43336732-43336751 | MS.gene64648:intron | 30.0% | |
| TATTTAAACACTACGTTTCG+TGG | - | chr4.4:43334721-43334740 | MS.gene64648:intron | 30.0% | |
| TCAAAATTGGATGTAGTTTC+TGG | - | chr4.4:43339912-43339931 | MS.gene64648:intron | 30.0% | |
| TGTAATTGACACCAAATTGA+TGG | + | chr4.4:43339744-43339763 | None:intergenic | 30.0% | |
| TGTATGAACTTGTGTATGTT+TGG | + | chr4.4:43339172-43339191 | None:intergenic | 30.0% | |
| TGTTCAGTGAAATAACATTG+TGG | + | chr4.4:43338691-43338710 | None:intergenic | 30.0% | |
| TTGTTTATTGTGGAGTTTCT+TGG | + | chr4.4:43335392-43335411 | None:intergenic | 30.0% | |
| ! | AACACAAACTCTTTTGACAT+TGG | - | chr4.4:43336654-43336673 | MS.gene64648:intron | 30.0% |
| ! | ACATAAACTCTTTTGACCAT+TGG | + | chr4.4:43336301-43336320 | None:intergenic | 30.0% |
| ! | CATCTCTAAATCAGTCTTTT+AGG | - | chr4.4:43338437-43338456 | MS.gene64648:intron | 30.0% |
| ! | CTAAAAGACTGATTTAGAGA+TGG | + | chr4.4:43338439-43338458 | None:intergenic | 30.0% |
| ! | CTATCATGAAACCTTTTCTT+TGG | - | chr4.4:43338763-43338782 | MS.gene64648:intron | 30.0% |
| ! | GAAATTTATGCTCTCTCTTT+TGG | - | chr4.4:43337465-43337484 | MS.gene64648:intron | 30.0% |
| ! | GTCAAAAGAGTTTGTGTTTT+AGG | + | chr4.4:43336652-43336671 | None:intergenic | 30.0% |
| ! | TGCTCTTGATAGGTTTTTAT+AGG | - | chr4.4:43337560-43337579 | MS.gene64648:intron | 30.0% |
| ! | TGGTAATGCAGATTATGATA+TGG | - | chr4.4:43337771-43337790 | MS.gene64648:CDS | 30.0% |
| ! | TGTTATTTACGGCATGAATA+TGG | + | chr4.4:43337003-43337022 | None:intergenic | 30.0% |
| !! | AACTAACTCTCTTACTTTTG+TGG | - | chr4.4:43336611-43336630 | MS.gene64648:intron | 30.0% |
| !! | AATAGGATAAATAGTGGATG+AGG | - | chr4.4:43336379-43336398 | MS.gene64648:CDS | 30.0% |
| !! | ACATTTTGATGAACGAGAAT+CGG | - | chr4.4:43334653-43334672 | MS.gene64648:intron | 30.0% |
| !! | ATGATTATCTTCGGTTTTGA+TGG | - | chr4.4:43337407-43337426 | MS.gene64648:intron | 30.0% |
| !! | CAAAAGAGTTTGTGTTTTAG+GGG | + | chr4.4:43336650-43336669 | None:intergenic | 30.0% |
| !! | CATTCAAATCGCTTTGATTT+TGG | - | chr4.4:43338276-43338295 | MS.gene64648:intron | 30.0% |
| !! | CATTTTGATGAATGAGATTC+TGG | - | chr4.4:43334571-43334590 | MS.gene64648:intron | 30.0% |
| !! | TGCTTTAGTATTGACTTGTT+TGG | - | chr4.4:43338885-43338904 | MS.gene64648:CDS | 30.0% |
| !! | TTGTTGTAAAGTGTCGATTA+TGG | - | chr4.4:43339682-43339701 | MS.gene64648:CDS | 30.0% |
| !!! | ACTACATCCAATTTTGATTC+AGG | + | chr4.4:43339909-43339928 | None:intergenic | 30.0% |
| !!! | CAATTATTTTGACTAAACGG+AGG | + | chr4.4:43335284-43335303 | None:intergenic | 30.0% |
| !!! | TTCTTCAATCCTTCCTTTTT+TGG | - | chr4.4:43338995-43339014 | MS.gene64648:CDS | 30.0% |
| !!! | TTGATAAGAGTTGCTTTTGA+TGG | - | chr4.4:43339987-43340006 | MS.gene64648:intron | 30.0% |
| AAAACCTATCAAGAGCAACA+TGG | + | chr4.4:43337557-43337576 | None:intergenic | 35.0% | |
| AAACCTATCAAGAGCAACAT+GGG | + | chr4.4:43337556-43337575 | None:intergenic | 35.0% | |
| AAACTACCTCACTGTAATTC+TGG | + | chr4.4:43336528-43336547 | None:intergenic | 35.0% | |
| AAATATCCGATCCATGTTGA+TGG | + | chr4.4:43338102-43338121 | None:intergenic | 35.0% | |
| AAGAACAACATTATCCTGCA+AGG | + | chr4.4:43339598-43339617 | None:intergenic | 35.0% | |
| AAGATCAATTCCAAGAGCAA+GGG | + | chr4.4:43338566-43338585 | None:intergenic | 35.0% | |
| AATCATTGTTAGGAGAGAAG+AGG | + | chr4.4:43336558-43336577 | None:intergenic | 35.0% | |
| AATTCTCCAAATGCAGTTTC+TGG | - | chr4.4:43338340-43338359 | MS.gene64648:intron | 35.0% | |
| ACCAGTGTGATGAAAAATTG+GGG | + | chr4.4:43335225-43335244 | None:intergenic | 35.0% | |
| ACCATTTGTAAATCAGTGCT+AGG | + | chr4.4:43336698-43336717 | None:intergenic | 35.0% | |
| ACTATTGCTATGACATTCTG+AGG | + | chr4.4:43339716-43339735 | None:intergenic | 35.0% | |
| ACTGCATTTGGAGAATTTGA+AGG | + | chr4.4:43338337-43338356 | None:intergenic | 35.0% | |
| AGAAAACCAGAATTACAGTG+AGG | - | chr4.4:43336519-43336538 | MS.gene64648:CDS | 35.0% | |
| AGAATTACAGTGAGGTAGTT+TGG | - | chr4.4:43336527-43336546 | MS.gene64648:CDS | 35.0% | |
| AGACAATTAGCCCAAAGAAA+AGG | + | chr4.4:43338777-43338796 | None:intergenic | 35.0% | |
| AGATTATGGATTTGGAGATG+GGG | - | chr4.4:43340024-43340043 | MS.gene64648:intron | 35.0% | |
| ATAAACAATGTTCCATCTGG+GGG | - | chr4.4:43335404-43335423 | MS.gene64648:intron | 35.0% | |
| ATACAGAGAAACAGCAAGAT+AGG | - | chr4.4:43339811-43339830 | MS.gene64648:intron | 35.0% | |
| ATGCAAATCTTCCACTAGAA+AGG | + | chr4.4:43335451-43335470 | None:intergenic | 35.0% | |
| CAATCGAATAATGCTAGTTG+GGG | + | chr4.4:43339552-43339571 | None:intergenic | 35.0% | |
| CACCAGTGTGATGAAAAATT+GGG | + | chr4.4:43335226-43335245 | None:intergenic | 35.0% | |
| CACTACCAAACTAGATCTTT+GGG | - | chr4.4:43334786-43334805 | MS.gene64648:intron | 35.0% | |
| CAGAAATACTTGTTTCAGAG+AGG | + | chr4.4:43338255-43338274 | None:intergenic | 35.0% | |
| CAGATTATGGATTTGGAGAT+GGG | - | chr4.4:43340023-43340042 | MS.gene64648:intron | 35.0% | |
| CATCATCTACCTCAACATTA+AGG | - | chr4.4:43339645-43339664 | MS.gene64648:CDS | 35.0% | |
| CTGCAAAATACAATTGGTAC+AGG | + | chr4.4:43335629-43335648 | None:intergenic | 35.0% | |
| GAAGTAAACCAGAAAATGCT+TGG | + | chr4.4:43335254-43335273 | None:intergenic | 35.0% | |
| GAATTACAGTGAGGTAGTTT+GGG | - | chr4.4:43336528-43336547 | MS.gene64648:CDS | 35.0% | |
| GGATAGCTGCAAAATACAAT+TGG | + | chr4.4:43335635-43335654 | None:intergenic | 35.0% | |
| GGATTTAATAGTGGCACAAA+TGG | - | chr4.4:43335721-43335740 | MS.gene64648:intron | 35.0% | |
| GGGATTAATGTCAGAATAAC+TGG | + | chr4.4:43339232-43339251 | None:intergenic | 35.0% | |
| GGGTAATTCACTGATAGAAT+GGG | - | chr4.4:43336482-43336501 | MS.gene64648:CDS | 35.0% | |
| GGTAATTCACTGATAGAATG+GGG | - | chr4.4:43336483-43336502 | MS.gene64648:CDS | 35.0% | |
| GTCAAAAGAGTTTATGTCAG+AGG | - | chr4.4:43336304-43336323 | MS.gene64648:CDS | 35.0% | |
| GTGTGTATCATTATTGCAGA+AGG | + | chr4.4:43337188-43337207 | None:intergenic | 35.0% | |
| GTTCTCATCTGTAAATAACC+AGG | - | chr4.4:43338069-43338088 | MS.gene64648:intron | 35.0% | |
| TAACTAATAGCCACCAAAGT+AGG | - | chr4.4:43336330-43336349 | MS.gene64648:CDS | 35.0% | |
| TAAGATCAATTCCAAGAGCA+AGG | + | chr4.4:43338567-43338586 | None:intergenic | 35.0% | |
| TACCACCTGTACACATAATA+TGG | + | chr4.4:43337756-43337775 | None:intergenic | 35.0% | |
| TATGTGGCAAACTGTCAAAA+AGG | - | chr4.4:43334687-43334706 | MS.gene64648:intron | 35.0% | |
| TCAAATCTTCAAGATAGTGC+TGG | - | chr4.4:43335155-43335174 | MS.gene64648:intron | 35.0% | |
| TCACTACCAAACTAGATCTT+TGG | - | chr4.4:43334785-43334804 | MS.gene64648:intron | 35.0% | |
| TCATCCTGATTACACTTAAC+AGG | + | chr4.4:43338525-43338544 | None:intergenic | 35.0% | |
| TCATCTACCTCAACATTAAG+GGG | - | chr4.4:43339647-43339666 | MS.gene64648:CDS | 35.0% | |
| TCTGACCATATTATGTGTAC+AGG | - | chr4.4:43337748-43337767 | MS.gene64648:CDS | 35.0% | |
| TGATACACACACAAAATTGC+AGG | - | chr4.4:43337198-43337217 | MS.gene64648:intron | 35.0% | |
| TGATCCAAGCTCATTTGAAA+CGG | - | chr4.4:43339437-43339456 | MS.gene64648:CDS | 35.0% | |
| TGTTCTTTCGTATGATATGC+TGG | - | chr4.4:43339611-43339630 | MS.gene64648:intron | 35.0% | |
| TTCAATTCCCCTTAATGTTG+AGG | + | chr4.4:43339657-43339676 | None:intergenic | 35.0% | |
| TTTATGCCTCATATGCTTGT+TGG | - | chr4.4:43334960-43334979 | MS.gene64648:intron | 35.0% | |
| TTTCGATTACCAATAGATGC+AGG | + | chr4.4:43335772-43335791 | None:intergenic | 35.0% | |
| TTTCTTGTGTGCTATATCAG+TGG | - | chr4.4:43337362-43337381 | MS.gene64648:intron | 35.0% | |
| ! | AAAATTGAAGTGCCTCCATT+CGG | + | chr4.4:43338172-43338191 | None:intergenic | 35.0% |
| ! | AATTTTTCATCACACTGGTG+GGG | - | chr4.4:43335226-43335245 | MS.gene64648:intron | 35.0% |
| ! | ACACAACACTCATTCGTTTT+AGG | + | chr4.4:43340079-43340098 | None:intergenic | 35.0% |
| ! | CAATTTTTCATCACACTGGT+GGG | - | chr4.4:43335225-43335244 | MS.gene64648:intron | 35.0% |
| ! | GTGACGACATCTTTTTATTC+AGG | - | chr4.4:43336911-43336930 | MS.gene64648:intron | 35.0% |
| ! | TTCAAAGGTGTACTGTTGTT+TGG | - | chr4.4:43337315-43337334 | MS.gene64648:intron | 35.0% |
| ! | TTGTGCCACTATTAAATCCA+GGG | + | chr4.4:43335720-43335739 | None:intergenic | 35.0% |
| ! | TTTATGCTCTCTCTTTTGGA+AGG | - | chr4.4:43337469-43337488 | MS.gene64648:intron | 35.0% |
| ! | TTTGTGCCACTATTAAATCC+AGG | + | chr4.4:43335721-43335740 | None:intergenic | 35.0% |
| ! | TTTTATTCAGGATCTCCTCA+GGG | - | chr4.4:43336923-43336942 | MS.gene64648:intron | 35.0% |
| ! | TTTTTATTCAGGATCTCCTC+AGG | - | chr4.4:43336922-43336941 | MS.gene64648:intron | 35.0% |
| !! | AACACTCATTCGTTTTAGGT+AGG | + | chr4.4:43340075-43340094 | None:intergenic | 35.0% |
| !! | AAGCGTGTTACTTTATGCTA+TGG | - | chr4.4:43336832-43336851 | MS.gene64648:CDS | 35.0% |
| !! | ACAAGACTTTTAAGTCTCCA+TGG | - | chr4.4:43338626-43338645 | MS.gene64648:intron | 35.0% |
| !! | ACACTCATTCGTTTTAGGTA+GGG | + | chr4.4:43340074-43340093 | None:intergenic | 35.0% |
| !! | ATCTTGCTGTTTCTCTGTAT+TGG | + | chr4.4:43339811-43339830 | None:intergenic | 35.0% |
| !! | ATGACTCTGGAACAAGATAA+AGG | + | chr4.4:43339514-43339533 | None:intergenic | 35.0% |
| !! | CATTTTGATGAACGAGAATC+GGG | - | chr4.4:43334654-43334673 | MS.gene64648:intron | 35.0% |
| !! | CTAAATTTTGGTGGAAACAG+TGG | - | chr4.4:43335931-43335950 | MS.gene64648:intron | 35.0% |
| !! | CTTGGTTCTCGTCTAAATTT+TGG | - | chr4.4:43335919-43335938 | MS.gene64648:CDS | 35.0% |
| !! | TCCTAGCACTGATTTACAAA+TGG | - | chr4.4:43336694-43336713 | MS.gene64648:intron | 35.0% |
| !! | TCTCTCTCGTTTTTGTGATA+GGG | - | chr4.4:43336808-43336827 | MS.gene64648:CDS | 35.0% |
| !! | TCTTGCTGTTTCTCTGTATT+GGG | + | chr4.4:43339810-43339829 | None:intergenic | 35.0% |
| !!! | ACGAAATCCTTTTTCAGTGT+AGG | - | chr4.4:43338203-43338222 | MS.gene64648:intron | 35.0% |
| !!! | CGAAATCCTTTTTCAGTGTA+GGG | - | chr4.4:43338204-43338223 | MS.gene64648:intron | 35.0% |
| !!! | TCTTTTGCTGTTGATATTGC+TGG | + | chr4.4:43338390-43338409 | None:intergenic | 35.0% |
| AAAGGCCCAAAGATCTAGTT+TGG | + | chr4.4:43334794-43334813 | None:intergenic | 40.0% | |
| AAATCATCTGTCAGACAGCT+AGG | + | chr4.4:43339852-43339871 | None:intergenic | 40.0% | |
| AACAACATTATCCTGCAAGG+AGG | + | chr4.4:43339595-43339614 | None:intergenic | 40.0% | |
| AACAGTACACCTTTGAATCC+CGG | + | chr4.4:43337312-43337331 | None:intergenic | 40.0% | |
| AACGAATGCAACAATGACTC+TGG | + | chr4.4:43339527-43339546 | None:intergenic | 40.0% | |
| AACTAACTCTCCTACTTTGG+TGG | + | chr4.4:43336343-43336362 | None:intergenic | 40.0% | |
| AAGGAGGAGTTGTACATTAG+AGG | + | chr4.4:43339579-43339598 | None:intergenic | 40.0% | |
| AAGGGTTGCACAATCTTCAT+GGG | - | chr4.4:43335330-43335349 | MS.gene64648:intron | 40.0% | |
| AATAGTGGCACAAATGGAGT+TGG | - | chr4.4:43335727-43335746 | MS.gene64648:intron | 40.0% | |
| ACATCTTTCTCTAGTCAGTC+TGG | - | chr4.4:43335191-43335210 | MS.gene64648:intron | 40.0% | |
| ACCACAATCGATACTCTTTG+TGG | + | chr4.4:43339347-43339366 | None:intergenic | 40.0% | |
| AGACTGACTAGAGAAAGATG+TGG | + | chr4.4:43335192-43335211 | None:intergenic | 40.0% | |
| AGAGAAACAGCAAGATAGGT+AGG | - | chr4.4:43339815-43339834 | MS.gene64648:intron | 40.0% | |
| AGATGATGATTCCCATGTCT+AGG | - | chr4.4:43335054-43335073 | MS.gene64648:intron | 40.0% | |
| AGCCTGCATTTCCCAAAATT+GGG | + | chr4.4:43335819-43335838 | None:intergenic | 40.0% | |
| ATGCTTTCATTCAGCAGATG+GGG | - | chr4.4:43337954-43337973 | MS.gene64648:intron | 40.0% | |
| ATGGCATTTGAAGACGAAAC+TGG | + | chr4.4:43338420-43338439 | None:intergenic | 40.0% | |
| ATGGTCAGAAGAATCAGCTA+AGG | - | chr4.4:43338645-43338664 | MS.gene64648:intron | 40.0% | |
| ATTCCCATGTTGCTCTTGAT+AGG | - | chr4.4:43337550-43337569 | MS.gene64648:intron | 40.0% | |
| CAATCTACACCAGATCCATA+TGG | - | chr4.4:43338490-43338509 | MS.gene64648:intron | 40.0% | |
| CATGCTTTCATTCAGCAGAT+GGG | - | chr4.4:43337953-43337972 | MS.gene64648:intron | 40.0% | |
| CATTGTGGCACATTAAACTC+TGG | + | chr4.4:43338676-43338695 | None:intergenic | 40.0% | |
| CCAAAGTAGGAGAGTTAGTT+AGG | - | chr4.4:43336343-43336362 | MS.gene64648:CDS | 40.0% | |
| CCACCAGTGTGATGAAAAAT+TGG | + | chr4.4:43335227-43335246 | None:intergenic | 40.0% | |
| CCTAACTAACTCTCCTACTT+TGG | + | chr4.4:43336346-43336365 | None:intergenic | 40.0% | |
| CGGGTAATTCACTGATAGAA+TGG | - | chr4.4:43336481-43336500 | MS.gene64648:CDS | 40.0% | |
| CTTACTAGTTGTAACGGTGA+TGG | - | chr4.4:43336738-43336757 | MS.gene64648:CDS | 40.0% | |
| CTTTCAGTAACAACAGAGGT+TGG | - | chr4.4:43339316-43339335 | MS.gene64648:intron | 40.0% | |
| GACATGGGAATCATCATCTT+AGG | + | chr4.4:43335053-43335072 | None:intergenic | 40.0% | |
| GACCATATTATGTGTACAGG+TGG | - | chr4.4:43337751-43337770 | MS.gene64648:CDS | 40.0% | |
| GCAGATTATGGATTTGGAGA+TGG | - | chr4.4:43340022-43340041 | MS.gene64648:intron | 40.0% | |
| GCATTATCACAGGTTTGTGT+TGG | - | chr4.4:43335488-43335507 | MS.gene64648:CDS | 40.0% | |
| GGAAACCCTGGATTTAATAG+TGG | - | chr4.4:43335712-43335731 | MS.gene64648:intron | 40.0% | |
| GGAATTGATCTTACAACCCT+TGG | - | chr4.4:43338574-43338593 | MS.gene64648:intron | 40.0% | |
| GGGAAGTCATTGAGATCAAA+AGG | + | chr4.4:43337073-43337092 | None:intergenic | 40.0% | |
| GTAATAAAGCCAGACACTGA+AGG | + | chr4.4:43337519-43337538 | None:intergenic | 40.0% | |
| TAAACACTACGTTTCGTGGA+TGG | - | chr4.4:43334725-43334744 | MS.gene64648:intron | 40.0% | |
| TACGGCATGAATATGGCTTT+GGG | + | chr4.4:43336996-43337015 | None:intergenic | 40.0% | |
| TCTTCTCCATCAACATGGAT+CGG | - | chr4.4:43338093-43338112 | MS.gene64648:intron | 40.0% | |
| TCTTTGCAGTCTTCTCTGAA+CGG | - | chr4.4:43335125-43335144 | MS.gene64648:intron | 40.0% | |
| TGATTGTGATAGGAGACCAA+TGG | - | chr4.4:43336282-43336301 | MS.gene64648:CDS | 40.0% | |
| TGGCATTTGAAGACGAAACT+GGG | + | chr4.4:43338419-43338438 | None:intergenic | 40.0% | |
| TGGTCAGAAGAATCAGCTAA+GGG | - | chr4.4:43338646-43338665 | MS.gene64648:intron | 40.0% | |
| TGTCATGAAGTTGCTCTTTC+TGG | + | chr4.4:43337804-43337823 | None:intergenic | 40.0% | |
| TGTTGATATTGCTGGATGAG+CGG | + | chr4.4:43338382-43338401 | None:intergenic | 40.0% | |
| TTACGGCATGAATATGGCTT+TGG | + | chr4.4:43336997-43337016 | None:intergenic | 40.0% | |
| TTGGCCTGTTAAGTGTAATC+AGG | - | chr4.4:43338518-43338537 | MS.gene64648:intron | 40.0% | |
| TTTAATGTTCCCAACATGCC+TGG | - | chr4.4:43335356-43335375 | MS.gene64648:intron | 40.0% | |
| TTTATTCAGGATCTCCTCAG+GGG | - | chr4.4:43336924-43336943 | MS.gene64648:intron | 40.0% | |
| TTTGAAGACGAAACTGGGAT+TGG | + | chr4.4:43338414-43338433 | None:intergenic | 40.0% | |
| ! | AAACCTGTGATAATGCGACA+GGG | + | chr4.4:43335484-43335503 | None:intergenic | 40.0% |
| ! | AACTTTTCTACTCCGAATGG+AGG | - | chr4.4:43338157-43338176 | MS.gene64648:intron | 40.0% |
| ! | AATTCTTATCCTAGTGCTGG+AGG | - | chr4.4:43336962-43336981 | MS.gene64648:intron | 40.0% |
| ! | ACTGAAGGATTGTGTTGTTG+CGG | + | chr4.4:43338031-43338050 | None:intergenic | 40.0% |
| ! | ATCGGGAGATTTGAAGTATG+TGG | - | chr4.4:43334671-43334690 | MS.gene64648:intron | 40.0% |
| ! | ATCTTCAAGATAGTGCTGGA+CGG | - | chr4.4:43335159-43335178 | MS.gene64648:intron | 40.0% |
| ! | CCAATTTTTCATCACACTGG+TGG | - | chr4.4:43335224-43335243 | MS.gene64648:intron | 40.0% |
| ! | GGTTCTCGTCTAAATTTTGG+TGG | - | chr4.4:43335922-43335941 | MS.gene64648:intron | 40.0% |
| ! | TCATGGTTCTGTTGACCAAT+GGG | + | chr4.4:43337255-43337274 | None:intergenic | 40.0% |
| ! | TCCCCAATTTTTCATCACAC+TGG | - | chr4.4:43335221-43335240 | MS.gene64648:intron | 40.0% |
| ! | TGCAACTTTTCTACTCCGAA+TGG | - | chr4.4:43338154-43338173 | MS.gene64648:intron | 40.0% |
| ! | TGTATTTTGCAGCTATCCCA+TGG | - | chr4.4:43335637-43335656 | MS.gene64648:intron | 40.0% |
| ! | TTAGCTGATTCTTCTGACCA+TGG | + | chr4.4:43338646-43338665 | None:intergenic | 40.0% |
| !! | ACCACAAAGAGTATCGATTG+TGG | - | chr4.4:43339343-43339362 | MS.gene64648:intron | 40.0% |
| !! | CACTCATTCGTTTTAGGTAG+GGG | + | chr4.4:43340073-43340092 | None:intergenic | 40.0% |
| !! | CCAAATGCAGTTTCTGGTAT+GGG | - | chr4.4:43338346-43338365 | MS.gene64648:intron | 40.0% |
| !! | CTCTCTCTCGTTTTTGTGAT+AGG | - | chr4.4:43336807-43336826 | MS.gene64648:CDS | 40.0% |
| !! | CTCTCTTTTGGAAGGTCTTT+TGG | - | chr4.4:43337477-43337496 | MS.gene64648:intron | 40.0% |
| !! | CTTGCTGTTTCTCTGTATTG+GGG | + | chr4.4:43339809-43339828 | None:intergenic | 40.0% |
| !! | TCCAAATGCAGTTTCTGGTA+TGG | - | chr4.4:43338345-43338364 | MS.gene64648:intron | 40.0% |
| !! | TTGATTTTGGTGTAGACCAG+CGG | - | chr4.4:43338289-43338308 | MS.gene64648:intron | 40.0% |
| !!! | ATTGGGAGTATCCCCAATTT+TGG | - | chr4.4:43335804-43335823 | MS.gene64648:intron | 40.0% |
| !!! | TTGGGAGTATCCCCAATTTT+GGG | - | chr4.4:43335805-43335824 | MS.gene64648:intron | 40.0% |
| AACAGGCCAAGCAAACCATA+TGG | + | chr4.4:43338508-43338527 | None:intergenic | 45.0% | |
| AACAGTGGATCAGGTGCTTT+AGG | - | chr4.4:43335946-43335965 | MS.gene64648:intron | 45.0% | |
| AACGCTTGTACCTCCTCTAT+TGG | + | chr4.4:43335689-43335708 | None:intergenic | 45.0% | |
| AATGTACAACTCCTCCTTGC+AGG | - | chr4.4:43339581-43339600 | MS.gene64648:intron | 45.0% | |
| AATTGTTAGGTTCCTGCTGC+AGG | - | chr4.4:43335299-43335318 | MS.gene64648:intron | 45.0% | |
| AGCTCTGTGGGAAACATGAT+TGG | - | chr4.4:43335850-43335869 | MS.gene64648:intron | 45.0% | |
| AGTAGAATGATCATGGGGTC+TGG | - | chr4.4:43334756-43334775 | MS.gene64648:intron | 45.0% | |
| ATGAGCAGTGTACTTCCACA+AGG | - | chr4.4:43335991-43336010 | MS.gene64648:intron | 45.0% | |
| ATGATTGGAGGGGGGAATAT+TGG | - | chr4.4:43335865-43335884 | MS.gene64648:intron | 45.0% | |
| CAAGCAAGCACATACGAAAG+AGG | - | chr4.4:43339399-43339418 | MS.gene64648:CDS | 45.0% | |
| CAAGCAGGAAACCTTTCTAG+TGG | - | chr4.4:43335437-43335456 | MS.gene64648:CDS | 45.0% | |
| CAAGGGTTGCACAATCTTCA+TGG | - | chr4.4:43335329-43335348 | MS.gene64648:intron | 45.0% | |
| CACAATCCTTCAGTTAGCAG+TGG | - | chr4.4:43338037-43338056 | MS.gene64648:intron | 45.0% | |
| CAGATGCTTGACAGACAACA+AGG | + | chr4.4:43337594-43337613 | None:intergenic | 45.0% | |
| CAGGATCTTCTCCATCAACA+TGG | - | chr4.4:43338088-43338107 | MS.gene64648:intron | 45.0% | |
| CAGGATGAATGATCTTGACC+TGG | - | chr4.4:43338537-43338556 | MS.gene64648:intron | 45.0% | |
| CATTCAGGAGTCACCAATAG+AGG | - | chr4.4:43335673-43335692 | MS.gene64648:intron | 45.0% | |
| CCAAGCAAACCATATGGATC+TGG | + | chr4.4:43338502-43338521 | None:intergenic | 45.0% | |
| CCATCTGCTGAATGAAAGCA+TGG | + | chr4.4:43337955-43337974 | None:intergenic | 45.0% | |
| CCATGCTTTCATTCAGCAGA+TGG | - | chr4.4:43337952-43337971 | MS.gene64648:intron | 45.0% | |
| CCCATACCAGAAACTGCATT+TGG | + | chr4.4:43338349-43338368 | None:intergenic | 45.0% | |
| CGAAATGCTGTTCCAGGATT+GGG | - | chr4.4:43335787-43335806 | MS.gene64648:intron | 45.0% | |
| CTCAGGGGATTTCAATGCAA+GGG | - | chr4.4:43336939-43336958 | MS.gene64648:intron | 45.0% | |
| CTGTGGGAAACATGATTGGA+GGG | - | chr4.4:43335854-43335873 | MS.gene64648:intron | 45.0% | |
| GACTGATAGGCAGAATGAGA+TGG | + | chr4.4:43338127-43338146 | None:intergenic | 45.0% | |
| GAGAGCTCAGTCTCGTAATT+AGG | + | chr4.4:43336792-43336811 | None:intergenic | 45.0% | |
| GAGCCTGCATTTCCCAAAAT+TGG | + | chr4.4:43335820-43335839 | None:intergenic | 45.0% | |
| GCACAATTACCTTCAGTGTC+TGG | - | chr4.4:43337507-43337526 | MS.gene64648:intron | 45.0% | |
| GCAGGTTCTTTACGGAATCA+GGG | - | chr4.4:43337216-43337235 | MS.gene64648:intron | 45.0% | |
| GCCTGCATTTCCCAAAATTG+GGG | + | chr4.4:43335818-43335837 | None:intergenic | 45.0% | |
| GGGAATTCTTATCCTAGTGC+TGG | - | chr4.4:43336959-43336978 | MS.gene64648:intron | 45.0% | |
| GGTAATCGAAATGCTGTTCC+AGG | - | chr4.4:43335781-43335800 | MS.gene64648:intron | 45.0% | |
| GTTGATATTGCTGGATGAGC+GGG | + | chr4.4:43338381-43338400 | None:intergenic | 45.0% | |
| GTTTCTCTGTATTGGGGTTG+AGG | + | chr4.4:43339803-43339822 | None:intergenic | 45.0% | |
| TAATGCGACAGGGAGATTGT+TGG | + | chr4.4:43335474-43335493 | None:intergenic | 45.0% | |
| TAGGACGACTTGACAGTTGA+GGG | + | chr4.4:43337093-43337112 | None:intergenic | 45.0% | |
| TATCCCATGGAAGTTCCCAT+GGG | - | chr4.4:43335650-43335669 | MS.gene64648:intron | 45.0% | |
| TCAAAACTCACGTGAAGAGC+AGG | + | chr4.4:43338718-43338737 | None:intergenic | 45.0% | |
| TCAGTAACAACAGAGGTTGG+TGG | - | chr4.4:43339319-43339338 | MS.gene64648:intron | 45.0% | |
| TCATTCTGCCTATCAGTCAC+AGG | - | chr4.4:43338129-43338148 | MS.gene64648:intron | 45.0% | |
| TCGAAATGCTGTTCCAGGAT+TGG | - | chr4.4:43335786-43335805 | MS.gene64648:intron | 45.0% | |
| TCTGTGGGAAACATGATTGG+AGG | - | chr4.4:43335853-43335872 | MS.gene64648:intron | 45.0% | |
| TCTTTACGGAATCAGGGTCT+TGG | - | chr4.4:43337222-43337241 | MS.gene64648:intron | 45.0% | |
| TGAAGATTTCCCTGCATTGC+CGG | - | chr4.4:43337290-43337309 | MS.gene64648:intron | 45.0% | |
| TGCAGGTTCTTTACGGAATC+AGG | - | chr4.4:43337215-43337234 | MS.gene64648:intron | 45.0% | |
| TGGACAGCTTCTTGTATGCT+TGG | - | chr4.4:43334838-43334857 | MS.gene64648:intron | 45.0% | |
| TGTGGGAAACATGATTGGAG+GGG | - | chr4.4:43335855-43335874 | MS.gene64648:intron | 45.0% | |
| TTTAGACGAGAACCAAGACC+AGG | + | chr4.4:43335916-43335935 | None:intergenic | 45.0% | |
| TTTGGTGGAAACAGTGGATC+AGG | - | chr4.4:43335937-43335956 | MS.gene64648:intron | 45.0% | |
| ! | AAGGATTGTGTTGTTGCGGT+TGG | + | chr4.4:43338027-43338046 | None:intergenic | 45.0% |
| ! | AATATTGGAAGGACTGGTGG+AGG | - | chr4.4:43335880-43335899 | MS.gene64648:intron | 45.0% |
| ! | AGGATTGTGTTGTTGCGGTT+GGG | + | chr4.4:43338026-43338045 | None:intergenic | 45.0% |
| ! | CAAACCTGTGATAATGCGAC+AGG | + | chr4.4:43335485-43335504 | None:intergenic | 45.0% |
| ! | CATGTTGATGGAGAAGATCC+TGG | + | chr4.4:43338090-43338109 | None:intergenic | 45.0% |
| ! | CTCATGGTTCTGTTGACCAA+TGG | + | chr4.4:43337256-43337275 | None:intergenic | 45.0% |
| ! | GTGTATGTTTGGTTCCCGTT+TGG | + | chr4.4:43339161-43339180 | None:intergenic | 45.0% |
| ! | TGAGATTCTGGAGACTCTCA+AGG | - | chr4.4:43334583-43334602 | MS.gene64648:intron | 45.0% |
| !! | CCAGATCCATATGGTTTGCT+TGG | - | chr4.4:43338499-43338518 | MS.gene64648:intron | 45.0% |
| !! | GTTTAAGAGAGCACCCAACA+TGG | - | chr4.4:43339365-43339384 | MS.gene64648:intron | 45.0% |
| !! | GTTTTAGGTAGGGGAGAAGA+GGG | + | chr4.4:43340064-43340083 | None:intergenic | 45.0% |
| !! | TCCCCAATTTTGGGAAATGC+AGG | - | chr4.4:43335814-43335833 | MS.gene64648:intron | 45.0% |
| !! | TCTCGAATCACTAGCTCTGT+GGG | - | chr4.4:43335838-43335857 | MS.gene64648:intron | 45.0% |
| !! | TTTCTTGGTGTGAGAGTACC+AGG | + | chr4.4:43335377-43335396 | None:intergenic | 45.0% |
| AAACTCACGTGAAGAGCAGG+TGG | + | chr4.4:43338715-43338734 | None:intergenic | 50.0% | |
| AATGCCCATGGGAACTTCCA+TGG | + | chr4.4:43335657-43335676 | None:intergenic | 50.0% | |
| ACACTGCCACTGCTAACTGA+AGG | + | chr4.4:43338046-43338065 | None:intergenic | 50.0% | |
| AGAAATCGCTGCTGTAGACG+AGG | - | chr4.4:43340116-43340135 | MS.gene64648:intron | 50.0% | |
| AGAATGATCATGGGGTCTGG+AGG | - | chr4.4:43334759-43334778 | MS.gene64648:intron | 50.0% | |
| AGATGCAGGAAACCCAGGAA+TGG | + | chr4.4:43335758-43335777 | None:intergenic | 50.0% | |
| AGCAGGCCCTACACTGAAAA+AGG | + | chr4.4:43338213-43338232 | None:intergenic | 50.0% | |
| AGTGGCACAAATGGAGTTGG+TGG | - | chr4.4:43335730-43335749 | MS.gene64648:intron | 50.0% | |
| AGTTCTGCTGGAGGATCTCA+AGG | - | chr4.4:43337112-43337131 | MS.gene64648:intron | 50.0% | |
| ATGCCCATGGGAACTTCCAT+GGG | + | chr4.4:43335656-43335675 | None:intergenic | 50.0% | |
| ATTGGGGATACTCCCAATCC+TGG | + | chr4.4:43335802-43335821 | None:intergenic | 50.0% | |
| CCAATAGATGCAGGAAACCC+AGG | + | chr4.4:43335763-43335782 | None:intergenic | 50.0% | |
| CCTCAGGGGATTTCAATGCA+AGG | - | chr4.4:43336938-43336957 | MS.gene64648:intron | 50.0% | |
| CCTGGGTTTCCTGCATCTAT+TGG | - | chr4.4:43335760-43335779 | MS.gene64648:intron | 50.0% | |
| CCTTGCATTGAAATCCCCTG+AGG | + | chr4.4:43336941-43336960 | None:intergenic | 50.0% | |
| CGGACCGTTTCAAATGAGCT+TGG | + | chr4.4:43339444-43339463 | None:intergenic | 50.0% | |
| CTAGGACGACTTGACAGTTG+AGG | + | chr4.4:43337094-43337113 | None:intergenic | 50.0% | |
| CTATCCCATGGAAGTTCCCA+TGG | - | chr4.4:43335649-43335668 | MS.gene64648:intron | 50.0% | |
| CTGCTGCAGGAGCTATTCAA+GGG | - | chr4.4:43335312-43335331 | MS.gene64648:intron | 50.0% | |
| CTTTCATTCAGCAGATGGGG+AGG | - | chr4.4:43337957-43337976 | MS.gene64648:intron | 50.0% | |
| CTTTGAATCCCGGCAATGCA+GGG | + | chr4.4:43337302-43337321 | None:intergenic | 50.0% | |
| GAAGATTTCCCTGCATTGCC+GGG | - | chr4.4:43337291-43337310 | MS.gene64648:intron | 50.0% | |
| GAAGGCCTTAATCCAATGCC+AGG | + | chr4.4:43338319-43338338 | None:intergenic | 50.0% | |
| GCGCATCCAACAAGCATATG+AGG | + | chr4.4:43334969-43334988 | None:intergenic | 50.0% | |
| GGGAATATTGGAAGGACTGG+TGG | - | chr4.4:43335877-43335896 | MS.gene64648:intron | 50.0% | |
| GGTCTTGGCATTAGTCCCAT+TGG | - | chr4.4:43337237-43337256 | MS.gene64648:intron | 50.0% | |
| GTCTGTTGCATGTTGCAGCA+AGG | - | chr4.4:43338793-43338812 | MS.gene64648:intron | 50.0% | |
| GTGGATGAGGAGAGTCAGTT+AGG | - | chr4.4:43336392-43336411 | MS.gene64648:CDS | 50.0% | |
| GTGGGAAACATGATTGGAGG+GGG | - | chr4.4:43335856-43335875 | MS.gene64648:intron | 50.0% | |
| GTTCTGCTGGAGGATCTCAA+GGG | - | chr4.4:43337113-43337132 | MS.gene64648:intron | 50.0% | |
| GTTGCAGACCTGTGACTGAT+AGG | + | chr4.4:43338140-43338159 | None:intergenic | 50.0% | |
| TATGTGCTTGCTTGCACCAG+CGG | + | chr4.4:43339393-43339412 | None:intergenic | 50.0% | |
| TCAGGAGTCACCAATAGAGG+AGG | - | chr4.4:43335676-43335695 | MS.gene64648:intron | 50.0% | |
| TCTCCCTGTCGCATTATCAC+AGG | - | chr4.4:43335478-43335497 | MS.gene64648:CDS | 50.0% | |
| TGAGATCCTCCAGCAGAACT+AGG | + | chr4.4:43337112-43337131 | None:intergenic | 50.0% | |
| TGGGAAACATGATTGGAGGG+GGG | - | chr4.4:43335857-43335876 | MS.gene64648:intron | 50.0% | |
| TGTTGTTGAACACCCCCAGA+TGG | + | chr4.4:43335419-43335438 | None:intergenic | 50.0% | |
| TTGGAGGGGGGAATATTGGA+AGG | - | chr4.4:43335869-43335888 | MS.gene64648:intron | 50.0% | |
| TTGTTGCGGTTGGGTACGAT+GGG | + | chr4.4:43338017-43338036 | None:intergenic | 50.0% | |
| ! | ACAAGCGTTGTAGGAAACCC+TGG | - | chr4.4:43335700-43335719 | MS.gene64648:intron | 50.0% |
| ! | AGAGGAGGTACAAGCGTTGT+AGG | - | chr4.4:43335691-43335710 | MS.gene64648:intron | 50.0% |
| ! | CTCATTTGAAACGGTCCGCA+AGG | - | chr4.4:43339446-43339465 | MS.gene64648:CDS | 50.0% |
| ! | GACCTCCTGGCATTGGATTA+AGG | - | chr4.4:43338311-43338330 | MS.gene64648:intron | 50.0% |
| ! | TCAGGTGCTTTAGGCATGCA+AGG | - | chr4.4:43335955-43335974 | MS.gene64648:intron | 50.0% |
| !! | AGGTCTGCTGGTTTCAGCTT+GGG | - | chr4.4:43337977-43337996 | MS.gene64648:intron | 50.0% |
| !! | CGTTTTAGGTAGGGGAGAAG+AGG | + | chr4.4:43340065-43340084 | None:intergenic | 50.0% |
| !! | CTCTCGAATCACTAGCTCTG+TGG | - | chr4.4:43335837-43335856 | MS.gene64648:intron | 50.0% |
| !! | GAGTTGGTGGTTCCATTCCT+GGG | - | chr4.4:43335743-43335762 | MS.gene64648:intron | 50.0% |
| !! | GTGAGAGTACCAGGCATGTT+GGG | + | chr4.4:43335368-43335387 | None:intergenic | 50.0% |
| !! | TCAAGTCGTCCTAGTTCTGC+TGG | - | chr4.4:43337100-43337119 | MS.gene64648:intron | 50.0% |
| !! | TGTGAGAGTACCAGGCATGT+TGG | + | chr4.4:43335369-43335388 | None:intergenic | 50.0% |
| CCTGCATTGCCGGGATTCAA+AGG | - | chr4.4:43337300-43337319 | MS.gene64648:intron | 55.0% | |
| CCTGCTGCAGGAGCTATTCA+AGG | - | chr4.4:43335311-43335330 | MS.gene64648:intron | 55.0% | |
| CCTTGAATAGCTCCTGCAGC+AGG | + | chr4.4:43335314-43335333 | None:intergenic | 55.0% | |
| CCTTTGAATCCCGGCAATGC+AGG | + | chr4.4:43337303-43337322 | None:intergenic | 55.0% | |
| GGAAGTTCCCATGGGCATTC+AGG | - | chr4.4:43335658-43335677 | MS.gene64648:intron | 55.0% | |
| GGAGGATCTCAAGGGCAGTT+GGG | - | chr4.4:43337121-43337140 | MS.gene64648:intron | 55.0% | |
| GGATTGTCTGTGCCTGGTCT+TGG | - | chr4.4:43335901-43335920 | MS.gene64648:CDS | 55.0% | |
| GGCCTTAATCCAATGCCAGG+AGG | + | chr4.4:43338316-43338335 | None:intergenic | 55.0% | |
| GGGGGGAATATTGGAAGGAC+TGG | - | chr4.4:43335874-43335893 | MS.gene64648:intron | 55.0% | |
| GGTGACTCCTGAATGCCCAT+GGG | + | chr4.4:43335668-43335687 | None:intergenic | 55.0% | |
| GTTGTTGCGGTTGGGTACGA+TGG | + | chr4.4:43338018-43338037 | None:intergenic | 55.0% | |
| TGGAGGATCTCAAGGGCAGT+TGG | - | chr4.4:43337120-43337139 | MS.gene64648:intron | 55.0% | |
| TGGTGACTCCTGAATGCCCA+TGG | + | chr4.4:43335669-43335688 | None:intergenic | 55.0% | |
| TTAGGTAGGGGAGAAGAGGG+CGG | + | chr4.4:43340061-43340080 | None:intergenic | 55.0% | |
| TTCCAAGAGCAAGGGATGCC+AGG | + | chr4.4:43338558-43338577 | None:intergenic | 55.0% | |
| ! | GTGGGGAGCCAAGCATTTTC+TGG | - | chr4.4:43335243-43335262 | MS.gene64648:intron | 55.0% |
| !! | AGTCGTCCTAGTTCTGCTGG+AGG | - | chr4.4:43337103-43337122 | MS.gene64648:intron | 55.0% |
| !! | GAGGTCTGCTGGTTTCAGCT+TGG | - | chr4.4:43337976-43337995 | MS.gene64648:intron | 55.0% |
| !! | GGAGTTGGTGGTTCCATTCC+TGG | - | chr4.4:43335742-43335761 | MS.gene64648:intron | 55.0% |
| !! | GGGGGTGTTCAACAACAAGC+AGG | - | chr4.4:43335422-43335441 | MS.gene64648:CDS | 55.0% |
| !! | GGTCTGCTGGTTTCAGCTTG+GGG | - | chr4.4:43337978-43337997 | MS.gene64648:intron | 55.0% |
| !! | GTCTGCTGGTTTCAGCTTGG+GGG | - | chr4.4:43337979-43337998 | MS.gene64648:intron | 55.0% |
| !! | TCTGCTGGTTTCAGCTTGGG+GGG | - | chr4.4:43337980-43337999 | MS.gene64648:intron | 55.0% |
| GACCTGGCATCCCTTGCTCT+TGG | - | chr4.4:43338553-43338572 | MS.gene64648:intron | 60.0% | |
| GGTGGAGGATTGTCTGTGCC+TGG | - | chr4.4:43335895-43335914 | MS.gene64648:intron | 60.0% | |
| TGCACCAGCGGCTCCATGTT+GGG | + | chr4.4:43339381-43339400 | None:intergenic | 60.0% | |
| TTGCACCAGCGGCTCCATGT+TGG | + | chr4.4:43339382-43339401 | None:intergenic | 60.0% | |
| ! | GAAAGTGCGCCTCCAGCACT+AGG | + | chr4.4:43336974-43336993 | None:intergenic | 60.0% |
| !! | CTGCTGGTTTCAGCTTGGGG+GGG | - | chr4.4:43337981-43338000 | MS.gene64648:intron | 60.0% |
| ACCAGCGGACCTCCTGGCAT+TGG | - | chr4.4:43338304-43338323 | MS.gene64648:intron | 65.0% | |
| AGCACCCAACATGGAGCCGC+TGG | - | chr4.4:43339374-43339393 | MS.gene64648:intron | 65.0% | |
| CAGCAGATGGGGAGGTCTGC+TGG | - | chr4.4:43337965-43337984 | MS.gene64648:intron | 65.0% | |
| CCGTGCGTGCGCAAGTGTAG+CGG | - | chr4.4:43340331-43340350 | MS.gene64648:CDS | 65.0% | |
| GTGTAGACCAGCGGACCTCC+TGG | - | chr4.4:43338298-43338317 | MS.gene64648:intron | 65.0% | |
| TCCAATGCCAGGAGGTCCGC+TGG | + | chr4.4:43338308-43338327 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 43334533 | 43340350 | 43334533 | ID=MS.gene64648 |
| chr4.4 | mRNA | 43334533 | 43340350 | 43334533 | ID=MS.gene64648.t1;Parent=MS.gene64648 |
| chr4.4 | exon | 43340279 | 43340350 | 43340279 | ID=MS.gene64648.t1.exon1;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43340279 | 43340350 | 43340279 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43339641 | 43339749 | 43339641 | ID=MS.gene64648.t1.exon2;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43339641 | 43339749 | 43339641 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43339384 | 43339562 | 43339384 | ID=MS.gene64648.t1.exon3;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43339384 | 43339562 | 43339384 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43338871 | 43339234 | 43338871 | ID=MS.gene64648.t1.exon4;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43338871 | 43339234 | 43338871 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43337741 | 43337950 | 43337741 | ID=MS.gene64648.t1.exon5;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43337741 | 43337950 | 43337741 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43337562 | 43337663 | 43337562 | ID=MS.gene64648.t1.exon6;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43337562 | 43337663 | 43337562 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43337025 | 43337113 | 43337025 | ID=MS.gene64648.t1.exon7;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43337025 | 43337113 | 43337025 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43336733 | 43336915 | 43336733 | ID=MS.gene64648.t1.exon8;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43336733 | 43336915 | 43336733 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43336157 | 43336579 | 43336157 | ID=MS.gene64648.t1.exon9;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43336157 | 43336579 | 43336157 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43336020 | 43336072 | 43336020 | ID=MS.gene64648.t1.exon10;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43336020 | 43336072 | 43336020 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43335899 | 43335940 | 43335899 | ID=MS.gene64648.t1.exon11;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43335899 | 43335940 | 43335899 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43335416 | 43335560 | 43335416 | ID=MS.gene64648.t1.exon12;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43335416 | 43335560 | 43335416 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| chr4.4 | exon | 43334533 | 43334589 | 43334533 | ID=MS.gene64648.t1.exon13;Parent=MS.gene64648.t1 |
| chr4.4 | CDS | 43334533 | 43334589 | 43334533 | ID=cds.MS.gene64648.t1;Parent=MS.gene64648.t1 |
| Gene Sequence |
| Protein sequence |
