AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64745

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64745.t1 MTR_3g048950 95.345 537 22 1 1 534 1 537 0.0 1015
MS.gene64745.t1 MTR_2g010180 33.937 442 253 10 87 519 179 590 1.09e-48 178
MS.gene64745.t1 MTR_2g010180 33.864 440 252 10 87 517 193 602 1.16e-48 178
MS.gene64745.t1 MTR_2g010180 33.864 440 252 10 87 517 179 588 1.53e-48 177
MS.gene64745.t1 MTR_3g096980 30.603 464 266 12 75 523 174 596 5.60e-46 170
MS.gene64745.t1 MTR_8g094740 30.769 455 260 12 84 523 183 597 1.28e-41 158
MS.gene64745.t1 MTR_8g080890 32.982 285 182 5 43 321 45 326 6.81e-35 137
MS.gene64745.t1 MTR_8g094740 30.769 390 229 9 84 469 183 535 9.32e-34 135
MS.gene64745.t1 MTR_8g080870 26.459 514 283 16 43 517 15 472 2.24e-33 133
MS.gene64745.t1 MTR_4g074030 26.306 536 298 16 34 528 29 508 9.23e-33 131
MS.gene64745.t1 MTR_8g080840 28.686 373 231 7 5 361 22 375 1.90e-32 130
MS.gene64745.t1 MTR_8g097220 29.904 311 203 6 17 321 21 322 1.42e-31 128
MS.gene64745.t1 MTR_8g080880 32.168 286 183 5 43 321 44 325 5.43e-31 126
MS.gene64745.t1 MTR_8g095600 31.429 245 152 4 40 279 163 396 2.57e-29 121
MS.gene64745.t1 MTR_8g095600 31.429 245 152 4 40 279 163 396 6.46e-29 121
MS.gene64745.t1 MTR_8g095600 31.429 245 152 4 40 279 179 412 9.09e-29 120
MS.gene64745.t1 MTR_8g095600 31.429 245 152 4 40 279 163 396 9.58e-29 120
MS.gene64745.t1 MTR_1g082750 46.429 112 60 0 138 249 63 174 1.24e-22 100
MS.gene64745.t1 MTR_4g094205 46.602 103 55 0 148 250 119 221 9.16e-20 93.2
MS.gene64745.t1 MTR_8g107280 39.640 111 67 0 140 250 101 211 2.38e-11 66.6
MS.gene64745.t1 MTR_8g107280 39.640 111 67 0 140 250 101 211 2.65e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64745.t1 AT3G25660 73.184 537 134 4 3 531 1 535 0.0 763
MS.gene64745.t1 AT5G64440 30.000 450 266 11 82 517 175 589 2.38e-46 171
MS.gene64745.t1 AT5G07360 30.451 266 170 4 15 275 181 436 3.28e-28 119
MS.gene64745.t1 AT5G07360 30.451 266 170 4 15 275 181 436 3.28e-28 119
MS.gene64745.t1 AT4G34880 27.711 498 298 15 40 517 45 500 3.50e-28 118
MS.gene64745.t1 AT5G07360 30.451 266 163 5 15 275 181 429 1.14e-26 114
MS.gene64745.t1 AT1G08980 45.299 117 64 0 138 254 64 180 4.97e-22 99.0
MS.gene64745.t1 AT5G09420 34.682 173 107 3 138 310 107 273 7.57e-19 90.5
MS.gene64745.t1 AT4G34880 23.780 492 279 15 40 517 45 454 2.50e-18 88.2
MS.gene64745.t1 AT3G17970 41.818 110 64 0 141 250 97 206 1.51e-16 83.2
MS.gene64745.t1 AT3G17970 42.857 105 60 0 146 250 102 206 1.72e-16 83.2

Find 188 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATAAGGAATAGCTTTA+AGG 0.196302 5.2:+12868741 MS.gene64745:CDS
CCTTCAGCTGCTTATAAAAT+TGG 0.204129 5.2:+12868805 MS.gene64745:CDS
CACTGAAGCTTCTGCTTATC+AGG 0.236597 5.2:+12865448 MS.gene64745:CDS
CTTGATGCCATTGGCTGCTT+TGG 0.241283 5.2:+12867241 MS.gene64745:CDS
GGAGGTGCGGTGGCAGGTGG+GGG 0.254055 5.2:-12865041 None:intergenic
GGTTCATCGGTTGCTGATGC+TGG 0.274044 5.2:+12867262 MS.gene64745:CDS
CTTAAAGCTATTCCTTATAA+TGG 0.283232 5.2:-12868740 None:intergenic
GAGGGAGGTGCGGTGGCAGG+TGG 0.318193 5.2:-12865044 None:intergenic
CCCTTGAAAGGTCTGAGAAT+TGG 0.320152 5.2:+12867603 MS.gene64745:CDS
TGTTGTTGGGAAGACGAATA+TGG 0.330954 5.2:+12865403 MS.gene64745:CDS
CCTGTTGGCCTGCAAATGAT+TGG 0.334314 5.2:+12869756 MS.gene64745:CDS
GGGAGGTGCGGTGGCAGGTG+GGG 0.334557 5.2:-12865042 None:intergenic
TATGGACGTGTCTCAAGATT+TGG 0.338893 5.2:+12867196 MS.gene64745:CDS
TGTCTCGCTATGATGGTATT+AGG 0.343270 5.2:+12867932 MS.gene64745:CDS
TGGTGTTCTTGTTGCTGTTA+AGG 0.344765 5.2:+12865268 MS.gene64745:CDS
CCAACCCGTGGGATGTTTCC+AGG 0.350063 5.2:+12867038 MS.gene64745:CDS
GAGGAAATTGGTCCTCTTGC+TGG 0.355923 5.2:+12865248 MS.gene64745:CDS
CCATGTGGATTTATTGAGAA+TGG 0.359058 5.2:+12869720 MS.gene64745:CDS
TGTCTCAAGATTTGGACTTA+TGG 0.369848 5.2:+12867204 MS.gene64745:CDS
ATCTCTGCCGGCGAGGAAAT+TGG 0.370965 5.2:+12865236 MS.gene64745:CDS
CGGCAGAGATTCTGCGGTCT+AGG 0.376444 5.2:-12865223 None:intergenic
GATTCCCGAGCCAAAGGGTT+AGG 0.376718 5.2:+12868142 MS.gene64745:CDS
AGGGAGGTGCGGTGGCAGGT+GGG 0.381564 5.2:-12865043 None:intergenic
AAAGAGTGGAACGTGGAGTT+TGG 0.381955 5.2:-12864974 None:intergenic
ACCAATTCTCAGACCTTTCA+AGG 0.382570 5.2:-12867604 None:intergenic
CGGAGAGGGAGTTGGTGAGA+AGG 0.384523 5.2:-12865091 None:intergenic
CGAGGATACTTGAGGGTTAT+CGG 0.386311 5.2:+12865330 MS.gene64745:CDS
GGTGGAGGAAGGAACGGAGG+TGG 0.388259 5.2:-12865163 None:intergenic
ATGCTGCACCAATCATTTGC+AGG 0.388800 5.2:-12869764 None:intergenic
AGTGGTCAGAAGGGAGGTGG+AGG 0.391600 5.2:-12865178 None:intergenic
AAGACGAATATGGATGAGTT+TGG 0.396095 5.2:+12865413 MS.gene64745:CDS
CGGTGAGACGGAGGCGGGTG+AGG 0.400218 5.2:-12865136 None:intergenic
CATTGGCTGCTTTGGTTCAT+CGG 0.403088 5.2:+12867249 MS.gene64745:CDS
GAGTTGGGTGGGATTGTTGT+TGG 0.403136 5.2:+12865389 MS.gene64745:CDS
AACAGGTGAGAACCATTATA+AGG 0.404504 5.2:+12868728 MS.gene64745:intron
ATACTTCTCCATGCAATTGC+TGG 0.405414 5.2:+12867286 MS.gene64745:CDS
GGAGAGGGAGTTGGTGAGAA+GGG 0.408597 5.2:-12865090 None:intergenic
GGAGGCGGGTGAGGTGGGAT+TGG 0.414605 5.2:-12865127 None:intergenic
GAAGGAACGGAGGTGGGGTT+CGG 0.415482 5.2:-12865156 None:intergenic
TGAGAGGGAGGTGCGGTGGC+AGG 0.415744 5.2:-12865047 None:intergenic
GGGGTTCGGTGAGACGGAGG+CGG 0.420001 5.2:-12865142 None:intergenic
AACTGCAGCTGCCGATCCTC+CGG 0.421581 5.2:-12867077 None:intergenic
AGTTGGGTGGGATTGTTGTT+GGG 0.424283 5.2:+12865390 MS.gene64745:CDS
CCAATCATTTGCAGGCCAAC+AGG 0.424765 5.2:-12869756 None:intergenic
CACCATCTTCAATAGTTTCA+CGG 0.431389 5.2:-12867632 None:intergenic
GTGGAGGAAGGAACGGAGGT+GGG 0.435354 5.2:-12865162 None:intergenic
GGGAGTGGTCAGAAGGGAGG+TGG 0.436737 5.2:-12865181 None:intergenic
GAGGTGCGGTGGCAGGTGGG+GGG 0.437698 5.2:-12865040 None:intergenic
TGGGATGTTTCCAGGGTGCC+AGG 0.440289 5.2:+12867046 MS.gene64745:CDS
GATCCTCCGGATGATCCTCC+TGG 0.440465 5.2:-12867064 None:intergenic
TACAGATTTGTTCCACCAAT+CGG 0.443443 5.2:+12870719 MS.gene64745:CDS
CTAGCTCATCAGCATAAACT+TGG 0.445051 5.2:-12868105 None:intergenic
GGAGGTGGAGGAAGGAACGG+AGG 0.445202 5.2:-12865166 None:intergenic
GTAGGTTTGAAGCCAACATA+TGG 0.451615 5.2:+12867178 MS.gene64745:CDS
GGGGTGTGTAAGAGTAGCTT+GGG 0.452977 5.2:-12865021 None:intergenic
GATGAGCTAGACTCTCTCTA+TGG 0.453282 5.2:+12868118 MS.gene64745:CDS
TTAAAATGAGATAGAAAGTT+GGG 0.454413 5.2:-12867555 None:intergenic
GAGCTGATAGCGTTGAATAA+CGG 0.457511 5.2:+12870741 MS.gene64745:CDS
TGAGACGGAGGCGGGTGAGG+TGG 0.460578 5.2:-12865133 None:intergenic
GGGACATATGCCCTTTCAGC+TGG 0.466577 5.2:+12868340 MS.gene64745:CDS
CAGGTAAATGTCAACCTAGC+TGG 0.469971 5.2:+12869678 MS.gene64745:intron
TACCTCAGAACCTAACCCTT+TGG 0.473794 5.2:-12868152 None:intergenic
GTATCGTTGGGAAGTGATAC+TGG 0.476953 5.2:+12867118 MS.gene64745:CDS
TCCAACTTGTCTCGCTATGA+TGG 0.480589 5.2:+12867925 MS.gene64745:CDS
GATGAGGTCGGTGGCGGAGA+GGG 0.480626 5.2:-12865105 None:intergenic
GTGAAGAGAGTTAAGGAGTT+GGG 0.481622 5.2:+12865374 MS.gene64745:CDS
CGGCAGCTGCAGTTTCTGCC+AGG 0.482175 5.2:+12867086 MS.gene64745:CDS
TTCACCGCCGTCGCATCAAA+AGG 0.483739 5.2:-12865356 None:intergenic
GGGTTCGGTGAGACGGAGGC+GGG 0.484229 5.2:-12865141 None:intergenic
GAGTAGCTTGGGTGGATGAT+GGG 0.484757 5.2:-12865010 None:intergenic
GAGACGGAGGCGGGTGAGGT+GGG 0.484958 5.2:-12865132 None:intergenic
GTGTGTAAGAGTAGCTTGGG+TGG 0.486398 5.2:-12865018 None:intergenic
GTTAAAATGAGATAGAAAGT+TGG 0.486758 5.2:-12867556 None:intergenic
CAACGATACAACACACTGCC+TGG 0.490331 5.2:-12867104 None:intergenic
GTCGGTGGCGGAGAGGGAGT+TGG 0.490976 5.2:-12865099 None:intergenic
AGGGTGCCAGGAGGATCATC+CGG 0.492708 5.2:+12867058 MS.gene64745:CDS
GAATAGCTTTAAGGAAGCAC+TGG 0.494423 5.2:+12868750 MS.gene64745:CDS
GAATATGGATGAGTTTGGTA+TGG 0.494732 5.2:+12865418 MS.gene64745:CDS
ATTGAAGATGGTGTTGATGC+TGG 0.494844 5.2:+12867642 MS.gene64745:CDS
AGTTGGTGAGAAGGGAGTGA+CGG 0.496681 5.2:-12865082 None:intergenic
GGGTGAGGTGGGATTGGATG+AGG 0.497563 5.2:-12865121 None:intergenic
AGAGTAGCTTGGGTGGATGA+TGG 0.500080 5.2:-12865011 None:intergenic
AAGGGAGGTGGAGGAAGGAA+CGG 0.501951 5.2:-12865169 None:intergenic
TAAGCAGCTGAAGGAGCTGC+AGG 0.503173 5.2:-12868796 None:intergenic
GGATTGGATGAGGTCGGTGG+CGG 0.503997 5.2:-12865111 None:intergenic
TGCTGGCAACCCAAGCGAAA+AGG 0.504879 5.2:-12867872 None:intergenic
GGAGGTGGGGTTCGGTGAGA+CGG 0.506358 5.2:-12865148 None:intergenic
GTGATACTGGTGGAAGTATG+AGG 0.508405 5.2:+12867131 MS.gene64745:CDS
AGAACCTAACCCTTTGGCTC+GGG 0.508452 5.2:-12868146 None:intergenic
GGTGGGGTTCGGTGAGACGG+AGG 0.508984 5.2:-12865145 None:intergenic
CCTAGCTGGACTACCTGCCT+TGG 0.511239 5.2:+12869692 MS.gene64745:CDS
CGATGAGGGAGTGGTCAGAA+GGG 0.512463 5.2:-12865187 None:intergenic
ACGCTATCAGCTCCGATTGG+TGG 0.515905 5.2:-12870731 None:intergenic
ATCATAGTAACCAGCTGAAA+GGG 0.518202 5.2:-12868350 None:intergenic
TAGCTTGGGTGGATGATGGG+AGG 0.520873 5.2:-12865007 None:intergenic
TGGTGAGAAGGGAGTGACGG+AGG 0.521192 5.2:-12865079 None:intergenic
GTTCATCGGTTGCTGATGCT+GGG 0.522970 5.2:+12867263 MS.gene64745:CDS
TGTTAAGGATAATATTTGTA+CGG 0.523699 5.2:+12865283 MS.gene64745:CDS
TGGAGGAAGGAACGGAGGTG+GGG 0.527467 5.2:-12865161 None:intergenic
ACGGAGGGTGAGAATTTGAG+AGG 0.528139 5.2:-12865063 None:intergenic
ACGGCTGACATGCCGTCCAC+TGG 0.529078 5.2:+12865302 MS.gene64745:CDS
AGGAGGATCATCCGGAGGAT+CGG 0.529125 5.2:+12867066 MS.gene64745:CDS
TTGGAAAGTAAGCCCTTGAA+AGG 0.529759 5.2:+12867591 MS.gene64745:CDS
CAGGCAGTGTGTTGTATCGT+TGG 0.530074 5.2:+12867105 MS.gene64745:CDS
TTTATTGAGAATGGACCGAC+AGG 0.531528 5.2:+12869729 MS.gene64745:CDS
GTCAGAAGGGAGGTGGAGGA+AGG 0.531740 5.2:-12865174 None:intergenic
GCGATGAGGGAGTGGTCAGA+AGG 0.535504 5.2:-12865188 None:intergenic
ACCATCATAGCGAGACAAGT+TGG 0.538119 5.2:-12867926 None:intergenic
CATCATAGTAACCAGCTGAA+AGG 0.540452 5.2:-12868351 None:intergenic
ATGGAGATTCCCGAGCCAAA+GGG 0.540501 5.2:+12868137 MS.gene64745:CDS
CCAATTCTCAGACCTTTCAA+GGG 0.542138 5.2:-12867603 None:intergenic
GGTGAGAAGGGAGTGACGGA+GGG 0.542284 5.2:-12865078 None:intergenic
TATCATGACCAGCAATTGCA+TGG 0.543365 5.2:-12867294 None:intergenic
CTTGAGACACGTCCATATGT+TGG 0.543787 5.2:-12867190 None:intergenic
AAGAGAGTTAAGGAGTTGGG+TGG 0.544145 5.2:+12865377 MS.gene64745:CDS
GTCATGTGCTTGAGCGATGA+GGG 0.545346 5.2:-12865201 None:intergenic
CAGAACCTAACCCTTTGGCT+CGG 0.546221 5.2:-12868147 None:intergenic
GATCCTTTGGCTATGTATGC+TGG 0.549623 5.2:+12868926 MS.gene64745:CDS
AATATGGATGAGTTTGGTAT+GGG 0.549939 5.2:+12865419 MS.gene64745:CDS
GCTGACATGCCGTCCACTGG+TGG 0.550639 5.2:+12865305 MS.gene64745:CDS
AGAGAGTTAAGGAGTTGGGT+GGG 0.551590 5.2:+12865378 MS.gene64745:CDS
ATCCGTGAAACTATTGAAGA+TGG 0.552239 5.2:+12867630 MS.gene64745:CDS
AGCTTGGGTGGATGATGGGA+GGG 0.554935 5.2:-12865006 None:intergenic
CCACATGGTAAAACCAAGGC+AGG 0.555507 5.2:-12869705 None:intergenic
AACTCATACTTGCTTACTTG+AGG 0.556320 5.2:-12867329 None:intergenic
GGTGGATCGAGGATACTTGA+GGG 0.557902 5.2:+12865323 MS.gene64745:CDS
GAGAATTTGAGAGGGAGGTG+CGG 0.558307 5.2:-12865054 None:intergenic
TATGGAGATTCCCGAGCCAA+AGG 0.558471 5.2:+12868136 MS.gene64745:CDS
GCAGGGAGAGCTGCTGAGAG+TGG 0.563133 5.2:+12870667 MS.gene64745:intron
GATTGGTGCAGCATTTAATG+AGG 0.564316 5.2:+12869773 MS.gene64745:CDS
ATATTACAAACGAGCACAGC+AGG 0.567788 5.2:+12868375 MS.gene64745:CDS
CCAAGGCAGGTAGTCCAGCT+AGG 0.568026 5.2:-12869692 None:intergenic
AGGCAGTGTGTTGTATCGTT+GGG 0.568441 5.2:+12867106 MS.gene64745:CDS
CGGAGGGTGAGAATTTGAGA+GGG 0.568560 5.2:-12865062 None:intergenic
TGGTGGAAGTATGAGGCAGC+CGG 0.571787 5.2:+12867138 MS.gene64745:CDS
AGCCAAAGGGTTAGGTTCTG+AGG 0.574572 5.2:+12868150 MS.gene64745:CDS
CAGGGAGAGCTGCTGAGAGT+GGG 0.575596 5.2:+12870668 MS.gene64745:intron
CAACCCGTGGGATGTTTCCA+GGG 0.577526 5.2:+12867039 MS.gene64745:CDS
GTGCTTGAGCGATGAGGGAG+TGG 0.579624 5.2:-12865196 None:intergenic
GACGGCGGTGAAGAGAGTTA+AGG 0.579689 5.2:+12865367 MS.gene64745:CDS
GGACCGACAGGGCTTCCTGT+TGG 0.581994 5.2:+12869741 MS.gene64745:CDS
AGCAGCTGAAGGAGCTGCAG+GGG 0.585773 5.2:-12868794 None:intergenic
GGATGATCCTCCTGGCACCC+TGG 0.587626 5.2:-12867056 None:intergenic
GAGGTGGGATTGGATGAGGT+CGG 0.587835 5.2:-12865117 None:intergenic
CTGATAAGCAGAAGCTTCAG+TGG 0.588296 5.2:-12865447 None:intergenic
AAGAGGACCAATTTCCTCGC+CGG 0.588428 5.2:-12865243 None:intergenic
GGTGAAGAGAGTTAAGGAGT+TGG 0.591063 5.2:+12865373 MS.gene64745:CDS
TCAACGCTATCAGCTCCGAT+TGG 0.591245 5.2:-12870734 None:intergenic
CGATGAACCAAAGCAGCCAA+TGG 0.591677 5.2:-12867248 None:intergenic
GGCACCCTGGAAACATCCCA+CGG 0.592300 5.2:-12867043 None:intergenic
GAGGGAGAAGCGTGAAAGAG+TGG 0.593307 5.2:-12864988 None:intergenic
TCATACTTGCTTACTTGAGG+TGG 0.595066 5.2:-12867326 None:intergenic
GCGTCATCACTTGATGCCAT+TGG 0.595721 5.2:+12867232 MS.gene64745:CDS
GTGGGATTGGATGAGGTCGG+TGG 0.596179 5.2:-12865114 None:intergenic
TGAGGGAGTGGTCAGAAGGG+AGG 0.603180 5.2:-12865184 None:intergenic
GGCAACCCAAGCGAAAAGGA+CGG 0.606693 5.2:-12867868 None:intergenic
GGAACGTGGAGTTTGGAGTG+TGG 0.608311 5.2:-12864967 None:intergenic
CCTCGCCGGCAGAGATTCTG+CGG 0.609604 5.2:-12865229 None:intergenic
GGATGAGGTCGGTGGCGGAG+AGG 0.610120 5.2:-12865106 None:intergenic
TGGTGGATCGAGGATACTTG+AGG 0.610399 5.2:+12865322 MS.gene64745:CDS
GCAACAAGAACACCAGCAAG+AGG 0.610406 5.2:-12865260 None:intergenic
AAAGCGAGGACATAGTATGC+TGG 0.610724 5.2:-12867889 None:intergenic
AGGCCAACAGGAAGCCCTGT+CGG 0.612914 5.2:-12869744 None:intergenic
GCACCCTGGAAACATCCCAC+GGG 0.614008 5.2:-12867042 None:intergenic
AAGCAGCTGAAGGAGCTGCA+GGG 0.619430 5.2:-12868795 None:intergenic
TGCCGTCCACTGGTGGATCG+AGG 0.620221 5.2:+12865312 MS.gene64745:CDS
CTAGACCGCAGAATCTCTGC+CGG 0.621592 5.2:+12865224 MS.gene64745:CDS
CCTGGAAACATCCCACGGGT+TGG 0.622339 5.2:-12867038 None:intergenic
ATCCTCGATCCACCAGTGGA+CGG 0.622376 5.2:-12865314 None:intergenic
GGTCATGTGCTTGAGCGATG+AGG 0.632305 5.2:-12865202 None:intergenic
ATATGGATGAGTTTGGTATG+GGG 0.639425 5.2:+12865420 MS.gene64745:CDS
AATTTGAGAGGGAGGTGCGG+TGG 0.644753 5.2:-12865051 None:intergenic
ACCGCCGTCGCATCAAAAGG+AGG 0.647265 5.2:-12865353 None:intergenic
ATTAGGATGCTCTGTGAACG+AGG 0.648039 5.2:+12867707 MS.gene64745:CDS
AGGGTGAGAATTTGAGAGGG+AGG 0.648068 5.2:-12865059 None:intergenic
CCATTCTCAATAAATCCACA+TGG 0.649598 5.2:-12869720 None:intergenic
TCACCAGCATACATAGCCAA+AGG 0.651194 5.2:-12868929 None:intergenic
CCGCAGAATCTCTGCCGGCG+AGG 0.660790 5.2:+12865229 MS.gene64745:CDS
AAGTATCCTCGATCCACCAG+TGG 0.660887 5.2:-12865318 None:intergenic
TTATTGAGAATGGACCGACA+GGG 0.664505 5.2:+12869730 MS.gene64745:CDS
AAGATGATTCAGACAAAGCG+AGG 0.664996 5.2:-12867903 None:intergenic
AATAGGTGACTACCAACCCG+TGG 0.669659 5.2:+12867026 MS.gene64745:intron
AAGCGTGAAAGAGTGGAACG+TGG 0.670786 5.2:-12864981 None:intergenic
GATGTTTCCAGGGTGCCAGG+AGG 0.670862 5.2:+12867049 MS.gene64745:CDS
AAATCCACATGGTAAAACCA+AGG 0.672604 5.2:-12869709 None:intergenic
ATAGGTGACTACCAACCCGT+GGG 0.676816 5.2:+12867027 MS.gene64745:intron
GTGCCAGGAGGATCATCCGG+AGG 0.694596 5.2:+12867061 MS.gene64745:CDS
TCGTTGGGAAGTGATACTGG+TGG 0.795744 5.2:+12867121 MS.gene64745:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAACAACATAAATAT+AGG + chr5.2:12869418-12869437 MS.gene64745:intron 10.0%
!!! TGATTAATTAAGATATTTTT+TGG - chr5.2:12869201-12869220 None:intergenic 10.0%
!!! TTCTATTTTTATTTTTTTCA+AGG - chr5.2:12870620-12870639 None:intergenic 10.0%
!! AAACTTATTTCAGTTATAAA+TGG - chr5.2:12866980-12866999 None:intergenic 15.0%
!! AAATACAATACATACAAAAT+TGG - chr5.2:12868266-12868285 None:intergenic 15.0%
!! AACTTATTTCAGTTATAAAT+GGG - chr5.2:12866979-12866998 None:intergenic 15.0%
!! AATTGATTATCTATTATCTA+AGG - chr5.2:12869171-12869190 None:intergenic 15.0%
!! ATAATAGTATATTGGATTTA+TGG - chr5.2:12866305-12866324 None:intergenic 15.0%
!! ATAGTAAATGGTTAAATAAA+GGG + chr5.2:12865811-12865830 MS.gene64745:intron 15.0%
!! CATATATGTATTTATTGTAT+AGG - chr5.2:12869498-12869517 None:intergenic 15.0%
!! TACTAACTTAGAAATATAAA+AGG + chr5.2:12866272-12866291 MS.gene64745:intron 15.0%
!! TATCCAAAAACTAAAAAATA+AGG - chr5.2:12866097-12866116 None:intergenic 15.0%
!!! AACAATTTTTAAACTTTCTT+TGG - chr5.2:12870003-12870022 None:intergenic 15.0%
!!! ACTTTATTTTATGTATTTCT+TGG + chr5.2:12868406-12868425 MS.gene64745:intron 15.0%
!!! ATTTTAACCTAAAATAATGT+GGG + chr5.2:12870515-12870534 MS.gene64745:intron 15.0%
!!! CATTAATAAATCATTTTGTT+TGG + chr5.2:12868047-12868066 MS.gene64745:intron 15.0%
!!! TATTTTAACCTAAAATAATG+TGG + chr5.2:12870514-12870533 MS.gene64745:intron 15.0%
!!! TTATTTTTTTCAAGGAAAAA+AGG - chr5.2:12870612-12870631 None:intergenic 15.0%
!!! TTCATTTATTTTAGAAGTTT+GGG + chr5.2:12868674-12868693 MS.gene64745:intron 15.0%
!!! TTGAAAGTTTTAATACATTT+AGG + chr5.2:12865840-12865859 MS.gene64745:intron 15.0%
!!! TTTCATTTATTTTAGAAGTT+TGG + chr5.2:12868673-12868692 MS.gene64745:intron 15.0%
!! AAATGAAAAGGGTTAAATAA+CGG - chr5.2:12867823-12867842 None:intergenic 20.0%
!! AAGTATTTCATTCTTCTTAT+CGG + chr5.2:12868964-12868983 MS.gene64745:intron 20.0%
!! ACAGAATAAAATATTGTGTT+CGG - chr5.2:12868015-12868034 None:intergenic 20.0%
!! CAAAGGAAAAAAAAATGAAA+TGG - chr5.2:12865935-12865954 None:intergenic 20.0%
!! GATAGTAAATGGTTAAATAA+AGG + chr5.2:12865810-12865829 MS.gene64745:intron 20.0%
!! GATGTATTCAATGTTAATAA+TGG + chr5.2:12866133-12866152 MS.gene64745:intron 20.0%
!! GATGTTAGATAATAGTATAT+TGG - chr5.2:12866313-12866332 None:intergenic 20.0%
!! TAAATTCTCGTTATTAGTAA+TGG + chr5.2:12867387-12867406 MS.gene64745:intron 20.0%
!! TAACATCTAGTATTCAATAT+GGG + chr5.2:12866326-12866345 MS.gene64745:intron 20.0%
!! TAATGGAGATATCAAAATAA+GGG + chr5.2:12866150-12866169 MS.gene64745:intron 20.0%
!! TACTAATATTACAAACAACA+GGG - chr5.2:12866504-12866523 None:intergenic 20.0%
!! TATTAGTAATGAATATGAGA+AGG + chr5.2:12866516-12866535 MS.gene64745:intron 20.0%
!! TGTTAAGGATAATATTTGTA+CGG + chr5.2:12865283-12865302 MS.gene64745:CDS 20.0%
!! TGTTGAATTATAGAAAATAG+AGG + chr5.2:12869344-12869363 MS.gene64745:intron 20.0%
!! TTAAAATGAGATAGAAAGTT+GGG - chr5.2:12867558-12867577 None:intergenic 20.0%
!! TTAATTAATCAATAAGTGCA+GGG + chr5.2:12869210-12869229 MS.gene64745:intron 20.0%
!! TTACTAATATTACAAACAAC+AGG - chr5.2:12866505-12866524 None:intergenic 20.0%
!! TTTAGAAATCTTACAACATT+TGG - chr5.2:12867371-12867390 None:intergenic 20.0%
!!! AAAAATAGAATCATCCTTTT+TGG + chr5.2:12870630-12870649 MS.gene64745:intron 20.0%
!!! AATCAATAATGTAATTTGTC+AGG + chr5.2:12867527-12867546 MS.gene64745:intron 20.0%
!!! ATAATGGAGATATCAAAATA+AGG + chr5.2:12866149-12866168 MS.gene64745:intron 20.0%
!!! GCATTTTTTATTAGTCATTT+TGG + chr5.2:12865611-12865630 MS.gene64745:intron 20.0%
!!! TAATGTTTGCCTTTATTTAT+TGG + chr5.2:12869640-12869659 MS.gene64745:intron 20.0%
!!! TATTTTATGTATTTCTTGGT+GGG + chr5.2:12868410-12868429 MS.gene64745:intron 20.0%
!!! TCTCTTTTTTAATACATTTC+AGG + chr5.2:12868297-12868316 MS.gene64745:intron 20.0%
!!! TGACCTTATTTTTTAGTTTT+TGG + chr5.2:12866091-12866110 MS.gene64745:intron 20.0%
!!! TGTTTGTTGTTTTTTATATC+CGG + chr5.2:12865971-12865990 MS.gene64745:intron 20.0%
!!! TTATTTTATGTATTTCTTGG+TGG + chr5.2:12868409-12868428 MS.gene64745:intron 20.0%
!!! TTTACATTTTGCTTTAGATT+GGG + chr5.2:12870271-12870290 MS.gene64745:intron 20.0%
! AAAGAAACAATTACTATTGC+AGG - chr5.2:12868875-12868894 None:intergenic 25.0%
! AAAGTGAAAAAGAAAACTCT+AGG + chr5.2:12870234-12870253 MS.gene64745:intron 25.0%
! AAATAAATTCCAAGCCAAAA+AGG - chr5.2:12870647-12870666 None:intergenic 25.0%
! AATAATATATACTCGACACA+TGG - chr5.2:12869260-12869279 None:intergenic 25.0%
! AGACAATTAGTGTTAAATTG+AGG + chr5.2:12869036-12869055 MS.gene64745:intron 25.0%
! AGTCAAATTTATATAGGCTA+AGG + chr5.2:12869393-12869412 MS.gene64745:intron 25.0%
! ATAGTCTTTGTTCAATATGA+TGG + chr5.2:12867428-12867447 MS.gene64745:intron 25.0%
! ATCCTTCTCAATTTCAAATT+TGG + chr5.2:12868186-12868205 MS.gene64745:intron 25.0%
! CAATAATGTTCATATCACAA+TGG + chr5.2:12866195-12866214 MS.gene64745:intron 25.0%
! CTAACATCTAGTATTCAATA+TGG + chr5.2:12866325-12866344 MS.gene64745:intron 25.0%
! CTTAAAGCTATTCCTTATAA+TGG - chr5.2:12868743-12868762 None:intergenic 25.0%
! CTTAATTAATCAATAAGTGC+AGG + chr5.2:12869209-12869228 MS.gene64745:intron 25.0%
! GTATATTGGATTTATGGTAT+CGG - chr5.2:12866299-12866318 None:intergenic 25.0%
! GTTAAAATGAGATAGAAAGT+TGG - chr5.2:12867559-12867578 None:intergenic 25.0%
! GTTCATTGTTGAAAAGAAAT+TGG - chr5.2:12867507-12867526 None:intergenic 25.0%
! TAATCTCTCTCTAAATCTAA+TGG - chr5.2:12866767-12866786 None:intergenic 25.0%
! TACAGGTATATGCATATATA+AGG - chr5.2:12868230-12868249 None:intergenic 25.0%
! TATATTGGATTTATGGTATC+GGG - chr5.2:12866298-12866317 None:intergenic 25.0%
! TCATTTGTCCATTAACTTAA+AGG + chr5.2:12867837-12867856 MS.gene64745:intron 25.0%
! TGAAAAGAAAAATGATCCTT+TGG + chr5.2:12868913-12868932 MS.gene64745:CDS 25.0%
! TTGCAATTTCAATACATTCA+TGG - chr5.2:12865577-12865596 None:intergenic 25.0%
!! AAGTTAATGGACAAATGAAA+AGG - chr5.2:12867835-12867854 None:intergenic 25.0%
!! ACGTCTATTTTACATGATAA+GGG - chr5.2:12870090-12870109 None:intergenic 25.0%
!! AGTTAATGGACAAATGAAAA+GGG - chr5.2:12867834-12867853 None:intergenic 25.0%
!! ATAGAACAAAAAAGTACACT+TGG - chr5.2:12870342-12870361 None:intergenic 25.0%
!! CATTATAAGGAATAGCTTTA+AGG + chr5.2:12868741-12868760 MS.gene64745:CDS 25.0%
!! CTGTAGTTTTTCTATAAACA+TGG - chr5.2:12870376-12870395 None:intergenic 25.0%
!! TTGGATCATTTCTTTTATAC+AGG - chr5.2:12868247-12868266 None:intergenic 25.0%
!!! ATAAATCATTTTGTTTGGCT+TGG + chr5.2:12868052-12868071 MS.gene64745:intron 25.0%
!!! CTTTACATTTTGCTTTAGAT+TGG + chr5.2:12870270-12870289 MS.gene64745:intron 25.0%
!!! GTGAAAATGAGAATTTTGAT+GGG + chr5.2:12868319-12868338 MS.gene64745:CDS 25.0%
!!! TGAAAATGAGAATTTTGATG+GGG + chr5.2:12868320-12868339 MS.gene64745:CDS 25.0%
!!! TGTTTGTTTTGTTGATTTTG+AGG + chr5.2:12866002-12866021 MS.gene64745:intron 25.0%
AAAACATACTGAACTACATG+TGG + chr5.2:12870315-12870334 MS.gene64745:intron 30.0%
AAAATATTGTGTTCGGTTGT+GGG - chr5.2:12868008-12868027 None:intergenic 30.0%
AAATGATGACTTAATTCGCT+AGG - chr5.2:12869313-12869332 None:intergenic 30.0%
AATACAAGACATGCAAAAAG+CGG + chr5.2:12866871-12866890 MS.gene64745:intron 30.0%
AATATGGATGAGTTTGGTAT+GGG + chr5.2:12865419-12865438 MS.gene64745:CDS 30.0%
AATTTCATGTGTGATATTCC+AGG - chr5.2:12869976-12869995 None:intergenic 30.0%
ACCTTCTCTATATCTAGATA+CGG + chr5.2:12868079-12868098 MS.gene64745:intron 30.0%
ATGGTCAAAGTTAACTAACT+TGG + chr5.2:12870463-12870482 MS.gene64745:intron 30.0%
ATTGAATTAAGTTTGTGAGC+AGG + chr5.2:12866595-12866614 MS.gene64745:intron 30.0%
ATTTCATGTGTGATATTCCA+GGG - chr5.2:12869975-12869994 None:intergenic 30.0%
CAAAACAAACAAACAAACAC+CGG - chr5.2:12865993-12866012 None:intergenic 30.0%
CAAGATTGAAAGTTGTCAAA+TGG + chr5.2:12870444-12870463 MS.gene64745:intron 30.0%
CACAATGGTTATGGAAATAA+GGG + chr5.2:12866210-12866229 MS.gene64745:intron 30.0%
CATTTGACAACTTTCAATCT+TGG - chr5.2:12870446-12870465 None:intergenic 30.0%
CCTATATAAATTTGACTCTG+CGG - chr5.2:12869390-12869409 None:intergenic 30.0%
CTAACATGCAATAATGCAAA+AGG - chr5.2:12868850-12868869 None:intergenic 30.0%
CTCAAAGCTCTATAAACTTT+AGG - chr5.2:12869123-12869142 None:intergenic 30.0%
CTCACTTCAAATTATGACTA+AGG - chr5.2:12865498-12865517 None:intergenic 30.0%
CTTATCATGTAAAATAGACG+TGG + chr5.2:12870089-12870108 MS.gene64745:intron 30.0%
GAGAAACCACCAATAAATAA+AGG - chr5.2:12869652-12869671 None:intergenic 30.0%
GATGCATATGTTCATTCAAT+AGG + chr5.2:12867009-12867028 MS.gene64745:intron 30.0%
GATTTAGAGAGAGATTATAG+AGG + chr5.2:12866770-12866789 MS.gene64745:intron 30.0%
GCAGAATGATAATTGCAAAT+TGG + chr5.2:12866648-12866667 MS.gene64745:intron 30.0%
GTAATGGTTATTCACTATGT+TGG + chr5.2:12867403-12867422 MS.gene64745:intron 30.0%
TAAAATATTGTGTTCGGTTG+TGG - chr5.2:12868009-12868028 None:intergenic 30.0%
TAGATTTAGAGAGATTGTAG+AGG + chr5.2:12866714-12866733 MS.gene64745:intron 30.0%
TCACAATGGTTATGGAAATA+AGG + chr5.2:12866209-12866228 MS.gene64745:intron 30.0%
TGAAATTGAGAAGGATTAGA+AGG - chr5.2:12868182-12868201 None:intergenic 30.0%
TGACTGAATTCATGATCATT+GGG - chr5.2:12868463-12868482 None:intergenic 30.0%
TGTTCATATCACAATGGTTA+TGG + chr5.2:12866201-12866220 MS.gene64745:intron 30.0%
TTAGTCCCTAACATAATCTT+GGG - chr5.2:12865725-12865744 None:intergenic 30.0%
TTATGTGTGTTCTATGTAAC+AGG + chr5.2:12868711-12868730 MS.gene64745:intron 30.0%
TTTAGTCCCTAACATAATCT+TGG - chr5.2:12865726-12865745 None:intergenic 30.0%
TTTCCTTTATGAACTTACGT+AGG - chr5.2:12870206-12870225 None:intergenic 30.0%
! AAATTTGGCTGCAAGATTTT+CGG + chr5.2:12868201-12868220 MS.gene64745:intron 30.0%
! AACTGAAATAAGTTTTGCTC+AGG + chr5.2:12866985-12867004 MS.gene64745:intron 30.0%
! AGCCAAATTTGAAATTGAGA+AGG - chr5.2:12868191-12868210 None:intergenic 30.0%
! ATACATGCCCACATTATTTT+AGG - chr5.2:12870525-12870544 None:intergenic 30.0%
! ATCAATCCTGGGAATAATTT+TGG - chr5.2:12869949-12869968 None:intergenic 30.0%
! CAATAATGTAATTTGTCAGG+AGG + chr5.2:12867530-12867549 MS.gene64745:intron 30.0%
! CACGTCTATTTTACATGATA+AGG - chr5.2:12870091-12870110 None:intergenic 30.0%
! GGTGAAAATGAGAATTTTGA+TGG + chr5.2:12868318-12868337 MS.gene64745:intron 30.0%
! TGTGTTTTTCTTTTCCAGTT+TGG + chr5.2:12866030-12866049 MS.gene64745:intron 30.0%
! TGTTTGCCTTTATTTATTGG+TGG + chr5.2:12869643-12869662 MS.gene64745:intron 30.0%
! TTAACTAACTTGGTCTTTCT+GGG + chr5.2:12870473-12870492 MS.gene64745:intron 30.0%
! TTTTTCTTTTCCAGTTTGGA+CGG + chr5.2:12866034-12866053 MS.gene64745:intron 30.0%
!! GCATGTTGATTTATAAACGT+GGG + chr5.2:12870115-12870134 MS.gene64745:intron 30.0%
!! TACCTTTCTAAAGAGCATTA+AGG + chr5.2:12869881-12869900 MS.gene64745:intron 30.0%
!! TTTCTAAAGAGCATTAAGGA+GGG + chr5.2:12869885-12869904 MS.gene64745:intron 30.0%
!! TTTTAACTCTGCAAGTTCTT+TGG + chr5.2:12867572-12867591 MS.gene64745:CDS 30.0%
!!! ATTTTTTATTGTTGTTCCCC+TGG + chr5.2:12870178-12870197 MS.gene64745:intron 30.0%
!!! GGACTCAGCTTAATATTTTT+TGG + chr5.2:12868485-12868504 MS.gene64745:intron 30.0%
AAATCCACATGGTAAAACCA+AGG - chr5.2:12869712-12869731 None:intergenic 35.0%
AACAGGTGAGAACCATTATA+AGG + chr5.2:12868728-12868747 MS.gene64745:intron 35.0%
AACTCATACTTGCTTACTTG+AGG - chr5.2:12867332-12867351 None:intergenic 35.0%
AAGACGAATATGGATGAGTT+TGG + chr5.2:12865413-12865432 MS.gene64745:CDS 35.0%
AGACACATAAAGAACAAGAG+TGG - chr5.2:12868560-12868579 None:intergenic 35.0%
AGAGAGATTATAGAGGATCT+GGG + chr5.2:12866777-12866796 MS.gene64745:intron 35.0%
AGTTCTCCCAAGATTATGTT+AGG + chr5.2:12865716-12865735 MS.gene64745:intron 35.0%
ATAAAGGCAAACATTATGCC+CGG - chr5.2:12869636-12869655 None:intergenic 35.0%
ATACAAGACATGCAAAAAGC+GGG + chr5.2:12866872-12866891 MS.gene64745:intron 35.0%
ATATGGATGAGTTTGGTATG+GGG + chr5.2:12865420-12865439 MS.gene64745:CDS 35.0%
ATCATAGTAACCAGCTGAAA+GGG - chr5.2:12868353-12868372 None:intergenic 35.0%
ATCCGTGAAACTATTGAAGA+TGG + chr5.2:12867630-12867649 MS.gene64745:CDS 35.0%
ATGATCATGAATTCAGTCAC+TGG + chr5.2:12868464-12868483 MS.gene64745:intron 35.0%
ATGTCACCAAAATTATTCCC+AGG + chr5.2:12869940-12869959 MS.gene64745:intron 35.0%
ATTGACGAGGGGTTAAATAT+AGG + chr5.2:12865745-12865764 MS.gene64745:intron 35.0%
CACCATCTTCAATAGTTTCA+CGG - chr5.2:12867635-12867654 None:intergenic 35.0%
CAGGAGTTCAACATTTGTTT+GGG + chr5.2:12866614-12866633 MS.gene64745:intron 35.0%
CATCAAACAAACGTTTCCTT+AGG - chr5.2:12869923-12869942 None:intergenic 35.0%
CATTATCTCTTGTAGAACTC+AGG - chr5.2:12870551-12870570 None:intergenic 35.0%
CCAGGAAAACAAATCATCAA+CGG - chr5.2:12870029-12870048 None:intergenic 35.0%
CCATGTGGATTTATTGAGAA+TGG + chr5.2:12869720-12869739 MS.gene64745:CDS 35.0%
CCATTCTCAATAAATCCACA+TGG - chr5.2:12869723-12869742 None:intergenic 35.0%
CCGCAGAGTCAAATTTATAT+AGG + chr5.2:12869387-12869406 MS.gene64745:intron 35.0%
CCTTCAGCTGCTTATAAAAT+TGG + chr5.2:12868805-12868824 MS.gene64745:CDS 35.0%
GAATATGGATGAGTTTGGTA+TGG + chr5.2:12865418-12865437 MS.gene64745:CDS 35.0%
GAGTTTGAGAGAAAAATGAG+TGG - chr5.2:12867737-12867756 None:intergenic 35.0%
GGAGATATCAAAATAAGGGA+TGG + chr5.2:12866154-12866173 MS.gene64745:intron 35.0%
GTACCTACGTAAGTTCATAA+AGG + chr5.2:12870200-12870219 MS.gene64745:intron 35.0%
GTATCTAGATATAGAGAAGG+TGG - chr5.2:12868080-12868099 None:intergenic 35.0%
GTGACTGAATTCATGATCAT+TGG - chr5.2:12868464-12868483 None:intergenic 35.0%
GTTCTCCCAAGATTATGTTA+GGG + chr5.2:12865717-12865736 MS.gene64745:intron 35.0%
GTTGTTTGTTCTCTGTATGT+TGG + chr5.2:12866900-12866919 MS.gene64745:intron 35.0%
TATGAGTTCTTCACTGTGTT+TGG + chr5.2:12867344-12867363 MS.gene64745:intron 35.0%
TCCGTATCTAGATATAGAGA+AGG - chr5.2:12868083-12868102 None:intergenic 35.0%
TCTTTGTCTTTGACATTTGC+AGG + chr5.2:12868890-12868909 MS.gene64745:intron 35.0%
TGAGCTGCGTAATAAAAGAA+CGG + chr5.2:12866426-12866445 MS.gene64745:intron 35.0%
TGAGGAATCATGATGATTGA+TGG + chr5.2:12866378-12866397 MS.gene64745:intron 35.0%
TGCATCACTATATGCATCAT+CGG - chr5.2:12866829-12866848 None:intergenic 35.0%
TGTCTCAAGATTTGGACTTA+TGG + chr5.2:12867204-12867223 MS.gene64745:CDS 35.0%
TTCGCTAGGATATTCCTTTA+TGG - chr5.2:12869299-12869318 None:intergenic 35.0%
TTGACGAGGGGTTAAATATA+GGG + chr5.2:12865746-12865765 MS.gene64745:intron 35.0%
TTGAGCTTACGTATTACTGT+TGG + chr5.2:12870403-12870422 MS.gene64745:intron 35.0%
TTGGTCCTGACTTTCAAATA+GGG + chr5.2:12865630-12865649 MS.gene64745:intron 35.0%
TTTGAGAGAAAAATGAGTGG+AGG - chr5.2:12867734-12867753 None:intergenic 35.0%
TTTGGTCCTGACTTTCAAAT+AGG + chr5.2:12865629-12865648 MS.gene64745:intron 35.0%
TTTGTTCTCTGTATGTTGGT+GGG + chr5.2:12866904-12866923 MS.gene64745:intron 35.0%
! ACAACAGGGCATTTCAAATT+TGG - chr5.2:12866490-12866509 None:intergenic 35.0%
! ATGATGATTGATGGTCTACT+TGG + chr5.2:12866387-12866406 MS.gene64745:intron 35.0%
! CAGTGACACCTTTAAGTTAA+TGG - chr5.2:12867848-12867867 None:intergenic 35.0%
! CCAATTTTATAAGCAGCTGA+AGG - chr5.2:12868808-12868827 None:intergenic 35.0%
! CTCCTTAATGCTCTTTAGAA+AGG - chr5.2:12869886-12869905 None:intergenic 35.0%
! GAGTTCTAGTTACTCCATAA+AGG + chr5.2:12869282-12869301 MS.gene64745:intron 35.0%
! GGTCTTTCTGGGTAAAATTT+TGG + chr5.2:12870484-12870503 MS.gene64745:intron 35.0%
! GTTAACTAACTTGGTCTTTC+TGG + chr5.2:12870472-12870491 MS.gene64745:intron 35.0%
! TACAGATTTGTTCCACCAAT+CGG + chr5.2:12870719-12870738 MS.gene64745:CDS 35.0%
! TGGCTTGGAATTTATTTGCA+GGG + chr5.2:12870650-12870669 MS.gene64745:intron 35.0%
! TTAGAAGTTTGGGATCTACA+AGG + chr5.2:12868684-12868703 MS.gene64745:intron 35.0%
! TTCTTTAAGAAACTATGCCC+AGG - chr5.2:12870047-12870066 None:intergenic 35.0%
! TTTTCTTTTCCAGTTTGGAC+GGG + chr5.2:12866035-12866054 MS.gene64745:intron 35.0%
!! AAGTTTATAGAGCTTTGAGC+AGG + chr5.2:12869124-12869143 MS.gene64745:intron 35.0%
!! CATTTTGCTTTAGATTGGGT+TGG + chr5.2:12870275-12870294 MS.gene64745:intron 35.0%
!! CGCATGTTGATTTATAAACG+TGG + chr5.2:12870114-12870133 MS.gene64745:intron 35.0%
!! CTTTCTAAAGAGCATTAAGG+AGG + chr5.2:12869884-12869903 MS.gene64745:intron 35.0%
!! GTGACGTAGTTGATAGTAAA+TGG + chr5.2:12865799-12865818 MS.gene64745:intron 35.0%
!! TTGGCTTGGAATTTATTTGC+AGG + chr5.2:12870649-12870668 MS.gene64745:intron 35.0%
!! TTGGTGGTTTCTCTTTTTAC+AGG + chr5.2:12869659-12869678 MS.gene64745:intron 35.0%
!!! CGTTGATGATTTGTTTTCCT+GGG + chr5.2:12870027-12870046 MS.gene64745:intron 35.0%
!!! GGCTATGGTTTTTTAGAGTT+TGG + chr5.2:12866929-12866948 MS.gene64745:intron 35.0%
!!! TAGAATCATCCTTTTTGGCT+TGG + chr5.2:12870635-12870654 MS.gene64745:intron 35.0%
AAGATGATTCAGACAAAGCG+AGG - chr5.2:12867906-12867925 None:intergenic 40.0%
ACCAATTCTCAGACCTTTCA+AGG - chr5.2:12867607-12867626 None:intergenic 40.0%
AGGGAGATGGTTAAAACCTA+AGG + chr5.2:12869904-12869923 MS.gene64745:intron 40.0%
AGGGATGGAGAAAAAGACTA+AGG + chr5.2:12866169-12866188 MS.gene64745:intron 40.0%
ATACTTCTCCATGCAATTGC+TGG + chr5.2:12867286-12867305 MS.gene64745:CDS 40.0%
ATATTACAAACGAGCACAGC+AGG + chr5.2:12868375-12868394 MS.gene64745:CDS 40.0%
ATGAACTTACGTAGGTACCA+GGG - chr5.2:12870198-12870217 None:intergenic 40.0%
CAACAAACAGAGACACACTA+CGG - chr5.2:12865960-12865979 None:intergenic 40.0%
CATCATAGTAACCAGCTGAA+AGG - chr5.2:12868354-12868373 None:intergenic 40.0%
CCAATTCTCAGACCTTTCAA+GGG - chr5.2:12867606-12867625 None:intergenic 40.0%
CTAGCTCATCAGCATAAACT+TGG - chr5.2:12868108-12868127 None:intergenic 40.0%
CTATGATGGTATTAGGTCAG+TGG + chr5.2:12867939-12867958 MS.gene64745:intron 40.0%
CTGCACCATAAAGCAATTGT+AGG - chr5.2:12866678-12866697 None:intergenic 40.0%
GAACGTCGATAAGACAACAT+AGG - chr5.2:12868649-12868668 None:intergenic 40.0%
GAACTTGCAGTTACTTAGGA+GGG + chr5.2:12870137-12870156 MS.gene64745:intron 40.0%
GAGAGAGATTATAGAGGATC+TGG + chr5.2:12866776-12866795 MS.gene64745:intron 40.0%
GATCGCCTACAATTGCTTTA+TGG + chr5.2:12866670-12866689 MS.gene64745:intron 40.0%
GATTGGTGCAGCATTTAATG+AGG + chr5.2:12869773-12869792 MS.gene64745:CDS 40.0%
GCAGGAGTTCAACATTTGTT+TGG + chr5.2:12866613-12866632 MS.gene64745:intron 40.0%
GCATCACTATATGCATCATC+GGG - chr5.2:12866828-12866847 None:intergenic 40.0%
GCTTACGTATTACTGTTGGT+AGG + chr5.2:12870407-12870426 MS.gene64745:intron 40.0%
GTGAAGAGAGTTAAGGAGTT+GGG + chr5.2:12865374-12865393 MS.gene64745:CDS 40.0%
GTTAGGGACTAAATTGACGA+GGG + chr5.2:12865733-12865752 MS.gene64745:intron 40.0%
GTTTGTTCTCTGTATGTTGG+TGG + chr5.2:12866903-12866922 MS.gene64745:intron 40.0%
TACAAGACATGCAAAAAGCG+GGG + chr5.2:12866873-12866892 MS.gene64745:intron 40.0%
TAGAGAGATTGTAGAGGATC+CGG + chr5.2:12866720-12866739 MS.gene64745:intron 40.0%
TATCATGACCAGCAATTGCA+TGG - chr5.2:12867297-12867316 None:intergenic 40.0%
TATGAACTTACGTAGGTACC+AGG - chr5.2:12870199-12870218 None:intergenic 40.0%
TATGGACGTGTCTCAAGATT+TGG + chr5.2:12867196-12867215 MS.gene64745:CDS 40.0%
TCATACTTGCTTACTTGAGG+TGG - chr5.2:12867329-12867348 None:intergenic 40.0%
TCTGGGTCAGTTGAAAATTG+TGG + chr5.2:12866794-12866813 MS.gene64745:intron 40.0%
TGAGTGCTCTCAAATCACTA+GGG - chr5.2:12865910-12865929 None:intergenic 40.0%
TGTCTCGCTATGATGGTATT+AGG + chr5.2:12867932-12867951 MS.gene64745:CDS 40.0%
TGTTAGGGACTAAATTGACG+AGG + chr5.2:12865732-12865751 MS.gene64745:intron 40.0%
TGTTGTTGGGAAGACGAATA+TGG + chr5.2:12865403-12865422 MS.gene64745:CDS 40.0%
TTAGGGACTAAATTGACGAG+GGG + chr5.2:12865734-12865753 MS.gene64745:intron 40.0%
TTATTGAGAATGGACCGACA+GGG + chr5.2:12869730-12869749 MS.gene64745:CDS 40.0%
TTGAGTGCTCTCAAATCACT+AGG - chr5.2:12865911-12865930 None:intergenic 40.0%
TTGGAAAGTAAGCCCTTGAA+AGG + chr5.2:12867591-12867610 MS.gene64745:CDS 40.0%
TTTATGGTGCAGTCTCTGTA+GGG + chr5.2:12866686-12866705 MS.gene64745:intron 40.0%
TTTATTGAGAATGGACCGAC+AGG + chr5.2:12869729-12869748 MS.gene64745:CDS 40.0%
! GTAGGTTTGAAGCCAACATA+TGG + chr5.2:12867178-12867197 MS.gene64745:CDS 40.0%
! TATGAGAAGGTATGAGTGAG+AGG + chr5.2:12866529-12866548 MS.gene64745:intron 40.0%
! TGGTGTTCTTGTTGCTGTTA+AGG + chr5.2:12865268-12865287 MS.gene64745:CDS 40.0%
!! AAGATGAAGCTCTAAACCAC+TGG - chr5.2:12869560-12869579 None:intergenic 40.0%
!! AGATGAAGCTCTAAACCACT+GGG - chr5.2:12869559-12869578 None:intergenic 40.0%
!! ATTGAAGATGGTGTTGATGC+TGG + chr5.2:12867642-12867661 MS.gene64745:CDS 40.0%
!! GAATAGCTTTAAGGAAGCAC+TGG + chr5.2:12868750-12868769 MS.gene64745:CDS 40.0%
!! TGATGCTGCTTCACATTTTG+AGG + chr5.2:12867683-12867702 MS.gene64745:CDS 40.0%
!!! CCGTTGATGATTTGTTTTCC+TGG + chr5.2:12870026-12870045 MS.gene64745:intron 40.0%
!!! GCTTCACATTTTGAGGCATT+AGG + chr5.2:12867690-12867709 MS.gene64745:CDS 40.0%
AAAGAGTGGAACGTGGAGTT+TGG - chr5.2:12864977-12864996 None:intergenic 45.0%
AAAGCGAGGACATAGTATGC+TGG - chr5.2:12867892-12867911 None:intergenic 45.0%
AAGAGAGTTAAGGAGTTGGG+TGG + chr5.2:12865377-12865396 MS.gene64745:CDS 45.0%
ACAACACCGCAAAAAGATGC+CGG - chr5.2:12867160-12867179 None:intergenic 45.0%
ACCATCATAGCGAGACAAGT+TGG - chr5.2:12867929-12867948 None:intergenic 45.0%
AGAGAGATTGTAGAGGATCC+GGG + chr5.2:12866721-12866740 MS.gene64745:intron 45.0%
AGAGAGTTAAGGAGTTGGGT+GGG + chr5.2:12865378-12865397 MS.gene64745:CDS 45.0%
AGGCAGTGTGTTGTATCGTT+GGG + chr5.2:12867106-12867125 MS.gene64745:CDS 45.0%
ATAACTAGTTGTGCACCCAG+TGG + chr5.2:12869541-12869560 MS.gene64745:intron 45.0%
ATGCTGCACCAATCATTTGC+AGG - chr5.2:12869767-12869786 None:intergenic 45.0%
ATTAGGATGCTCTGTGAACG+AGG + chr5.2:12867707-12867726 MS.gene64745:CDS 45.0%
ATTCCAGGGACAATCAATCC+TGG - chr5.2:12869961-12869980 None:intergenic 45.0%
CACTGAACTTCATGTTGACG+AGG + chr5.2:12869818-12869837 MS.gene64745:intron 45.0%
CACTGAAGCTTCTGCTTATC+AGG + chr5.2:12865448-12865467 MS.gene64745:CDS 45.0%
CAGGTAAATGTCAACCTAGC+TGG + chr5.2:12869678-12869697 MS.gene64745:intron 45.0%
CCCTTGAAAGGTCTGAGAAT+TGG + chr5.2:12867603-12867622 MS.gene64745:CDS 45.0%
CGAGGATACTTGAGGGTTAT+CGG + chr5.2:12865330-12865349 MS.gene64745:CDS 45.0%
CTCAGTTTACATGAGCATGC+CGG + chr5.2:12869614-12869633 MS.gene64745:intron 45.0%
CTGATAAGCAGAAGCTTCAG+TGG - chr5.2:12865450-12865469 None:intergenic 45.0%
CTTGAGACACGTCCATATGT+TGG - chr5.2:12867193-12867212 None:intergenic 45.0%
CTTTATGGTGCAGTCTCTGT+AGG + chr5.2:12866685-12866704 MS.gene64745:intron 45.0%
GAGTGAGAGGTGACAATATG+TGG + chr5.2:12866542-12866561 MS.gene64745:intron 45.0%
GAGTGGATGTATATCGTGTC+TGG - chr5.2:12868543-12868562 None:intergenic 45.0%
GATCCTTTGGCTATGTATGC+TGG + chr5.2:12868926-12868945 MS.gene64745:CDS 45.0%
GATGAGCTAGACTCTCTCTA+TGG + chr5.2:12868118-12868137 MS.gene64745:CDS 45.0%
GGAACTTGCAGTTACTTAGG+AGG + chr5.2:12870136-12870155 MS.gene64745:intron 45.0%
GGCATAAACCAGCAGTTATG+TGG - chr5.2:12869150-12869169 None:intergenic 45.0%
GGTGAAGAGAGTTAAGGAGT+TGG + chr5.2:12865373-12865392 MS.gene64745:CDS 45.0%
GTATCGTTGGGAAGTGATAC+TGG + chr5.2:12867118-12867137 MS.gene64745:CDS 45.0%
GTGGGAACTTGCAGTTACTT+AGG + chr5.2:12870133-12870152 MS.gene64745:intron 45.0%
TACCTCAGAACCTAACCCTT+TGG - chr5.2:12868155-12868174 None:intergenic 45.0%
TCACCAGCATACATAGCCAA+AGG - chr5.2:12868932-12868951 None:intergenic 45.0%
TCAGTTTACATGAGCATGCC+GGG + chr5.2:12869615-12869634 MS.gene64745:intron 45.0%
TCCAACTTGTCTCGCTATGA+TGG + chr5.2:12867925-12867944 MS.gene64745:CDS 45.0%
TGAACTTACGTAGGTACCAG+GGG - chr5.2:12870197-12870216 None:intergenic 45.0%
TTCCAGGGACAATCAATCCT+GGG - chr5.2:12869960-12869979 None:intergenic 45.0%
TTGGGCTAAGAAGACTTGAG+AGG - chr5.2:12868445-12868464 None:intergenic 45.0%
! AGTTGGGTGGGATTGTTGTT+GGG + chr5.2:12865390-12865409 MS.gene64745:CDS 45.0%
! CATTGGCTGCTTTGGTTCAT+CGG + chr5.2:12867249-12867268 MS.gene64745:CDS 45.0%
! GTGATACTGGTGGAAGTATG+AGG + chr5.2:12867131-12867150 MS.gene64745:CDS 45.0%
! TTCTCTGTATGTTGGTGGGT+TGG + chr5.2:12866908-12866927 MS.gene64745:intron 45.0%
!! AAGAGCATTAAGGAGGGAGA+TGG + chr5.2:12869891-12869910 MS.gene64745:intron 45.0%
!!! GCATCTTTTTGCGGTGTTGT+AGG + chr5.2:12867160-12867179 MS.gene64745:CDS 45.0%
AAGAGGACCAATTTCCTCGC+CGG - chr5.2:12865246-12865265 None:intergenic 50.0%
AAGCGTGAAAGAGTGGAACG+TGG - chr5.2:12864984-12865003 None:intergenic 50.0%
AAGTATCCTCGATCCACCAG+TGG - chr5.2:12865321-12865340 None:intergenic 50.0%
AATAGGTGACTACCAACCCG+TGG + chr5.2:12867026-12867045 MS.gene64745:intron 50.0%
ACGGAGGGTGAGAATTTGAG+AGG - chr5.2:12865066-12865085 None:intergenic 50.0%
AGAGACACACTACGGTGCAA+AGG - chr5.2:12865952-12865971 None:intergenic 50.0%
AGAGTAGCTTGGGTGGATGA+TGG - chr5.2:12865014-12865033 None:intergenic 50.0%
AGCCAAAGGGTTAGGTTCTG+AGG + chr5.2:12868150-12868169 MS.gene64745:CDS 50.0%
AGGGTGAGAATTTGAGAGGG+AGG - chr5.2:12865062-12865081 None:intergenic 50.0%
ATAGGTGACTACCAACCCGT+GGG + chr5.2:12867027-12867046 MS.gene64745:intron 50.0%
ATGGAGATTCCCGAGCCAAA+GGG + chr5.2:12868137-12868156 MS.gene64745:CDS 50.0%
ATGGGAGAGTCCACTAGTGT+GGG + chr5.2:12866344-12866363 MS.gene64745:intron 50.0%
CAACACTAACCCCACACTAG+TGG - chr5.2:12866357-12866376 None:intergenic 50.0%
CAACGATACAACACACTGCC+TGG - chr5.2:12867107-12867126 None:intergenic 50.0%
CAGAACCTAACCCTTTGGCT+CGG - chr5.2:12868150-12868169 None:intergenic 50.0%
CAGGCAGTGTGTTGTATCGT+TGG + chr5.2:12867105-12867124 MS.gene64745:CDS 50.0%
CCAATCATTTGCAGGCCAAC+AGG - chr5.2:12869759-12869778 None:intergenic 50.0%
CCACATGGTAAAACCAAGGC+AGG - chr5.2:12869708-12869727 None:intergenic 50.0%
CGATGAACCAAAGCAGCCAA+TGG - chr5.2:12867251-12867270 None:intergenic 50.0%
CGGAGGGTGAGAATTTGAGA+GGG - chr5.2:12865065-12865084 None:intergenic 50.0%
GAGAATTTGAGAGGGAGGTG+CGG - chr5.2:12865057-12865076 None:intergenic 50.0%
GAGGAAATTGGTCCTCTTGC+TGG + chr5.2:12865248-12865267 MS.gene64745:CDS 50.0%
GAGTAGCTTGGGTGGATGAT+GGG - chr5.2:12865013-12865032 None:intergenic 50.0%
GAGTTGGGTGGGATTGTTGT+TGG + chr5.2:12865389-12865408 MS.gene64745:CDS 50.0%
GCAACAAGAACACCAGCAAG+AGG - chr5.2:12865263-12865282 None:intergenic 50.0%
GCGTCATCACTTGATGCCAT+TGG + chr5.2:12867232-12867251 MS.gene64745:CDS 50.0%
GGGGTGTGTAAGAGTAGCTT+GGG - chr5.2:12865024-12865043 None:intergenic 50.0%
GGTGGATCGAGGATACTTGA+GGG + chr5.2:12865323-12865342 MS.gene64745:CDS 50.0%
GTCATGTGCTTGAGCGATGA+GGG - chr5.2:12865204-12865223 None:intergenic 50.0%
GTGTGTAAGAGTAGCTTGGG+TGG - chr5.2:12865021-12865040 None:intergenic 50.0%
TATGGAGATTCCCGAGCCAA+AGG + chr5.2:12868136-12868155 MS.gene64745:CDS 50.0%
TATGGGAGAGTCCACTAGTG+TGG + chr5.2:12866343-12866362 MS.gene64745:intron 50.0%
TCAACGCTATCAGCTCCGAT+TGG - chr5.2:12870737-12870756 None:intergenic 50.0%
TCGTTGGGAAGTGATACTGG+TGG + chr5.2:12867121-12867140 MS.gene64745:CDS 50.0%
TGTTCGGTTGTGGGTGTACT+TGG - chr5.2:12867999-12868018 None:intergenic 50.0%
TTCCCAGGATTGATTGTCCC+TGG + chr5.2:12869955-12869974 MS.gene64745:intron 50.0%
! AGAACCTAACCCTTTGGCTC+GGG - chr5.2:12868149-12868168 None:intergenic 50.0%
! CACTAGTGTGGGGTTAGTGT+TGG + chr5.2:12866355-12866374 MS.gene64745:intron 50.0%
! CCTGTTGGCCTGCAAATGAT+TGG + chr5.2:12869756-12869775 MS.gene64745:CDS 50.0%
! CTTGATGCCATTGGCTGCTT+TGG + chr5.2:12867241-12867260 MS.gene64745:CDS 50.0%
! GTTCATCGGTTGCTGATGCT+GGG + chr5.2:12867263-12867282 MS.gene64745:CDS 50.0%
! TGGTGGATCGAGGATACTTG+AGG + chr5.2:12865322-12865341 MS.gene64745:CDS 50.0%
!! AGTTGGTGAGAAGGGAGTGA+CGG - chr5.2:12865085-12865104 None:intergenic 50.0%
!! GTATGTTGGTGGGTTGGCTA+TGG + chr5.2:12866914-12866933 MS.gene64745:intron 50.0%
!!! CCTGCCTTGGTTTTACCATG+TGG + chr5.2:12869705-12869724 MS.gene64745:CDS 50.0%
AAGCAGCTGAAGGAGCTGCA+GGG - chr5.2:12868798-12868817 None:intergenic 55.0%
AAGGGAGGTGGAGGAAGGAA+CGG - chr5.2:12865172-12865191 None:intergenic 55.0%
ACGCTATCAGCTCCGATTGG+TGG - chr5.2:12870734-12870753 None:intergenic 55.0%
ACTTGGACGAAGAGAGCGAG+AGG - chr5.2:12867982-12868001 None:intergenic 55.0%
AGGAGGATCATCCGGAGGAT+CGG + chr5.2:12867066-12867085 MS.gene64745:CDS 55.0%
ATCCTCGATCCACCAGTGGA+CGG - chr5.2:12865317-12865336 None:intergenic 55.0%
ATCTCTGCCGGCGAGGAAAT+TGG + chr5.2:12865236-12865255 MS.gene64745:CDS 55.0%
CAACCCGTGGGATGTTTCCA+GGG + chr5.2:12867039-12867058 MS.gene64745:CDS 55.0%
CGATGAGGGAGTGGTCAGAA+GGG - chr5.2:12865190-12865209 None:intergenic 55.0%
CTAGACCGCAGAATCTCTGC+CGG + chr5.2:12865224-12865243 MS.gene64745:CDS 55.0%
CTTACAGAGACTGCACCACC+CGG - chr5.2:12866742-12866761 None:intergenic 55.0%
CTTGGACGAAGAGAGCGAGA+GGG - chr5.2:12867981-12868000 None:intergenic 55.0%
GACGGCGGTGAAGAGAGTTA+AGG + chr5.2:12865367-12865386 MS.gene64745:CDS 55.0%
GAGATTGTAGAGGATCCGGG+TGG + chr5.2:12866724-12866743 MS.gene64745:intron 55.0%
GAGGTGGGATTGGATGAGGT+CGG - chr5.2:12865120-12865139 None:intergenic 55.0%
GATTCCCGAGCCAAAGGGTT+AGG + chr5.2:12868142-12868161 MS.gene64745:CDS 55.0%
GCATGAATGCCCGTCCAAAC+TGG - chr5.2:12866047-12866066 None:intergenic 55.0%
GCGCGCCCTATTTGAAAGTC+AGG - chr5.2:12865638-12865657 None:intergenic 55.0%
GGCAACCCAAGCGAAAAGGA+CGG - chr5.2:12867871-12867890 None:intergenic 55.0%
GGGACATATGCCCTTTCAGC+TGG + chr5.2:12868340-12868359 MS.gene64745:CDS 55.0%
GGTCATGTGCTTGAGCGATG+AGG - chr5.2:12865205-12865224 None:intergenic 55.0%
TAAGCAGCTGAAGGAGCTGC+AGG - chr5.2:12868799-12868818 None:intergenic 55.0%
TGAGCAGGCCACATAACTGC+TGG + chr5.2:12869139-12869158 MS.gene64745:intron 55.0%
TGCTGGCAACCCAAGCGAAA+AGG - chr5.2:12867875-12867894 None:intergenic 55.0%
TGGGAGAGTCCACTAGTGTG+GGG + chr5.2:12866345-12866364 MS.gene64745:intron 55.0%
TTCACCGCCGTCGCATCAAA+AGG - chr5.2:12865359-12865378 None:intergenic 55.0%
TTGGACGAAGAGAGCGAGAG+GGG - chr5.2:12867980-12867999 None:intergenic 55.0%
! AAGAGAGCGAGAGGGGTACA+TGG - chr5.2:12867973-12867992 None:intergenic 55.0%
! AATTTGAGAGGGAGGTGCGG+TGG - chr5.2:12865054-12865073 None:intergenic 55.0%
! AGAGAGCGAGAGGGGTACAT+GGG - chr5.2:12867972-12867991 None:intergenic 55.0%
! AGGCAGCCGGCATCTTTTTG+CGG + chr5.2:12867151-12867170 MS.gene64745:CDS 55.0%
! CACTGCCGTCCTTTTCGCTT+GGG + chr5.2:12867863-12867882 MS.gene64745:CDS 55.0%
! GAGGGAGAAGCGTGAAAGAG+TGG - chr5.2:12864991-12865010 None:intergenic 55.0%
! GGAACGTGGAGTTTGGAGTG+TGG - chr5.2:12864970-12864989 None:intergenic 55.0%
! GGGGGTGTGTAAGAGTAGCT+TGG - chr5.2:12865025-12865044 None:intergenic 55.0%
! GGTTCATCGGTTGCTGATGC+TGG + chr5.2:12867262-12867281 MS.gene64745:CDS 55.0%
! TCACTGCCGTCCTTTTCGCT+TGG + chr5.2:12867862-12867881 MS.gene64745:CDS 55.0%
! TCGGCCTCCTTTTGATGCGA+CGG + chr5.2:12865349-12865368 MS.gene64745:CDS 55.0%
! TGGTGGAAGTATGAGGCAGC+CGG + chr5.2:12867138-12867157 MS.gene64745:CDS 55.0%
!! AGCTTGGGTGGATGATGGGA+GGG - chr5.2:12865009-12865028 None:intergenic 55.0%
!! GGAGAGGGAGTTGGTGAGAA+GGG - chr5.2:12865093-12865112 None:intergenic 55.0%
!! GTGTGGGGTTAGTGTTGGTG+AGG + chr5.2:12866360-12866379 MS.gene64745:intron 55.0%
!! TAGCTTGGGTGGATGATGGG+AGG - chr5.2:12865010-12865029 None:intergenic 55.0%
AACTGCAGCTGCCGATCCTC+CGG - chr5.2:12867080-12867099 None:intergenic 60.0%
ACCGCCGTCGCATCAAAAGG+AGG - chr5.2:12865356-12865375 None:intergenic 60.0%
AGCAGCTGAAGGAGCTGCAG+GGG - chr5.2:12868797-12868816 None:intergenic 60.0%
AGGCCAACAGGAAGCCCTGT+CGG - chr5.2:12869747-12869766 None:intergenic 60.0%
AGTGGTCAGAAGGGAGGTGG+AGG - chr5.2:12865181-12865200 None:intergenic 60.0%
CAGGGAGAGCTGCTGAGAGT+GGG + chr5.2:12870668-12870687 MS.gene64745:intron 60.0%
CCAACCCGTGGGATGTTTCC+AGG + chr5.2:12867038-12867057 MS.gene64745:CDS 60.0%
CCAAGGCAGGTAGTCCAGCT+AGG - chr5.2:12869695-12869714 None:intergenic 60.0%
CCTAGCTGGACTACCTGCCT+TGG + chr5.2:12869692-12869711 MS.gene64745:CDS 60.0%
CCTGGAAACATCCCACGGGT+TGG - chr5.2:12867041-12867060 None:intergenic 60.0%
CGGCAGAGATTCTGCGGTCT+AGG - chr5.2:12865226-12865245 None:intergenic 60.0%
CGGGTGGTGCAGTCTCTGTA+AGG + chr5.2:12866740-12866759 MS.gene64745:intron 60.0%
GAAGGAACGGAGGTGGGGTT+CGG - chr5.2:12865159-12865178 None:intergenic 60.0%
GATCCTCCGGATGATCCTCC+TGG - chr5.2:12867067-12867086 None:intergenic 60.0%
GCACCCTGGAAACATCCCAC+GGG - chr5.2:12867045-12867064 None:intergenic 60.0%
GCGATGAGGGAGTGGTCAGA+AGG - chr5.2:12865191-12865210 None:intergenic 60.0%
GGATTGGATGAGGTCGGTGG+CGG - chr5.2:12865114-12865133 None:intergenic 60.0%
GGCACCCTGGAAACATCCCA+CGG - chr5.2:12867046-12867065 None:intergenic 60.0%
GGGTGAGGTGGGATTGGATG+AGG - chr5.2:12865124-12865143 None:intergenic 60.0%
GTCAGAAGGGAGGTGGAGGA+AGG - chr5.2:12865177-12865196 None:intergenic 60.0%
GTGCTTGAGCGATGAGGGAG+TGG - chr5.2:12865199-12865218 None:intergenic 60.0%
GTGGAGGAAGGAACGGAGGT+GGG - chr5.2:12865165-12865184 None:intergenic 60.0%
GTGGGATTGGATGAGGTCGG+TGG - chr5.2:12865117-12865136 None:intergenic 60.0%
TGAGGGAGTGGTCAGAAGGG+AGG - chr5.2:12865187-12865206 None:intergenic 60.0%
TGGAGGAAGGAACGGAGGTG+GGG - chr5.2:12865164-12865183 None:intergenic 60.0%
TGGTGAGAAGGGAGTGACGG+AGG - chr5.2:12865082-12865101 None:intergenic 60.0%
! AGGGTGCCAGGAGGATCATC+CGG + chr5.2:12867058-12867077 MS.gene64745:CDS 60.0%
! GAGAGCGAGAGGGGTACATG+GGG - chr5.2:12867971-12867990 None:intergenic 60.0%
! GATGTTTCCAGGGTGCCAGG+AGG + chr5.2:12867049-12867068 MS.gene64745:CDS 60.0%
! GCCTCCTTTTGATGCGACGG+CGG + chr5.2:12865352-12865371 MS.gene64745:CDS 60.0%
! GGTGAGAAGGGAGTGACGGA+GGG - chr5.2:12865081-12865100 None:intergenic 60.0%
! TGGGATGTTTCCAGGGTGCC+AGG + chr5.2:12867046-12867065 MS.gene64745:CDS 60.0%
!! CGGAGAGGGAGTTGGTGAGA+AGG - chr5.2:12865094-12865113 None:intergenic 60.0%
ACGGCTGACATGCCGTCCAC+TGG + chr5.2:12865302-12865321 MS.gene64745:CDS 65.0%
CCTCGCCGGCAGAGATTCTG+CGG - chr5.2:12865232-12865251 None:intergenic 65.0%
CGGCAGCTGCAGTTTCTGCC+AGG + chr5.2:12867086-12867105 MS.gene64745:CDS 65.0%
GCAGGGAGAGCTGCTGAGAG+TGG + chr5.2:12870667-12870686 MS.gene64745:intron 65.0%
GCTGACATGCCGTCCACTGG+TGG + chr5.2:12865305-12865324 MS.gene64745:CDS 65.0%
GGACCGACAGGGCTTCCTGT+TGG + chr5.2:12869741-12869760 MS.gene64745:CDS 65.0%
GGAGGTGGAGGAAGGAACGG+AGG - chr5.2:12865169-12865188 None:intergenic 65.0%
GGATGATCCTCCTGGCACCC+TGG - chr5.2:12867059-12867078 None:intergenic 65.0%
GGGAGTGGTCAGAAGGGAGG+TGG - chr5.2:12865184-12865203 None:intergenic 65.0%
GGTGGAGGAAGGAACGGAGG+TGG - chr5.2:12865166-12865185 None:intergenic 65.0%
GTGCCAGGAGGATCATCCGG+AGG + chr5.2:12867061-12867080 MS.gene64745:CDS 65.0%
! TGCCGTCCACTGGTGGATCG+AGG + chr5.2:12865312-12865331 MS.gene64745:CDS 65.0%
!! GATGAGGTCGGTGGCGGAGA+GGG - chr5.2:12865108-12865127 None:intergenic 65.0%
!! GGAGGTGGGGTTCGGTGAGA+CGG - chr5.2:12865151-12865170 None:intergenic 65.0%
CCGCAGAATCTCTGCCGGCG+AGG + chr5.2:12865229-12865248 MS.gene64745:CDS 70.0%
GAGACGGAGGCGGGTGAGGT+GGG - chr5.2:12865135-12865154 None:intergenic 70.0%
GGAGGCGGGTGAGGTGGGAT+TGG - chr5.2:12865130-12865149 None:intergenic 70.0%
TGAGACGGAGGCGGGTGAGG+TGG - chr5.2:12865136-12865155 None:intergenic 70.0%
! AGGGAGGTGCGGTGGCAGGT+GGG - chr5.2:12865046-12865065 None:intergenic 70.0%
! TGAGAGGGAGGTGCGGTGGC+AGG - chr5.2:12865050-12865069 None:intergenic 70.0%
!! GGATGAGGTCGGTGGCGGAG+AGG - chr5.2:12865109-12865128 None:intergenic 70.0%
!! GGGGTTCGGTGAGACGGAGG+CGG - chr5.2:12865145-12865164 None:intergenic 70.0%
!! GGGTTCGGTGAGACGGAGGC+GGG - chr5.2:12865144-12865163 None:intergenic 70.0%
!! GGTGGGGTTCGGTGAGACGG+AGG - chr5.2:12865148-12865167 None:intergenic 70.0%
!! GTCGGTGGCGGAGAGGGAGT+TGG - chr5.2:12865102-12865121 None:intergenic 70.0%
CGGTGAGACGGAGGCGGGTG+AGG - chr5.2:12865139-12865158 None:intergenic 75.0%
GAGGTGCGGTGGCAGGTGGG+GGG - chr5.2:12865043-12865062 None:intergenic 75.0%
! GAGGGAGGTGCGGTGGCAGG+TGG - chr5.2:12865047-12865066 None:intergenic 75.0%
! GGAGGTGCGGTGGCAGGTGG+GGG - chr5.2:12865044-12865063 None:intergenic 75.0%
! GGGAGGTGCGGTGGCAGGTG+GGG - chr5.2:12865045-12865064 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 12864954 12870760 12864954 ID=MS.gene64745
chr5.2 mRNA 12864954 12870760 12864954 ID=MS.gene64745.t1;Parent=MS.gene64745
chr5.2 exon 12864954 12865469 12864954 ID=MS.gene64745.t1.exon1;Parent=MS.gene64745.t1
chr5.2 CDS 12864954 12865469 12864954 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12867031 12867342 12867031 ID=MS.gene64745.t1.exon2;Parent=MS.gene64745.t1
chr5.2 CDS 12867031 12867342 12867031 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12867549 12867728 12867549 ID=MS.gene64745.t1.exon3;Parent=MS.gene64745.t1
chr5.2 CDS 12867549 12867728 12867549 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12867859 12867953 12867859 ID=MS.gene64745.t1.exon4;Parent=MS.gene64745.t1
chr5.2 CDS 12867859 12867953 12867859 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12868096 12868171 12868096 ID=MS.gene64745.t1.exon5;Parent=MS.gene64745.t1
chr5.2 CDS 12868096 12868171 12868096 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12868319 12868396 12868319 ID=MS.gene64745.t1.exon6;Parent=MS.gene64745.t1
chr5.2 CDS 12868319 12868396 12868319 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12868733 12868826 12868733 ID=MS.gene64745.t1.exon7;Parent=MS.gene64745.t1
chr5.2 CDS 12868733 12868826 12868733 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12868912 12868961 12868912 ID=MS.gene64745.t1.exon8;Parent=MS.gene64745.t1
chr5.2 CDS 12868912 12868961 12868912 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12869681 12869794 12869681 ID=MS.gene64745.t1.exon9;Parent=MS.gene64745.t1
chr5.2 CDS 12869681 12869794 12869681 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
chr5.2 exon 12870671 12870760 12870671 ID=MS.gene64745.t1.exon10;Parent=MS.gene64745.t1
chr5.2 CDS 12870671 12870760 12870671 ID=cds.MS.gene64745.t1;Parent=MS.gene64745.t1
Gene Sequence

>MS.gene64745

ATGAAAATGCTATCCACACTCCAAACTCCACGTTCCACTCTTTCACGCTTCTCCCTCCCATCATCCACCCAAGCTACTCTTACACACCCCCCACCTGCCACCGCACCTCCCTCTCAAATTCTCACCCTCCGTCACTCCCTTCTCACCAACTCCCTCTCCGCCACCGACCTCATCCAATCCCACCTCACCCGCCTCCGTCTCACCGAACCCCACCTCCGTTCCTTCCTCCACCTCCCTTCTGACCACTCCCTCATCGCTCAAGCACATGACCTAGACCGCAGAATCTCTGCCGGCGAGGAAATTGGTCCTCTTGCTGGTGTTCTTGTTGCTGTTAAGGATAATATTTGTACGGCTGACATGCCGTCCACTGGTGGATCGAGGATACTTGAGGGTTATCGGCCTCCTTTTGATGCGACGGCGGTGAAGAGAGTTAAGGAGTTGGGTGGGATTGTTGTTGGGAAGACGAATATGGATGAGTTTGGTATGGGGAGTACCACTGAAGCTTCTGCTTATCAGGTTCTAACACTCGCTTTTCAATGTACCTTAGTCATAATTTGAAGTGAGTTTTGATTTTATGTTCTTTCTGTGAGTGTGTTTAATCTAATCTTTGAAACATTCGTCCATGAATGTATTGAAATTGCAAACACATTCACACGTGCATTTTTTATTAGTCATTTTGGTCCTGACTTTCAAATAGGGCGCGCTTAAATAATTATTAATATTTCAAAAAAGTCTCTGACTCTGTCAAATTTTACTTATATTAGTTCTCCCAAGATTATGTTAGGGACTAAATTGACGAGGGGTTAAATATAGGGACTAAATTGATTGTAAGTTGTTAAAATATAGTGACGTAGTTGATAGTAAATGGTTAAATAAAGGGACTGATTTGAAAGTTTTAATACATTTAGGAACTTTTTGAAATATTTCTAATTTCAGAGATCTATTTGAGAGCACCCTAGTGATTTGAGAGCACTCAATCCATTTCATTTTTTTTTCCTTTGCACCGTAGTGTGTCTCTGTTTGTTGTTTTTTATATCCGGTGTTTGTTTGTTTGTTTTGTTGATTTTGAGGATTAGTGTGTTTTTCTTTTCCAGTTTGGACGGGCATTCATGCTGAATTAGAATTAAGTTTGTATATTGACCTTATTTTTTAGTTTTTGGATATATATTTATTATTATTGATGTATTCAATGTTAATAATGGAGATATCAAAATAAGGGATGGAGAAAAAGACTAAGGTTTCAATAATGTTCATATCACAATGGTTATGGAAATAAGGGTTACAAAGAGAAAATATAATAAAACATAAATGACTAGACTACTAACTTAGAAATATAAAAGGCCCGATACCATAAATCCAATATACTATTATCTAACATCTAGTATTCAATATGGGAGAGTCCACTAGTGTGGGGTTAGTGTTGGTGAGGAATCATGATGATTGATGGTCTACTTGGCTGATGTCGCACATGTTGAGCTGCGTAATAAAAGAACGGTGTCTTATGCAATATGCAGTATGCATCTAAGAATGTCTCCAAATTTGAAATGCCCTGTTGTTTGTAATATTAGTAATGAATATGAGAAGGTATGAGTGAGAGGTGACAATATGTGGTTACTTGTTTAAGATATCTTGTGTTTAGCAATTGAATTAAGTTTGTGAGCAGGAGTTCAACATTTGTTTGGGAGAGAAAATGAGCAGAATGATAATTGCAAATTGGATCGCCTACAATTGCTTTATGGTGCAGTCTCTGTAGGGATTGTTAGATTTAGAGAGATTGTAGAGGATCCGGGTGGTGCAGTCTCTGTAAGGACCATTAGATTTAGAGAGAGATTATAGAGGATCTGGGTCAGTTGAAAATTGTGGATGAATAACCCGATGATGCATATAGTGATGCATTGCTAAGTTTATATTTTTGTTAATACAAGACATGCAAAAAGCGGGGTTCTGTTGTTTGTTCTCTGTATGTTGGTGGGTTGGCTATGGTTTTTTAGAGTTTGGTTTCTAGCTTTATTACTTGTACTGCCCATTTATAACTGAAATAAGTTTTGCTCAGGTGATGCATATGTTCATTCAATAGGTGACTACCAACCCGTGGGATGTTTCCAGGGTGCCAGGAGGATCATCCGGAGGATCGGCAGCTGCAGTTTCTGCCAGGCAGTGTGTTGTATCGTTGGGAAGTGATACTGGTGGAAGTATGAGGCAGCCGGCATCTTTTTGCGGTGTTGTAGGTTTGAAGCCAACATATGGACGTGTCTCAAGATTTGGACTTATGGCGTATGCGTCATCACTTGATGCCATTGGCTGCTTTGGTTCATCGGTTGCTGATGCTGGGATACTTCTCCATGCAATTGCTGGTCATGATAGATTTGATGCCACCTCAAGTAAGCAAGTATGAGTTCTTCACTGTGTTTGGTCCAAATGTTGTAAGATTTCTAAATTCTCGTTATTAGTAATGGTTATTCACTATGTTGGCTATAGTCTTTGTTCAATATGATGGATAATTGCTGAAGTTATTGCTAGTGTTTATTTGTTTTTTTCTTTGTTATGAAGCCAATTTCTTTTCAACAATGAACAATCAATAATGTAATTTGTCAGGAGGTGCCCAACTTTCTATCTCATTTTAACTCTGCAAGTTCTTTGGAAAGTAAGCCCTTGAAAGGTCTGAGAATTGGTTTGATCCGTGAAACTATTGAAGATGGTGTTGATGCTGGAGTAGTTTCTACAATTCGTGATGCTGCTTCACATTTTGAGGCATTAGGATGCTCTGTGAACGAGGTCCTCCACTCATTTTTCTCTCAAACTCTGATCTGAATGATAATTTTTTAAGTTGCTCTACAAGCTTATATTATTACAATCTACTATTCATCCGTTATTTAACCCTTTTCATTTGTCCATTAACTTAAAGGTGTCACTGCCGTCCTTTTCGCTTGGGTTGCCAGCATACTATGTCCTCGCTTTGTCTGAATCATCTTCCAACTTGTCTCGCTATGATGGTATTAGGTCAGTGGCTGACTCCCCATGTACCCCTCTCGCTCTCTTCGTCCAAGTACACCCACAACCGAACACAATATTTTATTCTGTGTTGTTTATTTTCATTAATAAATCATTTTGTTTGGCTTGGATCCACCTTCTCTATATCTAGATACGGAAACCAAGTTTATGCTGATGAGCTAGACTCTCTCTATGGAGATTCCCGAGCCAAAGGGTTAGGTTCTGAGGTACACACCTTCTAATCCTTCTCAATTTCAAATTTGGCTGCAAGATTTTCGGTAGCCTTATATATGCATATACCTGTATAAAAGAAATGATCCAATTTTGTATGTATTGTATTTTGAGCTGTCTTTCTCTTTTTTAATACATTTCAGGTGAAAATGAGAATTTTGATGGGGACATATGCCCTTTCAGCTGGTTACTATGATGCATATTACAAACGAGCACAGCAGGTACGTCTAACTTTATTTTATGTATTTCTTGGTGGGTCTGATATACCTCTCAAGTCTTCTTAGCCCAATGATCATGAATTCAGTCACTGGACTCAGCTTAATATTTTTTGGTTAAAGAAATTTATAATGTTTCAAGATTTCATCCAGACACGATATACATCCACTCTTGTTCTTTATGTGTCTTTTCGAATATGATGTTACTCAACATAGATATTGATGTGATAGTTAAATTAAACTCTTGCTTCATTTCCTATGTTGTCTTATCGACGTTCTGAATTTCATTTATTTTAGAAGTTTGGGATCTACAAGGCGTTTTATGTGTGTTCTATGTAACAGGTGAGAACCATTATAAGGAATAGCTTTAAGGAAGCACTGGATCAATATGATATCTTGATTTCCCCTGCAGCTCCTTCAGCTGCTTATAAAATTGGTAAGCATCTGTGTAGCTTTCCTTTTGCATTATTGCATGTTAGTGCCTGCAATAGTAATTGTTTCTTTGTCTTTGACATTTGCAGGTGAAAAGAAAAATGATCCTTTGGCTATGTATGCTGGTGACATCATGACTGTAAGTATTTCATTCTTCTTATCGGCTACATTTCTGTCTCATACTTCTGATTTTAATTTATGTTAATGTTAACTAGACAATTAGTGTTAAATTGAGGTTTCAACGTGTGCTGTTGAACTTCAACTCTATTGAACTTAAGCTTGATTCATACATGAGTTCCTAAAGTTTATAGAGCTTTGAGCAGGCCACATAACTGCTGGTTTATGCCTTAGATAATAGATAATCAATTAAACAATCCAAAAAATATCTTAATTAATCAATAAGTGCAGGGTTGTTGCATTGTATTAGTACCTTACCATGTGTCGAGTATATATTATTGTGAGTTCTAGTTACTCCATAAAGGAATATCCTAGCGAATTAAGTCATCATTTAGCATAAGTTGTGTTGAATTATAGAAAATAGAGGCATGATGCGTCTCAACTACACCGCAGAGTCAAATTTATATAGGCTAAGGACAATAATAACAACATAAATATAGGAGATATTTTTCTATTTACTTGATGTGATATGATACAATATGTCTATACAATAATCCTATACAATAAATACATATATGTGAATAATTTTTCAACAAGTTGCATAACTAGTTGTGCACCCAGTGGTTTAGAGCTTCATCTTCTTTATGCATTATCTGTAATTTTATTTCTAGCTACTCAGTTTACATGAGCATGCCGGGCATAATGTTTGCCTTTATTTATTGGTGGTTTCTCTTTTTACAGGTAAATGTCAACCTAGCTGGACTACCTGCCTTGGTTTTACCATGTGGATTTATTGAGAATGGACCGACAGGGCTTCCTGTTGGCCTGCAAATGATTGGTGCAGCATTTAATGAGGTATTGAGTTTTCTTATCAACTACACTGAACTTCATGTTGACGAGGCTTCTCTATGCATTCTCTAGTTTTGCTTTGTTTTTTAGTCTACCTTTCTAAAGAGCATTAAGGAGGGAGATGGTTAAAACCTAAGGAAACGTTTGTTTGATGTCACCAAAATTATTCCCAGGATTGATTGTCCCTGGAATATCACACATGAAATTTGTTCCAAAGAAAGTTTAAAAATTGTTGTTCCGTTGATGATTTGTTTTCCTGGGCATAGTTTCTTAAAGAAATGATATAATTATCAAAACACCCTTATCATGTAAAATAGACGTGGCACGCATGTTGATTTATAAACGTGGGAACTTGCAGTTACTTAGGAGGGTCTAAATGAGAGTTTATGATTTTTTATTGTTGTTCCCCTGGTACCTACGTAAGTTCATAAAGGAAAGAATATTGAAAGTGAAAAAGAAAACTCTAGGTAGTTATTTTTCTCTTTACATTTTGCTTTAGATTGGGTTGGCTGCATTTTGAAAGTTCAAAACATACTGAACTACATGTGGACCAAGTGTACTTTTTTGTTCTATTTGCTAAACTTCCATGTTTATAGAAAAACTACAGATGTTTCTTGAGCTTACGTATTACTGTTGGTAGGATTTTCTTTACTTCCAAGATTGAAAGTTGTCAAATGGTCAAAGTTAACTAACTTGGTCTTTCTGGGTAAAATTTTGGTGTTGTATATTTTAACCTAAAATAATGTGGGCATGTATATGCCTGAGTTCTACAAGAGATAATGTGCATGAGTATGTCTTTGACATTGAACAATAGAATCATCCTTTTTTCCTTGAAAAAAATAAAAATAGAATCATCCTTTTTGGCTTGGAATTTATTTGCAGGGAGAGCTGCTGAGAGTGGGACATATATTTGAGCAAACTCTTGAGAATTACAGATTTGTTCCACCAATCGGAGCTGATAGCGTTGAATAA
Protein sequence

>MS.gene64745.t1

MKMLSTLQTPRSTLSRFSLPSSTQATLTHPPPATAPPSQILTLRHSLLTNSLSATDLIQSHLTRLRLTEPHLRSFLHLPSDHSLIAQAHDLDRRISAGEEIGPLAGVLVAVKDNICTADMPSTGGSRILEGYRPPFDATAVKRVKELGGIVVGKTNMDEFGMGSTTEASAYQVTTNPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSMRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQEVPNFLSHFNSASSLESKPLKGLRIGLIRETIEDGVDAGVVSTIRDAASHFEALGCSVNEVSLPSFSLGLPAYYVLALSESSSNLSRYDGIRYGNQVYADELDSLYGDSRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALDQYDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFIENGPTGLPVGLQMIGAAFNEGELLRVGHIFEQTLENYRFVPPIGADSVE