Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64784.t1 | XP_024640978.1 | 97 | 529 | 16 | 0 | 1 | 529 | 1 | 529 | 2.40E-291 | 1010.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64784.t1 | F4I9E1 | 31.3 | 543 | 342 | 12 | 13 | 534 | 43 | 575 | 2.2e-62 | 241.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64784.t1 | G7JXI0 | 97.0 | 529 | 16 | 0 | 1 | 529 | 1 | 529 | 1.8e-291 | 1010.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051694 | MS.gene64784 | -0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene64784 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene64784 | 0.813658 | 2.29E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene64784 | 0.802009 | 6.87E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene64784 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene056922 | MS.gene64784 | 0.801977 | 6.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64784.t1 | MTR_5g022380 | 96.975 | 529 | 16 | 0 | 1 | 529 | 1 | 529 | 0.0 | 1051 |
| MS.gene64784.t1 | MTR_5g022380 | 96.897 | 419 | 13 | 0 | 111 | 529 | 1 | 419 | 0.0 | 831 |
| MS.gene64784.t1 | MTR_4g073690 | 64.068 | 526 | 177 | 4 | 11 | 525 | 13 | 537 | 0.0 | 672 |
| MS.gene64784.t1 | MTR_4g073690 | 61.619 | 383 | 135 | 4 | 11 | 382 | 13 | 394 | 3.54e-161 | 464 |
| MS.gene64784.t1 | MTR_2g450710 | 36.201 | 558 | 318 | 7 | 14 | 536 | 13 | 567 | 2.01e-112 | 345 |
| MS.gene64784.t1 | MTR_4g116210 | 35.009 | 557 | 319 | 7 | 14 | 529 | 12 | 566 | 5.66e-108 | 334 |
| MS.gene64784.t1 | MTR_7g029015 | 34.083 | 578 | 318 | 7 | 12 | 531 | 14 | 586 | 6.75e-107 | 332 |
| MS.gene64784.t1 | MTR_3g099150 | 34.946 | 558 | 315 | 11 | 7 | 525 | 9 | 557 | 2.20e-100 | 314 |
| MS.gene64784.t1 | MTR_5g090570 | 35.171 | 526 | 319 | 8 | 12 | 524 | 10 | 526 | 3.23e-97 | 305 |
| MS.gene64784.t1 | MTR_2g100400 | 32.176 | 547 | 324 | 10 | 8 | 524 | 2 | 531 | 1.07e-91 | 291 |
| MS.gene64784.t1 | MTR_1g059080 | 32.182 | 550 | 334 | 9 | 13 | 529 | 24 | 567 | 3.57e-88 | 283 |
| MS.gene64784.t1 | MTR_1g111540 | 31.949 | 554 | 339 | 9 | 8 | 529 | 21 | 568 | 7.06e-88 | 283 |
| MS.gene64784.t1 | MTR_1g111510 | 32.491 | 554 | 336 | 8 | 8 | 529 | 21 | 568 | 9.07e-88 | 282 |
| MS.gene64784.t1 | MTR_1g111530 | 32.065 | 552 | 331 | 9 | 13 | 529 | 22 | 564 | 1.65e-87 | 281 |
| MS.gene64784.t1 | MTR_1g111550 | 32.734 | 556 | 335 | 9 | 13 | 536 | 25 | 573 | 1.09e-86 | 280 |
| MS.gene64784.t1 | MTR_7g102880 | 31.103 | 553 | 338 | 7 | 13 | 528 | 29 | 575 | 2.22e-85 | 276 |
| MS.gene64784.t1 | MTR_1g050550 | 31.475 | 556 | 335 | 9 | 13 | 527 | 24 | 574 | 4.40e-84 | 273 |
| MS.gene64784.t1 | MTR_7g083660 | 31.964 | 560 | 334 | 15 | 11 | 529 | 5 | 558 | 4.01e-76 | 251 |
| MS.gene64784.t1 | MTR_5g026350 | 31.449 | 566 | 335 | 14 | 11 | 528 | 5 | 565 | 6.83e-76 | 250 |
| MS.gene64784.t1 | MTR_8g071920 | 30.851 | 564 | 341 | 12 | 11 | 528 | 46 | 606 | 1.27e-71 | 240 |
| MS.gene64784.t1 | MTR_3g466040 | 31.166 | 523 | 337 | 10 | 13 | 525 | 7 | 516 | 7.53e-67 | 225 |
| MS.gene64784.t1 | MTR_3g466110 | 30.515 | 485 | 321 | 8 | 13 | 491 | 7 | 481 | 5.62e-63 | 214 |
| MS.gene64784.t1 | MTR_2g104250 | 29.052 | 327 | 171 | 8 | 236 | 536 | 12 | 303 | 1.41e-40 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64784.t1 | AT4G34950 | 62.162 | 555 | 182 | 3 | 11 | 538 | 14 | 567 | 0.0 | 714 |
| MS.gene64784.t1 | AT2G16660 | 64.436 | 523 | 179 | 2 | 10 | 525 | 11 | 533 | 0.0 | 684 |
| MS.gene64784.t1 | AT2G16660 | 62.368 | 380 | 136 | 2 | 10 | 382 | 11 | 390 | 3.25e-163 | 469 |
| MS.gene64784.t1 | AT1G80530 | 34.909 | 550 | 326 | 9 | 14 | 536 | 14 | 558 | 4.91e-110 | 339 |
| MS.gene64784.t1 | AT5G14120 | 36.684 | 567 | 307 | 6 | 8 | 525 | 11 | 574 | 1.81e-108 | 336 |
| MS.gene64784.t1 | AT3G01930 | 35.467 | 578 | 306 | 7 | 7 | 525 | 10 | 579 | 1.50e-107 | 333 |
| MS.gene64784.t1 | AT5G50520 | 34.972 | 529 | 328 | 7 | 12 | 529 | 15 | 538 | 5.05e-106 | 328 |
| MS.gene64784.t1 | AT5G50630 | 34.972 | 529 | 328 | 7 | 12 | 529 | 15 | 538 | 5.05e-106 | 328 |
| MS.gene64784.t1 | AT2G28120 | 34.935 | 541 | 321 | 6 | 8 | 522 | 12 | 547 | 1.58e-101 | 318 |
| MS.gene64784.t1 | AT2G39210 | 34.783 | 552 | 318 | 10 | 13 | 528 | 21 | 566 | 4.06e-100 | 315 |
| MS.gene64784.t1 | AT1G74780 | 33.396 | 536 | 316 | 9 | 13 | 524 | 7 | 525 | 1.87e-91 | 290 |
| MS.gene64784.t1 | AT2G34350 | 32.288 | 542 | 325 | 8 | 8 | 528 | 2 | 522 | 1.82e-88 | 282 |
| MS.gene64784.t1 | AT2G34350 | 32.288 | 542 | 325 | 8 | 8 | 528 | 2 | 522 | 1.82e-88 | 282 |
| MS.gene64784.t1 | AT1G18940 | 33.706 | 537 | 310 | 11 | 13 | 527 | 9 | 521 | 2.57e-85 | 274 |
| MS.gene64784.t1 | AT2G34355 | 31.086 | 534 | 336 | 7 | 13 | 531 | 7 | 523 | 6.84e-81 | 262 |
| MS.gene64784.t1 | AT3G01930 | 34.599 | 474 | 243 | 7 | 111 | 525 | 1 | 466 | 2.00e-77 | 251 |
| MS.gene64784.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 22 | 550 | 2.17e-73 | 243 |
| MS.gene64784.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 40 | 568 | 2.78e-73 | 243 |
| MS.gene64784.t1 | AT1G31470 | 31.667 | 540 | 334 | 14 | 12 | 528 | 42 | 569 | 7.09e-71 | 238 |
| MS.gene64784.t1 | AT4G19450 | 31.570 | 567 | 332 | 15 | 11 | 528 | 5 | 564 | 1.12e-70 | 237 |
| MS.gene64784.t1 | AT5G45275 | 30.265 | 565 | 340 | 13 | 11 | 528 | 5 | 562 | 1.61e-68 | 231 |
| MS.gene64784.t1 | AT3G01930 | 33.180 | 434 | 230 | 6 | 7 | 388 | 10 | 435 | 5.69e-68 | 226 |
| MS.gene64784.t1 | AT2G30300 | 30.368 | 517 | 327 | 9 | 14 | 523 | 8 | 498 | 1.44e-64 | 219 |
| MS.gene64784.t1 | AT4G19450 | 32.212 | 416 | 231 | 12 | 11 | 382 | 5 | 413 | 1.09e-56 | 195 |
| MS.gene64784.t1 | AT2G34355 | 29.049 | 389 | 252 | 6 | 150 | 531 | 2 | 373 | 8.67e-48 | 170 |
Find 106 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGACGCATTCTTTC+TGG | 0.067041 | 5.2:-13421278 | MS.gene64784:CDS |
| GAATATCCCCTCTTCCTTAT+TGG | 0.177151 | 5.2:-13422787 | MS.gene64784:CDS |
| CATGCTTGTGTATGTGATTA+TGG | 0.186967 | 5.2:-13420188 | MS.gene64784:CDS |
| CCCTTTAGAATGCCGGAAAT+TGG | 0.239061 | 5.2:+13421950 | None:intergenic |
| CATTTCATTCATAAGCATTT+GGG | 0.248417 | 5.2:-13421303 | MS.gene64784:CDS |
| ATGGCTTTCGCTTGTGTATT+GGG | 0.254616 | 5.2:-13420169 | MS.gene64784:CDS |
| AAAGATGTTGGTAAAGCTTT+TGG | 0.279837 | 5.2:-13422920 | MS.gene64784:CDS |
| TCTCAGATTCTGATGTTCTT+TGG | 0.295006 | 5.2:-13420481 | MS.gene64784:CDS |
| ATAAGCATTTGGGGTTTCTT+TGG | 0.297026 | 5.2:-13421293 | MS.gene64784:CDS |
| CTATTTGGTCTCAAATACTA+TGG | 0.305461 | 5.2:-13420349 | MS.gene64784:CDS |
| CAGGCATGCCAAGGTTAGTT+TGG | 0.310026 | 5.2:-13420513 | MS.gene64784:CDS |
| TCATTTCATTCATAAGCATT+TGG | 0.318055 | 5.2:-13421304 | MS.gene64784:CDS |
| CTCATTCTCAACCTTCCTAT+TGG | 0.319911 | 5.2:-13420310 | MS.gene64784:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5.2:-13421701 | MS.gene64784:CDS |
| GCAGCAGCTTCAGAACTATT+TGG | 0.325560 | 5.2:-13420364 | MS.gene64784:CDS |
| ATCATGGGATTCATTGGATA+TGG | 0.325941 | 5.2:-13422836 | MS.gene64784:CDS |
| AAGGAAGAGGGGATATTCTT+TGG | 0.328395 | 5.2:+13422792 | None:intergenic |
| TTACCAGGATCACTATATAT+TGG | 0.329554 | 5.2:-13420436 | MS.gene64784:CDS |
| TATGGCTTTCGCTTGTGTAT+TGG | 0.340093 | 5.2:-13420170 | MS.gene64784:CDS |
| AAGAATGTTACCAGCCAATA+AGG | 0.345473 | 5.2:+13422773 | None:intergenic |
| TTTCTCTGTGGTGTTGGAAC+AGG | 0.349477 | 5.2:-13421392 | MS.gene64784:CDS |
| TTGAATACGATCAAATATAA+AGG | 0.362290 | 5.2:+13421605 | None:intergenic |
| CAAGAAGTGGCATAGCTAAT+AGG | 0.363471 | 5.2:+13421630 | None:intergenic |
| ACTTCAGTTATTCTGATGAT+TGG | 0.363972 | 5.2:-13422863 | MS.gene64784:CDS |
| TATATTGGTTCAATCTTAGT+AGG | 0.367284 | 5.2:-13420421 | MS.gene64784:CDS |
| AATCTCAACTTCTTCTACCT+TGG | 0.372474 | 5.2:+13421496 | None:intergenic |
| GATGTGTATATTCTTGTGTA+TGG | 0.373027 | 5.2:-13422047 | MS.gene64784:CDS |
| TCATAAACATGTTATTTCAT+TGG | 0.374079 | 5.2:-13421675 | MS.gene64784:CDS |
| TGAACCTTTGTTGGCACAAA+AGG | 0.386700 | 5.2:-13421546 | MS.gene64784:CDS |
| TTGTTCTAAATGCAAGAAAC+AGG | 0.408668 | 5.2:+13420134 | None:intergenic |
| ATCTTAGTAGGAATATGTTA+TGG | 0.410113 | 5.2:-13420409 | MS.gene64784:CDS |
| TCCAATTTCCGGCATTCTAA+AGG | 0.410577 | 5.2:-13421951 | MS.gene64784:CDS |
| GGTGCTATCATGGGATTCAT+TGG | 0.411021 | 5.2:-13422842 | MS.gene64784:CDS |
| ACATATTGCTTGTACCCATA+TGG | 0.411307 | 5.2:+13423033 | None:intergenic |
| AGCATTAATAGAAACTTAGA+TGG | 0.417468 | 5.2:+13421866 | None:intergenic |
| CCAATTTCCGGCATTCTAAA+GGG | 0.419855 | 5.2:-13421950 | MS.gene64784:CDS |
| TTCAATATCATAAAGGTATC+CGG | 0.421548 | 5.2:+13420261 | None:intergenic |
| GTGTCATTTCTCTGTGGTGT+TGG | 0.422085 | 5.2:-13421398 | MS.gene64784:CDS |
| ACAGGTTCATGAACCTTTGT+TGG | 0.424667 | 5.2:-13421555 | MS.gene64784:CDS |
| GATGAATAACTTGGGACAAA+TGG | 0.427374 | 5.2:-13421360 | MS.gene64784:CDS |
| AGATGTGTTAAAGTCTCTAA+TGG | 0.430909 | 5.2:-13422981 | MS.gene64784:CDS |
| ACAAAAGGTTTCAGAAGAAA+AGG | 0.433859 | 5.2:-13421531 | MS.gene64784:CDS |
| TCTGATGATTGGTGCTATCA+TGG | 0.440148 | 5.2:-13422852 | MS.gene64784:CDS |
| TACAGTAGCAGTTTATCTCT+TGG | 0.443498 | 5.2:-13421717 | MS.gene64784:CDS |
| GTGCAAGTGTTTCCGCCTCC+TGG | 0.444901 | 5.2:+13420226 | None:intergenic |
| TAGGATTTGTGACAGCCATA+TGG | 0.447435 | 5.2:-13423048 | MS.gene64784:CDS |
| CAGGTCTTGTTTCTGATCGT+TGG | 0.448059 | 5.2:-13422889 | MS.gene64784:CDS |
| ATTAAAAGAAAACCGGTGAT+AGG | 0.449467 | 5.2:-13421476 | MS.gene64784:CDS |
| GAAAAGATGAATGAACCAAT+AGG | 0.463266 | 5.2:+13420295 | None:intergenic |
| ATCCCCTCTTCCTTATTGGC+TGG | 0.463390 | 5.2:-13422783 | MS.gene64784:intron |
| ATGAATAACTTGGGACAAAT+GGG | 0.466370 | 5.2:-13421359 | MS.gene64784:CDS |
| TTCGCTTGTGTATTGGGGTG+TGG | 0.467433 | 5.2:-13420163 | MS.gene64784:CDS |
| AGAGCATACTATCATTGAAA+TGG | 0.483884 | 5.2:-13421450 | MS.gene64784:CDS |
| TAGTGGCTTCAATATCATAA+AGG | 0.484536 | 5.2:+13420254 | None:intergenic |
| TGGTTACATTGCATTGGCAA+TGG | 0.486214 | 5.2:-13420461 | MS.gene64784:CDS |
| CACTCTCTGAATACTACATC+AGG | 0.489900 | 5.2:-13421253 | MS.gene64784:intron |
| GCATTGGCAATGGCCTTACC+AGG | 0.490266 | 5.2:-13420451 | MS.gene64784:CDS |
| GAACCAATATATAGTGATCC+TGG | 0.491333 | 5.2:+13420433 | None:intergenic |
| AATGAAATAACATGTTTATG+AGG | 0.496120 | 5.2:+13421677 | None:intergenic |
| CAATAGGAAGGTTGAGAATG+AGG | 0.497575 | 5.2:+13420311 | None:intergenic |
| ATCATCAGAATAACTGAAGT+TGG | 0.498832 | 5.2:+13422866 | None:intergenic |
| GGAGGCGGAAACACTTGCAC+TGG | 0.501570 | 5.2:-13420223 | MS.gene64784:CDS |
| AGTTGAGATTAAAAGAAAAC+CGG | 0.502662 | 5.2:-13421483 | MS.gene64784:CDS |
| TACATAGCCCTTTAGAATGC+CGG | 0.507305 | 5.2:+13421943 | None:intergenic |
| AGGATTTGTGACAGCCATAT+GGG | 0.515315 | 5.2:-13423047 | MS.gene64784:CDS |
| GGACAAATGGGACAGGCACT+TGG | 0.515436 | 5.2:-13421347 | MS.gene64784:CDS |
| TTGTGTATTGGGGTGTGGAT+TGG | 0.519733 | 5.2:-13420158 | MS.gene64784:CDS |
| CTCTCTGTTGCTAAAGATGT+TGG | 0.521493 | 5.2:-13422932 | MS.gene64784:CDS |
| GTTCTTTGGTTACATTGCAT+TGG | 0.523788 | 5.2:-13420467 | MS.gene64784:CDS |
| AAATGAACAAAGACACATCA+TGG | 0.536210 | 5.2:+13421321 | None:intergenic |
| AATATATAGTGATCCTGGTA+AGG | 0.541574 | 5.2:+13420438 | None:intergenic |
| ATGTGTATATTCTTGTGTAT+GGG | 0.545839 | 5.2:-13422046 | MS.gene64784:CDS |
| CTGATGATTGGTGCTATCAT+GGG | 0.547328 | 5.2:-13422851 | MS.gene64784:CDS |
| AATAGTTCTGAAGCTGCTGC+TGG | 0.557803 | 5.2:+13420367 | None:intergenic |
| GCAATGAGACAAATGATAGC+AGG | 0.561934 | 5.2:+13421833 | None:intergenic |
| ATTGAAGCCACTAGTGTACC+AGG | 0.566378 | 5.2:-13420244 | MS.gene64784:CDS |
| GTATGCTCTTCACCTATCAC+CGG | 0.568349 | 5.2:+13421464 | None:intergenic |
| TCAGTAGAAGTTGAAGCTGG+TGG | 0.572587 | 5.2:+13421788 | None:intergenic |
| GCCACTAGTGTACCAGGAGG+CGG | 0.573885 | 5.2:-13420238 | MS.gene64784:CDS |
| ATTTCATTCATAAGCATTTG+GGG | 0.573991 | 5.2:-13421302 | MS.gene64784:CDS |
| GCTGCATTCCAAACTAACCT+TGG | 0.574137 | 5.2:+13420505 | None:intergenic |
| TCATTGGATATGGAGCTCAA+TGG | 0.575598 | 5.2:-13422826 | MS.gene64784:CDS |
| GTTACCAGCCAATAAGGAAG+AGG | 0.577066 | 5.2:+13422779 | None:intergenic |
| AAATATAAAGGAACAAGAAG+TGG | 0.577288 | 5.2:+13421617 | None:intergenic |
| GGCATTCTAAAGGGCTATGT+AGG | 0.579833 | 5.2:-13421941 | MS.gene64784:CDS |
| AAGCTGGTGGAGTTTCATGA+AGG | 0.580336 | 5.2:+13421801 | None:intergenic |
| TCCGCCTCCTGGTACACTAG+TGG | 0.580549 | 5.2:+13420237 | None:intergenic |
| ATATGGGTACAAGCAATATG+TGG | 0.584975 | 5.2:-13423031 | MS.gene64784:CDS |
| GAGATAAACTGCTACTGTAA+CGG | 0.588613 | 5.2:+13421721 | None:intergenic |
| TTACCAGCCAATAAGGAAGA+GGG | 0.590414 | 5.2:+13422780 | None:intergenic |
| TGGCTTTCGCTTGTGTATTG+GGG | 0.591806 | 5.2:-13420168 | MS.gene64784:CDS |
| TCTTCAGTAGAAGTTGAAGC+TGG | 0.593843 | 5.2:+13421785 | None:intergenic |
| TGTATATTCTTGTGTATGGG+TGG | 0.598397 | 5.2:-13422043 | MS.gene64784:CDS |
| TAACTTGGGACAAATGGGAC+AGG | 0.599118 | 5.2:-13421354 | MS.gene64784:CDS |
| TAGAAACTTAGATGGGTCTG+AGG | 0.614102 | 5.2:+13421874 | None:intergenic |
| GCAGAAAATCAGGCATGCCA+AGG | 0.615589 | 5.2:-13420522 | MS.gene64784:intron |
| AGATGAATGAACCAATAGGA+AGG | 0.626849 | 5.2:+13420299 | None:intergenic |
| TTGTTTGTGTCATTTCTCTG+TGG | 0.636758 | 5.2:-13421404 | MS.gene64784:CDS |
| GCATTAATAGAAACTTAGAT+GGG | 0.651110 | 5.2:+13421867 | None:intergenic |
| ACTATGTGTGATGAATAACT+TGG | 0.651334 | 5.2:-13421369 | MS.gene64784:CDS |
| TACCAGCCAATAAGGAAGAG+GGG | 0.676035 | 5.2:+13422781 | None:intergenic |
| AAAGGAAGAGACATGCACCA+AGG | 0.681779 | 5.2:-13421513 | MS.gene64784:CDS |
| CTATGTGTGATGAATAACTT+GGG | 0.685471 | 5.2:-13421368 | MS.gene64784:CDS |
| TGGGTGGAAACAGCACAACA+TGG | 0.685598 | 5.2:-13422027 | MS.gene64784:CDS |
| GAATGCCGGAAATTGGACCA+CGG | 0.691049 | 5.2:+13421957 | None:intergenic |
| GAAGCCACTAGTGTACCAGG+AGG | 0.777264 | 5.2:-13420241 | MS.gene64784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAGTGAAATTCT+TGG | + | chr5.2:13420935-13420954 | None:intergenic | 15.0% |
| !! | CATATAAAATTAAACATTCA+AGG | + | chr5.2:13422618-13422637 | None:intergenic | 15.0% |
| !!! | CTTGAATGTTTAATTTTATA+TGG | - | chr5.2:13422616-13422635 | MS.gene64784:intron | 15.0% |
| !!! | TAAACATAGTTTTAAGAAAA+AGG | - | chr5.2:13421993-13422012 | MS.gene64784:CDS | 15.0% |
| !! | AAATCAAATAGTCATGTATA+TGG | + | chr5.2:13421966-13421985 | None:intergenic | 20.0% |
| !! | AATCAAATAGTCATGTATAT+GGG | + | chr5.2:13421965-13421984 | None:intergenic | 20.0% |
| !! | AATGAAATAACATGTTTATG+AGG | + | chr5.2:13421486-13421505 | None:intergenic | 20.0% |
| !! | ACCAATTTATTTGATTACTT+TGG | - | chr5.2:13421078-13421097 | MS.gene64784:intron | 20.0% |
| !! | ATTGATTATTTGCAATGTAA+AGG | - | chr5.2:13422093-13422112 | MS.gene64784:intron | 20.0% |
| !! | GCTGTTATTAACATATAATT+AGG | - | chr5.2:13422319-13422338 | MS.gene64784:intron | 20.0% |
| !! | TCCAAAGTAATCAAATAAAT+TGG | + | chr5.2:13421082-13421101 | None:intergenic | 20.0% |
| !! | TTGAATACGATCAAATATAA+AGG | + | chr5.2:13421558-13421577 | None:intergenic | 20.0% |
| !! | TTGATTGTAAGTTTATAACT+AGG | - | chr5.2:13422543-13422562 | MS.gene64784:intron | 20.0% |
| !!! | ACAATCAAGATTTTAAAATG+TGG | + | chr5.2:13422531-13422550 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTATATTTAGAC+AGG | - | chr5.2:13421020-13421039 | MS.gene64784:intron | 20.0% |
| !!! | ATTTGGTTAAGTTCTATTTT+TGG | - | chr5.2:13422483-13422502 | MS.gene64784:intron | 20.0% |
| !!! | TCATAAACATGTTATTTCAT+TGG | - | chr5.2:13421485-13421504 | MS.gene64784:CDS | 20.0% |
| !!! | TTAAGTTGTATATTTAGACA+GGG | - | chr5.2:13421021-13421040 | MS.gene64784:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTCTATT+TGG | - | chr5.2:13422466-13422485 | MS.gene64784:intron | 20.0% |
| ! | AAAAGATTGTGAAACTGTTT+GGG | - | chr5.2:13420845-13420864 | MS.gene64784:intron | 25.0% |
| ! | AAAATCTTAACTCATAGATC+AGG | + | chr5.2:13422028-13422047 | None:intergenic | 25.0% |
| ! | AAACAAGCCTAAAAATTATC+AGG | + | chr5.2:13420793-13420812 | None:intergenic | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+TGG | + | chr5.2:13421546-13421565 | None:intergenic | 25.0% |
| ! | AAATCTTAACTCATAGATCA+GGG | + | chr5.2:13422027-13422046 | None:intergenic | 25.0% |
| ! | AACAAGCCTAAAAATTATCA+GGG | + | chr5.2:13420792-13420811 | None:intergenic | 25.0% |
| ! | ACTGTTTAAAAAAACCAAAC+CGG | - | chr5.2:13422370-13422389 | MS.gene64784:intron | 25.0% |
| ! | AGCATTAATAGAAACTTAGA+TGG | + | chr5.2:13421297-13421316 | None:intergenic | 25.0% |
| ! | AGTTGAGATTAAAAGAAAAC+CGG | - | chr5.2:13421677-13421696 | MS.gene64784:CDS | 25.0% |
| ! | ATCTTAGTAGGAATATGTTA+TGG | - | chr5.2:13422751-13422770 | MS.gene64784:intron | 25.0% |
| ! | ATGTGTATATTCTTGTGTAT+GGG | - | chr5.2:13421114-13421133 | MS.gene64784:intron | 25.0% |
| ! | ATTTCATTCATAAGCATTTG+GGG | - | chr5.2:13421858-13421877 | MS.gene64784:CDS | 25.0% |
| ! | CATTTCATTCATAAGCATTT+GGG | - | chr5.2:13421857-13421876 | MS.gene64784:CDS | 25.0% |
| ! | CTTTACACAACTATAATCTT+TGG | + | chr5.2:13420659-13420678 | None:intergenic | 25.0% |
| ! | GCATTAATAGAAACTTAGAT+GGG | + | chr5.2:13421296-13421315 | None:intergenic | 25.0% |
| ! | TAAAAGATTGTGAAACTGTT+TGG | - | chr5.2:13420844-13420863 | MS.gene64784:intron | 25.0% |
| ! | TCATTTCATTCATAAGCATT+TGG | - | chr5.2:13421856-13421875 | MS.gene64784:CDS | 25.0% |
| ! | TGTAAGTTTATAACTAGGAA+GGG | - | chr5.2:13422548-13422567 | MS.gene64784:intron | 25.0% |
| ! | TTGTAAGTTTATAACTAGGA+AGG | - | chr5.2:13422547-13422566 | MS.gene64784:intron | 25.0% |
| !! | AAAGCTTTTGGTATTTTATC+AGG | - | chr5.2:13420252-13420271 | MS.gene64784:CDS | 25.0% |
| !! | AGATTTTTCTCTATGTATCT+TGG | + | chr5.2:13423064-13423083 | None:intergenic | 25.0% |
| !! | ATAATTTTGCAGCTGAAAAA+TGG | - | chr5.2:13420088-13420107 | MS.gene64784:CDS | 25.0% |
| !! | ATTTTATATGGCAGAAAATC+AGG | - | chr5.2:13422628-13422647 | MS.gene64784:intron | 25.0% |
| !!! | ATGAATACAACATTTTGAGA+AGG | - | chr5.2:13421050-13421069 | MS.gene64784:intron | 25.0% |
| !!! | TATATTGGTTCAATCTTAGT+AGG | - | chr5.2:13422739-13422758 | MS.gene64784:intron | 25.0% |
| !!! | TGATAATTTTTAGGCTTGTT+TGG | - | chr5.2:13420792-13420811 | MS.gene64784:intron | 25.0% |
| !!! | TTCAATATCATAAAGGTATC+CGG | + | chr5.2:13422902-13422921 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTGTTTAACTCTC+TGG | - | chr5.2:13420749-13420768 | MS.gene64784:intron | 25.0% |
| !!! | TTGGTTTTTTTAATAGTCCT+AGG | - | chr5.2:13422502-13422521 | MS.gene64784:intron | 25.0% |
| AAATGAACAAAGACACATCA+TGG | + | chr5.2:13421842-13421861 | None:intergenic | 30.0% | |
| AATATATAGTGATCCTGGTA+AGG | + | chr5.2:13422725-13422744 | None:intergenic | 30.0% | |
| AATGAACTGAAAACAGCTTA+TGG | + | chr5.2:13420900-13420919 | None:intergenic | 30.0% | |
| ACAAAAGGTTTCAGAAGAAA+AGG | - | chr5.2:13421629-13421648 | MS.gene64784:CDS | 30.0% | |
| ACTATGTGTGATGAATAACT+TGG | - | chr5.2:13421791-13421810 | MS.gene64784:CDS | 30.0% | |
| ACTTCAGTTATTCTGATGAT+TGG | - | chr5.2:13420297-13420316 | MS.gene64784:CDS | 30.0% | |
| AGAGCATACTATCATTGAAA+TGG | - | chr5.2:13421710-13421729 | MS.gene64784:CDS | 30.0% | |
| AGATGTGTTAAAGTCTCTAA+TGG | - | chr5.2:13420179-13420198 | MS.gene64784:CDS | 30.0% | |
| ATCATCAGAATAACTGAAGT+TGG | + | chr5.2:13420297-13420316 | None:intergenic | 30.0% | |
| ATGAATAACTTGGGACAAAT+GGG | - | chr5.2:13421801-13421820 | MS.gene64784:CDS | 30.0% | |
| ATTAAAAGAAAACCGGTGAT+AGG | - | chr5.2:13421684-13421703 | MS.gene64784:CDS | 30.0% | |
| ATTGAATTGTCATGAACTCT+CGG | - | chr5.2:13422437-13422456 | MS.gene64784:intron | 30.0% | |
| CAAAACCTTTAACACAAGTT+AGG | + | chr5.2:13422205-13422224 | None:intergenic | 30.0% | |
| CTATGTGTGATGAATAACTT+GGG | - | chr5.2:13421792-13421811 | MS.gene64784:CDS | 30.0% | |
| CTATTTGGTCTCAAATACTA+TGG | - | chr5.2:13422811-13422830 | MS.gene64784:CDS | 30.0% | |
| GAAAAGATGAATGAACCAAT+AGG | + | chr5.2:13422868-13422887 | None:intergenic | 30.0% | |
| GAGTTCATGACAATTCAATT+CGG | + | chr5.2:13422436-13422455 | None:intergenic | 30.0% | |
| GATGTGTATATTCTTGTGTA+TGG | - | chr5.2:13421113-13421132 | MS.gene64784:intron | 30.0% | |
| TAGTGGCTTCAATATCATAA+AGG | + | chr5.2:13422909-13422928 | None:intergenic | 30.0% | |
| TGAAATTCTTGGAGAGTTTA+TGG | + | chr5.2:13420924-13420943 | None:intergenic | 30.0% | |
| TTACCAGGATCACTATATAT+TGG | - | chr5.2:13422724-13422743 | MS.gene64784:intron | 30.0% | |
| TTAGTTCGATTCAGAACTAT+AGG | + | chr5.2:13422237-13422256 | None:intergenic | 30.0% | |
| ! | AACGAACCCTGATAATTTTT+AGG | - | chr5.2:13420783-13420802 | MS.gene64784:intron | 30.0% |
| ! | TGTTTTTCTTTGTCAACACT+AGG | + | chr5.2:13421588-13421607 | None:intergenic | 30.0% |
| ! | TTGTTCTAAATGCAAGAAAC+AGG | + | chr5.2:13423029-13423048 | None:intergenic | 30.0% |
| !! | AAAGATGTTGGTAAAGCTTT+TGG | - | chr5.2:13420240-13420259 | MS.gene64784:CDS | 30.0% |
| !! | AACTACACATAGTTGACTTT+TGG | + | chr5.2:13420731-13420750 | None:intergenic | 30.0% |
| !! | ATTGGTTCATTCATCTTTTC+TGG | - | chr5.2:13422868-13422887 | MS.gene64784:CDS | 30.0% |
| !! | TAGTGTTGACAAAGAAAAAC+AGG | - | chr5.2:13421587-13421606 | MS.gene64784:CDS | 30.0% |
| !!! | ATTTCATTGGTTTTCACAGT+AGG | - | chr5.2:13421498-13421517 | MS.gene64784:CDS | 30.0% |
| !!! | GGTGAAAACTGTTGATTTTT+GGG | - | chr5.2:13421731-13421750 | MS.gene64784:CDS | 30.0% |
| !!! | TGGTGAAAACTGTTGATTTT+TGG | - | chr5.2:13421730-13421749 | MS.gene64784:CDS | 30.0% |
| AAGAATGTTACCAGCCAATA+AGG | + | chr5.2:13420390-13420409 | None:intergenic | 35.0% | |
| AATCTCAACTTCTTCTACCT+TGG | + | chr5.2:13421667-13421686 | None:intergenic | 35.0% | |
| ACATATTGCTTGTACCCATA+TGG | + | chr5.2:13420130-13420149 | None:intergenic | 35.0% | |
| AGAAACTTTCCAAAAAACCG+TGG | - | chr5.2:13421186-13421205 | MS.gene64784:intron | 35.0% | |
| AGATGAATGAACCAATAGGA+AGG | + | chr5.2:13422864-13422883 | None:intergenic | 35.0% | |
| ATATGGGTACAAGCAATATG+TGG | - | chr5.2:13420129-13420148 | MS.gene64784:CDS | 35.0% | |
| ATCATGGGATTCATTGGATA+TGG | - | chr5.2:13420324-13420343 | MS.gene64784:CDS | 35.0% | |
| ATGAACTATCCATCACAGTT+TGG | + | chr5.2:13422401-13422420 | None:intergenic | 35.0% | |
| ATGCAACTCTGCCTTTAAAT+GGG | + | chr5.2:13420614-13420633 | None:intergenic | 35.0% | |
| CAAGAATCGATTAATCCGAA+GGG | - | chr5.2:13420559-13420578 | MS.gene64784:intron | 35.0% | |
| CATGCTTGTGTATGTGATTA+TGG | - | chr5.2:13422972-13422991 | MS.gene64784:CDS | 35.0% | |
| GAACCAATATATAGTGATCC+TGG | + | chr5.2:13422730-13422749 | None:intergenic | 35.0% | |
| GAGATAAACTGCTACTGTAA+CGG | + | chr5.2:13421442-13421461 | None:intergenic | 35.0% | |
| GATGAATAACTTGGGACAAA+TGG | - | chr5.2:13421800-13421819 | MS.gene64784:CDS | 35.0% | |
| GTTCTTTGGTTACATTGCAT+TGG | - | chr5.2:13422693-13422712 | MS.gene64784:intron | 35.0% | |
| TACAGTAGCAGTTTATCTCT+TGG | - | chr5.2:13421443-13421462 | MS.gene64784:CDS | 35.0% | |
| TATGCAACTCTGCCTTTAAA+TGG | + | chr5.2:13420615-13420634 | None:intergenic | 35.0% | |
| TCTCAGATTCTGATGTTCTT+TGG | - | chr5.2:13422679-13422698 | MS.gene64784:intron | 35.0% | |
| TGAACAAACAGCAATGACTA+GGG | + | chr5.2:13421939-13421958 | None:intergenic | 35.0% | |
| TGTATATTCTTGTGTATGGG+TGG | - | chr5.2:13421117-13421136 | MS.gene64784:intron | 35.0% | |
| TGTATATTTAGACAGGGTGT+TGG | - | chr5.2:13421027-13421046 | MS.gene64784:intron | 35.0% | |
| TGTCAATGCAATGACAGTTT+AGG | - | chr5.2:13422050-13422069 | MS.gene64784:intron | 35.0% | |
| TTGAACAAACAGCAATGACT+AGG | + | chr5.2:13421940-13421959 | None:intergenic | 35.0% | |
| ! | ATAAGCATTTGGGGTTTCTT+TGG | - | chr5.2:13421867-13421886 | MS.gene64784:CDS | 35.0% |
| ! | CTGAACCTAACTTGTGTTAA+AGG | - | chr5.2:13422197-13422216 | MS.gene64784:intron | 35.0% |
| ! | TACACAACGTGATTTGTGAA+TGG | + | chr5.2:13420501-13420520 | None:intergenic | 35.0% |
| !! | TTGTTTGTGTCATTTCTCTG+TGG | - | chr5.2:13421756-13421775 | MS.gene64784:CDS | 35.0% |
| !!! | ATTTTAAAATGTGGTCGCCT+AGG | + | chr5.2:13422522-13422541 | None:intergenic | 35.0% |
| AAAAACCGTGGTCCAATTTC+CGG | - | chr5.2:13421198-13421217 | MS.gene64784:intron | 40.0% | |
| AAACTGTTTGGGAGAGCTTA+GGG | - | chr5.2:13420856-13420875 | MS.gene64784:intron | 40.0% | |
| AAGGAAGAGGGGATATTCTT+TGG | + | chr5.2:13420371-13420390 | None:intergenic | 40.0% | |
| ACAGGTTCATGAACCTTTGT+TGG | - | chr5.2:13421605-13421624 | MS.gene64784:CDS | 40.0% | |
| AGGATTTGTGACAGCCATAT+GGG | - | chr5.2:13420113-13420132 | MS.gene64784:CDS | 40.0% | |
| ATGGCTTTCGCTTGTGTATT+GGG | - | chr5.2:13422991-13423010 | MS.gene64784:CDS | 40.0% | |
| CAAGAAGTGGCATAGCTAAT+AGG | + | chr5.2:13421533-13421552 | None:intergenic | 40.0% | |
| CAATAGGAAGGTTGAGAATG+AGG | + | chr5.2:13422852-13422871 | None:intergenic | 40.0% | |
| CACTAGGACTGTTTATGGTT+CGG | - | chr5.2:13422124-13422143 | MS.gene64784:intron | 40.0% | |
| CACTCTCTGAATACTACATC+AGG | - | chr5.2:13421907-13421926 | MS.gene64784:CDS | 40.0% | |
| CCAAGAATCGATTAATCCGA+AGG | - | chr5.2:13420558-13420577 | MS.gene64784:intron | 40.0% | |
| CCAATTTCCGGCATTCTAAA+GGG | - | chr5.2:13421210-13421229 | MS.gene64784:intron | 40.0% | |
| CTCATTCTCAACCTTCCTAT+TGG | - | chr5.2:13422850-13422869 | MS.gene64784:CDS | 40.0% | |
| CTCTCTGTTGCTAAAGATGT+TGG | - | chr5.2:13420228-13420247 | MS.gene64784:CDS | 40.0% | |
| CTCTTGGCATTTGATATCTC+TGG | - | chr5.2:13421459-13421478 | MS.gene64784:CDS | 40.0% | |
| GAATATCCCCTCTTCCTTAT+TGG | - | chr5.2:13420373-13420392 | MS.gene64784:CDS | 40.0% | |
| GCAATGAGACAAATGATAGC+AGG | + | chr5.2:13421330-13421349 | None:intergenic | 40.0% | |
| TAGAAACTTAGATGGGTCTG+AGG | + | chr5.2:13421289-13421308 | None:intergenic | 40.0% | |
| TAGGATTTGTGACAGCCATA+TGG | - | chr5.2:13420112-13420131 | MS.gene64784:CDS | 40.0% | |
| TATGGCTTTCGCTTGTGTAT+TGG | - | chr5.2:13422990-13423009 | MS.gene64784:CDS | 40.0% | |
| TCATTGGATATGGAGCTCAA+TGG | - | chr5.2:13420334-13420353 | MS.gene64784:CDS | 40.0% | |
| TCCAATTTCCGGCATTCTAA+AGG | - | chr5.2:13421209-13421228 | MS.gene64784:intron | 40.0% | |
| TCTTCAGTAGAAGTTGAAGC+TGG | + | chr5.2:13421378-13421397 | None:intergenic | 40.0% | |
| TGAACCTTTGTTGGCACAAA+AGG | - | chr5.2:13421614-13421633 | MS.gene64784:CDS | 40.0% | |
| TGCAACTCTGCCTTTAAATG+GGG | + | chr5.2:13420613-13420632 | None:intergenic | 40.0% | |
| TTACCAGCCAATAAGGAAGA+GGG | + | chr5.2:13420383-13420402 | None:intergenic | 40.0% | |
| TTCTTTGGACGCATTCTTTC+TGG | - | chr5.2:13421882-13421901 | MS.gene64784:CDS | 40.0% | |
| TTTGCAGCTGAAAAATGGCT+AGG | - | chr5.2:13420093-13420112 | MS.gene64784:CDS | 40.0% | |
| ! | CCTTCGGATTAATCGATTCT+TGG | + | chr5.2:13420561-13420580 | None:intergenic | 40.0% |
| ! | GAAACCTTTTGTGCCAACAA+AGG | + | chr5.2:13421621-13421640 | None:intergenic | 40.0% |
| ! | GTTTAACTCTCTGGTTCCTA+AGG | - | chr5.2:13420758-13420777 | MS.gene64784:intron | 40.0% |
| ! | TATCAGGGTTCGTTTTCCTT+AGG | + | chr5.2:13420777-13420796 | None:intergenic | 40.0% |
| ! | TGGTTACATTGCATTGGCAA+TGG | - | chr5.2:13422699-13422718 | MS.gene64784:intron | 40.0% |
| !! | ATCTTTTCTGGTCTCATTGC+CGG | - | chr5.2:13422880-13422899 | MS.gene64784:CDS | 40.0% |
| !! | CTGATGATTGGTGCTATCAT+GGG | - | chr5.2:13420309-13420328 | MS.gene64784:CDS | 40.0% |
| !! | GTTTATGGTTCGGTTCAAGA+AGG | - | chr5.2:13422134-13422153 | MS.gene64784:intron | 40.0% |
| !! | TACATAGCCCTTTAGAATGC+CGG | + | chr5.2:13421220-13421239 | None:intergenic | 40.0% |
| !! | TCTGATGATTGGTGCTATCA+TGG | - | chr5.2:13420308-13420327 | MS.gene64784:CDS | 40.0% |
| !!! | GAAATTGGACCACGGTTTTT+TGG | + | chr5.2:13421198-13421217 | None:intergenic | 40.0% |
| AAAGGAAGAGACATGCACCA+AGG | - | chr5.2:13421647-13421666 | MS.gene64784:CDS | 45.0% | |
| AAGCTGGTGGAGTTTCATGA+AGG | + | chr5.2:13421362-13421381 | None:intergenic | 45.0% | |
| ATTGAAGCCACTAGTGTACC+AGG | - | chr5.2:13422916-13422935 | MS.gene64784:CDS | 45.0% | |
| CGAACCATAAACAGTCCTAG+TGG | + | chr5.2:13422126-13422145 | None:intergenic | 45.0% | |
| GAAACTGTTTGGGAGAGCTT+AGG | - | chr5.2:13420855-13420874 | MS.gene64784:intron | 45.0% | |
| GCAGCAGCTTCAGAACTATT+TGG | - | chr5.2:13422796-13422815 | MS.gene64784:CDS | 45.0% | |
| GCTGCATTCCAAACTAACCT+TGG | + | chr5.2:13422658-13422677 | None:intergenic | 45.0% | |
| GTATGCTCTTCACCTATCAC+CGG | + | chr5.2:13421699-13421718 | None:intergenic | 45.0% | |
| GTTACCAGCCAATAAGGAAG+AGG | + | chr5.2:13420384-13420403 | None:intergenic | 45.0% | |
| TAACTTGGGACAAATGGGAC+AGG | - | chr5.2:13421806-13421825 | MS.gene64784:CDS | 45.0% | |
| TACCAGCCAATAAGGAAGAG+GGG | + | chr5.2:13420382-13420401 | None:intergenic | 45.0% | |
| TCAGTAGAAGTTGAAGCTGG+TGG | + | chr5.2:13421375-13421394 | None:intergenic | 45.0% | |
| TGGCTTTCGCTTGTGTATTG+GGG | - | chr5.2:13422992-13423011 | MS.gene64784:CDS | 45.0% | |
| TTGTGTATTGGGGTGTGGAT+TGG | - | chr5.2:13423002-13423021 | MS.gene64784:CDS | 45.0% | |
| ! | CAACGTGATTTGTGAATGGC+AGG | + | chr5.2:13420497-13420516 | None:intergenic | 45.0% |
| ! | GGCATTCTAAAGGGCTATGT+AGG | - | chr5.2:13421219-13421238 | MS.gene64784:intron | 45.0% |
| ! | GGTGCTATCATGGGATTCAT+TGG | - | chr5.2:13420318-13420337 | MS.gene64784:CDS | 45.0% |
| ! | TTTCTCTGTGGTGTTGGAAC+AGG | - | chr5.2:13421768-13421787 | MS.gene64784:CDS | 45.0% |
| !! | AATAGTTCTGAAGCTGCTGC+TGG | + | chr5.2:13422796-13422815 | None:intergenic | 45.0% |
| !! | ACAGTTTGGTTCTTCCGGTT+TGG | + | chr5.2:13422387-13422406 | None:intergenic | 45.0% |
| !! | CAGGTCTTGTTTCTGATCGT+TGG | - | chr5.2:13420271-13420290 | MS.gene64784:CDS | 45.0% |
| !! | CCATCACAGTTTGGTTCTTC+CGG | + | chr5.2:13422392-13422411 | None:intergenic | 45.0% |
| !! | CCCTTTAGAATGCCGGAAAT+TGG | + | chr5.2:13421213-13421232 | None:intergenic | 45.0% |
| !! | GTGTCATTTCTCTGTGGTGT+TGG | - | chr5.2:13421762-13421781 | MS.gene64784:CDS | 45.0% |
| !!! | ATTTTTTTTTTTTTTAAACT+CGG | - | chr5.2:13420527-13420546 | MS.gene64784:intron | 5.0% |
| ATCCCCTCTTCCTTATTGGC+TGG | - | chr5.2:13420377-13420396 | MS.gene64784:CDS | 50.0% | |
| CCGGAAGAACCAAACTGTGA+TGG | - | chr5.2:13422389-13422408 | MS.gene64784:intron | 50.0% | |
| GAATGCCGGAAATTGGACCA+CGG | + | chr5.2:13421206-13421225 | None:intergenic | 50.0% | |
| GCAGAAAATCAGGCATGCCA+AGG | - | chr5.2:13422638-13422657 | MS.gene64784:intron | 50.0% | |
| GCGACCACTAGGACTGTTTA+TGG | - | chr5.2:13422119-13422138 | MS.gene64784:intron | 50.0% | |
| TGGGTGGAAACAGCACAACA+TGG | - | chr5.2:13421133-13421152 | MS.gene64784:intron | 50.0% | |
| TGTAAAGGATCGCGACCACT+AGG | - | chr5.2:13422108-13422127 | MS.gene64784:intron | 50.0% | |
| TTCGCTTGTGTATTGGGGTG+TGG | - | chr5.2:13422997-13423016 | MS.gene64784:CDS | 50.0% | |
| TTGTGAGGGGCCCCATTTAA+AGG | - | chr5.2:13420600-13420619 | MS.gene64784:intron | 50.0% | |
| ! | CAGGCATGCCAAGGTTAGTT+TGG | - | chr5.2:13422647-13422666 | MS.gene64784:intron | 50.0% |
| AATCCCACCGTCCACTTGTG+AGG | - | chr5.2:13420585-13420604 | MS.gene64784:intron | 55.0% | |
| ATCCCACCGTCCACTTGTGA+GGG | - | chr5.2:13420586-13420605 | MS.gene64784:intron | 55.0% | |
| GAAGCCACTAGTGTACCAGG+AGG | - | chr5.2:13422919-13422938 | MS.gene64784:CDS | 55.0% | |
| GGACAAATGGGACAGGCACT+TGG | - | chr5.2:13421813-13421832 | MS.gene64784:CDS | 55.0% | |
| TAAATGGGGCCCCTCACAAG+TGG | + | chr5.2:13420599-13420618 | None:intergenic | 55.0% | |
| TCACAAGTGGACGGTGGGAT+TGG | + | chr5.2:13420586-13420605 | None:intergenic | 55.0% | |
| ! | GCATTGGCAATGGCCTTACC+AGG | - | chr5.2:13422709-13422728 | MS.gene64784:intron | 55.0% |
| GCCACTAGTGTACCAGGAGG+CGG | - | chr5.2:13422922-13422941 | MS.gene64784:CDS | 60.0% | |
| GGAGGCGGAAACACTTGCAC+TGG | - | chr5.2:13422937-13422956 | MS.gene64784:CDS | 60.0% | |
| GTGCAAGTGTTTCCGCCTCC+TGG | + | chr5.2:13422937-13422956 | None:intergenic | 60.0% | |
| TCCCACCGTCCACTTGTGAG+GGG | - | chr5.2:13420587-13420606 | MS.gene64784:intron | 60.0% | |
| TCCGCCTCCTGGTACACTAG+TGG | + | chr5.2:13422926-13422945 | None:intergenic | 60.0% | |
| !! | GACGGTGGGATTGGTCCCTT+CGG | + | chr5.2:13420577-13420596 | None:intergenic | 60.0% |
| GCCCCTCACAAGTGGACGGT+GGG | + | chr5.2:13420591-13420610 | None:intergenic | 65.0% | |
| TGGGGCCCCTCACAAGTGGA+CGG | + | chr5.2:13420595-13420614 | None:intergenic | 65.0% | |
| GGCCCCTCACAAGTGGACGG+TGG | + | chr5.2:13420592-13420611 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 13420069 | 13423113 | 13420069 | ID=MS.gene64784 |
| chr5.2 | mRNA | 13420069 | 13423113 | 13420069 | ID=MS.gene64784.t1;Parent=MS.gene64784 |
| chr5.2 | exon | 13422784 | 13423113 | 13422784 | ID=MS.gene64784.t1.exon1;Parent=MS.gene64784.t1 |
| chr5.2 | CDS | 13422784 | 13423113 | 13422784 | ID=cds.MS.gene64784.t1;Parent=MS.gene64784.t1 |
| chr5.2 | exon | 13421254 | 13422068 | 13421254 | ID=MS.gene64784.t1.exon2;Parent=MS.gene64784.t1 |
| chr5.2 | CDS | 13421254 | 13422068 | 13421254 | ID=cds.MS.gene64784.t1;Parent=MS.gene64784.t1 |
| chr5.2 | exon | 13420069 | 13420540 | 13420069 | ID=MS.gene64784.t1.exon3;Parent=MS.gene64784.t1 |
| chr5.2 | CDS | 13420069 | 13420540 | 13420069 | ID=cds.MS.gene64784.t1;Parent=MS.gene64784.t1 |
| Gene Sequence |
| Protein sequence |
