Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65375.t1 | XP_003618105.1 | 89.8 | 197 | 8 | 1 | 1 | 185 | 27 | 223 | 2.30E-92 | 348.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65375.t1 | G7KFE7 | 89.8 | 197 | 8 | 1 | 1 | 185 | 27 | 223 | 1.7e-92 | 348.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene65375 | -0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene049153 | MS.gene65375 | -0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene049260 | MS.gene65375 | -0.821079 | 4.89E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65375.t1 | MTR_5g099030 | 89.848 | 197 | 8 | 1 | 1 | 185 | 27 | 223 | 2.58e-128 | 359 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65375.t1 | AT4G38370 | 60.406 | 197 | 63 | 2 | 1 | 185 | 32 | 225 | 9.48e-82 | 242 |
Find 54 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTGGGTTGTTCTTGAAAA+AGG | 0.215376 | 5.2:-83764921 | None:intergenic |
| ATCGACAGTATGATCAGATT+TGG | 0.254816 | 5.2:+83765595 | MS.gene65375:intron |
| TTCAAATTCTGATTCGATAA+TGG | 0.276554 | 5.2:-83765703 | None:intergenic |
| AAATTCAATTCACAGGAAAA+TGG | 0.281279 | 5.2:+83764665 | MS.gene65375:intron |
| TTAACACTTTCCCCTCCTTC+TGG | 0.283802 | 5.2:-83765648 | None:intergenic |
| TTCAATATTAGCGGCGGTTC+AGG | 0.288734 | 5.2:+83766139 | MS.gene65375:CDS |
| TCTGGGGCCAATTGGAATTC+AGG | 0.308129 | 5.2:-83764695 | None:intergenic |
| CGCCAGTATGCTCTGAATAC+TGG | 0.357359 | 5.2:+83766185 | MS.gene65375:CDS |
| TGTGCTTGATTAACGCCGTC+TGG | 0.365035 | 5.2:-83764713 | None:intergenic |
| TCGACAGTATGATCAGATTT+GGG | 0.380484 | 5.2:+83765596 | MS.gene65375:intron |
| TCAGAGCATACTGGCGGTGC+TGG | 0.382439 | 5.2:-83766178 | None:intergenic |
| TAACGCCGTCTGGGGCCAAT+TGG | 0.412841 | 5.2:-83764703 | None:intergenic |
| ATCATGCAGATGTGCGATTC+TGG | 0.416868 | 5.2:+83766028 | MS.gene65375:intron |
| GAATTGTTTGCAAGATCTGC+AGG | 0.433814 | 5.2:-83766070 | None:intergenic |
| GATGAGAAAGATCCTCTTGT+TGG | 0.442170 | 5.2:+83765624 | MS.gene65375:CDS |
| AGTAGCGCTCACGAAGATCT+TGG | 0.456148 | 5.2:-83765004 | None:intergenic |
| GATCTTCGTGAGCGCTACTT+TGG | 0.462299 | 5.2:+83765008 | MS.gene65375:CDS |
| GTGCTTGATTAACGCCGTCT+GGG | 0.468316 | 5.2:-83764712 | None:intergenic |
| CGATTCTGGTTGTCAGCCAT+GGG | 0.469114 | 5.2:+83766042 | MS.gene65375:CDS |
| CTCCAGTATTCAGAGCATAC+TGG | 0.471623 | 5.2:-83766187 | None:intergenic |
| AGAAGGAGGGGAAAGTGTTA+AGG | 0.483555 | 5.2:+83765650 | MS.gene65375:CDS |
| TGGCGGTGCTGGGACAAGAT+TGG | 0.489709 | 5.2:-83766167 | None:intergenic |
| TATTCTCCCTGAATTCCAAT+TGG | 0.506183 | 5.2:+83764688 | MS.gene65375:CDS |
| GATCCTCTTGTTGGGCCAGA+AGG | 0.507778 | 5.2:+83765633 | MS.gene65375:CDS |
| ATGAGAAAGATCCTCTTGTT+GGG | 0.508854 | 5.2:+83765625 | MS.gene65375:CDS |
| GCGATTCTGGTTGTCAGCCA+TGG | 0.511993 | 5.2:+83766041 | MS.gene65375:CDS |
| CTGGGGCCAATTGGAATTCA+GGG | 0.512536 | 5.2:-83764694 | None:intergenic |
| GCATGCAGCTAAGAAACATA+AGG | 0.514221 | 5.2:+83766094 | MS.gene65375:CDS |
| CAGAGCATACTGGCGGTGCT+GGG | 0.532312 | 5.2:-83766177 | None:intergenic |
| TGCAACAACATTAGCAGTGT+GGG | 0.533819 | 5.2:-83764937 | None:intergenic |
| TGACTTAGCTTCAATATTAG+CGG | 0.535064 | 5.2:+83766130 | MS.gene65375:CDS |
| CTCTTGTTGGGCCAGAAGGA+GGG | 0.539146 | 5.2:+83765637 | MS.gene65375:CDS |
| GTTAATCAAGCACAACTCGC+TGG | 0.541912 | 5.2:+83764722 | MS.gene65375:CDS |
| CTCTGAATACTGGAGAGCTC+AGG | 0.547008 | 5.2:+83766195 | MS.gene65375:CDS |
| AATATTAGCGGCGGTTCAGG+TGG | 0.558199 | 5.2:+83766142 | MS.gene65375:CDS |
| CCTCCTTCTGGCCCAACAAG+AGG | 0.558622 | 5.2:-83765636 | None:intergenic |
| TTATCGAATCAGAATTTGAA+GGG | 0.563975 | 5.2:+83765706 | MS.gene65375:CDS |
| TCTTGTTGGGCCAGAAGGAG+GGG | 0.564650 | 5.2:+83765638 | MS.gene65375:CDS |
| CCTCTTGTTGGGCCAGAAGG+AGG | 0.569026 | 5.2:+83765636 | MS.gene65375:CDS |
| TGAAGCTAAGTCATCAGAAG+TGG | 0.576783 | 5.2:-83766120 | None:intergenic |
| ATTATCGAATCAGAATTTGA+AGG | 0.581174 | 5.2:+83765705 | MS.gene65375:CDS |
| TGCTTGATTAACGCCGTCTG+GGG | 0.585399 | 5.2:-83764711 | None:intergenic |
| GAATTCCAATTGGCCCCAGA+CGG | 0.595083 | 5.2:+83764698 | MS.gene65375:CDS |
| ATCATGAGATAAAAGCTCAA+AGG | 0.601806 | 5.2:-83765036 | None:intergenic |
| AATTGTTTGCAAGATCTGCA+GGG | 0.616735 | 5.2:-83766069 | None:intergenic |
| CAAATGCGCACATTAGCAAG+TGG | 0.629630 | 5.2:-83764891 | None:intergenic |
| TGAGATAAAAGCTCAAAGGA+AGG | 0.631369 | 5.2:-83765032 | None:intergenic |
| ATTGTTTGCAAGATCTGCAG+GGG | 0.632923 | 5.2:-83766068 | None:intergenic |
| CTTAGCTTCAATATTAGCGG+CGG | 0.633224 | 5.2:+83766133 | MS.gene65375:CDS |
| GAAGCTAAGTCATCAGAAGT+GGG | 0.635529 | 5.2:-83766119 | None:intergenic |
| AGATCTGCAGGGGATCCCCA+TGG | 0.642367 | 5.2:-83766058 | None:intergenic |
| TTGCAACAACATTAGCAGTG+TGG | 0.655752 | 5.2:-83764938 | None:intergenic |
| CAGTATTCAGAGCATACTGG+CGG | 0.703219 | 5.2:-83766184 | None:intergenic |
| GATTCTGGTTGTCAGCCATG+GGG | 0.723007 | 5.2:+83766043 | MS.gene65375:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGATATTACAGATAATTA+TGG | - | chr5.2:83765241-83765260 | None:intergenic | 15.0% |
| !! | GAATTTCAAATGATATTTAA+AGG | - | chr5.2:83765744-83765763 | None:intergenic | 15.0% |
| !! | TATTTATTTATTTATTGGAC+AGG | + | chr5.2:83764848-83764867 | MS.gene65375:intron | 15.0% |
| !! | TCATATTCATAAATTCTAAT+TGG | + | chr5.2:83765106-83765125 | MS.gene65375:intron | 15.0% |
| !!! | AATATCAACATTTTATATCA+CGG | - | chr5.2:83765283-83765302 | None:intergenic | 15.0% |
| !!! | AGATAGTGAATATTTTATTT+TGG | + | chr5.2:83765878-83765897 | MS.gene65375:intron | 15.0% |
| !!! | TATATCTTTAAGTATGTTTT+TGG | + | chr5.2:83765959-83765978 | MS.gene65375:intron | 15.0% |
| ! | AAATTCAATTCACAGGAAAA+TGG | + | chr5.2:83764665-83764684 | MS.gene65375:intron | 25.0% |
| ! | ATAAATTCTAATTGGCATTG+AGG | + | chr5.2:83765114-83765133 | MS.gene65375:intron | 25.0% |
| ! | ATGATATTTAAAGGCAGAAA+TGG | - | chr5.2:83765735-83765754 | None:intergenic | 25.0% |
| ! | ATTATCGAATCAGAATTTGA+AGG | + | chr5.2:83765705-83765724 | MS.gene65375:CDS | 25.0% |
| ! | CAAATTCAAATTCAATTCAC+AGG | + | chr5.2:83764658-83764677 | MS.gene65375:intron | 25.0% |
| ! | GTTTCAGCATACTATATAAA+GGG | - | chr5.2:83765534-83765553 | None:intergenic | 25.0% |
| ! | TGATATTTAAAGGCAGAAAT+GGG | - | chr5.2:83765734-83765753 | None:intergenic | 25.0% |
| ! | TTATCGAATCAGAATTTGAA+GGG | + | chr5.2:83765706-83765725 | MS.gene65375:CDS | 25.0% |
| ! | TTTCAGCATACTATATAAAG+GGG | - | chr5.2:83765533-83765552 | None:intergenic | 25.0% |
| !! | TTCAAATTCTGATTCGATAA+TGG | - | chr5.2:83765706-83765725 | None:intergenic | 25.0% |
| !! | TTTTATCTCATGATATGGTA+TGG | + | chr5.2:83765045-83765064 | MS.gene65375:intron | 25.0% |
| AAAATGAGTTTCGCAAACTA+CGG | - | chr5.2:83765559-83765578 | None:intergenic | 30.0% | |
| ACTACTTACATATTCTGTAG+CGG | + | chr5.2:83765343-83765362 | MS.gene65375:intron | 30.0% | |
| ATCATGAGATAAAAGCTCAA+AGG | - | chr5.2:83765039-83765058 | None:intergenic | 30.0% | |
| CAGATAATTATGGTGAAAAG+TGG | - | chr5.2:83765231-83765250 | None:intergenic | 30.0% | |
| GGTTTCAGCATACTATATAA+AGG | - | chr5.2:83765535-83765554 | None:intergenic | 30.0% | |
| TAATCACAGCTTAAATGATG+TGG | - | chr5.2:83765205-83765224 | None:intergenic | 30.0% | |
| TGACTTAGCTTCAATATTAG+CGG | + | chr5.2:83766130-83766149 | MS.gene65375:CDS | 30.0% | |
| ! | AATTGGCATTGAGGTATAAT+TGG | + | chr5.2:83765123-83765142 | MS.gene65375:intron | 30.0% |
| ! | GCATTGAATATTCCTTTTCA+TGG | + | chr5.2:83764963-83764982 | MS.gene65375:intron | 30.0% |
| ! | TGAGCTTTTATCTCATGATA+TGG | + | chr5.2:83765040-83765059 | MS.gene65375:CDS | 30.0% |
| AATTGTTTGCAAGATCTGCA+GGG | - | chr5.2:83766072-83766091 | None:intergenic | 35.0% | |
| ATAATTGGATAGTTAGCAGC+AGG | + | chr5.2:83765138-83765157 | MS.gene65375:intron | 35.0% | |
| ATCGACAGTATGATCAGATT+TGG | + | chr5.2:83765595-83765614 | MS.gene65375:intron | 35.0% | |
| ATGAGAAAGATCCTCTTGTT+GGG | + | chr5.2:83765625-83765644 | MS.gene65375:CDS | 35.0% | |
| ATGTAAGTAGTGGCACTAAA+CGG | - | chr5.2:83765334-83765353 | None:intergenic | 35.0% | |
| CAGTAGACTTGCAAAAACAA+TGG | + | chr5.2:83765680-83765699 | MS.gene65375:CDS | 35.0% | |
| CTTGTGCAACGTATCAATTA+GGG | + | chr5.2:83765792-83765811 | MS.gene65375:intron | 35.0% | |
| GCTACAGAATATGTAAGTAG+TGG | - | chr5.2:83765344-83765363 | None:intergenic | 35.0% | |
| TATTCTCCCTGAATTCCAAT+TGG | + | chr5.2:83764688-83764707 | MS.gene65375:CDS | 35.0% | |
| TCGACAGTATGATCAGATTT+GGG | + | chr5.2:83765596-83765615 | MS.gene65375:intron | 35.0% | |
| TGAGATAAAAGCTCAAAGGA+AGG | - | chr5.2:83765035-83765054 | None:intergenic | 35.0% | |
| TGTTTGTTTGTTTGCACGTT+AGG | - | chr5.2:83764785-83764804 | None:intergenic | 35.0% | |
| ! | ACATTTTATATCACGGTCAC+AGG | - | chr5.2:83765276-83765295 | None:intergenic | 35.0% |
| ! | CGCTGGATTTTCATTTCAAA+AGG | + | chr5.2:83764739-83764758 | MS.gene65375:CDS | 35.0% |
| ! | TGTGGGTTGTTCTTGAAAAA+GGG | - | chr5.2:83764923-83764942 | None:intergenic | 35.0% |
| !!! | CATTGTTTTTGCAAGTCTAC+TGG | - | chr5.2:83765682-83765701 | None:intergenic | 35.0% |
| AAACTCATGACTGAGTGAGT+AGG | - | chr5.2:83765409-83765428 | None:intergenic | 40.0% | |
| ATTGTTTGCAAGATCTGCAG+GGG | - | chr5.2:83766071-83766090 | None:intergenic | 40.0% | |
| CAACTTCAACTGTTGCAATG+AGG | - | chr5.2:83765376-83765395 | None:intergenic | 40.0% | |
| CTTACATATTCTGTAGCGGT+AGG | + | chr5.2:83765347-83765366 | MS.gene65375:intron | 40.0% | |
| CTTAGCTTCAATATTAGCGG+CGG | + | chr5.2:83766133-83766152 | MS.gene65375:CDS | 40.0% | |
| CTTGGATGACCTTACAATGA+GGG | - | chr5.2:83764989-83765008 | None:intergenic | 40.0% | |
| GAAGCTAAGTCATCAGAAGT+GGG | - | chr5.2:83766122-83766141 | None:intergenic | 40.0% | |
| GAATTGTTTGCAAGATCTGC+AGG | - | chr5.2:83766073-83766092 | None:intergenic | 40.0% | |
| GATGAGAAAGATCCTCTTGT+TGG | + | chr5.2:83765624-83765643 | MS.gene65375:CDS | 40.0% | |
| GCATGCAGCTAAGAAACATA+AGG | + | chr5.2:83766094-83766113 | MS.gene65375:CDS | 40.0% | |
| GCTTCAGTAAACCCTTTCTT+GGG | + | chr5.2:83765470-83765489 | MS.gene65375:intron | 40.0% | |
| GCTTGTGCAACGTATCAATT+AGG | + | chr5.2:83765791-83765810 | MS.gene65375:intron | 40.0% | |
| GTGTTAGAAAGCTCTTGTCA+CGG | - | chr5.2:83765504-83765523 | None:intergenic | 40.0% | |
| TCTTGGATGACCTTACAATG+AGG | - | chr5.2:83764990-83765009 | None:intergenic | 40.0% | |
| TGAAGCTAAGTCATCAGAAG+TGG | - | chr5.2:83766123-83766142 | None:intergenic | 40.0% | |
| TGCAACAACATTAGCAGTGT+GGG | - | chr5.2:83764940-83764959 | None:intergenic | 40.0% | |
| TGCTTCAGTAAACCCTTTCT+TGG | + | chr5.2:83765469-83765488 | MS.gene65375:intron | 40.0% | |
| TGTAAGTAGTGGCACTAAAC+GGG | - | chr5.2:83765333-83765352 | None:intergenic | 40.0% | |
| TTACAATGAGGGCCATGAAA+AGG | - | chr5.2:83764978-83764997 | None:intergenic | 40.0% | |
| TTGCAACAACATTAGCAGTG+TGG | - | chr5.2:83764941-83764960 | None:intergenic | 40.0% | |
| ! | GTGGGTTGTTCTTGAAAAAG+GGG | - | chr5.2:83764922-83764941 | None:intergenic | 40.0% |
| ! | GTGTGGGTTGTTCTTGAAAA+AGG | - | chr5.2:83764924-83764943 | None:intergenic | 40.0% |
| ! | TGCACAGGGTTTTTCATCTA+TGG | + | chr5.2:83765913-83765932 | MS.gene65375:intron | 40.0% |
| ! | TTTTCATGGCCCTCATTGTA+AGG | + | chr5.2:83764977-83764996 | MS.gene65375:intron | 40.0% |
| !!! | GTATCTGTCTTTTTTAGCCC+AGG | + | chr5.2:83765769-83765788 | MS.gene65375:intron | 40.0% |
| AATCGCACATCTGCATGATG+TGG | - | chr5.2:83766027-83766046 | None:intergenic | 45.0% | |
| ATCATGCAGATGTGCGATTC+TGG | + | chr5.2:83766028-83766047 | MS.gene65375:intron | 45.0% | |
| ATGAGTTTCGCAAACTACGG+TGG | - | chr5.2:83765556-83765575 | None:intergenic | 45.0% | |
| ATTGATACGTTGCACAAGCC+TGG | - | chr5.2:83765790-83765809 | None:intergenic | 45.0% | |
| CAAATGCGCACATTAGCAAG+TGG | - | chr5.2:83764894-83764913 | None:intergenic | 45.0% | |
| CACATCTGCATGATGTGGAA+TGG | - | chr5.2:83766022-83766041 | None:intergenic | 45.0% | |
| CAGTATTCAGAGCATACTGG+CGG | - | chr5.2:83766187-83766206 | None:intergenic | 45.0% | |
| CTCCAGTATTCAGAGCATAC+TGG | - | chr5.2:83766190-83766209 | None:intergenic | 45.0% | |
| GTCAGCTTGAAGTAACTGCA+GGG | - | chr5.2:83765818-83765837 | None:intergenic | 45.0% | |
| GTTAATCAAGCACAACTCGC+TGG | + | chr5.2:83764722-83764741 | MS.gene65375:CDS | 45.0% | |
| TGTCAGCTTGAAGTAACTGC+AGG | - | chr5.2:83765819-83765838 | None:intergenic | 45.0% | |
| TTAACACTTTCCCCTCCTTC+TGG | - | chr5.2:83765651-83765670 | None:intergenic | 45.0% | |
| TTAGAAAGCTCTTGTCACGG+CGG | - | chr5.2:83765501-83765520 | None:intergenic | 45.0% | |
| TTCAATATTAGCGGCGGTTC+AGG | + | chr5.2:83766139-83766158 | MS.gene65375:CDS | 45.0% | |
| TTGATACGTTGCACAAGCCT+GGG | - | chr5.2:83765789-83765808 | None:intergenic | 45.0% | |
| !! | AGAAGGAGGGGAAAGTGTTA+AGG | + | chr5.2:83765650-83765669 | MS.gene65375:CDS | 45.0% |
| !! | CTATTTATTTATTTATTTAT+TGG | + | chr5.2:83764843-83764862 | MS.gene65375:intron | 5.0% |
| AATATTAGCGGCGGTTCAGG+TGG | + | chr5.2:83766142-83766161 | MS.gene65375:CDS | 50.0% | |
| AGTAGCGCTCACGAAGATCT+TGG | - | chr5.2:83765007-83765026 | None:intergenic | 50.0% | |
| CTCTGAATACTGGAGAGCTC+AGG | + | chr5.2:83766195-83766214 | MS.gene65375:CDS | 50.0% | |
| CTGGGGCCAATTGGAATTCA+GGG | - | chr5.2:83764697-83764716 | None:intergenic | 50.0% | |
| GAATTCCAATTGGCCCCAGA+CGG | + | chr5.2:83764698-83764717 | MS.gene65375:CDS | 50.0% | |
| GATCTTCGTGAGCGCTACTT+TGG | + | chr5.2:83765008-83765027 | MS.gene65375:CDS | 50.0% | |
| GGCTTGTGATCTAGTGCACA+GGG | + | chr5.2:83765899-83765918 | MS.gene65375:intron | 50.0% | |
| GTGCTTGATTAACGCCGTCT+GGG | - | chr5.2:83764715-83764734 | None:intergenic | 50.0% | |
| TGCTTGATTAACGCCGTCTG+GGG | - | chr5.2:83764714-83764733 | None:intergenic | 50.0% | |
| TGTGCTTGATTAACGCCGTC+TGG | - | chr5.2:83764716-83764735 | None:intergenic | 50.0% | |
| ! | CGATTCTGGTTGTCAGCCAT+GGG | + | chr5.2:83766042-83766061 | MS.gene65375:CDS | 50.0% |
| ! | CGCCAGTATGCTCTGAATAC+TGG | + | chr5.2:83766185-83766204 | MS.gene65375:CDS | 50.0% |
| ! | GATTCTGGTTGTCAGCCATG+GGG | + | chr5.2:83766043-83766062 | MS.gene65375:CDS | 50.0% |
| ! | TCTGGGGCCAATTGGAATTC+AGG | - | chr5.2:83764698-83764717 | None:intergenic | 50.0% |
| ! | TGGCTTGTGATCTAGTGCAC+AGG | + | chr5.2:83765898-83765917 | MS.gene65375:intron | 50.0% |
| CTCTTGTTGGGCCAGAAGGA+GGG | + | chr5.2:83765637-83765656 | MS.gene65375:CDS | 55.0% | |
| GATCCTCTTGTTGGGCCAGA+AGG | + | chr5.2:83765633-83765652 | MS.gene65375:CDS | 55.0% | |
| TCTTGTTGGGCCAGAAGGAG+GGG | + | chr5.2:83765638-83765657 | MS.gene65375:CDS | 55.0% | |
| ! | GCGATTCTGGTTGTCAGCCA+TGG | + | chr5.2:83766041-83766060 | MS.gene65375:CDS | 55.0% |
| AAAGCTCTTGTCACGGCGGC+AGG | - | chr5.2:83765497-83765516 | None:intergenic | 60.0% | |
| AGATCTGCAGGGGATCCCCA+TGG | - | chr5.2:83766061-83766080 | None:intergenic | 60.0% | |
| CAGAGCATACTGGCGGTGCT+GGG | - | chr5.2:83766180-83766199 | None:intergenic | 60.0% | |
| CCTCCTTCTGGCCCAACAAG+AGG | - | chr5.2:83765639-83765658 | None:intergenic | 60.0% | |
| CCTCTTGTTGGGCCAGAAGG+AGG | + | chr5.2:83765636-83765655 | MS.gene65375:CDS | 60.0% | |
| TCAGAGCATACTGGCGGTGC+TGG | - | chr5.2:83766181-83766200 | None:intergenic | 60.0% | |
| ! | TAACGCCGTCTGGGGCCAAT+TGG | - | chr5.2:83764706-83764725 | None:intergenic | 60.0% |
| ! | TGGCGGTGCTGGGACAAGAT+TGG | - | chr5.2:83766170-83766189 | None:intergenic | 60.0% |
| ACGGCGGCAGGTCCCAAGAA+AGG | - | chr5.2:83765485-83765504 | None:intergenic | 65.0% | |
| CGGCGGCAGGTCCCAAGAAA+GGG | - | chr5.2:83765484-83765503 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 83764591 | 83766229 | 83764591 | ID=MS.gene65375 |
| chr5.2 | mRNA | 83764591 | 83766229 | 83764591 | ID=MS.gene65375.t1;Parent=MS.gene65375 |
| chr5.2 | exon | 83764591 | 83764593 | 83764591 | ID=MS.gene65375.t1.exon1;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83764591 | 83764593 | 83764591 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| chr5.2 | exon | 83764680 | 83764760 | 83764680 | ID=MS.gene65375.t1.exon2;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83764680 | 83764760 | 83764680 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| chr5.2 | exon | 83764870 | 83764962 | 83764870 | ID=MS.gene65375.t1.exon3;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83764870 | 83764962 | 83764870 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| chr5.2 | exon | 83764999 | 83765061 | 83764999 | ID=MS.gene65375.t1.exon4;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83764999 | 83765061 | 83764999 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| chr5.2 | exon | 83765603 | 83765727 | 83765603 | ID=MS.gene65375.t1.exon5;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83765603 | 83765727 | 83765603 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| chr5.2 | exon | 83766037 | 83766229 | 83766037 | ID=MS.gene65375.t1.exon6;Parent=MS.gene65375.t1 |
| chr5.2 | CDS | 83766037 | 83766229 | 83766037 | ID=cds.MS.gene65375.t1;Parent=MS.gene65375.t1 |
| Gene Sequence |
| Protein sequence |
