AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65695

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65695.t1 MTR_5g057670 96.250 160 6 0 28 187 32 191 1.21e-112 319
MS.gene65695.t1 MTR_5g057335 96.250 160 6 0 28 187 32 191 1.21e-112 319
MS.gene65695.t1 MTR_4g089100 49.600 125 63 0 41 165 40 164 1.24e-43 144
MS.gene65695.t1 MTR_1g109660 41.497 147 83 1 40 186 41 184 4.61e-37 127
MS.gene65695.t1 MTR_2g079830 48.062 129 67 0 40 168 40 168 2.01e-36 125
MS.gene65695.t1 MTR_1g109700 36.000 150 96 0 37 186 36 185 3.64e-30 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65695.t1 AT1G13380 71.875 160 42 1 28 187 32 188 4.49e-71 213
MS.gene65695.t1 AT4G27435 49.612 129 65 0 43 171 43 171 5.51e-43 142
MS.gene65695.t1 AT1G61065 48.413 126 65 0 40 165 39 164 4.19e-41 137
MS.gene65695.t1 AT3G15480 42.446 139 79 1 28 165 28 166 2.39e-39 132
MS.gene65695.t1 AT1G52910 44.615 130 70 2 38 165 37 166 1.02e-34 120
MS.gene65695.t1 AT1G68220 39.726 146 86 2 40 184 41 185 1.50e-33 118
MS.gene65695.t1 AT5G17210 31.707 123 81 2 42 163 45 165 4.24e-11 60.1

Find 50 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCCTATTTCTTCTTTC+AGG 0.118110 5.2:+48758135 MS.gene65695:CDS
ATAAATAATTCCCCGGTATT+TGG 0.197206 5.2:-48759014 None:intergenic
TTCAGGTGAATCACTGCTTA+TGG 0.206084 5.2:+48758152 MS.gene65695:CDS
GTCTGTCTGGGTAGTGAATC+AGG 0.340236 5.2:-48757537 None:intergenic
TTTGGGAGGCCTTTAACCCC+TGG 0.341537 5.2:+48758195 MS.gene65695:CDS
TCAGGTGAATCACTGCTTAT+GGG 0.342216 5.2:+48758153 MS.gene65695:CDS
ATTCACCTGAAAGAAGAAAT+AGG 0.343625 5.2:-48758140 None:intergenic
TCAGATGTCGCAACTGGTTA+TGG 0.349671 5.2:+48758105 MS.gene65695:CDS
AGGAAAGGCATCTTCATTAC+CGG 0.367227 5.2:+48759064 MS.gene65695:CDS
ACTTCTCCTGTGAAAGTTTG+AGG 0.369772 5.2:+48759044 MS.gene65695:CDS
AAAACAATGAAGGGTCTGTC+TGG 0.379918 5.2:-48757550 None:intergenic
CAATATGTTTCATTTGTTCC+TGG 0.388667 5.2:-48758072 None:intergenic
AGAAGAAAGAAAATATATAA+TGG 0.392892 5.2:-48758235 None:intergenic
TTGGGAGGCCTTTAACCCCT+GGG 0.398501 5.2:+48758196 MS.gene65695:CDS
CACTTTCTCAGAAGACCAAT+CGG 0.400256 5.2:+48759161 MS.gene65695:CDS
TCCCCGGTATTTGGTGTGAT+AGG 0.408796 5.2:-48759005 None:intergenic
GTGACAAAGTGCATGTGCTT+TGG 0.415268 5.2:+48758177 MS.gene65695:CDS
GCCTTTCCTCAAACTTTCAC+AGG 0.425540 5.2:-48759050 None:intergenic
TACAGTTCAGATGTCGCAAC+TGG 0.430054 5.2:+48758099 MS.gene65695:CDS
TGACAAAGTGCATGTGCTTT+GGG 0.430960 5.2:+48758178 MS.gene65695:CDS
TGTTCCTGGAGTTGTGTGAA+TGG 0.437125 5.2:-48758058 None:intergenic
CTTGAATATGTTACACCCTC+TGG 0.458695 5.2:+48757594 MS.gene65695:CDS
CAAGGTCAATCATGCATGTC+CGG 0.491279 5.2:-48759206 None:intergenic
ATGCCTATCACACCAAATAC+CGG 0.505251 5.2:+48759002 MS.gene65695:CDS
CGATTGGTCTTCTGAGAAAG+TGG 0.515883 5.2:-48759160 None:intergenic
CAGAGGGTGTAACATATTCA+AGG 0.521807 5.2:-48757593 None:intergenic
AATGATAACCCTGGATGAGA+AGG 0.533646 5.2:+48757512 None:intergenic
GCAGAATCATGCTTAATAGC+TGG 0.536563 5.2:+48758968 MS.gene65695:CDS
TGATTCTGCAACCAGAAAAG+TGG 0.540613 5.2:-48758954 None:intergenic
AATCGGGTTAGTTCCACGAT+TGG 0.543860 5.2:+48759178 MS.gene65695:CDS
TGCCTATCACACCAAATACC+GGG 0.552373 5.2:+48759003 MS.gene65695:CDS
TCCTGTGAAAGTTTGAGGAA+AGG 0.553407 5.2:+48759049 MS.gene65695:CDS
ACTTTCTCAGAAGACCAATC+GGG 0.557107 5.2:+48759162 MS.gene65695:CDS
AAACAATGAAGGGTCTGTCT+GGG 0.579357 5.2:-48757549 None:intergenic
TACAACGATGAAAATTGCTC+CGG 0.580379 5.2:-48759083 None:intergenic
GGAACCATTCACACAACTCC+AGG 0.583570 5.2:+48758054 MS.gene65695:CDS
AGTTCCACGATTGGAATGAC+CGG 0.588851 5.2:+48759187 MS.gene65695:CDS
TGGGAGGCCTTTAACCCCTG+GGG 0.589713 5.2:+48758197 MS.gene65695:CDS
GTCGCAACTGGTTATGGAGT+GGG 0.598364 5.2:+48758111 MS.gene65695:CDS
TAACATATTCAAGGAGGTGT+CGG 0.599766 5.2:-48757584 None:intergenic
AATCGTGGAACTAACCCGAT+TGG 0.605332 5.2:-48759176 None:intergenic
TCTGAGCATAAATAATTCCC+CGG 0.610710 5.2:-48759021 None:intergenic
GGGAGGCCTTTAACCCCTGG+GGG 0.642259 5.2:+48758198 MS.gene65695:CDS
CTTCTGAGAAAGTGGAGTAG+TGG 0.649249 5.2:-48759152 None:intergenic
ATGTCCGGTCATTCCAATCG+TGG 0.657041 5.2:-48759191 None:intergenic
CTACTACATGTACTTCACAA+AGG 0.667346 5.2:+48759126 MS.gene65695:CDS
GCCTATCACACCAAATACCG+GGG 0.675980 5.2:+48759004 MS.gene65695:CDS
CAAAGTGCATGTGCTTTGGG+AGG 0.685983 5.2:+48758181 MS.gene65695:CDS
TGTCGCAACTGGTTATGGAG+TGG 0.687826 5.2:+48758110 MS.gene65695:CDS
AGGGTGTAACATATTCAAGG+AGG 0.756431 5.2:-48757590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAGAAAGAAAATATATAA+TGG - chr5.2:48758238-48758257 None:intergenic 15.0%
!!! ATTATTGGAAATTTCATTTT+TGG + chr5.2:48758385-48758404 MS.gene65695:intron 15.0%
!!! TTATATATTTTCTTTCTTCT+TGG + chr5.2:48758238-48758257 MS.gene65695:CDS 15.0%
!! AAAACAAAAAACACATATAG+TGG - chr5.2:48758788-48758807 None:intergenic 20.0%
!! ACTAACAAAGAACATATTTA+TGG + chr5.2:48758598-48758617 MS.gene65695:intron 20.0%
!! CTTCTTAATTTACATTAACT+TGG + chr5.2:48758004-48758023 MS.gene65695:intron 20.0%
!! TCTATGCTTTAATATTTCAT+AGG + chr5.2:48757962-48757981 MS.gene65695:intron 20.0%
!!! AAATTCTGAAAAACAATGAA+GGG - chr5.2:48757562-48757581 None:intergenic 20.0%
!!! TCATCTTTTCTTGATTTATT+TGG + chr5.2:48758410-48758429 MS.gene65695:intron 20.0%
!!! TTGTTTAAGGTATTTTATGA+GGG + chr5.2:48757894-48757913 MS.gene65695:intron 20.0%
!!! TTTCCAATAATTTTTTTCAC+TGG - chr5.2:48758376-48758395 None:intergenic 20.0%
! AGAAAACATGCATAATACAA+AGG - chr5.2:48757681-48757700 None:intergenic 25.0%
! ATGAAACAATGATTCCTATT+TGG - chr5.2:48758764-48758783 None:intergenic 25.0%
! ATGTAAAAGAATTGGTAGAA+GGG - chr5.2:48757710-48757729 None:intergenic 25.0%
! CAAATTTATTGTGATCTATG+AGG + chr5.2:48758857-48758876 MS.gene65695:intron 25.0%
! TATGGAGTAAAACTAGAATT+AGG + chr5.2:48757919-48757938 MS.gene65695:intron 25.0%
! TATGTCAAAAAGAAACATAG+CGG + chr5.2:48757849-48757868 MS.gene65695:intron 25.0%
! TCTTGATTTATTTGGTTGAT+TGG + chr5.2:48758418-48758437 MS.gene65695:intron 25.0%
! TGTCCAGTGAAAAAAATTAT+TGG + chr5.2:48758370-48758389 MS.gene65695:intron 25.0%
! TTTGGTTAGTATAACCAAAT+AGG + chr5.2:48758747-48758766 MS.gene65695:intron 25.0%
!! CTGTCAATTTTATCTTCATA+GGG + chr5.2:48757822-48757841 MS.gene65695:intron 25.0%
!! GAAATTCTGAAAAACAATGA+AGG - chr5.2:48757563-48757582 None:intergenic 25.0%
!! TTTCTTTTTCCTTTTTTCCA+GGG + chr5.2:48758931-48758950 MS.gene65695:intron 25.0%
!! TTTTCTTTTTCCTTTTTTCC+AGG + chr5.2:48758930-48758949 MS.gene65695:intron 25.0%
!!! GTTGTTTAAGGTATTTTATG+AGG + chr5.2:48757893-48757912 MS.gene65695:intron 25.0%
!!! TAGATTGATTGTGTTGTTTA+AGG + chr5.2:48757881-48757900 MS.gene65695:intron 25.0%
AAATATTTGGAAATGTGAGG+AGG - chr5.2:48757633-48757652 None:intergenic 30.0%
AAATGAGTAAGACACACTTT+GGG - chr5.2:48758500-48758519 None:intergenic 30.0%
AACATGCATAATACAAAGGA+CGG - chr5.2:48757677-48757696 None:intergenic 30.0%
AAGGGAAAAAAGAATATGAG+AGG - chr5.2:48757776-48757795 None:intergenic 30.0%
AATATTTGGAAATGTGAGGA+GGG - chr5.2:48757632-48757651 None:intergenic 30.0%
AGGAAAGTGAAAGAGAAAAA+CGG - chr5.2:48757756-48757775 None:intergenic 30.0%
AGTAAAACTAGAATTAGGCA+TGG + chr5.2:48757924-48757943 MS.gene65695:intron 30.0%
ATAAATAATTCCCCGGTATT+TGG - chr5.2:48759017-48759036 None:intergenic 30.0%
ATGTCAAAAAGAAACATAGC+GGG + chr5.2:48757850-48757869 MS.gene65695:intron 30.0%
ATGTTCTTTGTTAGTCAACT+TGG - chr5.2:48758593-48758612 None:intergenic 30.0%
ATTCACCTGAAAGAAGAAAT+AGG - chr5.2:48758143-48758162 None:intergenic 30.0%
CAATATGTTTCATTTGTTCC+TGG - chr5.2:48758075-48758094 None:intergenic 30.0%
CATGTAAAAGAATTGGTAGA+AGG - chr5.2:48757711-48757730 None:intergenic 30.0%
CCTATGAAGATAAAATTGAC+AGG - chr5.2:48757824-48757843 None:intergenic 30.0%
GAGAAATATTTGGAAATGTG+AGG - chr5.2:48757636-48757655 None:intergenic 30.0%
TGTAAAAGAATTGGTAGAAG+GGG - chr5.2:48757709-48757728 None:intergenic 30.0%
! AATTTTCATCGTTGTAACGA+TGG + chr5.2:48759090-48759109 MS.gene65695:CDS 30.0%
! CCTGTCAATTTTATCTTCAT+AGG + chr5.2:48757821-48757840 MS.gene65695:intron 30.0%
! CTACCAATTCTTTTACATGA+AGG + chr5.2:48757712-48757731 MS.gene65695:intron 30.0%
! TCTTCACTAGTGAATCATTT+TGG + chr5.2:48758890-48758909 MS.gene65695:intron 30.0%
! TTTTATCCGTTAATTGTGTG+AGG - chr5.2:48758669-48758688 None:intergenic 30.0%
!!! ACTCATTTTGGCTATAGATT+TGG + chr5.2:48758729-48758748 MS.gene65695:intron 30.0%
!!! TTTTTGTTTTGCTACACTGA+AGG - chr5.2:48758472-48758491 None:intergenic 30.0%
AACAAGGCAATGGAGTAAAA+GGG - chr5.2:48757794-48757813 None:intergenic 35.0%
AAGTGTGTCTTACTCATTTC+AGG + chr5.2:48758501-48758520 MS.gene65695:intron 35.0%
ACAATGCCTCACACAATTAA+CGG + chr5.2:48758660-48758679 MS.gene65695:intron 35.0%
AGGCCTTCATGTAAAAGAAT+TGG - chr5.2:48757718-48757737 None:intergenic 35.0%
AGTGTGTCTTACTCATTTCA+GGG + chr5.2:48758502-48758521 MS.gene65695:intron 35.0%
CTACTACATGTACTTCACAA+AGG + chr5.2:48759126-48759145 MS.gene65695:CDS 35.0%
CTATAGCCAAAATGAGTGAA+GGG - chr5.2:48758726-48758745 None:intergenic 35.0%
GAAATGAGTAAGACACACTT+TGG - chr5.2:48758501-48758520 None:intergenic 35.0%
GGAAAGTGAAAGAGAAAAAC+GGG - chr5.2:48757755-48757774 None:intergenic 35.0%
TAACAAGGCAATGGAGTAAA+AGG - chr5.2:48757795-48757814 None:intergenic 35.0%
TACAACGATGAAAATTGCTC+CGG - chr5.2:48759086-48759105 None:intergenic 35.0%
TACTCATTTCAGGGTTCAAA+CGG + chr5.2:48758511-48758530 MS.gene65695:intron 35.0%
TCTATAGCCAAAATGAGTGA+AGG - chr5.2:48758727-48758746 None:intergenic 35.0%
TCTGAGCATAAATAATTCCC+CGG - chr5.2:48759024-48759043 None:intergenic 35.0%
TTTATTCACACGAAGCTTCT+TGG + chr5.2:48758806-48758825 MS.gene65695:intron 35.0%
! ACTCCATTGCCTTGTTAATT+GGG + chr5.2:48757798-48757817 MS.gene65695:intron 35.0%
! GCTTTCCTATTTCTTCTTTC+AGG + chr5.2:48758135-48758154 MS.gene65695:CDS 35.0%
! TAACATATTCAAGGAGGTGT+CGG - chr5.2:48757587-48757606 None:intergenic 35.0%
! TACTCCATTGCCTTGTTAAT+TGG + chr5.2:48757797-48757816 MS.gene65695:intron 35.0%
!! AGGTATTTTATGAGGGCATA+TGG + chr5.2:48757901-48757920 MS.gene65695:intron 35.0%
!! GGTTGATTGGTTTAAGTATG+TGG + chr5.2:48758431-48758450 MS.gene65695:intron 35.0%
AAAACAATGAAGGGTCTGTC+TGG - chr5.2:48757553-48757572 None:intergenic 40.0%
AAACAATGAAGGGTCTGTCT+GGG - chr5.2:48757552-48757571 None:intergenic 40.0%
ACTTCTCCTGTGAAAGTTTG+AGG + chr5.2:48759044-48759063 MS.gene65695:CDS 40.0%
ACTTTCTCAGAAGACCAATC+GGG + chr5.2:48759162-48759181 MS.gene65695:CDS 40.0%
AGAGCCAAACTAACGAACAA+AGG + chr5.2:48758554-48758573 MS.gene65695:intron 40.0%
AGGGTGTAACATATTCAAGG+AGG - chr5.2:48757593-48757612 None:intergenic 40.0%
ATGCATAATACAAAGGACGG+TGG - chr5.2:48757674-48757693 None:intergenic 40.0%
ATGCCTATCACACCAAATAC+CGG + chr5.2:48759002-48759021 MS.gene65695:CDS 40.0%
ATTGACAGGCCCAATTAACA+AGG - chr5.2:48757810-48757829 None:intergenic 40.0%
CACTTTCTCAGAAGACCAAT+CGG + chr5.2:48759161-48759180 MS.gene65695:CDS 40.0%
CTTGAATATGTTACACCCTC+TGG + chr5.2:48757594-48757613 MS.gene65695:CDS 40.0%
GCAGAATCATGCTTAATAGC+TGG + chr5.2:48758968-48758987 MS.gene65695:CDS 40.0%
GGGGATTGGAGAGAAATATT+TGG - chr5.2:48757646-48757665 None:intergenic 40.0%
GTGTCCTTTGTTCGTTAGTT+TGG - chr5.2:48758561-48758580 None:intergenic 40.0%
TCAGGTGAATCACTGCTTAT+GGG + chr5.2:48758153-48758172 MS.gene65695:CDS 40.0%
TCCTGTGAAAGTTTGAGGAA+AGG + chr5.2:48759049-48759068 MS.gene65695:CDS 40.0%
TGACAAAGTGCATGTGCTTT+GGG + chr5.2:48758178-48758197 MS.gene65695:CDS 40.0%
TGATTCTGCAACCAGAAAAG+TGG - chr5.2:48758957-48758976 None:intergenic 40.0%
TTCAGGTGAATCACTGCTTA+TGG + chr5.2:48758152-48758171 MS.gene65695:CDS 40.0%
! ACACAACCCTTCACTCATTT+TGG + chr5.2:48758717-48758736 MS.gene65695:intron 40.0%
! CAGAGGGTGTAACATATTCA+AGG - chr5.2:48757596-48757615 None:intergenic 40.0%
!! AGGAAAGGCATCTTCATTAC+CGG + chr5.2:48759064-48759083 MS.gene65695:CDS 40.0%
!! CATAGGCTTTGAAGTACTAG+TGG + chr5.2:48757979-48757998 MS.gene65695:intron 40.0%
AATACAAAGGACGGTGGCAT+AGG - chr5.2:48757668-48757687 None:intergenic 45.0%
AATCGTGGAACTAACCCGAT+TGG - chr5.2:48759179-48759198 None:intergenic 45.0%
AGGCCCAATTAACAAGGCAA+TGG - chr5.2:48757804-48757823 None:intergenic 45.0%
AGGGAGAGTAAGTATACCAG+AGG - chr5.2:48757613-48757632 None:intergenic 45.0%
AGTTCCACGATTGGAATGAC+CGG + chr5.2:48759187-48759206 MS.gene65695:CDS 45.0%
ATACAAAGGACGGTGGCATA+GGG - chr5.2:48757667-48757686 None:intergenic 45.0%
CTCTTTGCTCTTGCTTCACA+GGG + chr5.2:48758033-48758052 MS.gene65695:intron 45.0%
GAAAAGTGGCCCTGGAAAAA+AGG - chr5.2:48758943-48758962 None:intergenic 45.0%
GAAGCAAGAGCAAAGAGAGA+AGG - chr5.2:48758030-48758049 None:intergenic 45.0%
GCCTTTCCTCAAACTTTCAC+AGG - chr5.2:48759053-48759072 None:intergenic 45.0%
GGGAGAGTAAGTATACCAGA+GGG - chr5.2:48757612-48757631 None:intergenic 45.0%
GTGACAAAGTGCATGTGCTT+TGG + chr5.2:48758177-48758196 MS.gene65695:CDS 45.0%
TACAGTTCAGATGTCGCAAC+TGG + chr5.2:48758099-48758118 MS.gene65695:CDS 45.0%
TCAGATGTCGCAACTGGTTA+TGG + chr5.2:48758105-48758124 MS.gene65695:CDS 45.0%
TCTCTTTGCTCTTGCTTCAC+AGG + chr5.2:48758032-48758051 MS.gene65695:intron 45.0%
TGCCTATCACACCAAATACC+GGG + chr5.2:48759003-48759022 MS.gene65695:CDS 45.0%
TGTTCCTGGAGTTGTGTGAA+TGG - chr5.2:48758061-48758080 None:intergenic 45.0%
TTCATCTGAGCACGCTGATA+CGG + chr5.2:48758296-48758315 MS.gene65695:intron 45.0%
! CTTCTGAGAAAGTGGAGTAG+TGG - chr5.2:48759155-48759174 None:intergenic 45.0%
! CTTTTACATGAAGGCCTCGA+TGG + chr5.2:48757721-48757740 MS.gene65695:intron 45.0%
!! AATCGGGTTAGTTCCACGAT+TGG + chr5.2:48759178-48759197 MS.gene65695:CDS 45.0%
!! CGATTGGTCTTCTGAGAAAG+TGG - chr5.2:48759163-48759182 None:intergenic 45.0%
!! CGTTAGTTTGGCTCTCGAAT+GGG - chr5.2:48758549-48758568 None:intergenic 45.0%
!! TCGTTAGTTTGGCTCTCGAA+TGG - chr5.2:48758550-48758569 None:intergenic 45.0%
!!! TTTTTCCAGGGCCACTTTTC+TGG + chr5.2:48758943-48758962 MS.gene65695:intron 45.0%
ATGTCCGGTCATTCCAATCG+TGG - chr5.2:48759194-48759213 None:intergenic 50.0%
GCCTATCACACCAAATACCG+GGG + chr5.2:48759004-48759023 MS.gene65695:CDS 50.0%
GGAACCATTCACACAACTCC+AGG + chr5.2:48758054-48758073 MS.gene65695:CDS 50.0%
GTCGCAACTGGTTATGGAGT+GGG + chr5.2:48758111-48758130 MS.gene65695:CDS 50.0%
GTCTGTCTGGGTAGTGAATC+AGG - chr5.2:48757540-48757559 None:intergenic 50.0%
TACAAAGGACGGTGGCATAG+GGG - chr5.2:48757666-48757685 None:intergenic 50.0%
TGTCGCAACTGGTTATGGAG+TGG + chr5.2:48758110-48758129 MS.gene65695:CDS 50.0%
! CAAAGTGCATGTGCTTTGGG+AGG + chr5.2:48758181-48758200 MS.gene65695:CDS 50.0%
!! TCCCCGGTATTTGGTGTGAT+AGG - chr5.2:48759008-48759027 None:intergenic 50.0%
ACAAAGGACGGTGGCATAGG+GGG - chr5.2:48757665-48757684 None:intergenic 55.0%
ACCAAGCTCGATTTCCCCCA+GGG - chr5.2:48758215-48758234 None:intergenic 55.0%
CGATTTCCCCCAGGGGTTAA+AGG - chr5.2:48758207-48758226 None:intergenic 55.0%
TGCAACCAGAAAAGTGGCCC+TGG - chr5.2:48758951-48758970 None:intergenic 55.0%
TTGGGAGGCCTTTAACCCCT+GGG + chr5.2:48758196-48758215 MS.gene65695:CDS 55.0%
TTTGGGAGGCCTTTAACCCC+TGG + chr5.2:48758195-48758214 MS.gene65695:CDS 55.0%
! AACGGGCTTGAAAGCCATCG+AGG - chr5.2:48757738-48757757 None:intergenic 55.0%
CCAAGCTCGATTTCCCCCAG+GGG - chr5.2:48758214-48758233 None:intergenic 60.0%
GACCAAGCTCGATTTCCCCC+AGG - chr5.2:48758216-48758235 None:intergenic 60.0%
TGGGAGGCCTTTAACCCCTG+GGG + chr5.2:48758197-48758216 MS.gene65695:CDS 60.0%
CCCCTGGGGGAAATCGAGCT+TGG + chr5.2:48758211-48758230 MS.gene65695:CDS 65.0%
GGACGGTGGCATAGGGGGAT+TGG - chr5.2:48757660-48757679 None:intergenic 65.0%
GGGAGGCCTTTAACCCCTGG+GGG + chr5.2:48758198-48758217 MS.gene65695:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 48757526 48759219 48757526 ID=MS.gene65695
chr5.2 mRNA 48757526 48759219 48757526 ID=MS.gene65695.t1;Parent=MS.gene65695
chr5.2 exon 48757526 48757615 48757526 ID=MS.gene65695.t1.exon1;Parent=MS.gene65695.t1
chr5.2 CDS 48757526 48757615 48757526 ID=cds.MS.gene65695.t1;Parent=MS.gene65695.t1
chr5.2 exon 48758054 48758259 48758054 ID=MS.gene65695.t1.exon2;Parent=MS.gene65695.t1
chr5.2 CDS 48758054 48758259 48758054 ID=cds.MS.gene65695.t1;Parent=MS.gene65695.t1
chr5.2 exon 48758952 48759219 48758952 ID=MS.gene65695.t1.exon3;Parent=MS.gene65695.t1
chr5.2 CDS 48758952 48759219 48758952 ID=cds.MS.gene65695.t1;Parent=MS.gene65695.t1
Gene Sequence

>MS.gene65695

ATGAGAAGGAACCTGATTCACTACCCAGACAGACCCTTCATTGTTTTTCAGAATTTCACCGACACCTCCTTGAATATGTTACACCCTCTGGTATACTTACTCTCCCTCCTCACATTTCCAAATATTTCTCTCCAATCCCCCTATGCCACCGTCCTTTGTATTATGCATGTTTTCTCTCTTCCCCTTCTACCAATTCTTTTACATGAAGGCCTCGATGGCTTTCAAGCCCGTTTTTCTCTTTCACTTTCCTCTCATATTCTTTTTTCCCTTTTACTCCATTGCCTTGTTAATTGGGCCTGTCAATTTTATCTTCATAGGGAAACTATGTCAAAAAGAAACATAGCGGGAAGATGATTAGATTGATTGTGTTGTTTAAGGTATTTTATGAGGGCATATGGAGTAAAACTAGAATTAGGCATGGATTTTGTCTGATATGTCTATGCTTTAATATTTCATAGGCTTTGAAGTACTAGTGGTTCTTCTTAATTTACATTAACTTGGCCTTCTCTCTTTGCTCTTGCTTCACAGGGAACCATTCACACAACTCCAGGAACAAATGAAACATATTGCGTTTACAGTTCAGATGTCGCAACTGGTTATGGAGTGGGTGCTTTCCTATTTCTTCTTTCAGGTGAATCACTGCTTATGGGTGTGACAAAGTGCATGTGCTTTGGGAGGCCTTTAACCCCTGGGGGAAATCGAGCTTGGTCCATTATATATTTTCTTTCTTCTTGGTAAGAATTCTGAGTTCATTATTTTACTAATTCTATTTCATCTGAGCACGCTGATACGGTGATATTATACTTGTTAAAACTATTGTGTTAAAAGTGACATGTTCTTATAATGTCCAGTGAAAAAAATTATTGGAAATTTCATTTTTGGCATCATCTTTTCTTGATTTATTTGGTTGATTGGTTTAAGTATGTGGTGCTTTCAATATAGTCCTTCAGTGTAGCAAAACAAAAAAAATTCCCAAAGTGTGTCTTACTCATTTCAGGGTTCAAACGGACTAGTAGAAGACCCATTCGAGAGCCAAACTAACGAACAAAGGACACATTAGAGAACCAAGTTGACTAACAAAGAACATATTTATGGATATTTATCATAGTTTTAATACATTTAGTGACTATAGAGACAATGCCTCACACAATTAACGGATAAAATGAGTTTTTATTTGTTTATTTATACACAACACAACCCTTCACTCATTTTGGCTATAGATTTGGTTAGTATAACCAAATAGGAATCATTGTTTCATTCCACTATATGTGTTTTTTGTTTTTATTCACACGAAGCTTCTTGGTTTTACGAAAATGTTGCTCATGAGACATCAAATTTATTGTGATCTATGAGGTCATTCATTCTCTTCACTAGTGAATCATTTTGGTTTCAATTGCTATTTTTTTTTCTTTTTCCTTTTTTCCAGGGCCACTTTTCTGGTTGCAGAATCATGCTTAATAGCTGGTGCAAAAAAGAATGCCTATCACACCAAATACCGGGGAATTATTTATGCTCAGAACTTCTCCTGTGAAAGTTTGAGGAAAGGCATCTTCATTACCGGAGCAATTTTCATCGTTGTAACGATGGTTCTTAACGTATACTACTACATGTACTTCACAAAGGCAACCACTACTCCACTTTCTCAGAAGACCAATCGGGTTAGTTCCACGATTGGAATGACCGGACATGCATGA
Protein sequence

>MS.gene65695.t1

MRRNLIHYPDRPFIVFQNFTDTSLNMLHPLGTIHTTPGTNETYCVYSSDVATGYGVGAFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWATFLVAESCLIAGAKKNAYHTKYRGIIYAQNFSCESLRKGIFITGAIFIVVTMVLNVYYYMYFTKATTTPLSQKTNRVSSTIGMTGHA