Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65734.t1 | XP_003598516.1 | 59.3 | 241 | 3 | 1 | 23 | 168 | 89 | 329 | 1.60E-68 | 268.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65734.t1 | Q94CK9 | 53.2 | 79 | 37 | 0 | 76 | 154 | 220 | 298 | 8.6e-18 | 91.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65734.t1 | G7J0K6 | 59.3 | 241 | 3 | 1 | 23 | 168 | 89 | 329 | 1.2e-68 | 268.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene65734.t1 | TF | SRS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051648 | MS.gene65734 | 0.82445 | 8.02E-54 | -1.69E-46 |
| MS.gene053536 | MS.gene65734 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene053538 | MS.gene65734 | 0.807354 | 5.27E-50 | -1.69E-46 |
| MS.gene054999 | MS.gene65734 | 0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene65734 | 0.821229 | 4.51E-53 | -1.69E-46 |
| MS.gene059778 | MS.gene65734 | 0.803936 | 2.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65734.t1 | MTR_3g014660 | 97.938 | 97 | 2 | 0 | 72 | 168 | 233 | 329 | 4.40e-65 | 202 |
| MS.gene65734.t1 | MTR_3g014660 | 68.750 | 112 | 25 | 2 | 1 | 112 | 69 | 170 | 2.35e-32 | 118 |
| MS.gene65734.t1 | MTR_8g039110 | 75.758 | 99 | 20 | 4 | 72 | 167 | 229 | 326 | 1.48e-41 | 142 |
| MS.gene65734.t1 | MTR_5g089750 | 62.319 | 69 | 26 | 0 | 72 | 140 | 348 | 416 | 1.56e-24 | 99.0 |
| MS.gene65734.t1 | MTR_5g021130 | 51.020 | 49 | 24 | 0 | 79 | 127 | 205 | 253 | 3.63e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65734.t1 | AT5G12330 | 52.747 | 91 | 42 | 1 | 74 | 163 | 218 | 308 | 6.73e-23 | 92.8 |
| MS.gene65734.t1 | AT5G12330 | 52.747 | 91 | 42 | 1 | 74 | 163 | 218 | 308 | 6.73e-23 | 92.8 |
| MS.gene65734.t1 | AT5G12330 | 52.747 | 91 | 42 | 1 | 74 | 163 | 305 | 395 | 1.33e-22 | 93.2 |
| MS.gene65734.t1 | AT3G54430 | 58.209 | 67 | 27 | 1 | 72 | 137 | 116 | 182 | 6.33e-20 | 82.4 |
| MS.gene65734.t1 | AT1G19790 | 47.541 | 61 | 31 | 1 | 66 | 125 | 209 | 269 | 1.24e-11 | 62.0 |
| MS.gene65734.t1 | AT1G19790 | 47.541 | 61 | 31 | 1 | 66 | 125 | 209 | 269 | 1.24e-11 | 62.0 |
| MS.gene65734.t1 | AT3G51060 | 55.556 | 45 | 20 | 0 | 79 | 123 | 238 | 282 | 2.77e-11 | 61.2 |
Find 34 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGGGTAAACATTATTATT+TGG | 0.173024 | 3.2:+7548598 | None:intergenic |
| TTTGGAAGATTCACTACTTC+AGG | 0.330560 | 3.2:+7550161 | None:intergenic |
| TTCATGCACCAGCTGTATTC+AGG | 0.332427 | 3.2:-7548822 | MS.gene65734:CDS |
| CTCTATGATCATGGTGTTGA+TGG | 0.354571 | 3.2:-7548709 | MS.gene65734:CDS |
| AGAAGAGAATCATGGCAAAA+TGG | 0.391361 | 3.2:-7550120 | MS.gene65734:CDS |
| TGCCAATAGCAGTTACTCTA+TGG | 0.398017 | 3.2:+7548797 | None:intergenic |
| TTGTGTTTCAGAACTTCAAT+TGG | 0.409173 | 3.2:-7548671 | MS.gene65734:CDS |
| TTGGCCACAGTTCATATTAG+TGG | 0.413737 | 3.2:-7548751 | MS.gene65734:CDS |
| TGAAGATGAATTTGCTTACT+TGG | 0.421514 | 3.2:-7548770 | MS.gene65734:CDS |
| AAAGGGTTTCTCTATGATCA+TGG | 0.441459 | 3.2:-7548718 | MS.gene65734:CDS |
| CATGGCTAGCTAGCAGAAGC+AGG | 0.449543 | 3.2:+7548580 | None:intergenic |
| TGCCATAGAGTAACTGCTAT+TGG | 0.452645 | 3.2:-7548799 | MS.gene65734:CDS |
| GGTGAATGTTCTTCTGCAAT+TGG | 0.456180 | 3.2:-7548625 | MS.gene65734:CDS |
| GGTTTCAAAGAGGGTTTACC+AGG | 0.457703 | 3.2:-7548850 | MS.gene65734:CDS |
| TCATGGCAAAATGGCTATGA+TGG | 0.462755 | 3.2:-7550111 | MS.gene65734:CDS |
| AGTTCTGAAACACAAGGCAT+TGG | 0.476027 | 3.2:+7548679 | None:intergenic |
| AGTGAAGAAAATGGTGTGTA+TGG | 0.483753 | 3.2:-7550086 | MS.gene65734:CDS |
| TGTGTTTCAGAACTTCAATT+GGG | 0.498389 | 3.2:-7548670 | MS.gene65734:CDS |
| CTACTTCAGGACACATCCTA+AGG | 0.507824 | 3.2:+7550174 | None:intergenic |
| TATAGAGTTTGTCAAGATTG+TGG | 0.512497 | 3.2:-7550056 | MS.gene65734:intron |
| AATAATTGTAGTGGAAAGAA+TGG | 0.512653 | 3.2:-7548646 | MS.gene65734:CDS |
| ATGATGGAGAGTGAAGAAAA+TGG | 0.542008 | 3.2:-7550095 | MS.gene65734:CDS |
| GCAGATGCAGGTTTCAAAGA+GGG | 0.558109 | 3.2:-7548859 | MS.gene65734:intron |
| CTATGGCACCTGAATACAGC+TGG | 0.563710 | 3.2:+7548814 | None:intergenic |
| ATCACTGAAGAAGAGAATCA+TGG | 0.572196 | 3.2:-7550128 | MS.gene65734:CDS |
| AGAGTAACTGCTATTGGCAA+TGG | 0.579028 | 3.2:-7548793 | MS.gene65734:CDS |
| CAATTGGGAAATAATTGTAG+TGG | 0.580003 | 3.2:-7548655 | MS.gene65734:CDS |
| AGAGAAACCCTTTGAAAACA+TGG | 0.595856 | 3.2:+7548728 | None:intergenic |
| TCTATGATCATGGTGTTGAT+GGG | 0.608318 | 3.2:-7548708 | MS.gene65734:CDS |
| TGCAGATGCAGGTTTCAAAG+AGG | 0.617800 | 3.2:-7548860 | MS.gene65734:intron |
| ATGGCTAGCTAGCAGAAGCA+GGG | 0.656680 | 3.2:+7548581 | None:intergenic |
| GCTGGTGCATGAACATGACC+TGG | 0.691114 | 3.2:+7548832 | None:intergenic |
| ATGGCCACTAATATGAACTG+TGG | 0.704516 | 3.2:+7548747 | None:intergenic |
| AATTGAAGTTCTGAAACACA+AGG | 0.729820 | 3.2:+7548673 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAAAAAAAAAAAAAA+AGG | + | chr3.2:7549434-7549453 | None:intergenic | 0.0% |
| !! | GATAATAAATTACATCAATT+TGG | + | chr3.2:7549839-7549858 | None:intergenic | 15.0% |
| !! | TGAAATTATTATAACTGAAA+AGG | - | chr3.2:7549924-7549943 | MS.gene65734:intron | 15.0% |
| !! | TTTAAATGTTTAGATTGAAA+AGG | - | chr3.2:7549142-7549161 | MS.gene65734:intron | 15.0% |
| !! | AAGTTAAAACATGAATTGTT+TGG | + | chr3.2:7549565-7549584 | None:intergenic | 20.0% |
| !! | ACTCTTATCATATCAATTTA+TGG | + | chr3.2:7549879-7549898 | None:intergenic | 20.0% |
| !! | TCAGTTATAATAATTTCATG+TGG | + | chr3.2:7549922-7549941 | None:intergenic | 20.0% |
| !!! | AACATTATTTTGTTCATTGA+TGG | - | chr3.2:7549485-7549504 | MS.gene65734:intron | 20.0% |
| !!! | CAAAAATTGTTATTGTTACT+AGG | + | chr3.2:7548636-7548655 | None:intergenic | 20.0% |
| !!! | CTAGTAACAATAACAATTTT+TGG | - | chr3.2:7548634-7548653 | MS.gene65734:CDS | 20.0% |
| ! | AAGAGACAAAAAGGTTTATT+AGG | - | chr3.2:7548984-7549003 | MS.gene65734:intron | 25.0% |
| ! | AATGAACAAAATAATGTTCC+CGG | + | chr3.2:7549483-7549502 | None:intergenic | 25.0% |
| ! | AGAGACAAAAAGGTTTATTA+GGG | - | chr3.2:7548985-7549004 | MS.gene65734:intron | 25.0% |
| ! | ATATTAGTATTGTATACACC+GGG | - | chr3.2:7549462-7549481 | MS.gene65734:intron | 25.0% |
| ! | CATATTAGTATTGTATACAC+CGG | - | chr3.2:7549461-7549480 | MS.gene65734:intron | 25.0% |
| ! | GTTTAGATTGAAAAGGAATT+TGG | - | chr3.2:7549149-7549168 | MS.gene65734:intron | 25.0% |
| !! | AATAATTGTAGTGGAAAGAA+TGG | - | chr3.2:7550187-7550206 | MS.gene65734:CDS | 25.0% |
| !!! | ATAACAATTTTTGGAACCTT+AGG | - | chr3.2:7548643-7548662 | MS.gene65734:CDS | 25.0% |
| !!! | GTCAATTTGTCTTGTTTTAT+AGG | - | chr3.2:7549721-7549740 | MS.gene65734:intron | 25.0% |
| !!! | TATTTTGTTCATTGATGGAT+TGG | - | chr3.2:7549490-7549509 | MS.gene65734:intron | 25.0% |
| ACACATAGACTATACATGTT+TGG | + | chr3.2:7549235-7549254 | None:intergenic | 30.0% | |
| ATTGTGTGTTTAGAAGATGT+AGG | - | chr3.2:7548817-7548836 | MS.gene65734:CDS | 30.0% | |
| CAATTGGGAAATAATTGTAG+TGG | - | chr3.2:7550178-7550197 | MS.gene65734:CDS | 30.0% | |
| GCAGGGTAAACATTATTATT+TGG | + | chr3.2:7550238-7550257 | None:intergenic | 30.0% | |
| GGTTAATGGTCAAATATAGT+AGG | + | chr3.2:7549384-7549403 | None:intergenic | 30.0% | |
| GTAGTGAATCTTCCAAAAAA+AGG | - | chr3.2:7548678-7548697 | MS.gene65734:CDS | 30.0% | |
| TATAGAGTTTGTCAAGATTG+TGG | - | chr3.2:7548777-7548796 | MS.gene65734:CDS | 30.0% | |
| TGTGTTTCAGAACTTCAATT+GGG | - | chr3.2:7550163-7550182 | MS.gene65734:CDS | 30.0% | |
| TTGTCAAGATTGTGGTAATA+GGG | - | chr3.2:7548785-7548804 | MS.gene65734:CDS | 30.0% | |
| TTGTGTTTCAGAACTTCAAT+TGG | - | chr3.2:7550162-7550181 | MS.gene65734:CDS | 30.0% | |
| TTTGTCAAGATTGTGGTAAT+AGG | - | chr3.2:7548784-7548803 | MS.gene65734:CDS | 30.0% | |
| ! | GAGTAATTTGTGTGTAATTG+AGG | - | chr3.2:7549895-7549914 | MS.gene65734:intron | 30.0% |
| ! | TAGTATTTTCTCCTTCATCA+GGG | - | chr3.2:7549771-7549790 | MS.gene65734:intron | 30.0% |
| ! | TGAAGATGAATTTGCTTACT+TGG | - | chr3.2:7550063-7550082 | MS.gene65734:CDS | 30.0% |
| ! | TTAGTATTTTCTCCTTCATC+AGG | - | chr3.2:7549770-7549789 | MS.gene65734:intron | 30.0% |
| !! | AAAAGTAAGTGAAAGTACCT+TGG | + | chr3.2:7549094-7549113 | None:intergenic | 30.0% |
| !! | AATTGAAGTTCTGAAACACA+AGG | + | chr3.2:7550163-7550182 | None:intergenic | 30.0% |
| !! | GTTTTGAGCTAAGGTTATAA+AGG | + | chr3.2:7549810-7549829 | None:intergenic | 30.0% |
| !! | TCTTGAACTTCATTGTTTTG+AGG | + | chr3.2:7548609-7548628 | None:intergenic | 30.0% |
| !!! | CTGCTTTTTGAAAATCAAGT+GGG | - | chr3.2:7549308-7549327 | MS.gene65734:intron | 30.0% |
| AAAGGGTTTCTCTATGATCA+TGG | - | chr3.2:7550115-7550134 | MS.gene65734:CDS | 35.0% | |
| AGAAGAGAATCATGGCAAAA+TGG | - | chr3.2:7548713-7548732 | MS.gene65734:CDS | 35.0% | |
| AGTGAAGAAAATGGTGTGTA+TGG | - | chr3.2:7548747-7548766 | MS.gene65734:CDS | 35.0% | |
| ATCACTGAAGAAGAGAATCA+TGG | - | chr3.2:7548705-7548724 | MS.gene65734:CDS | 35.0% | |
| CATTTATGCAATCATGCTGT+TGG | - | chr3.2:7549516-7549535 | MS.gene65734:intron | 35.0% | |
| GTATAGTCTATGTGTATGTC+TGG | - | chr3.2:7549240-7549259 | MS.gene65734:intron | 35.0% | |
| TTTGGAAGATTCACTACTTC+AGG | + | chr3.2:7548675-7548694 | None:intergenic | 35.0% | |
| ! | AGAGAAACCCTTTGAAAACA+TGG | + | chr3.2:7550108-7550127 | None:intergenic | 35.0% |
| ! | ATGATGGAGAGTGAAGAAAA+TGG | - | chr3.2:7548738-7548757 | MS.gene65734:CDS | 35.0% |
| ! | ATTAGTGGCCATGTTTTCAA+AGG | - | chr3.2:7550097-7550116 | MS.gene65734:CDS | 35.0% |
| ! | CCACTTGATTTTCAAAAAGC+AGG | + | chr3.2:7549310-7549329 | None:intergenic | 35.0% |
| ! | TCTGGTGTTAAGAGACAAAA+AGG | - | chr3.2:7548975-7548994 | MS.gene65734:intron | 35.0% |
| ! | TTAGTGGCCATGTTTTCAAA+GGG | - | chr3.2:7550098-7550117 | MS.gene65734:CDS | 35.0% |
| !! | AAGATGTAGGACTTGTTGTA+AGG | - | chr3.2:7548830-7548849 | MS.gene65734:CDS | 35.0% |
| !! | AGATGTAGGACTTGTTGTAA+GGG | - | chr3.2:7548831-7548850 | MS.gene65734:CDS | 35.0% |
| !! | GTACTCATTTGAAGAGTACT+TGG | - | chr3.2:7548871-7548890 | MS.gene65734:intron | 35.0% |
| !! | TCTATGATCATGGTGTTGAT+GGG | - | chr3.2:7550125-7550144 | MS.gene65734:CDS | 35.0% |
| !! | TCTCATAGCTCTAACTCTAA+TGG | - | chr3.2:7549032-7549051 | MS.gene65734:intron | 35.0% |
| !!! | CCTGCTTTTTGAAAATCAAG+TGG | - | chr3.2:7549307-7549326 | MS.gene65734:intron | 35.0% |
| !!! | TCAGTGATCACTCCTTTTTT+TGG | + | chr3.2:7548693-7548712 | None:intergenic | 35.0% |
| !!! | TGGATAGTTGTTTTGAGCTA+AGG | + | chr3.2:7549819-7549838 | None:intergenic | 35.0% |
| AGAGTAACTGCTATTGGCAA+TGG | - | chr3.2:7550040-7550059 | MS.gene65734:intron | 40.0% | |
| AGGAAAATGTTAACCAGTGC+CGG | + | chr3.2:7549414-7549433 | None:intergenic | 40.0% | |
| ATGGCCACTAATATGAACTG+TGG | + | chr3.2:7550089-7550108 | None:intergenic | 40.0% | |
| CTAATGATCGAGAATCGTTG+CGG | + | chr3.2:7549685-7549704 | None:intergenic | 40.0% | |
| GAGCTAAGGTTATAAAGGAC+CGG | + | chr3.2:7549805-7549824 | None:intergenic | 40.0% | |
| GAGCTAGTAGCAAAACTCTT+TGG | + | chr3.2:7549065-7549084 | None:intergenic | 40.0% | |
| GGTGAATGTTCTTCTGCAAT+TGG | - | chr3.2:7550208-7550227 | MS.gene65734:CDS | 40.0% | |
| TCATGGCAAAATGGCTATGA+TGG | - | chr3.2:7548722-7548741 | MS.gene65734:CDS | 40.0% | |
| TGCCAATAGCAGTTACTCTA+TGG | + | chr3.2:7550039-7550058 | None:intergenic | 40.0% | |
| TGCCATAGAGTAACTGCTAT+TGG | - | chr3.2:7550034-7550053 | MS.gene65734:intron | 40.0% | |
| TTCTGTTGAATTGCAGATGC+AGG | - | chr3.2:7549962-7549981 | MS.gene65734:intron | 40.0% | |
| TTGGCCACAGTTCATATTAG+TGG | - | chr3.2:7550082-7550101 | MS.gene65734:CDS | 40.0% | |
| ! | CTCTATGATCATGGTGTTGA+TGG | - | chr3.2:7550124-7550143 | MS.gene65734:CDS | 40.0% |
| ! | TGAGGTTGTTGTTGTTGTTG+TGG | + | chr3.2:7548591-7548610 | None:intergenic | 40.0% |
| !! | AGTTCTGAAACACAAGGCAT+TGG | + | chr3.2:7550157-7550176 | None:intergenic | 40.0% |
| CTACAGCTTCTGCAAAATCG+CGG | + | chr3.2:7549276-7549295 | None:intergenic | 45.0% | |
| CTACTTCAGGACACATCCTA+AGG | + | chr3.2:7548662-7548681 | None:intergenic | 45.0% | |
| CTTCATCAGGGTTTGAACTC+CGG | - | chr3.2:7549783-7549802 | MS.gene65734:intron | 45.0% | |
| GAAAATGTTAACCAGTGCCG+GGG | + | chr3.2:7549412-7549431 | None:intergenic | 45.0% | |
| GCAGATGCAGGTTTCAAAGA+GGG | - | chr3.2:7549974-7549993 | MS.gene65734:intron | 45.0% | |
| GGAAAATGTTAACCAGTGCC+GGG | + | chr3.2:7549413-7549432 | None:intergenic | 45.0% | |
| GGTTTCAAAGAGGGTTTACC+AGG | - | chr3.2:7549983-7550002 | MS.gene65734:intron | 45.0% | |
| TGCAGATGCAGGTTTCAAAG+AGG | - | chr3.2:7549973-7549992 | MS.gene65734:intron | 45.0% | |
| TTCATGCACCAGCTGTATTC+AGG | - | chr3.2:7550011-7550030 | MS.gene65734:intron | 45.0% | |
| ! | AAAATGTTAACCAGTGCCGG+GGG | + | chr3.2:7549411-7549430 | None:intergenic | 45.0% |
| CAGAAGCTGTAGAGTCTCGA+TGG | - | chr3.2:7549284-7549303 | MS.gene65734:intron | 50.0% | |
| CGGAGTTCAAACCCTGATGA+AGG | + | chr3.2:7549785-7549804 | None:intergenic | 50.0% | |
| CGTGTGACTATGTGAATGCG+TGG | - | chr3.2:7549650-7549669 | MS.gene65734:intron | 50.0% | |
| CTATGGCACCTGAATACAGC+TGG | + | chr3.2:7550022-7550041 | None:intergenic | 50.0% | |
| ! | GCTACTAGCTCTTGTCACCA+AGG | - | chr3.2:7549074-7549093 | MS.gene65734:intron | 50.0% |
| !! | AGGACTTGTTGTAAGGGACG+TGG | - | chr3.2:7548837-7548856 | MS.gene65734:CDS | 50.0% |
| GATTCCTTCGACACGTCGTC+GGG | - | chr3.2:7548893-7548912 | MS.gene65734:intron | 55.0% | |
| GCTGGTGCATGAACATGACC+TGG | + | chr3.2:7550004-7550023 | None:intergenic | 55.0% | |
| GGATTCCTTCGACACGTCGT+CGG | - | chr3.2:7548892-7548911 | MS.gene65734:intron | 55.0% | |
| TGACCATTAACCAGTGCCCC+CGG | - | chr3.2:7549392-7549411 | MS.gene65734:intron | 55.0% | |
| ! | GGTGATGGTGAGGGTTGTTC+TGG | - | chr3.2:7548957-7548976 | MS.gene65734:intron | 55.0% |
| CGGGAGGTGGAGATGTTTGC+CGG | - | chr3.2:7548918-7548937 | MS.gene65734:intron | 60.0% | |
| CTTCGACACGTCGTCGGGAA+CGG | - | chr3.2:7548898-7548917 | MS.gene65734:intron | 60.0% | |
| GAGGTGGAGATGTTTGCCGG+TGG | - | chr3.2:7548921-7548940 | MS.gene65734:intron | 60.0% | |
| GTGGAGATGTTTGCCGGTGG+TGG | - | chr3.2:7548924-7548943 | MS.gene65734:intron | 60.0% | |
| TTCGACACGTCGTCGGGAAC+GGG | - | chr3.2:7548899-7548918 | MS.gene65734:intron | 60.0% | |
| ! | GAGATGTTTGCCGGTGGTGG+TGG | - | chr3.2:7548927-7548946 | MS.gene65734:intron | 60.0% |
| !! | ATGTTTGCCGGTGGTGGTGG+TGG | - | chr3.2:7548930-7548949 | MS.gene65734:intron | 60.0% |
| !! | GGTGGTGGTGGTGATGGTGA+GGG | - | chr3.2:7548948-7548967 | MS.gene65734:intron | 60.0% |
| !! | TGGTGGTGGTGGTGATGGTG+AGG | - | chr3.2:7548947-7548966 | MS.gene65734:intron | 60.0% |
| ACCACCACCACCACCACCAC+CGG | + | chr3.2:7548940-7548959 | None:intergenic | 65.0% | |
| CGTTCCCGACGACGTGTCGA+AGG | + | chr3.2:7548900-7548919 | None:intergenic | 65.0% | |
| TTAACCAGTGCCCCCGGCAC+TGG | - | chr3.2:7549398-7549417 | MS.gene65734:intron | 65.0% | |
| ! | TTAACCAGTGCCGGGGGCAC+TGG | + | chr3.2:7549405-7549424 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTGA+TGG | - | chr3.2:7548942-7548961 | MS.gene65734:intron | 65.0% |
| !! | GTGCCGGGGGCACTGGTTAA+TGG | + | chr3.2:7549398-7549417 | None:intergenic | 65.0% |
| !! | TTTGCCGGTGGTGGTGGTGG+TGG | - | chr3.2:7548933-7548952 | MS.gene65734:intron | 65.0% |
| ACGTCGTCGGGAACGGGAGG+TGG | - | chr3.2:7548905-7548924 | MS.gene65734:intron | 70.0% | |
| GACACGTCGTCGGGAACGGG+AGG | - | chr3.2:7548902-7548921 | MS.gene65734:intron | 70.0% | |
| !! | GCCGGTGGTGGTGGTGGTGG+TGG | - | chr3.2:7548936-7548955 | MS.gene65734:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 7548585 | 7550270 | 7548585 | ID=MS.gene65734 |
| chr3.2 | mRNA | 7548585 | 7550270 | 7548585 | ID=MS.gene65734.t1;Parent=MS.gene65734 |
| chr3.2 | exon | 7550057 | 7550270 | 7550057 | ID=MS.gene65734.t1.exon1;Parent=MS.gene65734.t1 |
| chr3.2 | CDS | 7550057 | 7550270 | 7550057 | ID=cds.MS.gene65734.t1;Parent=MS.gene65734.t1 |
| chr3.2 | exon | 7548585 | 7548877 | 7548585 | ID=MS.gene65734.t1.exon2;Parent=MS.gene65734.t1 |
| chr3.2 | CDS | 7548585 | 7548877 | 7548585 | ID=cds.MS.gene65734.t1;Parent=MS.gene65734.t1 |
| Gene Sequence |
| Protein sequence |
