Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65938.t1 | O48905.1 | 99.7 | 332 | 1 | 0 | 1 | 332 | 1 | 332 | 2.60E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65938.t1 | O48905 | 99.7 | 332 | 1 | 0 | 1 | 332 | 1 | 332 | 6.2e-185 | 647.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65938.t1 | B7FJQ4 | 98.8 | 332 | 4 | 0 | 1 | 332 | 1 | 332 | 5.9e-181 | 642.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68423 | MS.gene65938 | PPI |
| MS.gene032247 | MS.gene65938 | PPI |
| MS.gene21413 | MS.gene65938 | PPI |
| MS.gene005767 | MS.gene65938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65938.t1 | MTR_1g043040 | 98.795 | 332 | 4 | 0 | 1 | 332 | 1 | 332 | 0.0 | 677 |
| MS.gene65938.t1 | MTR_1g076130 | 92.470 | 332 | 25 | 0 | 1 | 332 | 1 | 332 | 0.0 | 617 |
| MS.gene65938.t1 | MTR_8g005980 | 84.802 | 329 | 50 | 0 | 3 | 331 | 85 | 413 | 0.0 | 563 |
| MS.gene65938.t1 | MTR_1g090730 | 39.210 | 329 | 193 | 4 | 3 | 328 | 92 | 416 | 9.22e-73 | 231 |
| MS.gene65938.t1 | MTR_1g090730 | 40.741 | 270 | 156 | 1 | 3 | 272 | 92 | 357 | 1.60e-61 | 202 |
| MS.gene65938.t1 | MTR_7g037650 | 73.913 | 46 | 12 | 0 | 15 | 60 | 24 | 69 | 6.51e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65938.t1 | AT1G04410 | 89.759 | 332 | 34 | 0 | 1 | 332 | 1 | 332 | 0.0 | 603 |
| MS.gene65938.t1 | AT5G43330 | 89.458 | 332 | 35 | 0 | 1 | 332 | 1 | 332 | 0.0 | 599 |
| MS.gene65938.t1 | AT5G56720 | 73.795 | 332 | 87 | 0 | 1 | 332 | 40 | 371 | 0.0 | 517 |
| MS.gene65938.t1 | AT5G58330 | 41.337 | 329 | 186 | 4 | 3 | 328 | 96 | 420 | 1.07e-78 | 247 |
| MS.gene65938.t1 | AT5G58330 | 41.337 | 329 | 186 | 4 | 3 | 328 | 97 | 421 | 1.41e-78 | 247 |
| MS.gene65938.t1 | AT5G58330 | 41.270 | 315 | 178 | 4 | 17 | 328 | 2 | 312 | 5.65e-76 | 237 |
Find 91 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAATCTTTCGGAAATT+TGG | 0.094023 | 1.1:+26882998 | None:intergenic |
| CACATTCGCGATTGGGTTCT+TGG | 0.190578 | 1.1:-26882405 | MS.gene65938:CDS |
| GCTGCATTTCCACTTCTTAA+AGG | 0.217111 | 1.1:-26884716 | MS.gene65938:intron |
| AAACAAGAAATGTTTCTTTC+TGG | 0.220813 | 1.1:+26883051 | None:intergenic |
| GTCATTGAATGGAGTTAAAA+TGG | 0.260659 | 1.1:-26884750 | MS.gene65938:CDS |
| GCTGACTGAGGAAAAGAATT+TGG | 0.291306 | 1.1:-26881464 | MS.gene65938:CDS |
| ATGTAAAGAATGTCATAATC+TGG | 0.320654 | 1.1:-26882963 | MS.gene65938:CDS |
| CATGGTTGACATCAGGATAC+TGG | 0.330089 | 1.1:+26882923 | None:intergenic |
| ATGTTTCTTTCTGGAATAGA+TGG | 0.330607 | 1.1:+26883060 | None:intergenic |
| AACTTGAACATTCAATCTTT+CGG | 0.331338 | 1.1:+26882990 | None:intergenic |
| CGGACGGGCTTCTCCCCAGC+TGG | 0.336380 | 1.1:+26882886 | None:intergenic |
| AAGAACACGAACTGGGTCTT+TGG | 0.339916 | 1.1:+26885781 | None:intergenic |
| TGTCAAATTTCAGGGCAAAT+TGG | 0.341571 | 1.1:-26884866 | MS.gene65938:intron |
| ACGTGGTGCTGCAATTATTA+AGG | 0.343639 | 1.1:-26882475 | MS.gene65938:CDS |
| GGCTCACTCTTGCCTCTCTT+AGG | 0.351901 | 1.1:-26881443 | None:intergenic |
| ATCAATGCATTGGTGTTTGC+TGG | 0.355483 | 1.1:+26883099 | None:intergenic |
| TGACTAGACTAGATCACAAT+AGG | 0.357382 | 1.1:-26883029 | MS.gene65938:CDS |
| ACTAGATCACAATAGGGCTT+TGG | 0.385573 | 1.1:-26883022 | MS.gene65938:CDS |
| CTAGATCACAATAGGGCTTT+GGG | 0.392356 | 1.1:-26883021 | MS.gene65938:CDS |
| CTTGTGACCACATTCGCGAT+TGG | 0.397092 | 1.1:-26882413 | MS.gene65938:CDS |
| TTGTGACCACATTCGCGATT+GGG | 0.424378 | 1.1:-26882412 | MS.gene65938:CDS |
| ATCACTCCCCTAGCAATCAT+AGG | 0.425010 | 1.1:+26884830 | None:intergenic |
| TTAGGGTACCTTCGTTTCAA+TGG | 0.430895 | 1.1:-26882289 | MS.gene65938:intron |
| TGAAGAATCACAGGTTGATC+AGG | 0.431944 | 1.1:+26884800 | None:intergenic |
| CACCAATGCATTGATCTTGA+AGG | 0.441335 | 1.1:-26883091 | MS.gene65938:CDS |
| GGACGGGCTTCTCCCCAGCT+GGG | 0.441906 | 1.1:+26882887 | None:intergenic |
| AAAAGAAGGTATGGAGAGGA+AGG | 0.445651 | 1.1:-26884482 | MS.gene65938:CDS |
| CCAGTTCGTGTTCTTGTCAC+TGG | 0.450164 | 1.1:-26885773 | MS.gene65938:CDS |
| CTCTTGTCCCTATGATTGCT+AGG | 0.451223 | 1.1:-26884838 | MS.gene65938:CDS |
| CCAGTGACAAGAACACGAAC+TGG | 0.452334 | 1.1:+26885773 | None:intergenic |
| TAGGGTACCTTCGTTTCAAT+GGG | 0.465774 | 1.1:-26882288 | MS.gene65938:CDS |
| ACAGTTGCATGGTTGACATC+AGG | 0.470853 | 1.1:+26882916 | None:intergenic |
| AACTTGTTTCCGACGATGCA+TGG | 0.473611 | 1.1:-26882861 | MS.gene65938:intron |
| CAATCCAGATGGTACATTGT+AGG | 0.475070 | 1.1:+26882248 | None:intergenic |
| GCAACTGTTAACACCCCAGC+TGG | 0.476508 | 1.1:-26882901 | MS.gene65938:CDS |
| TCACCATTGGCACAGGTGAC+AGG | 0.479094 | 1.1:+26882213 | None:intergenic |
| GGTTCCTACAATGTACCATC+TGG | 0.482781 | 1.1:-26882252 | MS.gene65938:CDS |
| TTGGGTTCTTGGAACTCCCC+AGG | 0.483482 | 1.1:-26882394 | MS.gene65938:intron |
| TGTAAAGAATGTCATAATCT+GGG | 0.486354 | 1.1:-26882962 | MS.gene65938:CDS |
| TGAGTTCTCAAGGAAGAAGT+TGG | 0.488677 | 1.1:-26881503 | MS.gene65938:CDS |
| CCATTCAATGACTCTGCTGC+AGG | 0.499494 | 1.1:+26884761 | None:intergenic |
| GGTGAATGGAAAATAGTTCA+AGG | 0.505213 | 1.1:-26882195 | MS.gene65938:intron |
| TTCCTTCAAGATCAATGCAT+TGG | 0.507360 | 1.1:+26883089 | None:intergenic |
| TAAATTATACCTTTAAGAAG+TGG | 0.509514 | 1.1:+26884707 | None:intergenic |
| GTTCTTGTCACTGGTGCCGC+AGG | 0.510375 | 1.1:-26885764 | MS.gene65938:intron |
| GTCAATATTGCTGTCATGGT+TGG | 0.510745 | 1.1:-26884517 | MS.gene65938:CDS |
| TGTCTCTATTTACAAGTCAC+AGG | 0.516540 | 1.1:-26884443 | MS.gene65938:CDS |
| TTCCCTGTCACCTGTGCCAA+TGG | 0.517722 | 1.1:-26882216 | MS.gene65938:CDS |
| TCTTGTCCCTATGATTGCTA+GGG | 0.522049 | 1.1:-26884837 | MS.gene65938:CDS |
| AATATTGCTGTCATGGTTGG+TGG | 0.527412 | 1.1:-26884514 | MS.gene65938:CDS |
| GACTAGACTAGATCACAATA+GGG | 0.527987 | 1.1:-26883028 | MS.gene65938:CDS |
| TTTCCATTCACCATTGGCAC+AGG | 0.528068 | 1.1:+26882206 | None:intergenic |
| CCTGCAGCAGAGTCATTGAA+TGG | 0.529172 | 1.1:-26884761 | MS.gene65938:CDS |
| ATTCCCAAGAAAAGAAGGTA+TGG | 0.532607 | 1.1:-26884491 | MS.gene65938:CDS |
| TCAATGGGAGTGTATTCTGA+TGG | 0.534652 | 1.1:-26882273 | MS.gene65938:CDS |
| TCACCTGTGCCAATGGTGAA+TGG | 0.535072 | 1.1:-26882209 | MS.gene65938:CDS |
| TCAAGCATGTGAAGAATCAC+AGG | 0.544982 | 1.1:+26884791 | None:intergenic |
| CACCATTGGCACAGGTGACA+GGG | 0.547097 | 1.1:+26882214 | None:intergenic |
| TGGAGTTAAAATGGAGTTGG+TGG | 0.549300 | 1.1:-26884741 | MS.gene65938:CDS |
| GAAAGGGATTACCTTGCAGT+TGG | 0.551890 | 1.1:+26884393 | None:intergenic |
| GATGTTGTTGAGGCATGCAC+TGG | 0.553507 | 1.1:-26884541 | MS.gene65938:CDS |
| TTTCAATTGATGAGTTCTCA+AGG | 0.554558 | 1.1:-26881513 | MS.gene65938:CDS |
| GGTGGATTCCCAAGAAAAGA+AGG | 0.558887 | 1.1:-26884496 | MS.gene65938:CDS |
| TGGAGTCAATATTGCTGTCA+TGG | 0.560156 | 1.1:-26884521 | MS.gene65938:CDS |
| GACGGGCTTCTCCCCAGCTG+GGG | 0.574611 | 1.1:+26882888 | None:intergenic |
| GAATGGAGTTAAAATGGAGT+TGG | 0.576011 | 1.1:-26884744 | MS.gene65938:CDS |
| TCACTCCCCTAGCAATCATA+GGG | 0.576220 | 1.1:+26884831 | None:intergenic |
| CAAGAACCCAATCGCGAATG+TGG | 0.578729 | 1.1:+26882406 | None:intergenic |
| TCAATGCATTGGTGTTTGCT+GGG | 0.583030 | 1.1:+26883100 | None:intergenic |
| ATTGCTAGGGGAGTGATGCT+CGG | 0.583162 | 1.1:-26884824 | MS.gene65938:CDS |
| GCATGCTGCTGCCAACTGCA+AGG | 0.584268 | 1.1:-26884404 | MS.gene65938:intron |
| CAACTGTTAACACCCCAGCT+GGG | 0.586874 | 1.1:-26882900 | MS.gene65938:CDS |
| ATGGTTGACATCAGGATACT+GGG | 0.588881 | 1.1:+26882924 | None:intergenic |
| CTGGGGTGTTAACAGTTGCA+TGG | 0.591846 | 1.1:+26882905 | None:intergenic |
| TCGGAAACAAGTTGACGGAC+GGG | 0.596905 | 1.1:+26882871 | None:intergenic |
| GTCGGAAACAAGTTGACGGA+CGG | 0.602916 | 1.1:+26882870 | None:intergenic |
| TGCTACAACCGATGTTGTTG+AGG | 0.602981 | 1.1:-26884551 | MS.gene65938:CDS |
| AAAATAAAGCAGCCTAAGAG+AGG | 0.609879 | 1.1:+26881431 | None:intergenic |
| CAGTGACAAGAACACGAACT+GGG | 0.614915 | 1.1:+26885774 | None:intergenic |
| CATCGTCGGAAACAAGTTGA+CGG | 0.615176 | 1.1:+26882866 | None:intergenic |
| CAAGAAAAGAAGGTATGGAG+AGG | 0.633211 | 1.1:-26884486 | MS.gene65938:CDS |
| TGTCATATACCATGCATCGT+CGG | 0.641057 | 1.1:+26882852 | None:intergenic |
| CTTGTCCCTATGATTGCTAG+GGG | 0.642364 | 1.1:-26884836 | MS.gene65938:CDS |
| AACTGTTAACACCCCAGCTG+GGG | 0.642403 | 1.1:-26882899 | MS.gene65938:CDS |
| AATGAATAGATCAATCCAGA+TGG | 0.645749 | 1.1:+26882237 | None:intergenic |
| GTAAAGAATGTCATAATCTG+GGG | 0.647423 | 1.1:-26882961 | MS.gene65938:CDS |
| GACAGCCGAAGAGCTGACTG+AGG | 0.649625 | 1.1:-26881476 | MS.gene65938:CDS |
| ATACACTCCCATTGAAACGA+AGG | 0.652020 | 1.1:+26882281 | None:intergenic |
| AGTGCATGCCTCAACAACAT+CGG | 0.653960 | 1.1:+26884543 | None:intergenic |
| AGCACCACGTTGTTGAACAG+TGG | 0.672850 | 1.1:+26882488 | None:intergenic |
| ATTTCCACTGTTCAACAACG+TGG | 0.687346 | 1.1:-26882492 | MS.gene65938:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTATTTTTATTTTTT+TGG | - | chr1.1:26884056-26884075 | MS.gene65938:intron | 0.0% |
| !! | AATATTGTATATATAGAAAA+AGG | - | chr1.1:26882956-26882975 | MS.gene65938:CDS | 10.0% |
| !! | ATATTGTATATATAGAAAAA+GGG | - | chr1.1:26882957-26882976 | MS.gene65938:CDS | 10.0% |
| !!! | TTTTTCTATATATACAATAT+TGG | + | chr1.1:26882957-26882976 | None:intergenic | 10.0% |
| !! | AAATTTATTAGGAAAAAAAC+AGG | + | chr1.1:26883551-26883570 | None:intergenic | 15.0% |
| !! | AATTTATTAGGAAAAAAACA+GGG | + | chr1.1:26883550-26883569 | None:intergenic | 15.0% |
| !! | AGTATATGAAACATTTAATA+TGG | + | chr1.1:26882552-26882571 | None:intergenic | 15.0% |
| !! | ATATTAAATGTTTCATATAC+TGG | - | chr1.1:26882551-26882570 | MS.gene65938:intron | 15.0% |
| !! | ATTATACAATATACTACATA+TGG | + | chr1.1:26883251-26883270 | None:intergenic | 15.0% |
| !! | CAAAGAATAACAAATTTATT+AGG | + | chr1.1:26883562-26883581 | None:intergenic | 15.0% |
| !! | TACAAAATTTAACTCAAATT+TGG | + | chr1.1:26885657-26885676 | None:intergenic | 15.0% |
| !! | TATATTCAATCATAGTTTAT+TGG | + | chr1.1:26883726-26883745 | None:intergenic | 15.0% |
| !! | TTCTAATGAAATTGAAATTA+TGG | - | chr1.1:26885417-26885436 | MS.gene65938:intron | 15.0% |
| !!! | AATTTGAGTTAAATTTTGTA+CGG | - | chr1.1:26885657-26885676 | MS.gene65938:intron | 15.0% |
| !!! | CTAATAAATTTGTTATTCTT+TGG | - | chr1.1:26883560-26883579 | MS.gene65938:intron | 15.0% |
| !!! | CTAATTTAATTTTGATCTAA+TGG | - | chr1.1:26882291-26882310 | MS.gene65938:intron | 15.0% |
| !!! | TAATAACAGAATTTTATGTA+AGG | + | chr1.1:26883487-26883506 | None:intergenic | 15.0% |
| !!! | TCATTTTTGTTTAAAAAACT+TGG | + | chr1.1:26883066-26883085 | None:intergenic | 15.0% |
| !!! | TGATTATTGATAATGTTATA+TGG | + | chr1.1:26883211-26883230 | None:intergenic | 15.0% |
| !!! | TTTTAAGTAAAGATTCAATT+TGG | - | chr1.1:26881843-26881862 | MS.gene65938:intron | 15.0% |
| !! | AAAAAAATCATCAGAAAACA+TGG | + | chr1.1:26881598-26881617 | None:intergenic | 20.0% |
| !! | AAAAAACTTAGTTGTTGTAT+CGG | - | chr1.1:26883672-26883691 | MS.gene65938:intron | 20.0% |
| !! | AAAAACATAGATCAAAACAT+GGG | + | chr1.1:26881547-26881566 | None:intergenic | 20.0% |
| !! | AGATCATAAATAGTTAAGAA+TGG | + | chr1.1:26884489-26884508 | None:intergenic | 20.0% |
| !! | ATATAAAAAAGTGACTAATG+TGG | + | chr1.1:26881915-26881934 | None:intergenic | 20.0% |
| !! | ATATGAAACATTTAATATGG+AGG | + | chr1.1:26882549-26882568 | None:intergenic | 20.0% |
| !! | ATCATATGGATATATGAATT+AGG | + | chr1.1:26883945-26883964 | None:intergenic | 20.0% |
| !! | TACAAAAACAACAGTTAAAA+AGG | - | chr1.1:26884619-26884638 | MS.gene65938:intron | 20.0% |
| !!! | AAATGTAATGATGTTTTTTG+AGG | + | chr1.1:26883031-26883050 | None:intergenic | 20.0% |
| !!! | AGTTTGGATTTATTTTTTGT+CGG | - | chr1.1:26882007-26882026 | MS.gene65938:intron | 20.0% |
| !!! | ATGGTTTGTAAAAACAAAAA+AGG | + | chr1.1:26885176-26885195 | None:intergenic | 20.0% |
| !!! | ATTTTTAGACGTTGTTTTAT+AGG | - | chr1.1:26884427-26884446 | MS.gene65938:CDS | 20.0% |
| !!! | TAAATTATACCTTTAAGAAG+TGG | + | chr1.1:26882525-26882544 | None:intergenic | 20.0% |
| !!! | TTGTATTCTTTTACAATTTC+TGG | - | chr1.1:26885477-26885496 | MS.gene65938:intron | 20.0% |
| !!! | TTTTTTGGAAAATTTACAGA+AGG | - | chr1.1:26884071-26884090 | MS.gene65938:intron | 20.0% |
| ! | AAACAAGAAATGTTTCTTTC+TGG | + | chr1.1:26884181-26884200 | None:intergenic | 25.0% |
| ! | AAATGTTTCATATACTGGAT+GGG | - | chr1.1:26882556-26882575 | MS.gene65938:intron | 25.0% |
| ! | AACTTGAACATTCAATCTTT+CGG | + | chr1.1:26884242-26884261 | None:intergenic | 25.0% |
| ! | AATCGATATGAACTACTAAT+TGG | + | chr1.1:26883420-26883439 | None:intergenic | 25.0% |
| ! | ACCAAGAAATGAAATGTTAT+AGG | + | chr1.1:26883315-26883334 | None:intergenic | 25.0% |
| ! | ACCTATAACATTTCATTTCT+TGG | - | chr1.1:26883311-26883330 | MS.gene65938:intron | 25.0% |
| ! | ATAATACCCTTCACTATTTA+TGG | + | chr1.1:26884533-26884552 | None:intergenic | 25.0% |
| ! | ATAATGTTCTGTCAAATTTC+AGG | - | chr1.1:26882354-26882373 | MS.gene65938:intron | 25.0% |
| ! | ATATGGATATATGAATTAGG+TGG | + | chr1.1:26883942-26883961 | None:intergenic | 25.0% |
| ! | ATGAATAAAATTAGACTCCT+TGG | + | chr1.1:26883989-26884008 | None:intergenic | 25.0% |
| ! | ATGTAAAGAATGTCATAATC+TGG | - | chr1.1:26884266-26884285 | MS.gene65938:intron | 25.0% |
| ! | CAAAAACATAGATCAAAACA+TGG | + | chr1.1:26881548-26881567 | None:intergenic | 25.0% |
| ! | CTTTAGTTGAAAATGTAAAG+AGG | + | chr1.1:26885270-26885289 | None:intergenic | 25.0% |
| ! | GATAGAAAATGCATACAAAA+GGG | + | chr1.1:26883398-26883417 | None:intergenic | 25.0% |
| ! | TAAATGTTTCATATACTGGA+TGG | - | chr1.1:26882555-26882574 | MS.gene65938:intron | 25.0% |
| ! | TAATGTTCTGTCAAATTTCA+GGG | - | chr1.1:26882355-26882374 | MS.gene65938:intron | 25.0% |
| ! | TGTAAAGAATGTCATAATCT+GGG | - | chr1.1:26884267-26884286 | MS.gene65938:intron | 25.0% |
| ! | TGTGTGAAATTATTTGTTTC+AGG | - | chr1.1:26882649-26882668 | MS.gene65938:intron | 25.0% |
| ! | TTATTTGAAAACAAGCAGTT+TGG | - | chr1.1:26884024-26884043 | MS.gene65938:intron | 25.0% |
| ! | TTTGAATGTCTACCAAAATA+TGG | + | chr1.1:26883114-26883133 | None:intergenic | 25.0% |
| !! | AATTTTATGTAAGGTCAGAT+TGG | + | chr1.1:26883478-26883497 | None:intergenic | 25.0% |
| !! | TCTTTTCCATTGTAATGTTA+GGG | - | chr1.1:26884923-26884942 | MS.gene65938:intron | 25.0% |
| !! | TTCTTTTCCATTGTAATGTT+AGG | - | chr1.1:26884922-26884941 | MS.gene65938:intron | 25.0% |
| !! | TTGAAATCTTTGATTCGATA+TGG | - | chr1.1:26882579-26882598 | MS.gene65938:intron | 25.0% |
| !! | TTTCTTGGTAATAAAACTTG+TGG | - | chr1.1:26883326-26883345 | MS.gene65938:intron | 25.0% |
| !!! | CTGCTTGTTTTCAAATAAAA+AGG | + | chr1.1:26884022-26884041 | None:intergenic | 25.0% |
| !!! | GTTTGGATTTATTTTTTGTC+GGG | - | chr1.1:26882008-26882027 | MS.gene65938:intron | 25.0% |
| !!! | TTAGTCACTTTTTTATATCG+AGG | - | chr1.1:26881917-26881936 | MS.gene65938:intron | 25.0% |
| !!! | TTTGGATTTATTTTTTGTCG+GGG | - | chr1.1:26882009-26882028 | MS.gene65938:intron | 25.0% |
| AAATTAAAATGTAGCCAACC+TGG | + | chr1.1:26884856-26884875 | None:intergenic | 30.0% | |
| AACAACAGTTAAAAAGGAAC+TGG | - | chr1.1:26884625-26884644 | MS.gene65938:intron | 30.0% | |
| AAGTCTGAGTTTATGATGAA+AGG | + | chr1.1:26882856-26882875 | None:intergenic | 30.0% | |
| AATGAATAGATCAATCCAGA+TGG | + | chr1.1:26884995-26885014 | None:intergenic | 30.0% | |
| AATGAATCATGTGACTTTAG+AGG | - | chr1.1:26885592-26885611 | MS.gene65938:intron | 30.0% | |
| AATGTCTACCAAAATATGGT+AGG | + | chr1.1:26883110-26883129 | None:intergenic | 30.0% | |
| AATTAAAATGTAGCCAACCT+GGG | + | chr1.1:26884855-26884874 | None:intergenic | 30.0% | |
| ACAACAGTTAAAAAGGAACT+GGG | - | chr1.1:26884626-26884645 | MS.gene65938:intron | 30.0% | |
| ACCTGTATATTCACTTTACT+CGG | - | chr1.1:26885140-26885159 | MS.gene65938:intron | 30.0% | |
| AGACGATCTAGATTAATAGT+CGG | + | chr1.1:26882273-26882292 | None:intergenic | 30.0% | |
| AGTCTGAGTTTATGATGAAA+GGG | + | chr1.1:26882855-26882874 | None:intergenic | 30.0% | |
| ATAACAAAAACCGACAACTT+AGG | + | chr1.1:26885238-26885257 | None:intergenic | 30.0% | |
| ATGTCTACCAAAATATGGTA+GGG | + | chr1.1:26883109-26883128 | None:intergenic | 30.0% | |
| CAACCTAAATAGAGAAAAGT+TGG | + | chr1.1:26884705-26884724 | None:intergenic | 30.0% | |
| CATTCAATCTTTCGGAAATT+TGG | + | chr1.1:26884234-26884253 | None:intergenic | 30.0% | |
| CGATCTGTCATAATGAATTA+GGG | + | chr1.1:26881953-26881972 | None:intergenic | 30.0% | |
| GAAAGTTGCATTCTCATAAT+TGG | - | chr1.1:26882192-26882211 | MS.gene65938:intron | 30.0% | |
| GAGGATTGTAAAATCAAGTA+TGG | + | chr1.1:26885376-26885395 | None:intergenic | 30.0% | |
| GGATAGAAAATGCATACAAA+AGG | + | chr1.1:26883399-26883418 | None:intergenic | 30.0% | |
| GTAAAGAATGTCATAATCTG+GGG | - | chr1.1:26884268-26884287 | MS.gene65938:intron | 30.0% | |
| GTCATTGAATGGAGTTAAAA+TGG | - | chr1.1:26882479-26882498 | MS.gene65938:CDS | 30.0% | |
| TATTTATGGCAGAGAGTAAT+AGG | + | chr1.1:26884519-26884538 | None:intergenic | 30.0% | |
| TCGATCTGTCATAATGAATT+AGG | + | chr1.1:26881954-26881973 | None:intergenic | 30.0% | |
| TCTTCTACTATAGAACACTA+TGG | - | chr1.1:26883618-26883637 | MS.gene65938:intron | 30.0% | |
| TTCAACACTTATGATTGTGA+TGG | + | chr1.1:26885204-26885223 | None:intergenic | 30.0% | |
| TTCGATCTTGATCTGTTAAT+GGG | - | chr1.1:26881663-26881682 | MS.gene65938:intron | 30.0% | |
| TTTCAATTGATGAGTTCTCA+AGG | - | chr1.1:26885716-26885735 | MS.gene65938:intron | 30.0% | |
| TTTCGATCTTGATCTGTTAA+TGG | - | chr1.1:26881662-26881681 | MS.gene65938:intron | 30.0% | |
| TTTCGCAATGAAGACATTAA+GGG | - | chr1.1:26883764-26883783 | MS.gene65938:intron | 30.0% | |
| ! | AACTATTTTCCATTCACCAT+TGG | + | chr1.1:26885032-26885051 | None:intergenic | 30.0% |
| ! | GCAAATTTTCACATGAAATC+AGG | - | chr1.1:26883902-26883921 | MS.gene65938:intron | 30.0% |
| ! | GTTCCAACTTTTCTCTATTT+AGG | - | chr1.1:26884699-26884718 | MS.gene65938:intron | 30.0% |
| ! | TCAAAATCCCTACCATATTT+TGG | - | chr1.1:26883099-26883118 | MS.gene65938:CDS | 30.0% |
| ! | TTTTCGCAATGAAGACATTA+AGG | - | chr1.1:26883763-26883782 | MS.gene65938:intron | 30.0% |
| ! | TTTTGATCTAATGGCATGAA+GGG | - | chr1.1:26882300-26882319 | MS.gene65938:intron | 30.0% |
| !! | ATGTTTCTTTCTGGAATAGA+TGG | + | chr1.1:26884172-26884191 | None:intergenic | 30.0% |
| !! | ATTTTGATCTAATGGCATGA+AGG | - | chr1.1:26882299-26882318 | MS.gene65938:intron | 30.0% |
| !! | GTTTTATTGACAGTACAGAA+AGG | + | chr1.1:26885342-26885361 | None:intergenic | 30.0% |
| !!! | TAAGTTTTTTGCGACTGAAT+GGG | + | chr1.1:26883662-26883681 | None:intergenic | 30.0% |
| !!! | TTTTCTCTATTTAGGTTGAG+TGG | - | chr1.1:26884707-26884726 | MS.gene65938:intron | 30.0% |
| !!! | TTTTGGTGTTTGTTGATAAC+TGG | - | chr1.1:26885111-26885130 | MS.gene65938:intron | 30.0% |
| AAAATTGCGAGGGAACAAAT+TGG | - | chr1.1:26882050-26882069 | MS.gene65938:intron | 35.0% | |
| AAACAGTAGAGAAGAGATCA+TGG | + | chr1.1:26881505-26881524 | None:intergenic | 35.0% | |
| AAATTGCGAGGGAACAAATT+GGG | - | chr1.1:26882051-26882070 | MS.gene65938:intron | 35.0% | |
| AACAAACACCAAAAACTGAG+GGG | + | chr1.1:26885105-26885124 | None:intergenic | 35.0% | |
| AACAGTTAAAAAGGAACTGG+GGG | - | chr1.1:26884628-26884647 | MS.gene65938:intron | 35.0% | |
| AACCCACTACACATGAAATT+TGG | + | chr1.1:26882138-26882157 | None:intergenic | 35.0% | |
| ACCGAGTAAAGTGAATATAC+AGG | + | chr1.1:26885144-26885163 | None:intergenic | 35.0% | |
| ATCACATGGACTTCATCATA+TGG | + | chr1.1:26883959-26883978 | None:intergenic | 35.0% | |
| ATTAAAATGTAGCCAACCTG+GGG | + | chr1.1:26884854-26884873 | None:intergenic | 35.0% | |
| ATTCCCAAGAAAAGAAGGTA+TGG | - | chr1.1:26882738-26882757 | MS.gene65938:intron | 35.0% | |
| CAACAAACACCAAAAACTGA+GGG | + | chr1.1:26885106-26885125 | None:intergenic | 35.0% | |
| CAACAGTTAAAAAGGAACTG+GGG | - | chr1.1:26884627-26884646 | MS.gene65938:intron | 35.0% | |
| CAGAAAACATGGTTAGATCA+TGG | + | chr1.1:26881587-26881606 | None:intergenic | 35.0% | |
| CTAATGTGGATTTATCGTGT+CGG | + | chr1.1:26881901-26881920 | None:intergenic | 35.0% | |
| CTTTGTATCCAATGTTGCAA+TGG | - | chr1.1:26882882-26882901 | MS.gene65938:CDS | 35.0% | |
| GAAAAGAAAATAAGCCGATC+TGG | + | chr1.1:26884910-26884929 | None:intergenic | 35.0% | |
| GAAAGTCCTGTGGATAAAAA+AGG | + | chr1.1:26885700-26885719 | None:intergenic | 35.0% | |
| GAATGGAGTTAAAATGGAGT+TGG | - | chr1.1:26882485-26882504 | MS.gene65938:CDS | 35.0% | |
| GACTAGACTAGATCACAATA+GGG | - | chr1.1:26884201-26884220 | MS.gene65938:intron | 35.0% | |
| GGTGAATGGAAAATAGTTCA+AGG | - | chr1.1:26885034-26885053 | MS.gene65938:intron | 35.0% | |
| GTCCAAATTTCATGTGTAGT+GGG | - | chr1.1:26882133-26882152 | MS.gene65938:intron | 35.0% | |
| TAAAAATGTCGGCACTAGTT+TGG | - | chr1.1:26881991-26882010 | MS.gene65938:intron | 35.0% | |
| TAATGTGGATTTATCGTGTC+GGG | + | chr1.1:26881900-26881919 | None:intergenic | 35.0% | |
| TATATAGAAAAAGGGAAGCC+CGG | - | chr1.1:26882965-26882984 | MS.gene65938:CDS | 35.0% | |
| TCAACAAACACCAAAAACTG+AGG | + | chr1.1:26885107-26885126 | None:intergenic | 35.0% | |
| TCACATGAAATCAGGTGTAT+GGG | - | chr1.1:26883910-26883929 | MS.gene65938:intron | 35.0% | |
| TCTCTGCCATAAATAGTGAA+GGG | - | chr1.1:26884524-26884543 | MS.gene65938:CDS | 35.0% | |
| TGACTAGACTAGATCACAAT+AGG | - | chr1.1:26884200-26884219 | MS.gene65938:intron | 35.0% | |
| TGTCAAATTTCAGGGCAAAT+TGG | - | chr1.1:26882363-26882382 | MS.gene65938:intron | 35.0% | |
| TGTCCAAATTTCATGTGTAG+TGG | - | chr1.1:26882132-26882151 | MS.gene65938:intron | 35.0% | |
| TGTCCCAGGTATAAAAATGT+CGG | - | chr1.1:26881980-26881999 | MS.gene65938:intron | 35.0% | |
| TGTCTCTATTTACAAGTCAC+AGG | - | chr1.1:26882786-26882805 | MS.gene65938:intron | 35.0% | |
| TTCACATGAAATCAGGTGTA+TGG | - | chr1.1:26883909-26883928 | MS.gene65938:intron | 35.0% | |
| TTCCTTCAAGATCAATGCAT+TGG | + | chr1.1:26884143-26884162 | None:intergenic | 35.0% | |
| TTCTGTATTTGCTTCCAGAT+CGG | - | chr1.1:26884893-26884912 | MS.gene65938:intron | 35.0% | |
| TTGAAATATCTTGCAGGTTC+TGG | - | chr1.1:26884096-26884115 | MS.gene65938:intron | 35.0% | |
| TTTACAATCCTCATACTCCT+TGG | - | chr1.1:26885384-26885403 | MS.gene65938:intron | 35.0% | |
| ! | AAATGTTTCCCCTCAGTTTT+TGG | - | chr1.1:26885094-26885113 | MS.gene65938:intron | 35.0% |
| ! | AAGGTACCCTAACATTACAA+TGG | + | chr1.1:26884932-26884951 | None:intergenic | 35.0% |
| ! | AATGGACTTTGTCATGTCAT+CGG | - | chr1.1:26882900-26882919 | MS.gene65938:CDS | 35.0% |
| ! | ACACTTATGATTGTGATGGA+TGG | + | chr1.1:26885200-26885219 | None:intergenic | 35.0% |
| ! | TCTCCATACCTTCTTTTCTT+GGG | + | chr1.1:26882744-26882763 | None:intergenic | 35.0% |
| ! | TCTCTACTGTTTCTTCACTT+TGG | - | chr1.1:26881513-26881532 | MS.gene65938:CDS | 35.0% |
| !! | AAGGCTTTGAAATATCTTGC+AGG | - | chr1.1:26884090-26884109 | MS.gene65938:intron | 35.0% |
| !! | TATGATTGTGATGGATGGTA+TGG | + | chr1.1:26885195-26885214 | None:intergenic | 35.0% |
| !! | TCTTGATCTGTTAATGGGTT+CGG | - | chr1.1:26881668-26881687 | MS.gene65938:intron | 35.0% |
| !!! | AAGTTTTTTGCGACTGAATG+GGG | + | chr1.1:26883661-26883680 | None:intergenic | 35.0% |
| !!! | CTAAGTTTTTTGCGACTGAA+TGG | + | chr1.1:26883663-26883682 | None:intergenic | 35.0% |
| !!! | TCTTCACCTTTTTTATCCAC+AGG | - | chr1.1:26885691-26885710 | MS.gene65938:intron | 35.0% |
| !!! | TTTTTTGTCGGGGACTTAAT+TGG | - | chr1.1:26882019-26882038 | MS.gene65938:intron | 35.0% |
| AAAACTTGTGGTTGAACCAG+CGG | - | chr1.1:26883338-26883357 | MS.gene65938:intron | 40.0% | |
| AATATTGCTGTCATGGTTGG+TGG | - | chr1.1:26882715-26882734 | MS.gene65938:intron | 40.0% | |
| AATGTGGATTTATCGTGTCG+GGG | + | chr1.1:26881899-26881918 | None:intergenic | 40.0% | |
| ACTAGATCACAATAGGGCTT+TGG | - | chr1.1:26884207-26884226 | MS.gene65938:intron | 40.0% | |
| ATACACTCCCATTGAAACGA+AGG | + | chr1.1:26884951-26884970 | None:intergenic | 40.0% | |
| ATGGACTTTGTCATGTCATC+GGG | - | chr1.1:26882901-26882920 | MS.gene65938:CDS | 40.0% | |
| ATGGTTGACATCAGGATACT+GGG | + | chr1.1:26884308-26884327 | None:intergenic | 40.0% | |
| ATTAAAGCTCCTGCATATGC+AGG | - | chr1.1:26882991-26883010 | MS.gene65938:CDS | 40.0% | |
| ATTGGAAATGTAGCGACTAC+TGG | - | chr1.1:26882210-26882229 | MS.gene65938:CDS | 40.0% | |
| ATTTCCACTGTTCAACAACG+TGG | - | chr1.1:26884737-26884756 | MS.gene65938:CDS | 40.0% | |
| CAATCCAGATGGTACATTGT+AGG | + | chr1.1:26884984-26885003 | None:intergenic | 40.0% | |
| CATTGTGCGAAATTGTGATG+TGG | - | chr1.1:26882160-26882179 | MS.gene65938:intron | 40.0% | |
| CGACTACTGGATTTAATCTG+CGG | - | chr1.1:26882223-26882242 | MS.gene65938:CDS | 40.0% | |
| CTAATGGCATGAAGGGAATT+TGG | - | chr1.1:26882307-26882326 | MS.gene65938:intron | 40.0% | |
| CTAGATCACAATAGGGCTTT+GGG | - | chr1.1:26884208-26884227 | MS.gene65938:intron | 40.0% | |
| CTCATCAATTGAAAGTCCTG+TGG | + | chr1.1:26885710-26885729 | None:intergenic | 40.0% | |
| CTCTCTGCCATAAATAGTGA+AGG | - | chr1.1:26884523-26884542 | MS.gene65938:CDS | 40.0% | |
| GACAAAGTCCATTGCAACAT+TGG | + | chr1.1:26882893-26882912 | None:intergenic | 40.0% | |
| GACAAATTTAGTAGTACCGC+TGG | + | chr1.1:26883357-26883376 | None:intergenic | 40.0% | |
| GCTGACTGAGGAAAAGAATT+TGG | - | chr1.1:26885765-26885784 | MS.gene65938:CDS | 40.0% | |
| GCTGCATTTCCACTTCTTAA+AGG | - | chr1.1:26882513-26882532 | MS.gene65938:intron | 40.0% | |
| GTCAATATTGCTGTCATGGT+TGG | - | chr1.1:26882712-26882731 | MS.gene65938:intron | 40.0% | |
| TATCGTGTCGGGGAATAAAT+TGG | + | chr1.1:26881889-26881908 | None:intergenic | 40.0% | |
| TCAAGCATGTGAAGAATCAC+AGG | + | chr1.1:26882441-26882460 | None:intergenic | 40.0% | |
| TCTTGTCCCTATGATTGCTA+GGG | - | chr1.1:26882392-26882411 | MS.gene65938:intron | 40.0% | |
| TGAGTTCTCAAGGAAGAAGT+TGG | - | chr1.1:26885726-26885745 | MS.gene65938:intron | 40.0% | |
| TGGAGTCAATATTGCTGTCA+TGG | - | chr1.1:26882708-26882727 | MS.gene65938:intron | 40.0% | |
| TGGAGTTAAAATGGAGTTGG+TGG | - | chr1.1:26882488-26882507 | MS.gene65938:CDS | 40.0% | |
| TGTCATATACCATGCATCGT+CGG | + | chr1.1:26884380-26884399 | None:intergenic | 40.0% | |
| TTAAAGCTCCTGCATATGCA+GGG | - | chr1.1:26882992-26883011 | MS.gene65938:CDS | 40.0% | |
| TTATGTAAGGTCAGATTGGC+TGG | + | chr1.1:26883474-26883493 | None:intergenic | 40.0% | |
| ! | AAAAGAAGGTATGGAGAGGA+AGG | - | chr1.1:26882747-26882766 | MS.gene65938:intron | 40.0% |
| ! | ACATTAAGGGTGTGTTTGGA+TGG | - | chr1.1:26883777-26883796 | MS.gene65938:intron | 40.0% |
| ! | ATCAATGCATTGGTGTTTGC+TGG | + | chr1.1:26884133-26884152 | None:intergenic | 40.0% |
| ! | CAAGAAAAGAAGGTATGGAG+AGG | - | chr1.1:26882743-26882762 | MS.gene65938:intron | 40.0% |
| ! | CACCAATGCATTGATCTTGA+AGG | - | chr1.1:26884138-26884157 | MS.gene65938:intron | 40.0% |
| ! | CTCTCCATACCTTCTTTTCT+TGG | + | chr1.1:26882745-26882764 | None:intergenic | 40.0% |
| ! | GAAGACATTAAGGGTGTGTT+TGG | - | chr1.1:26883773-26883792 | MS.gene65938:intron | 40.0% |
| ! | GAAGAGATCATGGTGATGAA+AGG | + | chr1.1:26881495-26881514 | None:intergenic | 40.0% |
| ! | TAGGGTACCTTCGTTTCAAT+GGG | - | chr1.1:26884941-26884960 | MS.gene65938:intron | 40.0% |
| ! | TCAATGCATTGGTGTTTGCT+GGG | + | chr1.1:26884132-26884151 | None:intergenic | 40.0% |
| ! | TCAATGGGAGTGTATTCTGA+TGG | - | chr1.1:26884956-26884975 | MS.gene65938:intron | 40.0% |
| ! | TTAGGGTACCTTCGTTTCAA+TGG | - | chr1.1:26884940-26884959 | MS.gene65938:intron | 40.0% |
| !! | AACCCTCGTGCTTAATTTGT+CGG | - | chr1.1:26885297-26885316 | MS.gene65938:intron | 40.0% |
| !! | ACGTGGTGCTGCAATTATTA+AGG | - | chr1.1:26884754-26884773 | MS.gene65938:CDS | 40.0% |
| !! | ATTAGAAAAGCACTCCACCA+AGG | + | chr1.1:26885404-26885423 | None:intergenic | 40.0% |
| !! | GTGCCGACATTTTTATACCT+GGG | + | chr1.1:26881986-26882005 | None:intergenic | 40.0% |
| !! | TGAAGAATCACAGGTTGATC+AGG | + | chr1.1:26882432-26882451 | None:intergenic | 40.0% |
| !!! | AGTGCCGACATTTTTATACC+TGG | + | chr1.1:26881987-26882006 | None:intergenic | 40.0% |
| AAACCGACAACTTAGGCATG+AGG | + | chr1.1:26885231-26885250 | None:intergenic | 45.0% | |
| AACCGACAACTTAGGCATGA+GGG | + | chr1.1:26885230-26885249 | None:intergenic | 45.0% | |
| AAGAACACGAACTGGGTCTT+TGG | + | chr1.1:26881451-26881470 | None:intergenic | 45.0% | |
| ACAATCCTCATACTCCTTGG+TGG | - | chr1.1:26885387-26885406 | MS.gene65938:intron | 45.0% | |
| ACACCGACAAATTAAGCACG+AGG | + | chr1.1:26885303-26885322 | None:intergenic | 45.0% | |
| ACAGTTGCATGGTTGACATC+AGG | + | chr1.1:26884316-26884335 | None:intergenic | 45.0% | |
| AGTGCATGCCTCAACAACAT+CGG | + | chr1.1:26882689-26882708 | None:intergenic | 45.0% | |
| ATCACTCCCCTAGCAATCAT+AGG | + | chr1.1:26882402-26882421 | None:intergenic | 45.0% | |
| CACCGACAAATTAAGCACGA+GGG | + | chr1.1:26885302-26885321 | None:intergenic | 45.0% | |
| CAGTGACAAGAACACGAACT+GGG | + | chr1.1:26881458-26881477 | None:intergenic | 45.0% | |
| CATGGTTGACATCAGGATAC+TGG | + | chr1.1:26884309-26884328 | None:intergenic | 45.0% | |
| CTCTTGTCCCTATGATTGCT+AGG | - | chr1.1:26882391-26882410 | MS.gene65938:intron | 45.0% | |
| CTTGTCCCTATGATTGCTAG+GGG | - | chr1.1:26882393-26882412 | MS.gene65938:intron | 45.0% | |
| GAAAGGGATTACCTTGCAGT+TGG | + | chr1.1:26882839-26882858 | None:intergenic | 45.0% | |
| GGCATGAAGGGAATTTGGTT+CGG | - | chr1.1:26882312-26882331 | MS.gene65938:intron | 45.0% | |
| GGTTCCTACAATGTACCATC+TGG | - | chr1.1:26884977-26884996 | MS.gene65938:intron | 45.0% | |
| TCACTCCCCTAGCAATCATA+GGG | + | chr1.1:26882401-26882420 | None:intergenic | 45.0% | |
| TCCATGTGATTTCATCGCCA+AGG | - | chr1.1:26883969-26883988 | MS.gene65938:intron | 45.0% | |
| TCCTTGGCGATGAAATCACA+TGG | + | chr1.1:26883973-26883992 | None:intergenic | 45.0% | |
| TGCTACAACCGATGTTGTTG+AGG | - | chr1.1:26882678-26882697 | MS.gene65938:intron | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr1.1:26883787-26883806 | MS.gene65938:intron | 45.0% | |
| TTGGATGGAGGGTTTAGGAA+GGG | - | chr1.1:26883792-26883811 | MS.gene65938:intron | 45.0% | |
| TTGTCATGTCATCGGGTCAA+TGG | - | chr1.1:26882908-26882927 | MS.gene65938:CDS | 45.0% | |
| TTGTGACCACATTCGCGATT+GGG | - | chr1.1:26884817-26884836 | MS.gene65938:CDS | 45.0% | |
| TTTCCATTCACCATTGGCAC+AGG | + | chr1.1:26885026-26885045 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+AGG | - | chr1.1:26883791-26883810 | MS.gene65938:intron | 45.0% | |
| ! | AACTTGTTTCCGACGATGCA+TGG | - | chr1.1:26884368-26884387 | MS.gene65938:intron | 45.0% |
| ! | ATGCAGGAGCTTTAATGCAC+CGG | + | chr1.1:26882987-26883006 | None:intergenic | 45.0% |
| ! | CAGATCGACTAATTTGTCCC+AGG | - | chr1.1:26881966-26881985 | MS.gene65938:intron | 45.0% |
| ! | CATCGTCGGAAACAAGTTGA+CGG | + | chr1.1:26884366-26884385 | None:intergenic | 45.0% |
| ! | CTTTTCCTCAGTCAGCTCTT+CGG | + | chr1.1:26885761-26885780 | None:intergenic | 45.0% |
| ! | GGTGGATTCCCAAGAAAAGA+AGG | - | chr1.1:26882733-26882752 | MS.gene65938:intron | 45.0% |
| ! | GTCAGATTGGCTGGTTCAAT+TGG | + | chr1.1:26883465-26883484 | None:intergenic | 45.0% |
| ! | GTTCCCTCGCAATTTTCTCT+CGG | + | chr1.1:26882046-26882065 | None:intergenic | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1.1:26883781-26883800 | MS.gene65938:intron | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | - | chr1.1:26883780-26883799 | MS.gene65938:intron | 45.0% |
| ! | TTCCCTCGCAATTTTCTCTC+GGG | + | chr1.1:26882045-26882064 | None:intergenic | 45.0% |
| !!! | ATTTTTTTGATTTTAAATAA+TGG | - | chr1.1:26881610-26881629 | MS.gene65938:intron | 5.0% |
| !!! | TTTTTTTGATTTTAAATAAT+GGG | - | chr1.1:26881611-26881630 | MS.gene65938:intron | 5.0% |
| AACTGTTAACACCCCAGCTG+GGG | - | chr1.1:26884330-26884349 | MS.gene65938:intron | 50.0% | |
| ACTGAATGGGGTCAGCAACA+TGG | + | chr1.1:26883649-26883668 | None:intergenic | 50.0% | |
| AGCACCACGTTGTTGAACAG+TGG | + | chr1.1:26884744-26884763 | None:intergenic | 50.0% | |
| ATGGAGGGTTTAGGAAGGGA+GGG | - | chr1.1:26883796-26883815 | MS.gene65938:intron | 50.0% | |
| ATTGCTAGGGGAGTGATGCT+CGG | - | chr1.1:26882405-26882424 | MS.gene65938:CDS | 50.0% | |
| CAACTGTTAACACCCCAGCT+GGG | - | chr1.1:26884329-26884348 | MS.gene65938:intron | 50.0% | |
| CAAGAACCCAATCGCGAATG+TGG | + | chr1.1:26884826-26884845 | None:intergenic | 50.0% | |
| CACATTCGCGATTGGGTTCT+TGG | - | chr1.1:26884824-26884843 | MS.gene65938:CDS | 50.0% | |
| CACCCTCATGCCTAAGTTGT+CGG | - | chr1.1:26885225-26885244 | MS.gene65938:intron | 50.0% | |
| CCAGTGACAAGAACACGAAC+TGG | + | chr1.1:26881459-26881478 | None:intergenic | 50.0% | |
| CCAGTTCGTGTTCTTGTCAC+TGG | - | chr1.1:26881456-26881475 | MS.gene65938:CDS | 50.0% | |
| CCATTCAATGACTCTGCTGC+AGG | + | chr1.1:26882471-26882490 | None:intergenic | 50.0% | |
| CCTGCAGCAGAGTCATTGAA+TGG | - | chr1.1:26882468-26882487 | MS.gene65938:CDS | 50.0% | |
| CTTGTGACCACATTCGCGAT+TGG | - | chr1.1:26884816-26884835 | MS.gene65938:CDS | 50.0% | |
| GATGTTGTTGAGGCATGCAC+TGG | - | chr1.1:26882688-26882707 | MS.gene65938:intron | 50.0% | |
| TCACCTGTGCCAATGGTGAA+TGG | - | chr1.1:26885020-26885039 | MS.gene65938:intron | 50.0% | |
| ! | CTGGGGTGTTAACAGTTGCA+TGG | + | chr1.1:26884327-26884346 | None:intergenic | 50.0% |
| ! | GTCGGAAACAAGTTGACGGA+CGG | + | chr1.1:26884362-26884381 | None:intergenic | 50.0% |
| ! | TCGGAAACAAGTTGACGGAC+GGG | + | chr1.1:26884361-26884380 | None:intergenic | 50.0% |
| ! | TGCAGGAGCTTTAATGCACC+GGG | + | chr1.1:26882986-26883005 | None:intergenic | 50.0% |
| !! | GGTGATGAAAGGAGTACCTG+CGG | + | chr1.1:26881484-26881503 | None:intergenic | 50.0% |
| !!! | GTTTTTTGAGGACCCCTTCC+TGG | + | chr1.1:26883019-26883038 | None:intergenic | 50.0% |
| AGGGTTTAGGAAGGGAGGGA+AGG | - | chr1.1:26883800-26883819 | MS.gene65938:intron | 55.0% | |
| CACCATTGGCACAGGTGACA+GGG | + | chr1.1:26885018-26885037 | None:intergenic | 55.0% | |
| CATATGCAGGGTCCAGGAAG+GGG | - | chr1.1:26883004-26883023 | MS.gene65938:CDS | 55.0% | |
| GATGGAGGGTTTAGGAAGGG+AGG | - | chr1.1:26883795-26883814 | MS.gene65938:intron | 55.0% | |
| GCAACTGTTAACACCCCAGC+TGG | - | chr1.1:26884328-26884347 | MS.gene65938:intron | 55.0% | |
| GCATATGCAGGGTCCAGGAA+GGG | - | chr1.1:26883003-26883022 | MS.gene65938:CDS | 55.0% | |
| GGCCCGAGAGAAAATTGCGA+GGG | - | chr1.1:26882040-26882059 | MS.gene65938:intron | 55.0% | |
| GGCTCACTCTTGCCTCTCTT+AGG | - | chr1.1:26885786-26885805 | MS.gene65938:CDS | 55.0% | |
| GGGTTTAGGAAGGGAGGGAA+GGG | - | chr1.1:26883801-26883820 | MS.gene65938:intron | 55.0% | |
| GTTCTTGGAACTCCCCAGGT+TGG | - | chr1.1:26884839-26884858 | MS.gene65938:CDS | 55.0% | |
| TCACCATTGGCACAGGTGAC+AGG | + | chr1.1:26885019-26885038 | None:intergenic | 55.0% | |
| TGCATATGCAGGGTCCAGGA+AGG | - | chr1.1:26883002-26883021 | MS.gene65938:CDS | 55.0% | |
| TGGCCCGAGAGAAAATTGCG+AGG | - | chr1.1:26882039-26882058 | MS.gene65938:intron | 55.0% | |
| TTCCCTGTCACCTGTGCCAA+TGG | - | chr1.1:26885013-26885032 | MS.gene65938:intron | 55.0% | |
| TTCCTGGACCCTGCATATGC+AGG | + | chr1.1:26883003-26883022 | None:intergenic | 55.0% | |
| TTGGGTTCTTGGAACTCCCC+AGG | - | chr1.1:26884835-26884854 | MS.gene65938:CDS | 55.0% | |
| ! | CGGCTTGTTTGCGACTATGC+TGG | - | chr1.1:26883692-26883711 | MS.gene65938:intron | 55.0% |
| ! | GCACTCCACCAAGGAGTATG+AGG | + | chr1.1:26885395-26885414 | None:intergenic | 55.0% |
| CTCCTGCATATGCAGGGTCC+AGG | - | chr1.1:26882998-26883017 | MS.gene65938:CDS | 60.0% | |
| GACAGCCGAAGAGCTGACTG+AGG | - | chr1.1:26885753-26885772 | MS.gene65938:intron | 60.0% | |
| GCATGCTGCTGCCAACTGCA+AGG | - | chr1.1:26882825-26882844 | MS.gene65938:intron | 60.0% | |
| !! | GTTCTTGTCACTGGTGCCGC+AGG | - | chr1.1:26881465-26881484 | MS.gene65938:CDS | 60.0% |
| ! | GACGGGCTTCTCCCCAGCTG+GGG | + | chr1.1:26884344-26884363 | None:intergenic | 70.0% |
| ! | GGACGGGCTTCTCCCCAGCT+GGG | + | chr1.1:26884345-26884364 | None:intergenic | 70.0% |
| ! | CGGACGGGCTTCTCCCCAGC+TGG | + | chr1.1:26884346-26884365 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 26881444 | 26885807 | 26881444 | ID=MS.gene65938 |
| chr1.1 | mRNA | 26881444 | 26885807 | 26881444 | ID=MS.gene65938.t1;Parent=MS.gene65938 |
| chr1.1 | exon | 26885765 | 26885807 | 26885765 | ID=MS.gene65938.t1.exon1;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26885765 | 26885807 | 26885765 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26884717 | 26884875 | 26884717 | ID=MS.gene65938.t1.exon2;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26884717 | 26884875 | 26884717 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26884405 | 26884580 | 26884405 | ID=MS.gene65938.t1.exon3;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26884405 | 26884580 | 26884405 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26882862 | 26883139 | 26882862 | ID=MS.gene65938.t1.exon4;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26882862 | 26883139 | 26882862 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26882395 | 26882530 | 26882395 | ID=MS.gene65938.t1.exon5;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26882395 | 26882530 | 26882395 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26882196 | 26882307 | 26882196 | ID=MS.gene65938.t1.exon6;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26882196 | 26882307 | 26882196 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| chr1.1 | exon | 26881444 | 26881538 | 26881444 | ID=MS.gene65938.t1.exon7;Parent=MS.gene65938.t1 |
| chr1.1 | CDS | 26881444 | 26881538 | 26881444 | ID=cds.MS.gene65938.t1;Parent=MS.gene65938.t1 |
| Gene Sequence |
| Protein sequence |
