Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032247.t1 | O48902.1 | 99.7 | 384 | 1 | 0 | 11 | 394 | 54 | 437 | 8.20E-220 | 772.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032247.t1 | O48902 | 99.7 | 384 | 1 | 0 | 11 | 394 | 54 | 437 | 2.0e-222 | 772.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032247.t1 | A0A072VPJ2 | 97.9 | 384 | 8 | 0 | 11 | 394 | 54 | 437 | 1.6e-217 | 764.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032247 | MS.gene52949 | PPI |
| MS.gene053394 | MS.gene032247 | PPI |
| MS.gene004851 | MS.gene032247 | PPI |
| MS.gene032247 | MS.gene65938 | PPI |
| MS.gene032247 | MS.gene07386 | PPI |
| MS.gene85559 | MS.gene032247 | PPI |
| MS.gene65490 | MS.gene032247 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032247.t1 | MTR_1g090730 | 96.173 | 392 | 15 | 0 | 3 | 394 | 46 | 437 | 0.0 | 785 |
| MS.gene032247.t1 | MTR_1g090730 | 97.697 | 304 | 7 | 0 | 11 | 314 | 54 | 357 | 0.0 | 620 |
| MS.gene032247.t1 | MTR_8g005980 | 42.593 | 324 | 180 | 3 | 49 | 368 | 85 | 406 | 1.89e-76 | 243 |
| MS.gene032247.t1 | MTR_1g076130 | 40.426 | 329 | 189 | 4 | 49 | 373 | 3 | 328 | 3.42e-73 | 231 |
| MS.gene032247.t1 | MTR_1g043040 | 39.818 | 329 | 191 | 4 | 49 | 373 | 3 | 328 | 1.19e-71 | 228 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032247.t1 | AT5G58330 | 85.496 | 393 | 56 | 1 | 3 | 394 | 50 | 442 | 0.0 | 690 |
| MS.gene032247.t1 | AT5G58330 | 86.340 | 388 | 52 | 1 | 8 | 394 | 56 | 443 | 0.0 | 689 |
| MS.gene032247.t1 | AT5G58330 | 89.222 | 334 | 35 | 1 | 62 | 394 | 1 | 334 | 0.0 | 615 |
| MS.gene032247.t1 | AT5G56720 | 41.049 | 324 | 185 | 3 | 49 | 368 | 42 | 363 | 9.11e-72 | 229 |
| MS.gene032247.t1 | AT1G04410 | 41.104 | 326 | 182 | 4 | 49 | 368 | 3 | 324 | 1.21e-71 | 228 |
| MS.gene032247.t1 | AT5G43330 | 41.104 | 326 | 182 | 4 | 49 | 368 | 3 | 324 | 7.05e-71 | 226 |
Find 102 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTGCTCTGAAATTATT+AGG | 0.203572 | 1.1:-66242121 | MS.gene032247:CDS |
| GCGGCTTTGCTAGACATAAA+TGG | 0.224890 | 1.1:-66241812 | MS.gene032247:CDS |
| GCAGACAGAAGCTGAGTTAT+TGG | 0.228607 | 1.1:-66240276 | MS.gene032247:intron |
| AAGTGTCAAATATGACAATA+TGG | 0.242700 | 1.1:-66241309 | MS.gene032247:CDS |
| GACGGGCAACCCATCGATTC+TGG | 0.258257 | 1.1:+66241246 | None:intergenic |
| TTCAGAGCAATAGGTTGATT+TGG | 0.265247 | 1.1:+66242130 | None:intergenic |
| CTGCCTTACCTATGATTTGA+AGG | 0.303691 | 1.1:-66243802 | MS.gene032247:CDS |
| CCTAATAATTTCAGAGCAAT+AGG | 0.307670 | 1.1:+66242121 | None:intergenic |
| GCAGAATGGGCTTTGCTAAT+AGG | 0.308960 | 1.1:-66241866 | MS.gene032247:CDS |
| CGTAGAAGACACCTGCCTTC+AGG | 0.314755 | 1.1:+66241335 | None:intergenic |
| ATAAAACTTTGACTTGTTGT+AGG | 0.335543 | 1.1:+66244664 | None:intergenic |
| TATACCACTGGAAATCCTTA+TGG | 0.344085 | 1.1:-66240652 | MS.gene032247:CDS |
| AATGGTAATTAATTTCTTCC+AGG | 0.347857 | 1.1:+66242327 | None:intergenic |
| AAGTGATCAAGGATCATAAA+TGG | 0.368193 | 1.1:-66241219 | MS.gene032247:CDS |
| CAATATTTACCTCGCCGGTT+AGG | 0.371646 | 1.1:+66240231 | None:intergenic |
| GCAAAGCCCATTCTGCATCT+TGG | 0.385116 | 1.1:+66241873 | None:intergenic |
| AAAGCCGCACGCTCCATTCC+AGG | 0.399549 | 1.1:+66241827 | None:intergenic |
| ATTAATTACCATTGCAGTCT+CGG | 0.405725 | 1.1:-66242317 | MS.gene032247:CDS |
| GTAGAAGACACCTGCCTTCA+GGG | 0.407624 | 1.1:+66241336 | None:intergenic |
| CACCTTGAAAAGTAGATGAT+TGG | 0.408340 | 1.1:+66242276 | None:intergenic |
| ATTCTGGCATTTAAGAAGTC+AGG | 0.412554 | 1.1:+66241262 | None:intergenic |
| CGGCTTTGCTAGACATAAAT+GGG | 0.422655 | 1.1:-66241811 | MS.gene032247:CDS |
| ATTGCAGTCTCGGGTGCTGC+TGG | 0.423582 | 1.1:-66242307 | MS.gene032247:CDS |
| AAATGTGTGGCTCACCTAAC+CGG | 0.423595 | 1.1:-66240245 | MS.gene032247:CDS |
| TTCCTACTCCCGAGGGTGAT+TGG | 0.424558 | 1.1:-66240974 | MS.gene032247:CDS |
| TAACTCGTTTAGATGAGAAC+AGG | 0.428132 | 1.1:-66241470 | MS.gene032247:CDS |
| TTCTTAAATGCCAGAATCGA+TGG | 0.429266 | 1.1:-66241256 | MS.gene032247:CDS |
| ATCCTTGATCACTTCTTTGA+CGG | 0.429838 | 1.1:+66241228 | None:intergenic |
| AGTGTCAAATATGACAATAT+GGG | 0.441799 | 1.1:-66241308 | MS.gene032247:CDS |
| CAAGGATCATAAATGGTTAG+AGG | 0.443116 | 1.1:-66241212 | MS.gene032247:CDS |
| TGAGAACAGGGCAAAATGTC+AGG | 0.444147 | 1.1:-66241457 | MS.gene032247:intron |
| TATTAGCATTGATCCTTATG+AGG | 0.445684 | 1.1:-66241900 | MS.gene032247:CDS |
| GCATCTTGGAACACCTCATA+AGG | 0.449712 | 1.1:+66241887 | None:intergenic |
| ACTCACAGCCTTCAAATCAT+AGG | 0.450924 | 1.1:+66243794 | None:intergenic |
| GGATCCTGTGTCTGTACAGC+TGG | 0.461686 | 1.1:+66243855 | None:intergenic |
| TCCTTGATCACTTCTTTGAC+GGG | 0.461687 | 1.1:+66241229 | None:intergenic |
| ATATCTTCAGCTATTCCATA+AGG | 0.466564 | 1.1:+66240637 | None:intergenic |
| TTAGCTAGTTACATTTCTCC+TGG | 0.468553 | 1.1:+66240074 | None:intergenic |
| TTAATTACCATTGCAGTCTC+GGG | 0.472464 | 1.1:-66242316 | MS.gene032247:CDS |
| TGCTCTGAAATTATTAGGAT+CGG | 0.475625 | 1.1:-66242116 | MS.gene032247:CDS |
| CAGAAGACACCATAGCAATC+AGG | 0.479428 | 1.1:+66243822 | None:intergenic |
| AATGTCAAAGTTATAGTTGT+GGG | 0.482938 | 1.1:-66241651 | MS.gene032247:CDS |
| ATAGCAATCAGGCTTACTCT+TGG | 0.486336 | 1.1:+66243833 | None:intergenic |
| GGTGCAAAGCCTCGAGGACC+TGG | 0.489357 | 1.1:-66241845 | MS.gene032247:CDS |
| CAAGCTGACTTTGTATTGCA+AGG | 0.493060 | 1.1:+66241624 | None:intergenic |
| AACTTTGACTTGTTGTAGGA+GGG | 0.493839 | 1.1:+66244668 | None:intergenic |
| TAGCAATCAGGCTTACTCTT+GGG | 0.494853 | 1.1:+66243834 | None:intergenic |
| GGTGTTCCAAGATGCAGAAT+GGG | 0.508422 | 1.1:-66241879 | MS.gene032247:CDS |
| CTCTTTATTTCCTTTGCTGA+GGG | 0.509334 | 1.1:-66241930 | MS.gene032247:CDS |
| AAACTTTGACTTGTTGTAGG+AGG | 0.521879 | 1.1:+66244667 | None:intergenic |
| AGGTGTTCCAAGATGCAGAA+TGG | 0.523630 | 1.1:-66241880 | MS.gene032247:CDS |
| CAGTATGCCGTGTCGATCAA+AGG | 0.525529 | 1.1:-66240608 | MS.gene032247:intron |
| CAATGCCAGGTGTATACCAC+TGG | 0.532941 | 1.1:-66240664 | MS.gene032247:intron |
| ACTTTGACTTGTTGTAGGAG+GGG | 0.541411 | 1.1:+66244669 | None:intergenic |
| CCTTGGCTAATTTCTGTCGT+AGG | 0.542771 | 1.1:+66240459 | None:intergenic |
| ACTCTTTATTTCCTTTGCTG+AGG | 0.543885 | 1.1:-66241931 | MS.gene032247:CDS |
| AGGTCATTGCAAGCTCTTGA+AGG | 0.545237 | 1.1:-66242091 | MS.gene032247:intron |
| AGGAAGAGGAGACAAAATCC+TGG | 0.546374 | 1.1:-66242345 | MS.gene032247:CDS |
| AAGCTGACTTTGTATTGCAA+GGG | 0.548231 | 1.1:+66241625 | None:intergenic |
| TTGTTTGATTGTTAGAGAGG+TGG | 0.548629 | 1.1:-66241077 | MS.gene032247:intron |
| GGCCGCAATATTTACCTCGC+CGG | 0.551341 | 1.1:+66240226 | None:intergenic |
| TTACATTTCTCCTGGGAGCA+TGG | 0.551522 | 1.1:+66240082 | None:intergenic |
| GCCCGTCAAAGAAGTGATCA+AGG | 0.552804 | 1.1:-66241230 | MS.gene032247:CDS |
| CCTGGGAGCATGGTATCACC+AGG | 0.553980 | 1.1:+66240092 | None:intergenic |
| CAGCCTTCAAATCATAGGTA+AGG | 0.557569 | 1.1:+66243799 | None:intergenic |
| CATCTAAACGAGTTAAAGCA+TGG | 0.559378 | 1.1:+66241478 | None:intergenic |
| AGGAATGATCAAAGATCGTA+TGG | 0.561984 | 1.1:+66240992 | None:intergenic |
| CAATGTGTAGCTAGCCCTGA+AGG | 0.566385 | 1.1:-66241350 | MS.gene032247:intron |
| AAGAGTAAGCCTGATTGCTA+TGG | 0.566462 | 1.1:-66243831 | MS.gene032247:CDS |
| CGCTCCATTCCAGGTCCTCG+AGG | 0.567002 | 1.1:+66241836 | None:intergenic |
| TAGCTAGTTACATTTCTCCT+GGG | 0.567890 | 1.1:+66240075 | None:intergenic |
| ATTGCTGTTTGTGATCTACC+TGG | 0.568507 | 1.1:-66240110 | MS.gene032247:CDS |
| GTGTAGCTAGCCCTGAAGGC+AGG | 0.575889 | 1.1:-66241346 | MS.gene032247:intron |
| CCTGGTGATACCATGCTCCC+AGG | 0.576358 | 1.1:-66240092 | MS.gene032247:CDS |
| TCTTAAATGCCAGAATCGAT+GGG | 0.577340 | 1.1:-66241255 | MS.gene032247:CDS |
| TTTGATCATTCCTACTCCCG+AGG | 0.577680 | 1.1:-66240982 | MS.gene032247:CDS |
| CAACAATGCAGGTGTTGCGA+TGG | 0.584262 | 1.1:-66241963 | MS.gene032247:intron |
| AACCAATCACCCTCGGGAGT+AGG | 0.588155 | 1.1:+66240972 | None:intergenic |
| AAAGCCTCGAGGACCTGGAA+TGG | 0.591306 | 1.1:-66241840 | MS.gene032247:CDS |
| TGCAGGTGTTGCGATGGAGT+TGG | 0.591881 | 1.1:-66241957 | MS.gene032247:intron |
| CAATGTCAAAGTTATAGTTG+TGG | 0.593051 | 1.1:-66241652 | MS.gene032247:CDS |
| TGAAATTATTAGGATCGGAA+AGG | 0.596316 | 1.1:-66242111 | MS.gene032247:CDS |
| TTCTGGCATTTAAGAAGTCA+GGG | 0.596329 | 1.1:+66241263 | None:intergenic |
| ATAACAACTTCCCTCAGCAA+AGG | 0.605246 | 1.1:+66241920 | None:intergenic |
| AGTAGAAAACCAATCACCCT+CGG | 0.605810 | 1.1:+66240965 | None:intergenic |
| AGGTGTTGCGATGGAGTTGG+AGG | 0.609283 | 1.1:-66241954 | MS.gene032247:CDS |
| GTGTCAAATATGACAATATG+GGG | 0.610500 | 1.1:-66241307 | MS.gene032247:CDS |
| GGGAAACCACTCAACTACTC+AGG | 0.614384 | 1.1:-66241287 | MS.gene032247:CDS |
| GTAGAAAACCAATCACCCTC+GGG | 0.619646 | 1.1:+66240966 | None:intergenic |
| AACTCGTTTAGATGAGAACA+GGG | 0.621950 | 1.1:-66241469 | MS.gene032247:CDS |
| TTGATCATTCCTACTCCCGA+GGG | 0.629643 | 1.1:-66240981 | MS.gene032247:CDS |
| CAGGGACCTGAGTAGTTGAG+TGG | 0.629977 | 1.1:+66241281 | None:intergenic |
| AGCAGCACCCGAGACTGCAA+TGG | 0.640432 | 1.1:+66242309 | None:intergenic |
| TGGTGATTATGAACTTGTCA+AGG | 0.654428 | 1.1:-66240501 | MS.gene032247:CDS |
| ACACTTGCCTTTGATCGACA+CGG | 0.659090 | 1.1:+66240601 | None:intergenic |
| GGTGCCAGCTGTACAGACAC+AGG | 0.672337 | 1.1:-66243859 | MS.gene032247:CDS |
| CTAATAGGTGCAAAGCCTCG+AGG | 0.681429 | 1.1:-66241851 | MS.gene032247:CDS |
| AGGACCTGGAATGGAGCGTG+CGG | 0.691301 | 1.1:-66241831 | MS.gene032247:CDS |
| TATTCCATAAGGATTTCCAG+TGG | 0.701953 | 1.1:+66240648 | None:intergenic |
| CCTACGACAGAAATTAGCCA+AGG | 0.707374 | 1.1:-66240459 | MS.gene032247:intron |
| TGTGGCTCACCTAACCGGCG+AGG | 0.716043 | 1.1:-66240240 | MS.gene032247:intron |
| ACAGGGAAAAGCACTCAATG+CGG | 0.748480 | 1.1:-66241685 | MS.gene032247:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTGCAATTTTAAATTAAT+AGG | + | chr1.1:66241439-66241458 | None:intergenic | 15.0% |
| !!! | ACAAAAAGTTTTATTCATTA+GGG | - | chr1.1:66244241-66244260 | MS.gene032247:intron | 15.0% |
| !!! | TATTAATTTAAAATTGCAGT+TGG | - | chr1.1:66241438-66241457 | MS.gene032247:intron | 15.0% |
| !! | AACATAAAAAATTAACTCAG+TGG | + | chr1.1:66242592-66242611 | None:intergenic | 20.0% |
| !! | AAGAAAATGAGAAAAGATAT+AGG | + | chr1.1:66240532-66240551 | None:intergenic | 20.0% |
| !! | AATCCATGTAATTAAATATG+TGG | - | chr1.1:66243622-66243641 | MS.gene032247:intron | 20.0% |
| !! | AATGAAATTACGTATTTGTT+GGG | + | chr1.1:66240296-66240315 | None:intergenic | 20.0% |
| !! | ACAATCCTTCAAAAAAAAAA+AGG | + | chr1.1:66240201-66240220 | None:intergenic | 20.0% |
| !! | ACATTATTCAGTGTAATTAT+AGG | - | chr1.1:66241267-66241286 | MS.gene032247:CDS | 20.0% |
| !! | ACTAAATCATTTGTTTCATT+TGG | - | chr1.1:66242318-66242337 | MS.gene032247:CDS | 20.0% |
| !! | ATATACTATATAGATAGAAG+TGG | - | chr1.1:66241931-66241950 | MS.gene032247:CDS | 20.0% |
| !! | ATTAATATATTCACCAATGT+CGG | - | chr1.1:66243927-66243946 | MS.gene032247:intron | 20.0% |
| !! | ATTCCACATATTTAATTACA+TGG | + | chr1.1:66243628-66243647 | None:intergenic | 20.0% |
| !! | CAAAAGGTAAAATTTGTAAT+TGG | - | chr1.1:66243599-66243618 | MS.gene032247:intron | 20.0% |
| !! | CATCTATATATACAATGATT+AGG | + | chr1.1:66241173-66241192 | None:intergenic | 20.0% |
| !! | CGATAACAATTTCATATATT+TGG | - | chr1.1:66244362-66244381 | MS.gene032247:intron | 20.0% |
| !! | GGTTAATATGTTCTTTAATT+GGG | - | chr1.1:66241092-66241111 | MS.gene032247:intron | 20.0% |
| !! | GTATTTACTTGATATAGAAT+TGG | - | chr1.1:66243858-66243877 | MS.gene032247:CDS | 20.0% |
| !! | TATTGTTAACTTATTACACA+AGG | + | chr1.1:66243666-66243685 | None:intergenic | 20.0% |
| !! | TCATTAATTCTTATTCTTAC+TGG | - | chr1.1:66241349-66241368 | MS.gene032247:intron | 20.0% |
| !! | TGGTTAATATGTTCTTTAAT+TGG | - | chr1.1:66241091-66241110 | MS.gene032247:intron | 20.0% |
| !! | TTTATGAAGAAGTTTCTAAA+AGG | + | chr1.1:66240559-66240578 | None:intergenic | 20.0% |
| !!! | AAATTTTTTGCAGGAATATT+TGG | + | chr1.1:66243270-66243289 | None:intergenic | 20.0% |
| !!! | AACTTTAAAGCTCAATTAAA+AGG | - | chr1.1:66244006-66244025 | MS.gene032247:intron | 20.0% |
| !!! | AATAAAACTTTTTGTCATAG+AGG | + | chr1.1:66244236-66244255 | None:intergenic | 20.0% |
| !!! | CTCACCAAAAATTTAAAATT+TGG | + | chr1.1:66241740-66241759 | None:intergenic | 20.0% |
| !!! | GACAAAAAGTTTTATTCATT+AGG | - | chr1.1:66244240-66244259 | MS.gene032247:intron | 20.0% |
| !!! | GGTTCCAAATTTTAAATTTT+TGG | - | chr1.1:66241733-66241752 | MS.gene032247:intron | 20.0% |
| !!! | TATAGTTAACTGTCTTTTAT+AGG | + | chr1.1:66243033-66243052 | None:intergenic | 20.0% |
| !!! | TTATGAAGAAGTTTCTAAAA+GGG | + | chr1.1:66240558-66240577 | None:intergenic | 20.0% |
| ! | AAGCAATTCAGAAATCATAA+AGG | + | chr1.1:66244208-66244227 | None:intergenic | 25.0% |
| ! | AAGTGTCAAATATGACAATA+TGG | - | chr1.1:66243459-66243478 | MS.gene032247:intron | 25.0% |
| ! | AATACCATGGAAAATTTGAA+AGG | + | chr1.1:66242347-66242366 | None:intergenic | 25.0% |
| ! | AATGGTAATTAATTTCTTCC+AGG | + | chr1.1:66242444-66242463 | None:intergenic | 25.0% |
| ! | AATGTCAAAGTTATAGTTGT+GGG | - | chr1.1:66243117-66243136 | MS.gene032247:intron | 25.0% |
| ! | AGTGTCAAATATGACAATAT+GGG | - | chr1.1:66243460-66243479 | MS.gene032247:intron | 25.0% |
| ! | ATAAATACAGTAGAGTAACA+AGG | + | chr1.1:66241003-66241022 | None:intergenic | 25.0% |
| ! | ATGTTCTTTAATTGGGTATT+TGG | - | chr1.1:66241099-66241118 | MS.gene032247:intron | 25.0% |
| ! | ATTGTAACAAGTATCCTTTA+TGG | - | chr1.1:66242196-66242215 | MS.gene032247:intron | 25.0% |
| ! | ATTTGTATTCTCTCTTATCA+GGG | - | chr1.1:66244634-66244653 | MS.gene032247:intron | 25.0% |
| ! | CAAAGACAAAAACAGTTTAT+AGG | + | chr1.1:66244032-66244051 | None:intergenic | 25.0% |
| ! | CTATATCAAGTAAATACACA+AGG | + | chr1.1:66243855-66243874 | None:intergenic | 25.0% |
| ! | CTTAACATTAAGTAATACCA+TGG | + | chr1.1:66242360-66242379 | None:intergenic | 25.0% |
| ! | GAAATTCAAACTTTGACATT+AGG | + | chr1.1:66240152-66240171 | None:intergenic | 25.0% |
| ! | GAATGAAATTACGTATTTGT+TGG | + | chr1.1:66240297-66240316 | None:intergenic | 25.0% |
| ! | TGTTCTTTAATTGGGTATTT+GGG | - | chr1.1:66241100-66241119 | MS.gene032247:intron | 25.0% |
| ! | TTAATATATTCACCAATGTC+GGG | - | chr1.1:66243928-66243947 | MS.gene032247:intron | 25.0% |
| ! | TTATTGTTTGATTGTTAGAG+AGG | - | chr1.1:66243688-66243707 | MS.gene032247:intron | 25.0% |
| ! | TTGTAACAAGTATCCTTTAT+GGG | - | chr1.1:66242197-66242216 | MS.gene032247:intron | 25.0% |
| !! | ATATACCAATTTGTTTCGTT+TGG | - | chr1.1:66242387-66242406 | MS.gene032247:intron | 25.0% |
| !! | ATGAAATTACGTATTTGTTG+GGG | + | chr1.1:66240295-66240314 | None:intergenic | 25.0% |
| !! | GATTTTCCTCAAATATTTGT+TGG | + | chr1.1:66242167-66242186 | None:intergenic | 25.0% |
| !! | GGATTTGAAATACAAGTATA+AGG | + | chr1.1:66240428-66240447 | None:intergenic | 25.0% |
| !!! | AAATATTTGTTGGAAGCATT+AGG | + | chr1.1:66242157-66242176 | None:intergenic | 25.0% |
| !!! | AATTTTGTTATAAGGAGGAT+TGG | - | chr1.1:66241128-66241147 | MS.gene032247:intron | 25.0% |
| !!! | ATAAAACTTTGACTTGTTGT+AGG | + | chr1.1:66240107-66240126 | None:intergenic | 25.0% |
| !!! | TTCGACCTTTTTTTTTTTGA+AGG | - | chr1.1:66240193-66240212 | MS.gene032247:intron | 25.0% |
| !!! | TTCTGTTATTTCTTCTTCTT+TGG | + | chr1.1:66243375-66243394 | None:intergenic | 25.0% |
| !!! | TTCTTGAATTCTAAGATTCT+TGG | - | chr1.1:66240629-66240648 | MS.gene032247:CDS | 25.0% |
| !!! | TTTGAAAAGCATCAGTAATA+TGG | + | chr1.1:66242770-66242789 | None:intergenic | 25.0% |
| AAAGGCTTCAAGAACATTAT+TGG | - | chr1.1:66242074-66242093 | MS.gene032247:intron | 30.0% | |
| AAATACAAGTATAAGGCTGT+GGG | + | chr1.1:66240421-66240440 | None:intergenic | 30.0% | |
| AAGTGATCAAGGATCATAAA+TGG | - | chr1.1:66243549-66243568 | MS.gene032247:intron | 30.0% | |
| AAGTGTAGAAGGAAGAAAAA+AGG | + | chr1.1:66240475-66240494 | None:intergenic | 30.0% | |
| AGATAGAAGTGGAACTAAAT+TGG | - | chr1.1:66241942-66241961 | MS.gene032247:CDS | 30.0% | |
| ATATCTTCAGCTATTCCATA+AGG | + | chr1.1:66244134-66244153 | None:intergenic | 30.0% | |
| ATGCTTCCAACAAATATTTG+AGG | - | chr1.1:66242158-66242177 | MS.gene032247:intron | 30.0% | |
| ATGTTCTAATTCAACAATGC+AGG | - | chr1.1:66242794-66242813 | MS.gene032247:intron | 30.0% | |
| ATTAATTACCATTGCAGTCT+CGG | - | chr1.1:66242451-66242470 | MS.gene032247:intron | 30.0% | |
| ATTGCAGTTGGTTAATATAC+AGG | - | chr1.1:66241450-66241469 | MS.gene032247:intron | 30.0% | |
| CAATGTCAAAGTTATAGTTG+TGG | - | chr1.1:66243116-66243135 | MS.gene032247:intron | 30.0% | |
| CATTTGTATTCTCTCTTATC+AGG | - | chr1.1:66244633-66244652 | MS.gene032247:intron | 30.0% | |
| CCTAATAATTTCAGAGCAAT+AGG | + | chr1.1:66242650-66242669 | None:intergenic | 30.0% | |
| CTGCATTAAAATACACATGA+AGG | + | chr1.1:66243222-66243241 | None:intergenic | 30.0% | |
| CTTGACTAAAAAGTAAAAGC+AGG | + | chr1.1:66240885-66240904 | None:intergenic | 30.0% | |
| CTTGCTTTGTATTCAACTTA+TGG | - | chr1.1:66241050-66241069 | MS.gene032247:CDS | 30.0% | |
| GAAGATAAAAAACCAAGTTG+TGG | - | chr1.1:66240355-66240374 | MS.gene032247:intron | 30.0% | |
| GTGATCTTCAATTACATGTA+CGG | + | chr1.1:66241807-66241826 | None:intergenic | 30.0% | |
| GTGTCAAATATGACAATATG+GGG | - | chr1.1:66243461-66243480 | MS.gene032247:intron | 30.0% | |
| GTTCACTGAAAAAGTTCAAA+AGG | - | chr1.1:66243583-66243602 | MS.gene032247:intron | 30.0% | |
| TAATGCATTTACCAATGTTC+AGG | + | chr1.1:66244440-66244459 | None:intergenic | 30.0% | |
| TAGCAACATTAGGAACAATA+AGG | + | chr1.1:66243198-66243217 | None:intergenic | 30.0% | |
| TCCATAAATGATGATTGAGA+GGG | - | chr1.1:66241638-66241657 | MS.gene032247:CDS | 30.0% | |
| TCTCAAATTATTATCCGTGT+CGG | + | chr1.1:66241242-66241261 | None:intergenic | 30.0% | |
| TGAAATTATTAGGATCGGAA+AGG | - | chr1.1:66242657-66242676 | MS.gene032247:intron | 30.0% | |
| TGAAGATCACACTACAATTA+AGG | - | chr1.1:66241817-66241836 | MS.gene032247:CDS | 30.0% | |
| TGGTGCACTTATTCAAAAAT+GGG | - | chr1.1:66243711-66243730 | MS.gene032247:intron | 30.0% | |
| TGTATCTAGAGGAGTTAATA+TGG | + | chr1.1:66242280-66242299 | None:intergenic | 30.0% | |
| TTCTTCTTACGAGACATTAT+TGG | + | chr1.1:66240338-66240357 | None:intergenic | 30.0% | |
| TTGCAGTTGGTTAATATACA+GGG | - | chr1.1:66241451-66241470 | MS.gene032247:intron | 30.0% | |
| TTGTGTCAATTAAGCTTCTT+GGG | - | chr1.1:66240845-66240864 | MS.gene032247:intron | 30.0% | |
| TTTGTATTCTCTCTTATCAG+GGG | - | chr1.1:66244635-66244654 | MS.gene032247:intron | 30.0% | |
| TTTGTGTCAATTAAGCTTCT+TGG | - | chr1.1:66240844-66240863 | MS.gene032247:intron | 30.0% | |
| ! | AAAACCAATTGATAGCCAAA+AGG | - | chr1.1:66242056-66242075 | MS.gene032247:intron | 30.0% |
| ! | ATAATGTTCTTGAAGCCTTT+TGG | + | chr1.1:66242074-66242093 | None:intergenic | 30.0% |
| ! | ATCTGAAGCATATTGTGATT+TGG | - | chr1.1:66241710-66241729 | MS.gene032247:intron | 30.0% |
| ! | GGTTAATTGTGTTTGAGATA+AGG | + | chr1.1:66240230-66240249 | None:intergenic | 30.0% |
| ! | TACGAGACATTATTGGATTT+TGG | + | chr1.1:66240331-66240350 | None:intergenic | 30.0% |
| ! | TAGCAGTTTAGGATCAAATA+TGG | - | chr1.1:66242229-66242248 | MS.gene032247:intron | 30.0% |
| ! | TATATGAAAATGCCCGTTTT+TGG | - | chr1.1:66242720-66242739 | MS.gene032247:intron | 30.0% |
| ! | TCTGAAGCATATTGTGATTT+GGG | - | chr1.1:66241711-66241730 | MS.gene032247:intron | 30.0% |
| ! | TTGGATTTTGGATGAATGAA+TGG | + | chr1.1:66240319-66240338 | None:intergenic | 30.0% |
| ! | TTTCCACGTGTTTTCTTTTA+GGG | + | chr1.1:66240252-66240271 | None:intergenic | 30.0% |
| ! | TTTTCCACGTGTTTTCTTTT+AGG | + | chr1.1:66240253-66240272 | None:intergenic | 30.0% |
| !! | AAGAGTAAAGTTACTGACTT+TGG | + | chr1.1:66240813-66240832 | None:intergenic | 30.0% |
| !! | AATTCTAAGATTCTTGGACA+TGG | - | chr1.1:66240635-66240654 | MS.gene032247:CDS | 30.0% |
| !! | AGCAGAATTTTGTTATAAGG+AGG | - | chr1.1:66241123-66241142 | MS.gene032247:intron | 30.0% |
| !! | CAAATGATTTAGTTCTGAGA+CGG | + | chr1.1:66242311-66242330 | None:intergenic | 30.0% |
| !! | CCTATTGCTCTGAAATTATT+AGG | - | chr1.1:66242647-66242666 | MS.gene032247:intron | 30.0% |
| !! | TATTAGCATTGATCCTTATG+AGG | - | chr1.1:66242868-66242887 | MS.gene032247:intron | 30.0% |
| !! | TGCTCTGAAATTATTAGGAT+CGG | - | chr1.1:66242652-66242671 | MS.gene032247:intron | 30.0% |
| !! | TTCCAATCATCTACTTTTCA+AGG | - | chr1.1:66242490-66242509 | MS.gene032247:intron | 30.0% |
| !!! | AAAGCATGGAAATTTTTTGC+AGG | + | chr1.1:66243279-66243298 | None:intergenic | 30.0% |
| !!! | AGTTTTATTCATTAGGGAGA+TGG | - | chr1.1:66244247-66244266 | MS.gene032247:intron | 30.0% |
| !!! | TTTACTTTTTAGTCAAGTGC+AGG | - | chr1.1:66240888-66240907 | MS.gene032247:intron | 30.0% |
| !!! | TTTTTATGTTAGCTTGCATC+TGG | - | chr1.1:66242602-66242621 | MS.gene032247:intron | 30.0% |
| AAACTAAAACTCTGGTATGG+GGG | + | chr1.1:66241616-66241635 | None:intergenic | 35.0% | |
| AACTCGTTTAGATGAGAACA+GGG | - | chr1.1:66243299-66243318 | MS.gene032247:intron | 35.0% | |
| ACATGAAGGTTAGCAACATT+AGG | + | chr1.1:66243208-66243227 | None:intergenic | 35.0% | |
| AGCAAACTAAAACTCTGGTA+TGG | + | chr1.1:66241619-66241638 | None:intergenic | 35.0% | |
| AGGAATGATCAAAGATCGTA+TGG | + | chr1.1:66243779-66243798 | None:intergenic | 35.0% | |
| AGTAAACATCATCCACAACT+TGG | + | chr1.1:66240370-66240389 | None:intergenic | 35.0% | |
| ATACACGCATACTCCAAAAA+CGG | + | chr1.1:66242736-66242755 | None:intergenic | 35.0% | |
| ATCCTTGATCACTTCTTTGA+CGG | + | chr1.1:66243543-66243562 | None:intergenic | 35.0% | |
| ATCTAGAGGAGTTAATATGG+AGG | + | chr1.1:66242277-66242296 | None:intergenic | 35.0% | |
| ATCTTACCATGTGTACAACA+GGG | - | chr1.1:66243066-66243085 | MS.gene032247:intron | 35.0% | |
| ATTCTGGCATTTAAGAAGTC+AGG | + | chr1.1:66243509-66243528 | None:intergenic | 35.0% | |
| ATTGGCCAAACGAAACAAAT+TGG | + | chr1.1:66242395-66242414 | None:intergenic | 35.0% | |
| CAAACTAAAACTCTGGTATG+GGG | + | chr1.1:66241617-66241636 | None:intergenic | 35.0% | |
| CAAGGATCATAAATGGTTAG+AGG | - | chr1.1:66243556-66243575 | MS.gene032247:intron | 35.0% | |
| CACAAACTGAACAAAAGAGT+AGG | + | chr1.1:66242002-66242021 | None:intergenic | 35.0% | |
| CACAATTGAGAGACTGTTAA+AGG | - | chr1.1:66241671-66241690 | MS.gene032247:CDS | 35.0% | |
| CACCTTGAAAAGTAGATGAT+TGG | + | chr1.1:66242495-66242514 | None:intergenic | 35.0% | |
| CATCTAAACGAGTTAAAGCA+TGG | + | chr1.1:66243293-66243312 | None:intergenic | 35.0% | |
| CCATAAATGATGATTGAGAG+GGG | - | chr1.1:66241639-66241658 | MS.gene032247:CDS | 35.0% | |
| CTAAATTGCATGGCCATTAA+AGG | + | chr1.1:66242567-66242586 | None:intergenic | 35.0% | |
| CTCCATAAATGATGATTGAG+AGG | - | chr1.1:66241637-66241656 | MS.gene032247:CDS | 35.0% | |
| CTGAAGCATATTGTGATTTG+GGG | - | chr1.1:66241712-66241731 | MS.gene032247:intron | 35.0% | |
| GAAATACAAGTATAAGGCTG+TGG | + | chr1.1:66240422-66240441 | None:intergenic | 35.0% | |
| GCAAACTAAAACTCTGGTAT+GGG | + | chr1.1:66241618-66241637 | None:intergenic | 35.0% | |
| GGTGCACTTATTCAAAAATG+GGG | - | chr1.1:66243712-66243731 | MS.gene032247:intron | 35.0% | |
| GTAGAAGGAAGAAAAAAGGA+GGG | + | chr1.1:66240471-66240490 | None:intergenic | 35.0% | |
| GTGGTGCACTTATTCAAAAA+TGG | - | chr1.1:66243710-66243729 | MS.gene032247:intron | 35.0% | |
| TAACTCGTTTAGATGAGAAC+AGG | - | chr1.1:66243298-66243317 | MS.gene032247:intron | 35.0% | |
| TAATATACAGGGATAGAGGT+CGG | - | chr1.1:66241462-66241481 | MS.gene032247:CDS | 35.0% | |
| TAATGACATCCTATGAAGCA+CGG | + | chr1.1:66241335-66241354 | None:intergenic | 35.0% | |
| TATACCACTGGAAATCCTTA+TGG | - | chr1.1:66244116-66244135 | MS.gene032247:intron | 35.0% | |
| TATCTTACCATGTGTACAAC+AGG | - | chr1.1:66243065-66243084 | MS.gene032247:intron | 35.0% | |
| TATGGAGCAAACTAAAACTC+TGG | + | chr1.1:66241624-66241643 | None:intergenic | 35.0% | |
| TATTCCATAAGGATTTCCAG+TGG | + | chr1.1:66244123-66244142 | None:intergenic | 35.0% | |
| TCTTAAATGCCAGAATCGAT+GGG | - | chr1.1:66243513-66243532 | MS.gene032247:intron | 35.0% | |
| TGGTGATTATGAACTTGTCA+AGG | - | chr1.1:66244267-66244286 | MS.gene032247:intron | 35.0% | |
| TGGTTAATATACAGGGATAG+AGG | - | chr1.1:66241458-66241477 | MS.gene032247:CDS | 35.0% | |
| TGTAGAAGGAAGAAAAAAGG+AGG | + | chr1.1:66240472-66240491 | None:intergenic | 35.0% | |
| TTAATTACCATTGCAGTCTC+GGG | - | chr1.1:66242452-66242471 | MS.gene032247:intron | 35.0% | |
| TTCAAGAAACGCTAAGTTTG+TGG | + | chr1.1:66240617-66240636 | None:intergenic | 35.0% | |
| TTCTGGCATTTAAGAAGTCA+GGG | + | chr1.1:66243508-66243527 | None:intergenic | 35.0% | |
| TTCTTAAATGCCAGAATCGA+TGG | - | chr1.1:66243512-66243531 | MS.gene032247:intron | 35.0% | |
| TTGCAATTACATACAATGCC+AGG | - | chr1.1:66244091-66244110 | MS.gene032247:intron | 35.0% | |
| TTGTTTGATTGTTAGAGAGG+TGG | - | chr1.1:66243691-66243710 | MS.gene032247:intron | 35.0% | |
| ! | AAGAAAAAAGGAGGGTATGT+GGG | + | chr1.1:66240463-66240482 | None:intergenic | 35.0% |
| ! | AAGCTGACTTTGTATTGCAA+GGG | + | chr1.1:66243146-66243165 | None:intergenic | 35.0% |
| ! | ACTCTTTATTTCCTTTGCTG+AGG | - | chr1.1:66242837-66242856 | MS.gene032247:intron | 35.0% |
| ! | CATAAATGGGCAGATTTTTG+CGG | - | chr1.1:66242970-66242989 | MS.gene032247:intron | 35.0% |
| ! | CTCTTTATTTCCTTTGCTGA+GGG | - | chr1.1:66242838-66242857 | MS.gene032247:intron | 35.0% |
| ! | GCATCCTTTCAAATTTTCCA+TGG | - | chr1.1:66242340-66242359 | MS.gene032247:CDS | 35.0% |
| ! | TGTAATTATAGGTGTCGTGT+CGG | - | chr1.1:66241278-66241297 | MS.gene032247:CDS | 35.0% |
| ! | TTCCACGTGTTTTCTTTTAG+GGG | + | chr1.1:66240251-66240270 | None:intergenic | 35.0% |
| ! | TTGATGAAGAGAAGTGTAGA+AGG | + | chr1.1:66240486-66240505 | None:intergenic | 35.0% |
| ! | TTTGTTATAAGGAGGATTGG+TGG | - | chr1.1:66241131-66241150 | MS.gene032247:intron | 35.0% |
| !! | AAACTTTGACTTGTTGTAGG+AGG | + | chr1.1:66240104-66240123 | None:intergenic | 35.0% |
| !! | AACTTTGACTTGTTGTAGGA+GGG | + | chr1.1:66240103-66240122 | None:intergenic | 35.0% |
| !! | GGGAGCAGAATTTTGTTATA+AGG | - | chr1.1:66241120-66241139 | MS.gene032247:intron | 35.0% |
| !! | TTCAGAGCAATAGGTTGATT+TGG | + | chr1.1:66242641-66242660 | None:intergenic | 35.0% |
| !! | TTTTCAAGGTGAGTGTATCT+TGG | - | chr1.1:66242504-66242523 | MS.gene032247:intron | 35.0% |
| AAAATACACGTGAATGCGCA+TGG | + | chr1.1:66243956-66243975 | None:intergenic | 40.0% | |
| AAATACACGTGAATGCGCAT+GGG | + | chr1.1:66243955-66243974 | None:intergenic | 40.0% | |
| AACCCCTAAAAGAAAACACG+TGG | - | chr1.1:66240246-66240265 | MS.gene032247:CDS | 40.0% | |
| AACTAAAACTCTGGTATGGG+GGG | + | chr1.1:66241615-66241634 | None:intergenic | 40.0% | |
| AAGAGTAAGCCTGATTGCTA+TGG | - | chr1.1:66240937-66240956 | MS.gene032247:intron | 40.0% | |
| ACTCACAGCCTTCAAATCAT+AGG | + | chr1.1:66240977-66240996 | None:intergenic | 40.0% | |
| AGTAGAAAACCAATCACCCT+CGG | + | chr1.1:66243806-66243825 | None:intergenic | 40.0% | |
| AGTGTTCATGTCGGTGTATT+AGG | + | chr1.1:66241201-66241220 | None:intergenic | 40.0% | |
| ATAACAACTTCCCTCAGCAA+AGG | + | chr1.1:66242851-66242870 | None:intergenic | 40.0% | |
| ATAGCAATCAGGCTTACTCT+TGG | + | chr1.1:66240938-66240957 | None:intergenic | 40.0% | |
| ATGACTGAAATCGTCTGATG+CGG | - | chr1.1:66241775-66241794 | MS.gene032247:intron | 40.0% | |
| ATTGGCCGAGAAAAAATGTG+TGG | - | chr1.1:66244510-66244529 | MS.gene032247:intron | 40.0% | |
| CAGCCTTCAAATCATAGGTA+AGG | + | chr1.1:66240972-66240991 | None:intergenic | 40.0% | |
| CCCCTCTCAATCATCATTTA+TGG | + | chr1.1:66241642-66241661 | None:intergenic | 40.0% | |
| CGGCTTTGCTAGACATAAAT+GGG | - | chr1.1:66242957-66242976 | MS.gene032247:intron | 40.0% | |
| CGGTGAATCTTTGTATCTAG+AGG | + | chr1.1:66242291-66242310 | None:intergenic | 40.0% | |
| CTCAGTGGAACTAAATTGCA+TGG | + | chr1.1:66242577-66242596 | None:intergenic | 40.0% | |
| CTGCCTTACCTATGATTTGA+AGG | - | chr1.1:66240966-66240985 | MS.gene032247:CDS | 40.0% | |
| CTTGCAATACAAAGTCAGCT+TGG | - | chr1.1:66243145-66243164 | MS.gene032247:intron | 40.0% | |
| GTGTTCATGTCGGTGTATTA+GGG | + | chr1.1:66241200-66241219 | None:intergenic | 40.0% | |
| TAATACACCGACATGAACAC+TGG | - | chr1.1:66241200-66241219 | MS.gene032247:CDS | 40.0% | |
| TACACGCATACTCCAAAAAC+GGG | + | chr1.1:66242735-66242754 | None:intergenic | 40.0% | |
| TAGCAATCAGGCTTACTCTT+GGG | + | chr1.1:66240937-66240956 | None:intergenic | 40.0% | |
| TATTCAGTGTGCCTGAACAT+TGG | - | chr1.1:66244426-66244445 | MS.gene032247:intron | 40.0% | |
| TCAGACTCAGTCACCTTTAA+TGG | - | chr1.1:66242551-66242570 | MS.gene032247:intron | 40.0% | |
| TCCTCTTCCTGTAAACACAT+TGG | + | chr1.1:66242413-66242432 | None:intergenic | 40.0% | |
| TCCTTGATCACTTCTTTGAC+GGG | + | chr1.1:66243542-66243561 | None:intergenic | 40.0% | |
| TTGGAGTATGCGTGTATCAT+AGG | - | chr1.1:66242739-66242758 | MS.gene032247:intron | 40.0% | |
| ! | CAAGCTGACTTTGTATTGCA+AGG | + | chr1.1:66243147-66243166 | None:intergenic | 40.0% |
| ! | CTTGCATCTGGTGAAGTTTT+TGG | - | chr1.1:66242614-66242633 | MS.gene032247:intron | 40.0% |
| ! | GAAGAAAAAAGGAGGGTATG+TGG | + | chr1.1:66240464-66240483 | None:intergenic | 40.0% |
| ! | TTTTTGCGGAGCAGGTAAAT+TGG | - | chr1.1:66242984-66243003 | MS.gene032247:intron | 40.0% |
| !! | ACTTTGACTTGTTGTAGGAG+GGG | + | chr1.1:66240102-66240121 | None:intergenic | 40.0% |
| !! | ATTGCTGTTTGTGATCTACC+TGG | - | chr1.1:66244658-66244677 | MS.gene032247:intron | 40.0% |
| !! | GAAGCCTTTTGGCTATCAAT+TGG | + | chr1.1:66242063-66242082 | None:intergenic | 40.0% |
| !! | GGCTTTAGTGCATGATTTTG+TGG | - | chr1.1:66241071-66241090 | MS.gene032247:intron | 40.0% |
| !!! | GTGAGCCACACATTTTTTCT+CGG | + | chr1.1:66244518-66244537 | None:intergenic | 40.0% |
| AAATGTGTGGCTCACCTAAC+CGG | - | chr1.1:66244523-66244542 | MS.gene032247:intron | 45.0% | |
| AACCGGCGAGGTAAATATTG+CGG | - | chr1.1:66244540-66244559 | MS.gene032247:intron | 45.0% | |
| AATATTGCAGCCGCAATAGC+GGG | - | chr1.1:66241872-66241891 | MS.gene032247:CDS | 45.0% | |
| ACACTTGCCTTTGATCGACA+CGG | + | chr1.1:66244170-66244189 | None:intergenic | 45.0% | |
| ACTAAAACTCTGGTATGGGG+GGG | + | chr1.1:66241614-66241633 | None:intergenic | 45.0% | |
| AGGAAGAGGAGACAAAATCC+TGG | - | chr1.1:66242423-66242442 | MS.gene032247:intron | 45.0% | |
| AGGGATAGAGGTCGGTAATA+TGG | - | chr1.1:66241470-66241489 | MS.gene032247:CDS | 45.0% | |
| AGGTCATTGCAAGCTCTTGA+AGG | - | chr1.1:66242677-66242696 | MS.gene032247:intron | 45.0% | |
| AGGTGTTCCAAGATGCAGAA+TGG | - | chr1.1:66242888-66242907 | MS.gene032247:intron | 45.0% | |
| AGTAGCAGTTGTCACGATTG+CGG | - | chr1.1:66241503-66241522 | MS.gene032247:CDS | 45.0% | |
| CAATATTGCAGCCGCAATAG+CGG | - | chr1.1:66241871-66241890 | MS.gene032247:CDS | 45.0% | |
| CACAACTCTCATTTCTCTCG+AGG | - | chr1.1:66240709-66240728 | MS.gene032247:intron | 45.0% | |
| CAGAAGACACCATAGCAATC+AGG | + | chr1.1:66240949-66240968 | None:intergenic | 45.0% | |
| CCTACGACAGAAATTAGCCA+AGG | - | chr1.1:66244309-66244328 | MS.gene032247:intron | 45.0% | |
| CCTTGGCTAATTTCTGTCGT+AGG | + | chr1.1:66244312-66244331 | None:intergenic | 45.0% | |
| CGTTTGGCCAATGTGTTTAC+AGG | - | chr1.1:66242403-66242422 | MS.gene032247:intron | 45.0% | |
| CTCAAGTTTCAGACTCACCT+TGG | + | chr1.1:66244329-66244348 | None:intergenic | 45.0% | |
| GATTTCCAGTGGTATACACC+TGG | + | chr1.1:66244112-66244131 | None:intergenic | 45.0% | |
| GCAGACAGAAGCTGAGTTAT+TGG | - | chr1.1:66244492-66244511 | MS.gene032247:intron | 45.0% | |
| GCATCTTGGAACACCTCATA+AGG | + | chr1.1:66242884-66242903 | None:intergenic | 45.0% | |
| GCATGTTGAGTTCTGTGAAG+TGG | + | chr1.1:66240768-66240787 | None:intergenic | 45.0% | |
| GCCAATGTGTTTACAGGAAG+AGG | - | chr1.1:66242409-66242428 | MS.gene032247:intron | 45.0% | |
| GCGGCTTTGCTAGACATAAA+TGG | - | chr1.1:66242956-66242975 | MS.gene032247:intron | 45.0% | |
| GCTAAGACAGCAACCCATAA+AGG | + | chr1.1:66242213-66242232 | None:intergenic | 45.0% | |
| GGTGTTCCAAGATGCAGAAT+GGG | - | chr1.1:66242889-66242908 | MS.gene032247:intron | 45.0% | |
| GGTTGCTGTCTTAGCAGTTT+AGG | - | chr1.1:66242218-66242237 | MS.gene032247:intron | 45.0% | |
| GTAGAAAACCAATCACCCTC+GGG | + | chr1.1:66243805-66243824 | None:intergenic | 45.0% | |
| GTATGTGGGAACAAAGAGGA+TGG | + | chr1.1:66240449-66240468 | None:intergenic | 45.0% | |
| TGAGAACAGGGCAAAATGTC+AGG | - | chr1.1:66243311-66243330 | MS.gene032247:intron | 45.0% | |
| TTACATTTCTCCTGGGAGCA+TGG | + | chr1.1:66244689-66244708 | None:intergenic | 45.0% | |
| TTGATCATTCCTACTCCCGA+GGG | - | chr1.1:66243787-66243806 | MS.gene032247:intron | 45.0% | |
| TTTGATCATTCCTACTCCCG+AGG | - | chr1.1:66243786-66243805 | MS.gene032247:intron | 45.0% | |
| ! | AAAGTACAGTGATGGTGCCT+AGG | + | chr1.1:66240741-66240760 | None:intergenic | 45.0% |
| ! | CAATATTTACCTCGCCGGTT+AGG | + | chr1.1:66244540-66244559 | None:intergenic | 45.0% |
| ! | GCAGAATGGGCTTTGCTAAT+AGG | - | chr1.1:66242902-66242921 | MS.gene032247:intron | 45.0% |
| ! | GCTTTTCCCTGTTGTACACA+TGG | + | chr1.1:66243075-66243094 | None:intergenic | 45.0% |
| ! | GTGGTGCTAAAGTACAGTGA+TGG | + | chr1.1:66240749-66240768 | None:intergenic | 45.0% |
| !! | ACAGGGAAAAGCACTCAATG+CGG | - | chr1.1:66243083-66243102 | MS.gene032247:intron | 45.0% |
| !!! | GAGGGTGATTGGTTTTCTAC+TGG | - | chr1.1:66243805-66243824 | MS.gene032247:CDS | 45.0% |
| AAATATTGCGGCCCGAATCG+CGG | - | chr1.1:66244552-66244571 | MS.gene032247:intron | 50.0% | |
| ATTAAGGTGTGACGCCGTTG+AGG | - | chr1.1:66241833-66241852 | MS.gene032247:CDS | 50.0% | |
| CAATGCCAGGTGTATACCAC+TGG | - | chr1.1:66244104-66244123 | MS.gene032247:intron | 50.0% | |
| CAATGTGTAGCTAGCCCTGA+AGG | - | chr1.1:66243418-66243437 | MS.gene032247:intron | 50.0% | |
| CTAATAGGTGCAAAGCCTCG+AGG | - | chr1.1:66242917-66242936 | MS.gene032247:intron | 50.0% | |
| GCAAAGCCCATTCTGCATCT+TGG | + | chr1.1:66242898-66242917 | None:intergenic | 50.0% | |
| GCCCGTCAAAGAAGTGATCA+AGG | - | chr1.1:66243538-66243557 | MS.gene032247:intron | 50.0% | |
| GGGAAACCACTCAACTACTC+AGG | - | chr1.1:66243481-66243500 | MS.gene032247:intron | 50.0% | |
| GTAGAAGACACCTGCCTTCA+GGG | + | chr1.1:66243435-66243454 | None:intergenic | 50.0% | |
| GTCGTGTCCAGTGTTCATGT+CGG | + | chr1.1:66241210-66241229 | None:intergenic | 50.0% | |
| TGTCACGATTGCGGTCATTG+TGG | - | chr1.1:66241512-66241531 | MS.gene032247:CDS | 50.0% | |
| TGTTGTGGTAGCCTCCTCAA+CGG | + | chr1.1:66241850-66241869 | None:intergenic | 50.0% | |
| TGTTTGCGTAGACCGCGATT+CGG | + | chr1.1:66244567-66244586 | None:intergenic | 50.0% | |
| TTCTCTCGAGGACTCTTCCT+AGG | - | chr1.1:66240721-66240740 | MS.gene032247:intron | 50.0% | |
| ! | CAACAATGCAGGTGTTGCGA+TGG | - | chr1.1:66242805-66242824 | MS.gene032247:intron | 50.0% |
| ! | CAGTATGCCGTGTCGATCAA+AGG | - | chr1.1:66244160-66244179 | MS.gene032247:intron | 50.0% |
| ! | CGGCTGCAATATTGCTGTTG+TGG | + | chr1.1:66241865-66241884 | None:intergenic | 50.0% |
| ! | GACTGAGTCTGAGACTGCAA+TGG | + | chr1.1:66242543-66242562 | None:intergenic | 50.0% |
| ! | GAGGGTATGTGGGAACAAAG+AGG | + | chr1.1:66240453-66240472 | None:intergenic | 50.0% |
| ! | TATAGGTGTCGTGTCGGTGT+CGG | - | chr1.1:66241284-66241303 | MS.gene032247:CDS | 50.0% |
| ! | TATTATCCGTGTCGGCGTGT+CGG | + | chr1.1:66241234-66241253 | None:intergenic | 50.0% |
| !! | CTTCAGGGCTAGCTACACAT+TGG | + | chr1.1:66243420-66243439 | None:intergenic | 50.0% |
| AAAGCCTCGAGGACCTGGAA+TGG | - | chr1.1:66242928-66242947 | MS.gene032247:intron | 55.0% | |
| AACCAATCACCCTCGGGAGT+AGG | + | chr1.1:66243799-66243818 | None:intergenic | 55.0% | |
| AACTCTGGTATGGGGGGGTA+CGG | + | chr1.1:66241609-66241628 | None:intergenic | 55.0% | |
| CAGGGACCTGAGTAGTTGAG+TGG | + | chr1.1:66243490-66243509 | None:intergenic | 55.0% | |
| CGTAGAAGACACCTGCCTTC+AGG | + | chr1.1:66243436-66243455 | None:intergenic | 55.0% | |
| GGATCCTGTGTCTGTACAGC+TGG | + | chr1.1:66240916-66240935 | None:intergenic | 55.0% | |
| GGCCGCAATATTTACCTCGC+CGG | + | chr1.1:66244545-66244564 | None:intergenic | 55.0% | |
| GTTTGCGTAGACCGCGATTC+GGG | + | chr1.1:66244566-66244585 | None:intergenic | 55.0% | |
| TTCCTACTCCCGAGGGTGAT+TGG | - | chr1.1:66243794-66243813 | MS.gene032247:intron | 55.0% | |
| ! | AGGTGTTGCGATGGAGTTGG+AGG | - | chr1.1:66242814-66242833 | MS.gene032247:intron | 55.0% |
| ! | TGCAGGTGTTGCGATGGAGT+TGG | - | chr1.1:66242811-66242830 | MS.gene032247:intron | 55.0% |
| ! | TGGGCAGATTTTTGCGGAGC+AGG | - | chr1.1:66242976-66242995 | MS.gene032247:intron | 55.0% |
| AAAGCCGCACGCTCCATTCC+AGG | + | chr1.1:66242944-66242963 | None:intergenic | 60.0% | |
| AAGGTGTGACGCCGTTGAGG+AGG | - | chr1.1:66241836-66241855 | MS.gene032247:CDS | 60.0% | |
| AGCAGCACCCGAGACTGCAA+TGG | + | chr1.1:66242462-66242481 | None:intergenic | 60.0% | |
| AGGACCTGGAATGGAGCGTG+CGG | - | chr1.1:66242937-66242956 | MS.gene032247:intron | 60.0% | |
| ATGCGCATGGGTCCCGACAT+TGG | + | chr1.1:66243943-66243962 | None:intergenic | 60.0% | |
| CCTGGTGATACCATGCTCCC+AGG | - | chr1.1:66244676-66244695 | MS.gene032247:intron | 60.0% | |
| GGTGCCAGCTGTACAGACAC+AGG | - | chr1.1:66240909-66240928 | MS.gene032247:intron | 60.0% | |
| GTGTAGCTAGCCCTGAAGGC+AGG | - | chr1.1:66243422-66243441 | MS.gene032247:intron | 60.0% | |
| ! | ATTGCAGTCTCGGGTGCTGC+TGG | - | chr1.1:66242461-66242480 | MS.gene032247:intron | 60.0% |
| ! | CCTGGGAGCATGGTATCACC+AGG | + | chr1.1:66244679-66244698 | None:intergenic | 60.0% |
| !! | GACGGGCAACCCATCGATTC+TGG | + | chr1.1:66243525-66243544 | None:intergenic | 60.0% |
| !! | GAGGAGCGTCCGTGCTTCAT+AGG | - | chr1.1:66241323-66241342 | MS.gene032247:CDS | 60.0% |
| ACGACACCGACACGCCGACA+CGG | - | chr1.1:66241225-66241244 | MS.gene032247:CDS | 65.0% | |
| CGCTCCATTCCAGGTCCTCG+AGG | + | chr1.1:66242935-66242954 | None:intergenic | 65.0% | |
| CGGACACGCGTCCTAGTCTG+AGG | - | chr1.1:66241304-66241323 | MS.gene032247:CDS | 65.0% | |
| GCACGGACGCTCCTCAGACT+AGG | + | chr1.1:66241318-66241337 | None:intergenic | 65.0% | |
| GCAGTCCGCACCCGCTATTG+CGG | + | chr1.1:66241885-66241904 | None:intergenic | 65.0% | |
| GGTGCAAAGCCTCGAGGACC+TGG | - | chr1.1:66242923-66242942 | MS.gene032247:intron | 65.0% | |
| TGTGGCTCACCTAACCGGCG+AGG | - | chr1.1:66244528-66244547 | MS.gene032247:intron | 65.0% | |
| ! | TCTGGTATGGGGGGGTACGG+TGG | + | chr1.1:66241606-66241625 | None:intergenic | 65.0% |
| !! | TGCAGCCGCAATAGCGGGTG+CGG | - | chr1.1:66241877-66241896 | MS.gene032247:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66240082 | 66244708 | 66240082 | ID=MS.gene032247 |
| chr1.1 | mRNA | 66240082 | 66244708 | 66240082 | ID=MS.gene032247.t1;Parent=MS.gene032247 |
| chr1.1 | exon | 66244677 | 66244708 | 66244677 | ID=MS.gene032247.t1.exon1;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66244677 | 66244708 | 66244677 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66243800 | 66243890 | 66243800 | ID=MS.gene032247.t1.exon2;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66243800 | 66243890 | 66243800 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66242279 | 66242365 | 66242279 | ID=MS.gene032247.t1.exon3;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66242279 | 66242365 | 66242279 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66242092 | 66242176 | 66242092 | ID=MS.gene032247.t1.exon4;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66242092 | 66242176 | 66242092 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66241793 | 66241974 | 66241793 | ID=MS.gene032247.t1.exon5;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66241793 | 66241974 | 66241793 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66241633 | 66241703 | 66241633 | ID=MS.gene032247.t1.exon6;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66241633 | 66241703 | 66241633 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66241458 | 66241548 | 66241458 | ID=MS.gene032247.t1.exon7;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66241458 | 66241548 | 66241458 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66241186 | 66241362 | 66241186 | ID=MS.gene032247.t1.exon8;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66241186 | 66241362 | 66241186 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66240962 | 66241084 | 66240962 | ID=MS.gene032247.t1.exon9;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66240962 | 66241084 | 66240962 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66240609 | 66240677 | 66240609 | ID=MS.gene032247.t1.exon10;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66240609 | 66240677 | 66240609 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66240460 | 66240528 | 66240460 | ID=MS.gene032247.t1.exon11;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66240460 | 66240528 | 66240460 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66240241 | 66240294 | 66240241 | ID=MS.gene032247.t1.exon12;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66240241 | 66240294 | 66240241 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| chr1.1 | exon | 66240082 | 66240135 | 66240082 | ID=MS.gene032247.t1.exon13;Parent=MS.gene032247.t1 |
| chr1.1 | CDS | 66240082 | 66240135 | 66240082 | ID=cds.MS.gene032247.t1;Parent=MS.gene032247.t1 |
| Gene Sequence |
| Protein sequence |
