Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005767.t1 | O48902.1 | 100 | 437 | 0 | 0 | 1 | 437 | 1 | 437 | 1.20E-251 | 878.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005767.t1 | O48902 | 100.0 | 437 | 0 | 0 | 1 | 437 | 1 | 437 | 2.8e-254 | 878.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005767.t1 | A0A072VPJ2 | 97.5 | 437 | 11 | 0 | 1 | 437 | 1 | 437 | 3.1e-246 | 860.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005767 | MS.gene004851 | PPI |
| MS.gene005767 | MS.gene65490 | PPI |
| MS.gene005767 | MS.gene053394 | PPI |
| MS.gene005767 | MS.gene52949 | PPI |
| MS.gene85559 | MS.gene005767 | PPI |
| MS.gene005767 | MS.gene65938 | PPI |
| MS.gene005767 | MS.gene07386 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005767.t1 | MTR_1g090730 | 97.483 | 437 | 11 | 0 | 1 | 437 | 1 | 437 | 0.0 | 889 |
| MS.gene005767.t1 | MTR_1g090730 | 97.199 | 357 | 10 | 0 | 1 | 357 | 1 | 357 | 0.0 | 724 |
| MS.gene005767.t1 | MTR_8g005980 | 42.901 | 324 | 179 | 4 | 92 | 411 | 85 | 406 | 7.43e-76 | 243 |
| MS.gene005767.t1 | MTR_1g076130 | 40.426 | 329 | 189 | 4 | 92 | 416 | 3 | 328 | 9.18e-73 | 232 |
| MS.gene005767.t1 | MTR_1g043040 | 39.818 | 329 | 191 | 4 | 92 | 416 | 3 | 328 | 3.87e-71 | 228 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005767.t1 | AT5G58330 | 84.314 | 408 | 62 | 2 | 32 | 437 | 35 | 442 | 0.0 | 707 |
| MS.gene005767.t1 | AT5G58330 | 84.597 | 409 | 60 | 3 | 32 | 437 | 35 | 443 | 0.0 | 706 |
| MS.gene005767.t1 | AT5G58330 | 89.222 | 334 | 35 | 1 | 105 | 437 | 1 | 334 | 0.0 | 617 |
| MS.gene005767.t1 | AT5G56720 | 41.049 | 324 | 185 | 3 | 92 | 411 | 42 | 363 | 3.21e-71 | 229 |
| MS.gene005767.t1 | AT1G04410 | 41.104 | 326 | 182 | 4 | 92 | 411 | 3 | 324 | 4.82e-71 | 228 |
| MS.gene005767.t1 | AT5G43330 | 41.104 | 326 | 182 | 4 | 92 | 411 | 3 | 324 | 3.04e-70 | 226 |
Find 104 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTGCTCTGAAATTATT+AGG | 0.203572 | 1.3:-63559361 | MS.gene005767:CDS |
| GCGGCTTTGCTAGACATAAA+TGG | 0.224890 | 1.3:-63559052 | MS.gene005767:CDS |
| AAGTGTCAAATATGACAATA+TGG | 0.242700 | 1.3:-63558549 | MS.gene005767:CDS |
| GACGGGCAACCCATCGATTC+TGG | 0.258257 | 1.3:+63558486 | None:intergenic |
| GCAGACAGAAGCTGAGTTAT+TGG | 0.262024 | 1.3:-63557516 | MS.gene005767:intron |
| TTCAGAGCAATAGGTTGATT+TGG | 0.265247 | 1.3:+63559370 | None:intergenic |
| CTGCCTTACCTATGATTTGA+AGG | 0.303691 | 1.3:-63561041 | MS.gene005767:CDS |
| CCTAATAATTTCAGAGCAAT+AGG | 0.307670 | 1.3:+63559361 | None:intergenic |
| GCAGAATGGGCTTTGCTAAT+AGG | 0.308960 | 1.3:-63559106 | MS.gene005767:CDS |
| CGTAGAAGACACCTGCCTTC+AGG | 0.314755 | 1.3:+63558575 | None:intergenic |
| TATACCACTGGAAATCCTTA+TGG | 0.344085 | 1.3:-63557892 | MS.gene005767:CDS |
| AATGGTAATTAATTTCTTCC+AGG | 0.347857 | 1.3:+63559567 | None:intergenic |
| AAGTGATCAAGGATCATAAA+TGG | 0.368193 | 1.3:-63558459 | MS.gene005767:CDS |
| CAATATTTACCTCGCCGGTT+AGG | 0.371646 | 1.3:+63557471 | None:intergenic |
| GCAAAGCCCATTCTGCATCT+TGG | 0.385116 | 1.3:+63559113 | None:intergenic |
| AAAGCCGCACGCTCCATTCC+AGG | 0.399549 | 1.3:+63559067 | None:intergenic |
| ATTAATTACCATTGCAGTCT+CGG | 0.405725 | 1.3:-63559557 | MS.gene005767:CDS |
| GTAGAAGACACCTGCCTTCA+GGG | 0.407624 | 1.3:+63558576 | None:intergenic |
| CACCTTGAAAAGTAGATGAT+TGG | 0.408340 | 1.3:+63559516 | None:intergenic |
| ATTCTGGCATTTAAGAAGTC+AGG | 0.412554 | 1.3:+63558502 | None:intergenic |
| CGGCTTTGCTAGACATAAAT+GGG | 0.422655 | 1.3:-63559051 | MS.gene005767:CDS |
| AAATGTGTGGCTCACCTAAC+CGG | 0.423595 | 1.3:-63557485 | MS.gene005767:CDS |
| TTCCTACTCCCGAGGGTGAT+TGG | 0.424558 | 1.3:-63558214 | MS.gene005767:CDS |
| TAACTCGTTTAGATGAGAAC+AGG | 0.428132 | 1.3:-63558710 | MS.gene005767:CDS |
| TTCTTAAATGCCAGAATCGA+TGG | 0.429266 | 1.3:-63558496 | MS.gene005767:CDS |
| ATCCTTGATCACTTCTTTGA+CGG | 0.429838 | 1.3:+63558468 | None:intergenic |
| AGTGTCAAATATGACAATAT+GGG | 0.441799 | 1.3:-63558548 | MS.gene005767:CDS |
| CAAGGATCATAAATGGTTAG+AGG | 0.443116 | 1.3:-63558452 | MS.gene005767:CDS |
| TGAGAACAGGGCAAAATGTC+AGG | 0.444147 | 1.3:-63558697 | MS.gene005767:intron |
| TATTAGCATTGATCCTTATG+AGG | 0.445684 | 1.3:-63559140 | MS.gene005767:CDS |
| GCATCTTGGAACACCTCATA+AGG | 0.449712 | 1.3:+63559127 | None:intergenic |
| ACTCACAGCCTTCAAATCAT+AGG | 0.450924 | 1.3:+63561033 | None:intergenic |
| GGATCCTGTGTCTGTACTGC+TGG | 0.455969 | 1.3:+63561094 | None:intergenic |
| TCCTTGATCACTTCTTTGAC+GGG | 0.461687 | 1.3:+63558469 | None:intergenic |
| ATATCTTCAGCTATTCCATA+AGG | 0.466564 | 1.3:+63557877 | None:intergenic |
| ATTGCAGTCTCGGGTGCTGC+AGG | 0.467451 | 1.3:-63559547 | MS.gene005767:CDS |
| TTAGCTAGTTACATTTCTCC+TGG | 0.468553 | 1.3:+63557314 | None:intergenic |
| TTAATTACCATTGCAGTCTC+GGG | 0.472464 | 1.3:-63559556 | MS.gene005767:CDS |
| TGCTCTGAAATTATTAGGAT+CGG | 0.475625 | 1.3:-63559356 | MS.gene005767:CDS |
| CAGAAGACACCATAGCAATC+AGG | 0.479428 | 1.3:+63561061 | None:intergenic |
| ATAGCAATCAGGCTTACTCT+TGG | 0.486336 | 1.3:+63561072 | None:intergenic |
| GGTGCAAAGCCTCGAGGACC+TGG | 0.489357 | 1.3:-63559085 | MS.gene005767:CDS |
| CAAGCTGACTTTGTATTGCA+AGG | 0.493060 | 1.3:+63558864 | None:intergenic |
| TAGCAATCAGGCTTACTCTT+GGG | 0.494853 | 1.3:+63561073 | None:intergenic |
| CACAACTCTCATTTCTCTCT+AGG | 0.499049 | 1.3:-63561299 | MS.gene005767:CDS |
| GGTGTTCCAAGATGCAGAAT+GGG | 0.508422 | 1.3:-63559119 | MS.gene005767:CDS |
| CTCTTTATTTCCTTTGCTGA+GGG | 0.509334 | 1.3:-63559170 | MS.gene005767:CDS |
| AGGTGTTCCAAGATGCAGAA+TGG | 0.523630 | 1.3:-63559120 | MS.gene005767:CDS |
| CAGTATGCCGTGTCGATCAA+AGG | 0.525529 | 1.3:-63557848 | MS.gene005767:intron |
| CAATGCCAGGTGTATACCAC+TGG | 0.532941 | 1.3:-63557904 | MS.gene005767:intron |
| CCTTGGCTAATTTCTGTCGT+AGG | 0.542771 | 1.3:+63557699 | None:intergenic |
| ACTCTTTATTTCCTTTGCTG+AGG | 0.543885 | 1.3:-63559171 | MS.gene005767:CDS |
| AGGTCATTGCAAGCTCTTGA+AGG | 0.545237 | 1.3:-63559331 | MS.gene005767:intron |
| AGGAAGAGGAGACAAAATCC+TGG | 0.546374 | 1.3:-63559585 | MS.gene005767:CDS |
| AAAGTACAGTGATGGTGCCT+AGG | 0.547922 | 1.3:+63561270 | None:intergenic |
| AAGCTGACTTTGTATTGCAA+GGG | 0.548231 | 1.3:+63558865 | None:intergenic |
| TTGTTTGATTGTTAGAGAGG+TGG | 0.548629 | 1.3:-63558317 | MS.gene005767:intron |
| GGCCGCAATATTTACCTCGC+CGG | 0.551341 | 1.3:+63557466 | None:intergenic |
| TTACATTTCTCCTGGGAGCA+TGG | 0.551522 | 1.3:+63557322 | None:intergenic |
| GCCCGTCAAAGAAGTGATCA+AGG | 0.552804 | 1.3:-63558470 | MS.gene005767:CDS |
| CCTGGGAGCATGGTATCACC+AGG | 0.553980 | 1.3:+63557332 | None:intergenic |
| TTCTCTCTAGGACTCTTCCT+AGG | 0.556403 | 1.3:-63561287 | MS.gene005767:CDS |
| CAGCCTTCAAATCATAGGTA+AGG | 0.557569 | 1.3:+63561038 | None:intergenic |
| CATCTAAACGAGTTAAAGCA+TGG | 0.559378 | 1.3:+63558718 | None:intergenic |
| AGGAATGATCAAAGATCGTA+TGG | 0.561984 | 1.3:+63558232 | None:intergenic |
| CAATGTGTAGCTAGCCCTGA+AGG | 0.566385 | 1.3:-63558590 | MS.gene005767:intron |
| AAGAGTAAGCCTGATTGCTA+TGG | 0.566462 | 1.3:-63561070 | MS.gene005767:CDS |
| CGCTCCATTCCAGGTCCTCG+AGG | 0.567002 | 1.3:+63559076 | None:intergenic |
| TAGCTAGTTACATTTCTCCT+GGG | 0.567890 | 1.3:+63557315 | None:intergenic |
| ATTGCTGTTTGTGATCTACC+TGG | 0.568507 | 1.3:-63557350 | MS.gene005767:CDS |
| GTGTAGCTAGCCCTGAAGGC+AGG | 0.575889 | 1.3:-63558586 | MS.gene005767:intron |
| CCTGGTGATACCATGCTCCC+AGG | 0.576358 | 1.3:-63557332 | MS.gene005767:CDS |
| GCATGTTGAGTTCTGTGAAG+TGG | 0.576492 | 1.3:+63561243 | None:intergenic |
| TCTTAAATGCCAGAATCGAT+GGG | 0.577340 | 1.3:-63558495 | MS.gene005767:CDS |
| TTTGATCATTCCTACTCCCG+AGG | 0.577680 | 1.3:-63558222 | MS.gene005767:CDS |
| CAACAATGCAGGTGTTGCGA+TGG | 0.584262 | 1.3:-63559203 | MS.gene005767:intron |
| GACAGAAGCTGAGTTATTGG+CGG | 0.587741 | 1.3:-63557513 | MS.gene005767:CDS |
| AACCAATCACCCTCGGGAGT+AGG | 0.588155 | 1.3:+63558212 | None:intergenic |
| AAAGCCTCGAGGACCTGGAA+TGG | 0.591306 | 1.3:-63559080 | MS.gene005767:CDS |
| TGCAGGTGTTGCGATGGAGT+TGG | 0.591881 | 1.3:-63559197 | MS.gene005767:intron |
| TGAAATTATTAGGATCGGAA+AGG | 0.596316 | 1.3:-63559351 | MS.gene005767:CDS |
| TTCTGGCATTTAAGAAGTCA+GGG | 0.596329 | 1.3:+63558503 | None:intergenic |
| AATGTCAAAGTTATAGTCGT+GGG | 0.603734 | 1.3:-63558891 | MS.gene005767:CDS |
| ATAACAACTTCCCTCAGCAA+AGG | 0.605246 | 1.3:+63559160 | None:intergenic |
| AGTAGAAAACCAATCACCCT+CGG | 0.605810 | 1.3:+63558205 | None:intergenic |
| AGGTGTTGCGATGGAGTTGG+AGG | 0.609283 | 1.3:-63559194 | MS.gene005767:CDS |
| GTGTCAAATATGACAATATG+GGG | 0.610500 | 1.3:-63558547 | MS.gene005767:CDS |
| GGGAAACCACTCAACTACTC+AGG | 0.614384 | 1.3:-63558527 | MS.gene005767:CDS |
| GTAGAAAACCAATCACCCTC+GGG | 0.619646 | 1.3:+63558206 | None:intergenic |
| AACTCGTTTAGATGAGAACA+GGG | 0.621950 | 1.3:-63558709 | MS.gene005767:CDS |
| TTGATCATTCCTACTCCCGA+GGG | 0.629643 | 1.3:-63558221 | MS.gene005767:CDS |
| CAGGGACCTGAGTAGTTGAG+TGG | 0.629977 | 1.3:+63558521 | None:intergenic |
| CAATGTCAAAGTTATAGTCG+TGG | 0.630469 | 1.3:-63558892 | MS.gene005767:CDS |
| TGCAGCACCCGAGACTGCAA+TGG | 0.635510 | 1.3:+63559549 | None:intergenic |
| GGCGCCAGCAGTACAGACAC+AGG | 0.643318 | 1.3:-63561098 | MS.gene005767:CDS |
| TGGTGATTATGAACTTGTCA+AGG | 0.654428 | 1.3:-63557741 | MS.gene005767:CDS |
| ACACTTGCCTTTGATCGACA+CGG | 0.659090 | 1.3:+63557841 | None:intergenic |
| CTAATAGGTGCAAAGCCTCG+AGG | 0.681429 | 1.3:-63559091 | MS.gene005767:CDS |
| AGGACCTGGAATGGAGCGTG+CGG | 0.691301 | 1.3:-63559071 | MS.gene005767:CDS |
| TATTCCATAAGGATTTCCAG+TGG | 0.701953 | 1.3:+63557888 | None:intergenic |
| GTGGTGCTAAAGTACAGTGA+TGG | 0.702787 | 1.3:+63561262 | None:intergenic |
| CCTACGACAGAAATTAGCCA+AGG | 0.707374 | 1.3:-63557699 | MS.gene005767:intron |
| TGTGGCTCACCTAACCGGCG+AGG | 0.716043 | 1.3:-63557480 | MS.gene005767:intron |
| ACAGGGAAAAGCACTCAATG+CGG | 0.748480 | 1.3:-63558925 | MS.gene005767:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAAAAGTTTTATTCATTA+GGG | - | chr1.3:63560909-63560928 | MS.gene005767:intron | 15.0% |
| !! | AACATAAAAAATTAACTCAG+TGG | + | chr1.3:63559260-63559279 | None:intergenic | 20.0% |
| !! | AATCCATGTAATTAAATATG+TGG | - | chr1.3:63560290-63560309 | MS.gene005767:intron | 20.0% |
| !! | ACATTATTCAGTGTAATTAT+AGG | - | chr1.3:63557934-63557953 | MS.gene005767:intron | 20.0% |
| !! | ACTAAATCATTTGTTTCATT+TGG | - | chr1.3:63558986-63559005 | MS.gene005767:intron | 20.0% |
| !! | ATATACTATATAGATAGAAG+TGG | - | chr1.3:63558599-63558618 | MS.gene005767:intron | 20.0% |
| !! | ATGTTCTTTAATTGGATATT+TGG | - | chr1.3:63557768-63557787 | MS.gene005767:intron | 20.0% |
| !! | ATTAATATATTCACCAATGT+CGG | - | chr1.3:63560595-63560614 | MS.gene005767:intron | 20.0% |
| !! | ATTCCACATATTTAATTACA+TGG | + | chr1.3:63560296-63560315 | None:intergenic | 20.0% |
| !! | CAAAAGGTAAAATTTGTAAT+TGG | - | chr1.3:63560267-63560286 | MS.gene005767:intron | 20.0% |
| !! | CATCTATATATACAATGATT+AGG | + | chr1.3:63557840-63557859 | None:intergenic | 20.0% |
| !! | CGATAACAATTTCATATATT+TGG | - | chr1.3:63561030-63561049 | MS.gene005767:intron | 20.0% |
| !! | GTATTTACTTGATATAGAAT+TGG | - | chr1.3:63560526-63560545 | MS.gene005767:intron | 20.0% |
| !! | TATTGTTAACTTATTACACA+AGG | + | chr1.3:63560334-63560353 | None:intergenic | 20.0% |
| !! | TCATTAATTCTTATTCTTAC+TGG | - | chr1.3:63558016-63558035 | MS.gene005767:intron | 20.0% |
| !! | TGGTTAATATGTTCTTTAAT+TGG | - | chr1.3:63557760-63557779 | MS.gene005767:intron | 20.0% |
| !! | TGTTCTTTAATTGGATATTT+GGG | - | chr1.3:63557769-63557788 | MS.gene005767:intron | 20.0% |
| !! | TTTCAAATATAGCTCTTATT+AGG | + | chr1.3:63558066-63558085 | None:intergenic | 20.0% |
| !!! | AAATTTTTTGCAGGAATATT+TGG | + | chr1.3:63559938-63559957 | None:intergenic | 20.0% |
| !!! | AACTGCAATTTTAAATTAAC+AGG | + | chr1.3:63558106-63558125 | None:intergenic | 20.0% |
| !!! | AACTTTAAAGCTCAATTAAA+AGG | - | chr1.3:63560674-63560693 | MS.gene005767:intron | 20.0% |
| !!! | AATAAAACTTTTTGTCATAG+AGG | + | chr1.3:63560904-63560923 | None:intergenic | 20.0% |
| !!! | CTCACCAAAAATTTAAATTT+TGG | + | chr1.3:63558408-63558427 | None:intergenic | 20.0% |
| !!! | GACAAAAAGTTTTATTCATT+AGG | - | chr1.3:63560908-63560927 | MS.gene005767:intron | 20.0% |
| !!! | GGTTCCAAAATTTAAATTTT+TGG | - | chr1.3:63558401-63558420 | MS.gene005767:intron | 20.0% |
| !!! | TATAGTTAACTGTCTTTTAT+AGG | + | chr1.3:63559701-63559720 | None:intergenic | 20.0% |
| !!! | TGTTAATTTAAAATTGCAGT+TGG | - | chr1.3:63558105-63558124 | MS.gene005767:intron | 20.0% |
| !!! | TTCTGTTATTTCTTCTTTTT+TGG | + | chr1.3:63560043-63560062 | None:intergenic | 20.0% |
| ! | AAAAGCTTCAAGAACATTAT+TGG | - | chr1.3:63558742-63558761 | MS.gene005767:CDS | 25.0% |
| ! | AAGCAATTCAGAAATCATAA+AGG | + | chr1.3:63560876-63560895 | None:intergenic | 25.0% |
| ! | AAGTGTCAAATATGACAATA+TGG | - | chr1.3:63560127-63560146 | MS.gene005767:intron | 25.0% |
| ! | AATACCATGGAAAATTTGAA+AGG | + | chr1.3:63559015-63559034 | None:intergenic | 25.0% |
| ! | AATGGTAATTAATTTCTTCC+AGG | + | chr1.3:63559112-63559131 | None:intergenic | 25.0% |
| ! | AGTGTCAAATATGACAATAT+GGG | - | chr1.3:63560128-63560147 | MS.gene005767:intron | 25.0% |
| ! | ATAAATACAGTAGAGTAACA+AGG | + | chr1.3:63557672-63557691 | None:intergenic | 25.0% |
| ! | ATTGTAACAAGTATCCTTTA+TGG | - | chr1.3:63558864-63558883 | MS.gene005767:intron | 25.0% |
| ! | CAAAGACAAAAACAGTTTAT+AGG | + | chr1.3:63560700-63560719 | None:intergenic | 25.0% |
| ! | CTATATCAAGTAAATACACA+AGG | + | chr1.3:63560523-63560542 | None:intergenic | 25.0% |
| ! | CTTAACATTAAGTAATACCA+TGG | + | chr1.3:63559028-63559047 | None:intergenic | 25.0% |
| ! | TTAATATATTCACCAATGTC+GGG | - | chr1.3:63560596-63560615 | MS.gene005767:intron | 25.0% |
| ! | TTATTGTTTGATTGTTAGAG+AGG | - | chr1.3:63560356-63560375 | MS.gene005767:intron | 25.0% |
| ! | TTGTAACAAGTATCCTTTAT+GGG | - | chr1.3:63558865-63558884 | MS.gene005767:intron | 25.0% |
| !! | ATAATGTTCTTGAAGCTTTT+TGG | + | chr1.3:63558742-63558761 | None:intergenic | 25.0% |
| !! | ATATACCAATTTGTTTCGTT+TGG | - | chr1.3:63559055-63559074 | MS.gene005767:CDS | 25.0% |
| !! | GATTTTCCTCAAATATTTGT+TGG | + | chr1.3:63558835-63558854 | None:intergenic | 25.0% |
| !!! | AAATATTTGTTGGAAGCATT+AGG | + | chr1.3:63558825-63558844 | None:intergenic | 25.0% |
| !!! | TTTGAAAAGCATCAGTAATA+TGG | + | chr1.3:63559438-63559457 | None:intergenic | 25.0% |
| AAGTGATCAAGGATCATAAA+TGG | - | chr1.3:63560217-63560236 | MS.gene005767:intron | 30.0% | |
| AATGTCAAAGTTATAGTCGT+GGG | - | chr1.3:63559785-63559804 | MS.gene005767:intron | 30.0% | |
| AGATAGAAGTGGAACTAAAT+TGG | - | chr1.3:63558610-63558629 | MS.gene005767:intron | 30.0% | |
| ATATCTTCAGCTATTCCATA+AGG | + | chr1.3:63560802-63560821 | None:intergenic | 30.0% | |
| ATGCTTCCAACAAATATTTG+AGG | - | chr1.3:63558826-63558845 | MS.gene005767:intron | 30.0% | |
| ATGTTCTAATTCAACAATGC+AGG | - | chr1.3:63559462-63559481 | MS.gene005767:intron | 30.0% | |
| ATTAATTACCATTGCAGTCT+CGG | - | chr1.3:63559119-63559138 | MS.gene005767:CDS | 30.0% | |
| ATTGCAGTTGGTTAATATAC+AGG | - | chr1.3:63558117-63558136 | MS.gene005767:intron | 30.0% | |
| CCTAATAATTTCAGAGCAAT+AGG | + | chr1.3:63559318-63559337 | None:intergenic | 30.0% | |
| CTGCATTAAAATACACATGA+AGG | + | chr1.3:63559890-63559909 | None:intergenic | 30.0% | |
| CTTGCTTTGTATTCAACTTA+TGG | - | chr1.3:63557719-63557738 | MS.gene005767:CDS | 30.0% | |
| GTGATCTTCAATTACATGTA+CGG | + | chr1.3:63558475-63558494 | None:intergenic | 30.0% | |
| GTGTCAAATATGACAATATG+GGG | - | chr1.3:63560129-63560148 | MS.gene005767:intron | 30.0% | |
| GTTCACTGAAAAAGTTCAAA+AGG | - | chr1.3:63560251-63560270 | MS.gene005767:intron | 30.0% | |
| TAATGCATTTACCAATGTTC+AGG | + | chr1.3:63561108-63561127 | None:intergenic | 30.0% | |
| TAGCAACATTAGGAACAATA+AGG | + | chr1.3:63559866-63559885 | None:intergenic | 30.0% | |
| TCTCAAATTATTATCCGTGT+CGG | + | chr1.3:63557909-63557928 | None:intergenic | 30.0% | |
| TGAAATTATTAGGATCGGAA+AGG | - | chr1.3:63559325-63559344 | MS.gene005767:intron | 30.0% | |
| TGAAGATCACACTACAATTA+AGG | - | chr1.3:63558485-63558504 | MS.gene005767:CDS | 30.0% | |
| TGGTGCACTTATTCAAAAAT+GGG | - | chr1.3:63560379-63560398 | MS.gene005767:intron | 30.0% | |
| TGTATCTAGAGGAGTTAATA+TGG | + | chr1.3:63558948-63558967 | None:intergenic | 30.0% | |
| TTGCAGTTGGTTAATATACA+GGG | - | chr1.3:63558118-63558137 | MS.gene005767:intron | 30.0% | |
| TTGTATCAATTCAGCTTCTT+GGG | - | chr1.3:63557514-63557533 | MS.gene005767:CDS | 30.0% | |
| TTTGTATCAATTCAGCTTCT+TGG | - | chr1.3:63557513-63557532 | MS.gene005767:CDS | 30.0% | |
| ! | AGAATTTTGTTAAGGAGGAT+TGG | - | chr1.3:63557795-63557814 | MS.gene005767:intron | 30.0% |
| ! | ATCTGAAGCATATTGTGATT+TGG | - | chr1.3:63558378-63558397 | MS.gene005767:intron | 30.0% |
| ! | TAGCAGTTTAGGATCAAATA+TGG | - | chr1.3:63558897-63558916 | MS.gene005767:CDS | 30.0% |
| ! | TATATGAAAATGCCCGTTTT+TGG | - | chr1.3:63559388-63559407 | MS.gene005767:CDS | 30.0% |
| ! | TCTGAAGCATATTGTGATTT+GGG | - | chr1.3:63558379-63558398 | MS.gene005767:intron | 30.0% |
| !! | AAGAGTAAAGTTACTGACTT+TGG | + | chr1.3:63557481-63557500 | None:intergenic | 30.0% |
| !! | CAAATGATTTAGTTCTGAGA+CGG | + | chr1.3:63558979-63558998 | None:intergenic | 30.0% |
| !! | CCTATTGCTCTGAAATTATT+AGG | - | chr1.3:63559315-63559334 | MS.gene005767:intron | 30.0% |
| !! | TATTAGCATTGATCCTTATG+AGG | - | chr1.3:63559536-63559555 | MS.gene005767:CDS | 30.0% |
| !! | TGCTCTGAAATTATTAGGAT+CGG | - | chr1.3:63559320-63559339 | MS.gene005767:intron | 30.0% |
| !! | TTCCAATCATCTACTTTTCA+AGG | - | chr1.3:63559158-63559177 | MS.gene005767:CDS | 30.0% |
| !!! | AAAGCATGGAAATTTTTTGC+AGG | + | chr1.3:63559947-63559966 | None:intergenic | 30.0% |
| !!! | AGTTTTATTCATTAGGGAGA+TGG | - | chr1.3:63560915-63560934 | MS.gene005767:intron | 30.0% |
| !!! | TTTTTATGTTAGCTTGCATC+TGG | - | chr1.3:63559270-63559289 | MS.gene005767:intron | 30.0% |
| AAACTAAAACTCTGGTATGG+GGG | + | chr1.3:63558284-63558303 | None:intergenic | 35.0% | |
| AACTCGTTTAGATGAGAACA+GGG | - | chr1.3:63559967-63559986 | MS.gene005767:intron | 35.0% | |
| ACATGAAGGTTAGCAACATT+AGG | + | chr1.3:63559876-63559895 | None:intergenic | 35.0% | |
| AGCAAACTAAAACTCTGGTA+TGG | + | chr1.3:63558287-63558306 | None:intergenic | 35.0% | |
| AGGAATGATCAAAGATCGTA+TGG | + | chr1.3:63560447-63560466 | None:intergenic | 35.0% | |
| ATACACGCATACTCCAAAAA+CGG | + | chr1.3:63559404-63559423 | None:intergenic | 35.0% | |
| ATCCTTGATCACTTCTTTGA+CGG | + | chr1.3:63560211-63560230 | None:intergenic | 35.0% | |
| ATCTAGAGGAGTTAATATGG+AGG | + | chr1.3:63558945-63558964 | None:intergenic | 35.0% | |
| ATCTTACCATGTGTACAACA+GGG | - | chr1.3:63559734-63559753 | MS.gene005767:intron | 35.0% | |
| ATTCTGGCATTTAAGAAGTC+AGG | + | chr1.3:63560177-63560196 | None:intergenic | 35.0% | |
| ATTGGCCAAACGAAACAAAT+TGG | + | chr1.3:63559063-63559082 | None:intergenic | 35.0% | |
| CAAACTAAAACTCTGGTATG+GGG | + | chr1.3:63558285-63558304 | None:intergenic | 35.0% | |
| CAAGGATCATAAATGGTTAG+AGG | - | chr1.3:63560224-63560243 | MS.gene005767:intron | 35.0% | |
| CAATGTCAAAGTTATAGTCG+TGG | - | chr1.3:63559784-63559803 | MS.gene005767:intron | 35.0% | |
| CACAAACTGAACAAAAGAGT+AGG | + | chr1.3:63558670-63558689 | None:intergenic | 35.0% | |
| CACAATTGAGAGACTGTTAA+AGG | - | chr1.3:63558339-63558358 | MS.gene005767:intron | 35.0% | |
| CACCTCTCAATCATCATTTA+CGG | + | chr1.3:63558310-63558329 | None:intergenic | 35.0% | |
| CACCTTGAAAAGTAGATGAT+TGG | + | chr1.3:63559163-63559182 | None:intergenic | 35.0% | |
| CATCTAAACGAGTTAAAGCA+TGG | + | chr1.3:63559961-63559980 | None:intergenic | 35.0% | |
| CTAAATTGCATGGCCATTAA+AGG | + | chr1.3:63559235-63559254 | None:intergenic | 35.0% | |
| CTGAAGCATATTGTGATTTG+GGG | - | chr1.3:63558380-63558399 | MS.gene005767:intron | 35.0% | |
| CTTGACTGAAAAGTAAAAGC+AGG | + | chr1.3:63557554-63557573 | None:intergenic | 35.0% | |
| GCAAACTAAAACTCTGGTAT+GGG | + | chr1.3:63558286-63558305 | None:intergenic | 35.0% | |
| GGTGCACTTATTCAAAAATG+GGG | - | chr1.3:63560380-63560399 | MS.gene005767:intron | 35.0% | |
| GTGGTGCACTTATTCAAAAA+TGG | - | chr1.3:63560378-63560397 | MS.gene005767:intron | 35.0% | |
| TAACTCGTTTAGATGAGAAC+AGG | - | chr1.3:63559966-63559985 | MS.gene005767:intron | 35.0% | |
| TAATATACAGGGATAGAGGT+CGG | - | chr1.3:63558129-63558148 | MS.gene005767:intron | 35.0% | |
| TAATGACATCCTATGAAGCA+CGG | + | chr1.3:63558002-63558021 | None:intergenic | 35.0% | |
| TATACCACTGGAAATCCTTA+TGG | - | chr1.3:63560784-63560803 | MS.gene005767:intron | 35.0% | |
| TATCTTACCATGTGTACAAC+AGG | - | chr1.3:63559733-63559752 | MS.gene005767:intron | 35.0% | |
| TATTCCATAAGGATTTCCAG+TGG | + | chr1.3:63560791-63560810 | None:intergenic | 35.0% | |
| TCTTAAATGCCAGAATCGAT+GGG | - | chr1.3:63560181-63560200 | MS.gene005767:intron | 35.0% | |
| TGGTGATTATGAACTTGTCA+AGG | - | chr1.3:63560935-63560954 | MS.gene005767:intron | 35.0% | |
| TGGTTAATATACAGGGATAG+AGG | - | chr1.3:63558125-63558144 | MS.gene005767:intron | 35.0% | |
| TTAATTACCATTGCAGTCTC+GGG | - | chr1.3:63559120-63559139 | MS.gene005767:CDS | 35.0% | |
| TTCTGGCATTTAAGAAGTCA+GGG | + | chr1.3:63560176-63560195 | None:intergenic | 35.0% | |
| TTCTTAAATGCCAGAATCGA+TGG | - | chr1.3:63560180-63560199 | MS.gene005767:intron | 35.0% | |
| TTGCAATTACATACAATGCC+AGG | - | chr1.3:63560759-63560778 | MS.gene005767:intron | 35.0% | |
| TTGTTTGATTGTTAGAGAGG+TGG | - | chr1.3:63560359-63560378 | MS.gene005767:intron | 35.0% | |
| ! | AAGCTGACTTTGTATTGCAA+GGG | + | chr1.3:63559814-63559833 | None:intergenic | 35.0% |
| ! | ACTCTTTATTTCCTTTGCTG+AGG | - | chr1.3:63559505-63559524 | MS.gene005767:intron | 35.0% |
| ! | ATTTTGTTAAGGAGGATTGG+TGG | - | chr1.3:63557798-63557817 | MS.gene005767:intron | 35.0% |
| ! | CATAAATGGGCAGATTTTTG+CGG | - | chr1.3:63559638-63559657 | MS.gene005767:intron | 35.0% |
| ! | CTCTTTATTTCCTTTGCTGA+GGG | - | chr1.3:63559506-63559525 | MS.gene005767:intron | 35.0% |
| ! | GCATCCTTTCAAATTTTCCA+TGG | - | chr1.3:63559008-63559027 | MS.gene005767:intron | 35.0% |
| ! | TGTAATTATAGGTGTCGTGT+CGG | - | chr1.3:63557945-63557964 | MS.gene005767:intron | 35.0% |
| ! | TTGGGAGCAGAATTTTGTTA+AGG | - | chr1.3:63557787-63557806 | MS.gene005767:intron | 35.0% |
| !! | ATTCGAAGCATCGTGTATAT+AGG | - | chr1.3:63558574-63558593 | MS.gene005767:CDS | 35.0% |
| !! | TTCAGAGCAATAGGTTGATT+TGG | + | chr1.3:63559309-63559328 | None:intergenic | 35.0% |
| !! | TTTACTTTTCAGTCAAGTGC+AGG | - | chr1.3:63557557-63557576 | MS.gene005767:intron | 35.0% |
| !! | TTTTCAAGGTGAGTGTATCT+TGG | - | chr1.3:63559172-63559191 | MS.gene005767:CDS | 35.0% |
| !!! | GAAGCTTTTTGGCTATCAAT+TGG | + | chr1.3:63558731-63558750 | None:intergenic | 35.0% |
| AAAATACACGTGAATGCGCA+TGG | + | chr1.3:63560624-63560643 | None:intergenic | 40.0% | |
| AAATACACGTGAATGCGCAT+GGG | + | chr1.3:63560623-63560642 | None:intergenic | 40.0% | |
| AACTAAAACTCTGGTATGGG+GGG | + | chr1.3:63558283-63558302 | None:intergenic | 40.0% | |
| AAGAGTAAGCCTGATTGCTA+TGG | - | chr1.3:63557606-63557625 | MS.gene005767:intron | 40.0% | |
| ACTCACAGCCTTCAAATCAT+AGG | + | chr1.3:63557646-63557665 | None:intergenic | 40.0% | |
| AGTAGAAAACCAATCACCCT+CGG | + | chr1.3:63560474-63560493 | None:intergenic | 40.0% | |
| ATAACAACTTCCCTCAGCAA+AGG | + | chr1.3:63559519-63559538 | None:intergenic | 40.0% | |
| ATAGCAATCAGGCTTACTCT+TGG | + | chr1.3:63557607-63557626 | None:intergenic | 40.0% | |
| ATGACTGAAATCGTCTGATG+CGG | - | chr1.3:63558443-63558462 | MS.gene005767:CDS | 40.0% | |
| ATTGGCGGAGAAAAAATGTG+TGG | - | chr1.3:63561178-63561197 | MS.gene005767:intron | 40.0% | |
| CACAACTCTCATTTCTCTCT+AGG | - | chr1.3:63557377-63557396 | MS.gene005767:intron | 40.0% | |
| CAGCCTTCAAATCATAGGTA+AGG | + | chr1.3:63557641-63557660 | None:intergenic | 40.0% | |
| CGGCTTTGCTAGACATAAAT+GGG | - | chr1.3:63559625-63559644 | MS.gene005767:intron | 40.0% | |
| CGGTGAATCTTTGTATCTAG+AGG | + | chr1.3:63558959-63558978 | None:intergenic | 40.0% | |
| CTCAGTGGAACTAAATTGCA+TGG | + | chr1.3:63559245-63559264 | None:intergenic | 40.0% | |
| CTCCGTAAATGATGATTGAG+AGG | - | chr1.3:63558305-63558324 | MS.gene005767:CDS | 40.0% | |
| CTGCCTTACCTATGATTTGA+AGG | - | chr1.3:63557635-63557654 | MS.gene005767:intron | 40.0% | |
| CTTGCAATACAAAGTCAGCT+TGG | - | chr1.3:63559813-63559832 | MS.gene005767:intron | 40.0% | |
| GTGTTCATGTCGGTGTATTA+GGG | + | chr1.3:63557867-63557886 | None:intergenic | 40.0% | |
| TAATACACCGACATGAACAC+CGG | - | chr1.3:63557867-63557886 | MS.gene005767:CDS | 40.0% | |
| TACACGCATACTCCAAAAAC+GGG | + | chr1.3:63559403-63559422 | None:intergenic | 40.0% | |
| TACGGAGCAAACTAAAACTC+TGG | + | chr1.3:63558292-63558311 | None:intergenic | 40.0% | |
| TAGCAATCAGGCTTACTCTT+GGG | + | chr1.3:63557606-63557625 | None:intergenic | 40.0% | |
| TATTCAGTGTGCCTGAACAT+TGG | - | chr1.3:63561094-63561113 | MS.gene005767:CDS | 40.0% | |
| TCAGACTCAGTCACCTTTAA+TGG | - | chr1.3:63559219-63559238 | MS.gene005767:intron | 40.0% | |
| TCCTCTTCCTGTAAACACAT+TGG | + | chr1.3:63559081-63559100 | None:intergenic | 40.0% | |
| TCCTTGATCACTTCTTTGAC+GGG | + | chr1.3:63560210-63560229 | None:intergenic | 40.0% | |
| TTGGAGTATGCGTGTATCAT+AGG | - | chr1.3:63559407-63559426 | MS.gene005767:intron | 40.0% | |
| ! | CAAGCTGACTTTGTATTGCA+AGG | + | chr1.3:63559815-63559834 | None:intergenic | 40.0% |
| ! | CTTGCATCTGGTGAAGTTTT+TGG | - | chr1.3:63559282-63559301 | MS.gene005767:intron | 40.0% |
| ! | GGAGCAGAATTTTGTTAAGG+AGG | - | chr1.3:63557790-63557809 | MS.gene005767:intron | 40.0% |
| ! | TTTTTGCGGAGCAGGTAAAT+TGG | - | chr1.3:63559652-63559671 | MS.gene005767:intron | 40.0% |
| !! | ATTGCTGTTTGTGATCTACC+TGG | - | chr1.3:63561326-63561345 | MS.gene005767:CDS | 40.0% |
| !! | GGCTTTAGTGCATGATTTTG+TGG | - | chr1.3:63557740-63557759 | MS.gene005767:CDS | 40.0% |
| AAATGTGTGGCTCACCTAAC+CGG | - | chr1.3:63561191-63561210 | MS.gene005767:intron | 45.0% | |
| AACCGGCGAGGTAAATATTG+CGG | - | chr1.3:63561208-63561227 | MS.gene005767:intron | 45.0% | |
| AATATTGCAGCCGCAATTGC+GGG | - | chr1.3:63558540-63558559 | MS.gene005767:CDS | 45.0% | |
| ACACTTGCCTTTGATCGACA+CGG | + | chr1.3:63560838-63560857 | None:intergenic | 45.0% | |
| ACTAAAACTCTGGTATGGGG+GGG | + | chr1.3:63558282-63558301 | None:intergenic | 45.0% | |
| AGGAAGAGGAGACAAAATCC+TGG | - | chr1.3:63559091-63559110 | MS.gene005767:CDS | 45.0% | |
| AGGGATAGAGGTCGGTAATA+TGG | - | chr1.3:63558137-63558156 | MS.gene005767:intron | 45.0% | |
| AGGTCATTGCAAGCTCTTGA+AGG | - | chr1.3:63559345-63559364 | MS.gene005767:CDS | 45.0% | |
| AGGTGTTCCAAGATGCAGAA+TGG | - | chr1.3:63559556-63559575 | MS.gene005767:CDS | 45.0% | |
| AGTAGCAGTTGTCACGATTG+CGG | - | chr1.3:63558171-63558190 | MS.gene005767:intron | 45.0% | |
| ATGCTCCCAGGAGAAATGTA+AGG | - | chr1.3:63561356-63561375 | MS.gene005767:CDS | 45.0% | |
| CAATATTGCAGCCGCAATTG+CGG | - | chr1.3:63558539-63558558 | MS.gene005767:CDS | 45.0% | |
| CAGAAGACACCATAGCAATC+AGG | + | chr1.3:63557618-63557637 | None:intergenic | 45.0% | |
| CCTACGACAGAAATTAGCCA+AGG | - | chr1.3:63560977-63560996 | MS.gene005767:intron | 45.0% | |
| CCTTGGCTAATTTCTGTCGT+AGG | + | chr1.3:63560980-63560999 | None:intergenic | 45.0% | |
| CGTTTGGCCAATGTGTTTAC+AGG | - | chr1.3:63559071-63559090 | MS.gene005767:CDS | 45.0% | |
| CTCAAGTTTCAGACTCACCT+TGG | + | chr1.3:63560997-63561016 | None:intergenic | 45.0% | |
| GACAGAAGCTGAGTTATTGG+CGG | - | chr1.3:63561163-63561182 | MS.gene005767:intron | 45.0% | |
| GATTTCCAGTGGTATACACC+TGG | + | chr1.3:63560780-63560799 | None:intergenic | 45.0% | |
| GCAGACAGAAGCTGAGTTAT+TGG | - | chr1.3:63561160-63561179 | MS.gene005767:intron | 45.0% | |
| GCATCTTGGAACACCTCATA+AGG | + | chr1.3:63559552-63559571 | None:intergenic | 45.0% | |
| GCATGTTGAGTTCTGTGAAG+TGG | + | chr1.3:63557436-63557455 | None:intergenic | 45.0% | |
| GCCAATGTGTTTACAGGAAG+AGG | - | chr1.3:63559077-63559096 | MS.gene005767:CDS | 45.0% | |
| GCGGCTTTGCTAGACATAAA+TGG | - | chr1.3:63559624-63559643 | MS.gene005767:intron | 45.0% | |
| GCTAAGACAGCAACCCATAA+AGG | + | chr1.3:63558881-63558900 | None:intergenic | 45.0% | |
| GGTGTTCATGTCGGTGTATT+AGG | + | chr1.3:63557868-63557887 | None:intergenic | 45.0% | |
| GGTGTTCCAAGATGCAGAAT+GGG | - | chr1.3:63559557-63559576 | MS.gene005767:CDS | 45.0% | |
| GGTTGCTGTCTTAGCAGTTT+AGG | - | chr1.3:63558886-63558905 | MS.gene005767:CDS | 45.0% | |
| GTAGAAAACCAATCACCCTC+GGG | + | chr1.3:63560473-63560492 | None:intergenic | 45.0% | |
| TGAGAACAGGGCAAAATGTC+AGG | - | chr1.3:63559979-63559998 | MS.gene005767:intron | 45.0% | |
| TGCTCCCAGGAGAAATGTAA+GGG | - | chr1.3:63561357-63561376 | MS.gene005767:CDS | 45.0% | |
| TTACATTTCTCCTGGGAGCA+TGG | + | chr1.3:63561357-63561376 | None:intergenic | 45.0% | |
| TTGATCATTCCTACTCCCGA+GGG | - | chr1.3:63560455-63560474 | MS.gene005767:intron | 45.0% | |
| TTTGATCATTCCTACTCCCG+AGG | - | chr1.3:63560454-63560473 | MS.gene005767:intron | 45.0% | |
| ! | AAAGTACAGTGATGGTGCCT+AGG | + | chr1.3:63557409-63557428 | None:intergenic | 45.0% |
| ! | CAATATTTACCTCGCCGGTT+AGG | + | chr1.3:63561208-63561227 | None:intergenic | 45.0% |
| ! | GCAGAATGGGCTTTGCTAAT+AGG | - | chr1.3:63559570-63559589 | MS.gene005767:CDS | 45.0% |
| ! | GCTTTTCCCTGTTGTACACA+TGG | + | chr1.3:63559743-63559762 | None:intergenic | 45.0% |
| ! | GTGGTGCTAAAGTACAGTGA+TGG | + | chr1.3:63557417-63557436 | None:intergenic | 45.0% |
| !! | ACAGGGAAAAGCACTCAATG+CGG | - | chr1.3:63559751-63559770 | MS.gene005767:intron | 45.0% |
| !! | TTCTCTCTAGGACTCTTCCT+AGG | - | chr1.3:63557389-63557408 | MS.gene005767:intron | 45.0% |
| !!! | GAGGGTGATTGGTTTTCTAC+TGG | - | chr1.3:63560473-63560492 | MS.gene005767:intron | 45.0% |
| AAATATTGCGGCCCGAATCG+CGG | - | chr1.3:63561220-63561239 | MS.gene005767:CDS | 50.0% | |
| ATTAAGGTGTGACGCCGTTG+AGG | - | chr1.3:63558501-63558520 | MS.gene005767:CDS | 50.0% | |
| CAATGCCAGGTGTATACCAC+TGG | - | chr1.3:63560772-63560791 | MS.gene005767:intron | 50.0% | |
| CAATGTGTAGCTAGCCCTGA+AGG | - | chr1.3:63560086-63560105 | MS.gene005767:intron | 50.0% | |
| CTAATAGGTGCAAAGCCTCG+AGG | - | chr1.3:63559585-63559604 | MS.gene005767:CDS | 50.0% | |
| GCAAAGCCCATTCTGCATCT+TGG | + | chr1.3:63559566-63559585 | None:intergenic | 50.0% | |
| GCCCGTCAAAGAAGTGATCA+AGG | - | chr1.3:63560206-63560225 | MS.gene005767:intron | 50.0% | |
| GGGAAACCACTCAACTACTC+AGG | - | chr1.3:63560149-63560168 | MS.gene005767:intron | 50.0% | |
| GTAGAAGACACCTGCCTTCA+GGG | + | chr1.3:63560103-63560122 | None:intergenic | 50.0% | |
| TGTCACGATTGCGGTCATTG+TGG | - | chr1.3:63558180-63558199 | MS.gene005767:intron | 50.0% | |
| TGTTGTGGTAGCCTCCTCAA+CGG | + | chr1.3:63558518-63558537 | None:intergenic | 50.0% | |
| TGTTTGCGTAGACCGCGATT+CGG | + | chr1.3:63561235-63561254 | None:intergenic | 50.0% | |
| ! | CAACAATGCAGGTGTTGCGA+TGG | - | chr1.3:63559473-63559492 | MS.gene005767:intron | 50.0% |
| ! | CAGTATGCCGTGTCGATCAA+AGG | - | chr1.3:63560828-63560847 | MS.gene005767:intron | 50.0% |
| ! | CGGCTGCAATATTGCTGTTG+TGG | + | chr1.3:63558533-63558552 | None:intergenic | 50.0% |
| ! | GACTGAGTCTGAGACTGCAA+TGG | + | chr1.3:63559211-63559230 | None:intergenic | 50.0% |
| ! | TATAGGTGTCGTGTCGGTGT+CGG | - | chr1.3:63557951-63557970 | MS.gene005767:intron | 50.0% |
| ! | TATTATCCGTGTCGGCGTGT+CGG | + | chr1.3:63557901-63557920 | None:intergenic | 50.0% |
| !! | CTTCAGGGCTAGCTACACAT+TGG | + | chr1.3:63560088-63560107 | None:intergenic | 50.0% |
| AAAGCCTCGAGGACCTGGAA+TGG | - | chr1.3:63559596-63559615 | MS.gene005767:intron | 55.0% | |
| AACCAATCACCCTCGGGAGT+AGG | + | chr1.3:63560467-63560486 | None:intergenic | 55.0% | |
| AACTCTGGTATGGGGGGGTA+CGG | + | chr1.3:63558277-63558296 | None:intergenic | 55.0% | |
| CAGGGACCTGAGTAGTTGAG+TGG | + | chr1.3:63560158-63560177 | None:intergenic | 55.0% | |
| CGTAGAAGACACCTGCCTTC+AGG | + | chr1.3:63560104-63560123 | None:intergenic | 55.0% | |
| GGATCCTGTGTCTGTACTGC+TGG | + | chr1.3:63557585-63557604 | None:intergenic | 55.0% | |
| GGCCGCAATATTTACCTCGC+CGG | + | chr1.3:63561213-63561232 | None:intergenic | 55.0% | |
| GTCGTGTCCGGTGTTCATGT+CGG | + | chr1.3:63557877-63557896 | None:intergenic | 55.0% | |
| GTTTGCGTAGACCGCGATTC+GGG | + | chr1.3:63561234-63561253 | None:intergenic | 55.0% | |
| TTCCTACTCCCGAGGGTGAT+TGG | - | chr1.3:63560462-63560481 | MS.gene005767:intron | 55.0% | |
| ! | AGGTGTTGCGATGGAGTTGG+AGG | - | chr1.3:63559482-63559501 | MS.gene005767:intron | 55.0% |
| ! | TGCAGGTGTTGCGATGGAGT+TGG | - | chr1.3:63559479-63559498 | MS.gene005767:intron | 55.0% |
| ! | TGGGCAGATTTTTGCGGAGC+AGG | - | chr1.3:63559644-63559663 | MS.gene005767:intron | 55.0% |
| AAAGCCGCACGCTCCATTCC+AGG | + | chr1.3:63559612-63559631 | None:intergenic | 60.0% | |
| AAGGTGTGACGCCGTTGAGG+AGG | - | chr1.3:63558504-63558523 | MS.gene005767:CDS | 60.0% | |
| AGGACCTGGAATGGAGCGTG+CGG | - | chr1.3:63559605-63559624 | MS.gene005767:intron | 60.0% | |
| ATGCGCATGGGTCCCGACAT+TGG | + | chr1.3:63560611-63560630 | None:intergenic | 60.0% | |
| CCTGGTGATACCATGCTCCC+AGG | - | chr1.3:63561344-63561363 | MS.gene005767:CDS | 60.0% | |
| CGGACACGCGTCCTAATCTG+AGG | - | chr1.3:63557971-63557990 | MS.gene005767:intron | 60.0% | |
| GCACGGACGCTCCTCAGATT+AGG | + | chr1.3:63557985-63558004 | None:intergenic | 60.0% | |
| GTGTAGCTAGCCCTGAAGGC+AGG | - | chr1.3:63560090-63560109 | MS.gene005767:intron | 60.0% | |
| TGCAGCACCCGAGACTGCAA+TGG | + | chr1.3:63559130-63559149 | None:intergenic | 60.0% | |
| ! | ATTGCAGTCTCGGGTGCTGC+AGG | - | chr1.3:63559129-63559148 | MS.gene005767:CDS | 60.0% |
| ! | CCTGGGAGCATGGTATCACC+AGG | + | chr1.3:63561347-63561366 | None:intergenic | 60.0% |
| !! | GACGGGCAACCCATCGATTC+TGG | + | chr1.3:63560193-63560212 | None:intergenic | 60.0% |
| !! | GAGGAGCGTCCGTGCTTCAT+AGG | - | chr1.3:63557990-63558009 | MS.gene005767:intron | 60.0% |
| ACGACACCGACACGCCGACA+CGG | - | chr1.3:63557892-63557911 | MS.gene005767:CDS | 65.0% | |
| CGCTCCATTCCAGGTCCTCG+AGG | + | chr1.3:63559603-63559622 | None:intergenic | 65.0% | |
| GCAGTCCGCACCCGCAATTG+CGG | + | chr1.3:63558553-63558572 | None:intergenic | 65.0% | |
| GGCGCCAGCAGTACAGACAC+AGG | - | chr1.3:63557578-63557597 | MS.gene005767:intron | 65.0% | |
| GGTGCAAAGCCTCGAGGACC+TGG | - | chr1.3:63559591-63559610 | MS.gene005767:intron | 65.0% | |
| TGCAGCCGCAATTGCGGGTG+CGG | - | chr1.3:63558545-63558564 | MS.gene005767:CDS | 65.0% | |
| TGTGGCTCACCTAACCGGCG+AGG | - | chr1.3:63561196-63561215 | MS.gene005767:intron | 65.0% | |
| !! | CGGCGTGTCGGTGTCGTGTC+CGG | + | chr1.3:63557889-63557908 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 63557322 | 63561376 | 63557322 | ID=MS.gene005767 |
| chr1.3 | mRNA | 63557322 | 63561376 | 63557322 | ID=MS.gene005767.t1;Parent=MS.gene005767 |
| chr1.3 | exon | 63561216 | 63561376 | 63561216 | ID=MS.gene005767.t1.exon1;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63561216 | 63561376 | 63561216 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63561039 | 63561129 | 63561039 | ID=MS.gene005767.t1.exon2;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63561039 | 63561129 | 63561039 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63559519 | 63559605 | 63559519 | ID=MS.gene005767.t1.exon3;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63559519 | 63559605 | 63559519 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63559332 | 63559416 | 63559332 | ID=MS.gene005767.t1.exon4;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63559332 | 63559416 | 63559332 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63559033 | 63559214 | 63559033 | ID=MS.gene005767.t1.exon5;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63559033 | 63559214 | 63559033 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63558873 | 63558943 | 63558873 | ID=MS.gene005767.t1.exon6;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63558873 | 63558943 | 63558873 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63558698 | 63558788 | 63558698 | ID=MS.gene005767.t1.exon7;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63558698 | 63558788 | 63558698 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63558426 | 63558602 | 63558426 | ID=MS.gene005767.t1.exon8;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63558426 | 63558602 | 63558426 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63558202 | 63558324 | 63558202 | ID=MS.gene005767.t1.exon9;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63558202 | 63558324 | 63558202 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63557849 | 63557917 | 63557849 | ID=MS.gene005767.t1.exon10;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63557849 | 63557917 | 63557849 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63557700 | 63557768 | 63557700 | ID=MS.gene005767.t1.exon11;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63557700 | 63557768 | 63557700 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63557481 | 63557534 | 63557481 | ID=MS.gene005767.t1.exon12;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63557481 | 63557534 | 63557481 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| chr1.3 | exon | 63557322 | 63557375 | 63557322 | ID=MS.gene005767.t1.exon13;Parent=MS.gene005767.t1 |
| chr1.3 | CDS | 63557322 | 63557375 | 63557322 | ID=cds.MS.gene005767.t1;Parent=MS.gene005767.t1 |
| Gene Sequence |
| Protein sequence |
