AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67341

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67341.t1 MTR_2g435340 97.566 452 11 0 1 452 1 452 0.0 900
MS.gene67341.t1 MTR_2g435340 96.542 347 12 0 106 452 41 387 0.0 675
MS.gene67341.t1 MTR_4g120730 74.533 428 107 1 12 437 13 440 0.0 660
MS.gene67341.t1 MTR_7g110710 52.318 453 206 5 2 449 7 454 1.29e-167 480
MS.gene67341.t1 MTR_7g110710 52.318 453 206 5 2 449 7 454 1.41e-167 479
MS.gene67341.t1 MTR_1g086030 57.071 396 167 2 33 428 78 470 1.43e-162 469
MS.gene67341.t1 MTR_8g098840 50.761 394 193 1 33 425 40 433 1.22e-146 426
MS.gene67341.t1 MTR_7g088550 48.592 426 214 3 8 428 20 445 1.17e-145 424
MS.gene67341.t1 MTR_1g100050 47.319 429 224 2 2 428 14 442 2.05e-144 421
MS.gene67341.t1 MTR_1g100060 48.662 411 206 2 23 428 75 485 2.96e-141 414
MS.gene67341.t1 MTR_1g099850 49.874 397 198 1 33 428 51 447 3.72e-141 413
MS.gene67341.t1 MTR_3g449590 49.395 413 195 4 33 439 43 447 8.19e-140 408
MS.gene67341.t1 MTR_1g100040 48.139 403 208 1 28 429 47 449 3.17e-139 408
MS.gene67341.t1 MTR_7g078680 46.098 410 220 1 33 441 51 460 5.46e-136 400
MS.gene67341.t1 MTR_8g028725 44.719 445 242 2 1 441 16 460 2.32e-134 395
MS.gene67341.t1 MTR_5g090160 49.752 404 196 4 30 428 37 438 3.67e-129 381
MS.gene67341.t1 MTR_3g096330 48.786 412 207 2 32 443 71 478 7.41e-129 391
MS.gene67341.t1 MTR_4g124980 42.995 414 231 3 17 428 57 467 1.34e-124 371
MS.gene67341.t1 MTR_2g042740 44.417 403 220 3 28 428 49 449 9.88e-123 365
MS.gene67341.t1 MTR_1g086030 51.183 338 162 2 91 428 32 366 1.21e-120 358
MS.gene67341.t1 MTR_2g083670 52.273 220 90 1 24 243 27 231 7.23e-71 224
MS.gene67341.t1 MTR_6g048610 35.503 169 72 2 230 398 24 155 7.09e-28 108
MS.gene67341.t1 MTR_2g042750 41.722 151 77 3 33 181 117 258 3.22e-26 108
MS.gene67341.t1 MTR_8g065030 24.574 411 265 14 37 436 65 441 4.01e-21 95.9
MS.gene67341.t1 MTR_7g092470 27.529 425 235 17 30 428 41 418 1.30e-20 94.4
MS.gene67341.t1 MTR_6g005630 26.498 317 194 10 29 339 37 320 2.25e-20 93.2
MS.gene67341.t1 MTR_6g028080 24.939 413 253 15 33 428 27 399 9.06e-20 91.3
MS.gene67341.t1 MTR_5g043350 26.220 328 186 10 38 348 30 318 7.87e-19 88.6
MS.gene67341.t1 MTR_3g084380 25.201 373 224 11 39 398 23 353 2.56e-18 87.0
MS.gene67341.t1 MTR_5g033680 25.153 326 194 11 28 335 47 340 3.73e-18 87.0
MS.gene67341.t1 MTR_5g090140 34.426 183 77 6 250 428 1 144 5.41e-18 81.3
MS.gene67341.t1 MTR_6g005630 25.633 316 175 10 29 339 37 297 1.20e-16 82.0
MS.gene67341.t1 MTR_1g052315 21.446 415 260 12 23 413 46 418 1.29e-16 82.0
MS.gene67341.t1 MTR_8g010040 26.712 438 248 17 2 423 4 384 1.35e-15 78.6
MS.gene67341.t1 MTR_3g054320 24.372 398 245 12 39 422 32 387 2.32e-15 78.2
MS.gene67341.t1 MTR_8g010080 24.919 309 185 9 39 339 33 302 2.33e-15 77.8
MS.gene67341.t1 MTR_5g034090 23.864 352 194 10 28 339 110 427 2.75e-15 78.6
MS.gene67341.t1 MTR_8g077320 28.718 195 126 4 150 339 110 296 3.52e-15 77.0
MS.gene67341.t1 MTR_1g012390 25.307 407 246 15 35 424 26 391 1.18e-14 75.9
MS.gene67341.t1 MTR_7g091840 23.824 319 186 9 39 339 67 346 1.32e-14 75.5
MS.gene67341.t1 MTR_4g084050 24.252 301 187 10 38 330 24 291 1.41e-14 75.5
MS.gene67341.t1 MTR_1g086390 26.019 319 191 10 37 339 81 370 2.15e-14 75.5
MS.gene67341.t1 MTR_2g060350 23.273 275 187 4 150 413 168 429 2.37e-14 75.1
MS.gene67341.t1 MTR_4g094715 27.492 331 185 13 31 339 55 352 3.09e-14 75.1
MS.gene67341.t1 MTR_7g091850 24.060 399 238 12 37 413 76 431 9.38e-14 73.6
MS.gene67341.t1 MTR_7g035415 25.588 340 195 11 23 347 26 322 2.11e-13 71.6
MS.gene67341.t1 MTR_3g084360 23.961 409 250 14 36 425 23 389 1.29e-12 69.7
MS.gene67341.t1 MTR_8g008765 22.946 353 200 11 39 375 33 329 1.34e-12 69.3
MS.gene67341.t1 MTR_8g010110 24.194 310 187 9 39 339 33 303 1.53e-12 69.3
MS.gene67341.t1 MTR_8g010090 22.613 398 246 12 39 422 33 382 1.57e-12 69.3
MS.gene67341.t1 MTR_2g103410 28.643 199 118 5 150 339 157 340 3.91e-12 68.2
MS.gene67341.t1 MTR_2g049400 23.881 402 256 12 36 425 27 390 8.73e-12 67.0
MS.gene67341.t1 MTR_3g030540 23.003 313 210 7 116 413 127 423 2.31e-11 65.9
MS.gene67341.t1 MTR_8g010070 25.962 312 180 12 39 339 33 304 2.76e-11 65.5
MS.gene67341.t1 MTR_4g120320 24.242 363 216 12 2 339 7 335 5.14e-11 64.7
MS.gene67341.t1 MTR_2g032710 25.225 333 196 12 27 340 57 355 7.74e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67341.t1 AT3G16850 63.946 441 152 3 1 440 3 437 0.0 583
MS.gene67341.t1 AT3G06770 63.636 440 154 3 1 434 1 440 0.0 565
MS.gene67341.t1 AT3G06770 63.699 438 153 3 3 434 4 441 0.0 563
MS.gene67341.t1 AT5G49215 65.617 413 140 2 18 428 24 436 0.0 551
MS.gene67341.t1 AT5G49215 65.617 413 140 2 18 428 22 434 0.0 551
MS.gene67341.t1 AT3G06770 65.135 370 129 0 65 434 2 371 2.57e-175 496
MS.gene67341.t1 AT3G06770 65.135 370 129 0 65 434 2 371 2.57e-175 496
MS.gene67341.t1 AT3G62110 53.596 431 197 3 1 428 6 436 1.36e-166 477
MS.gene67341.t1 AT3G62110 53.596 431 197 3 1 428 6 436 1.36e-166 477
MS.gene67341.t1 AT3G06770 60.704 341 134 0 94 434 13 353 3.51e-146 421
MS.gene67341.t1 AT3G48950 49.626 401 200 2 30 428 38 438 6.11e-146 425
MS.gene67341.t1 AT4G23820 48.492 431 212 3 3 428 6 431 1.85e-142 415
MS.gene67341.t1 AT4G23500 50.378 397 196 1 33 428 64 460 1.86e-141 414
MS.gene67341.t1 AT3G61490 44.700 434 234 2 1 428 4 437 4.56e-137 402
MS.gene67341.t1 AT3G61490 44.700 434 234 2 1 428 4 437 4.56e-137 402
MS.gene67341.t1 AT3G61490 44.700 434 234 2 1 428 4 437 4.56e-137 402
MS.gene67341.t1 AT3G61490 44.700 434 234 2 1 428 19 452 9.71e-137 402
MS.gene67341.t1 AT3G61490 44.700 434 234 2 1 428 117 550 9.10e-136 403
MS.gene67341.t1 AT2G23900 46.635 416 218 3 30 443 49 462 1.11e-132 391
MS.gene67341.t1 AT4G33440 47.529 425 220 2 18 440 51 474 6.38e-132 389
MS.gene67341.t1 AT5G41870 46.420 433 220 5 1 428 10 435 9.18e-130 383
MS.gene67341.t1 AT3G42950 41.191 403 233 3 28 428 59 459 2.59e-116 350
MS.gene67341.t1 AT1G19170 42.169 415 235 4 17 428 69 481 3.95e-114 345
MS.gene67341.t1 AT3G15720 27.470 415 251 16 35 436 22 399 5.64e-24 104
MS.gene67341.t1 AT3G15720 27.470 415 251 16 35 436 21 398 5.70e-24 104
MS.gene67341.t1 AT3G15720 27.470 415 248 17 35 436 21 395 4.82e-22 98.6
MS.gene67341.t1 AT1G70500 25.700 393 244 13 37 416 67 424 5.27e-21 95.5
MS.gene67341.t1 AT1G23460 25.313 399 248 14 37 421 43 405 6.76e-21 95.1
MS.gene67341.t1 AT1G23460 25.313 399 248 14 37 421 67 429 9.24e-21 94.7
MS.gene67341.t1 AT2G41850 26.434 401 248 13 34 423 65 429 9.68e-21 94.7
MS.gene67341.t1 AT3G57510 25.455 385 234 12 36 404 67 414 2.41e-20 93.6
MS.gene67341.t1 AT3G15720 27.922 308 191 10 140 436 48 335 6.04e-20 91.7
MS.gene67341.t1 AT3G57790 27.134 328 176 11 36 336 34 325 6.77e-18 86.3
MS.gene67341.t1 AT3G57790 27.134 328 176 11 36 336 34 325 6.77e-18 86.3
MS.gene67341.t1 AT3G26610 25.240 313 193 9 38 339 68 350 8.64e-17 82.8
MS.gene67341.t1 AT5G14650 24.601 313 193 10 36 339 50 328 1.08e-16 82.4
MS.gene67341.t1 AT5G17200 25.987 304 178 8 37 332 39 303 1.33e-16 82.0
MS.gene67341.t1 AT1G48100 28.037 321 176 14 39 339 82 367 4.87e-16 80.5
MS.gene67341.t1 AT3G07970 26.545 275 176 6 150 413 167 426 6.30e-16 80.1
MS.gene67341.t1 AT1G56710 25.625 320 197 9 34 339 45 337 4.83e-15 77.4
MS.gene67341.t1 AT2G15470 25.610 410 254 15 33 425 27 402 2.67e-14 74.7
MS.gene67341.t1 AT1G02790 26.074 349 212 11 34 375 49 358 1.22e-13 72.8
MS.gene67341.t1 AT1G02460 25.857 321 190 12 38 339 90 381 1.47e-13 73.2
MS.gene67341.t1 AT2G43860 24.939 409 253 16 32 425 28 397 2.02e-13 72.0
MS.gene67341.t1 AT2G15460 25.686 401 248 14 33 417 27 393 3.34e-13 71.6
MS.gene67341.t1 AT3G59850 23.821 403 255 13 35 424 21 384 3.84e-13 71.2
MS.gene67341.t1 AT2G43870 24.868 378 233 11 35 399 19 358 4.04e-13 71.2
MS.gene67341.t1 AT3G59850 23.441 401 259 11 35 424 65 428 5.94e-13 70.9
MS.gene67341.t1 AT2G15450 25.245 408 255 14 33 424 27 400 7.69e-13 70.5
MS.gene67341.t1 AT1G17150 24.331 411 251 13 33 424 29 398 8.81e-13 70.1
MS.gene67341.t1 AT5G14650 26.009 223 139 7 36 253 50 251 2.51e-12 68.2
MS.gene67341.t1 AT2G43880 23.383 402 258 15 36 425 30 393 2.64e-12 68.6
MS.gene67341.t1 AT1G80170 24.213 413 258 14 33 425 46 423 3.39e-12 68.6
MS.gene67341.t1 AT1G43080 23.133 415 262 16 33 427 27 404 3.53e-12 68.2
MS.gene67341.t1 AT2G40310 24.455 413 255 16 33 425 27 402 6.86e-12 67.4
MS.gene67341.t1 AT4G13760 24.578 415 252 16 33 425 27 402 2.82e-11 65.5
MS.gene67341.t1 AT1G43100 23.134 402 253 15 33 415 27 391 3.36e-11 65.5
MS.gene67341.t1 AT1G43090 23.134 402 253 15 33 415 27 391 3.71e-11 65.5
MS.gene67341.t1 AT4G01890 25.000 328 182 12 39 339 67 357 6.50e-11 64.7
MS.gene67341.t1 AT3G14040 25.329 304 210 9 135 431 150 443 8.05e-11 64.3

Find 105 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCGTTTCTTCAAGTAAA+TGG 0.088505 7.3:-38184376 MS.gene67341:CDS
AGCAATGCCGTGAATGTTTA+TGG 0.195198 7.3:-38186715 MS.gene67341:CDS
ATGTCGTTTGAATCCTAAAT+TGG 0.263811 7.3:-38186680 MS.gene67341:CDS
ATTGAAGCTTTACCTTCTTA+TGG 0.264280 7.3:-38185876 MS.gene67341:CDS
GGTACTATACCGGCAGTATA+AGG 0.271970 7.3:+38185365 None:intergenic
ATTTCAGCTAAAGGTAATTC+TGG 0.272185 7.3:-38184563 MS.gene67341:CDS
TGCAAAAGTGGAAGTGCTTT+TGG 0.294030 7.3:+38184515 None:intergenic
AGTGTCTCTATATTGGAATT+TGG 0.299161 7.3:-38186643 MS.gene67341:CDS
ATTATTTACCTGCAATAAAC+AGG 0.300438 7.3:+38185515 None:intergenic
CCACCAGGAAACTGGCTTAC+TGG 0.322724 7.3:-38186520 MS.gene67341:CDS
TATGTAACCACCTCTTCCTT+TGG 0.328460 7.3:+38184634 None:intergenic
TGAGATAGAAAATTGCATTC+TGG 0.331713 7.3:+38186581 None:intergenic
TGTGGCCTAGGATCCAATTT+AGG 0.332220 7.3:+38186667 None:intergenic
GATCAGTACGGCATTAAATA+TGG 0.336655 7.3:-38184815 MS.gene67341:CDS
GCCACACAGTGTCTCTATAT+TGG 0.338491 7.3:-38186650 MS.gene67341:CDS
TTGGAAGATGTGGTCATAAC+AGG 0.339246 7.3:-38185798 MS.gene67341:intron
CCGGCAGTATAAGGGGATTC+TGG 0.339380 7.3:+38185374 None:intergenic
GTTCATCTTCGTGCATTTAC+CGG 0.342309 7.3:-38184761 MS.gene67341:CDS
TCTCAAGTCATTTGCTGATA+AGG 0.351226 7.3:-38186563 MS.gene67341:CDS
ACCGGCTCTGCTATTTCATT+TGG 0.351598 7.3:-38184743 MS.gene67341:CDS
GGAAAGAATATCACAATTGC+TGG 0.353969 7.3:-38184467 MS.gene67341:CDS
AAATGTTAACATGCTCTATC+AGG 0.358232 7.3:+38184690 None:intergenic
GGCAATAATGGAACCATTGA+TGG 0.360386 7.3:-38185677 MS.gene67341:CDS
GTACTATACCGGCAGTATAA+GGG 0.366594 7.3:+38185366 None:intergenic
TTTGGATCAAATTTGTCATC+AGG 0.370603 7.3:+38184533 None:intergenic
ATGGAATGGTTTGGTGGGAC+TGG 0.373444 7.3:-38185652 MS.gene67341:CDS
GATGAGGACGACTGTGGTTA+AGG 0.378902 7.3:+38185615 None:intergenic
TCTATGTGCCACCAGGAAAC+TGG 0.379700 7.3:-38186528 MS.gene67341:CDS
TGCTTTATCACACATAGAAA+TGG 0.384138 7.3:-38184603 MS.gene67341:CDS
TTCCGTTTCTTCAAGTAAAT+GGG 0.384317 7.3:-38184375 MS.gene67341:CDS
TATACAGCAATTTCAGCTAA+AGG 0.395099 7.3:-38184572 MS.gene67341:CDS
TGCTGTCATTATTGGATCTC+AGG 0.395803 7.3:-38186452 MS.gene67341:intron
CTTATATGTACTTTCTCACT+TGG 0.401622 7.3:+38184788 None:intergenic
CCAAGTTCTTGACAAGGTTT+AGG 0.403560 7.3:+38184314 None:intergenic
ATAACATTGAAGGATATAAC+TGG 0.408428 7.3:-38184488 MS.gene67341:CDS
GCATCCACCCTGTTTATTGC+AGG 0.409422 7.3:-38185523 MS.gene67341:intron
AACCATTCCATTGCCATCAA+TGG 0.414602 7.3:+38185664 None:intergenic
AGATACAAGAGCTTGATAAA+TGG 0.415928 7.3:-38185828 MS.gene67341:CDS
CTCAAGTCATTTGCTGATAA+GGG 0.419974 7.3:-38186562 MS.gene67341:CDS
CCTAAACCTTGTCAAGAACT+TGG 0.423904 7.3:-38184314 MS.gene67341:CDS
TGAATCCTAAATTGGATCCT+AGG 0.429800 7.3:-38186672 MS.gene67341:CDS
TTCCCATTTACTTGAAGAAA+CGG 0.430980 7.3:+38184373 None:intergenic
ATATTGGAATTTGGAGCAGT+TGG 0.436498 7.3:-38186634 MS.gene67341:CDS
TTTGCATCACATAACATTGA+AGG 0.443614 7.3:-38184498 MS.gene67341:CDS
CTACCAGTAAGCCAGTTTCC+TGG 0.448344 7.3:+38186517 None:intergenic
ATAGAGACACTGTGTGGCCT+AGG 0.453912 7.3:+38186655 None:intergenic
GACGCAATTTCTCTCAAAAG+TGG 0.454842 7.3:-38184842 MS.gene67341:CDS
TTGTTTAGGATCCATCTCAT+TGG 0.466913 7.3:-38185905 MS.gene67341:intron
TTATGACCACATCTTCCAAC+TGG 0.467822 7.3:+38185802 None:intergenic
ATGAGGACGACTGTGGTTAA+GGG 0.472010 7.3:+38185616 None:intergenic
GAAGATTGTTATGTTTCCAT+TGG 0.475742 7.3:-38184869 MS.gene67341:CDS
GTGAGAAAGTACATATAAGA+AGG 0.477334 7.3:-38184784 MS.gene67341:CDS
ATGGGAATGTTCAAATGTCT+CGG 0.480367 7.3:-38184357 MS.gene67341:CDS
TCATTTGGTACTGAAATGTC+TGG 0.487250 7.3:-38184728 MS.gene67341:CDS
AAGCTCTTGTATCTTCCGTC+AGG 0.495493 7.3:+38185837 None:intergenic
TAGACAAGGTTATATTTGAA+AGG 0.499579 7.3:+38184402 None:intergenic
AACATCTCCATAAACATTCA+CGG 0.500990 7.3:+38186708 None:intergenic
CAATTTCTCTCAAAAGTGGA+TGG 0.507018 7.3:-38184838 MS.gene67341:CDS
GATGACGAAGAAGAATTTGA+AGG 0.513232 7.3:+38184287 None:intergenic
TGGGAATGTTCAAATGTCTC+GGG 0.517276 7.3:-38184356 MS.gene67341:CDS
ACCAAATGAAATAGCAGAGC+CGG 0.517644 7.3:+38184742 None:intergenic
TGTTACTACCTCGTGAGTCT+CGG 0.520672 7.3:-38184263 MS.gene67341:CDS
AATGGAACCATTGATGGCAA+TGG 0.521099 7.3:-38185671 MS.gene67341:CDS
TCTTTCCCTCGGCCATAAGA+AGG 0.523156 7.3:+38185864 None:intergenic
AATGTTATGTGATGCAAAAG+TGG 0.524613 7.3:+38184503 None:intergenic
GAATTTGGAGCAGTTGGAGA+TGG 0.526624 7.3:-38186628 MS.gene67341:CDS
TCAATAACATTCCAATGAGA+TGG 0.528619 7.3:+38185894 None:intergenic
CCAGAATCCCCTTATACTGC+CGG 0.534389 7.3:-38185374 MS.gene67341:CDS
GCTTTACCTTCTTATGGCCG+AGG 0.543091 7.3:-38185870 MS.gene67341:CDS
ACAATTGCTGGAAGCTTGAG+TGG 0.543463 7.3:-38184455 MS.gene67341:CDS
CTTGATAAATGGTAACCAGT+TGG 0.546984 7.3:-38185817 MS.gene67341:CDS
TGGTAACCAGTTGGAAGATG+TGG 0.548355 7.3:-38185808 MS.gene67341:CDS
CGTCAGGAACATCTTTCCCT+CGG 0.553651 7.3:+38185853 None:intergenic
ACAGGGTGGATGCTATATGC+TGG 0.557217 7.3:+38185533 None:intergenic
AGAAATTGCGTCAAAACCAA+TGG 0.560982 7.3:+38184853 None:intergenic
TTCAGAACAACCAAAGGAAG+AGG 0.562716 7.3:-38184644 MS.gene67341:CDS
TTACTAACCTGGTACTATAC+CGG 0.564112 7.3:+38185355 None:intergenic
ATGGCAATGGAATGGTTTGG+TGG 0.564149 7.3:-38185658 MS.gene67341:CDS
TGGCAATGGAATGGTTTGGT+GGG 0.576997 7.3:-38185657 MS.gene67341:CDS
TTGATGGCAATGGAATGGTT+TGG 0.583352 7.3:-38185661 MS.gene67341:CDS
ATGACGAAGAAGAATTTGAA+GGG 0.583947 7.3:+38184288 None:intergenic
TACTATACCGGCAGTATAAG+GGG 0.586797 7.3:+38185367 None:intergenic
TGAGAAAGTACATATAAGAA+GGG 0.590695 7.3:-38184783 MS.gene67341:CDS
AGAAACGGAATTTGTAGACA+AGG 0.591928 7.3:+38184388 None:intergenic
CTTTACCTTCTTATGGCCGA+GGG 0.592122 7.3:-38185869 MS.gene67341:CDS
TGAAAGGCATATGTTTGTGA+AGG 0.592606 7.3:+38184418 None:intergenic
GATATAATTTCAACGAGATG+AGG 0.595103 7.3:+38185599 None:intergenic
GCTCAGCTCTATGTGCCACC+AGG 0.597340 7.3:-38186535 MS.gene67341:CDS
TATACTGCCGGTATAGTACC+AGG 0.604603 7.3:-38185362 MS.gene67341:intron
AATTTCTCTCAAAAGTGGAT+GGG 0.608979 7.3:-38184837 MS.gene67341:CDS
AACCATTGATGGCAATGGAA+TGG 0.612706 7.3:-38185666 MS.gene67341:CDS
AAAAGTGGATGGGATCAGTA+CGG 0.626304 7.3:-38184827 MS.gene67341:CDS
TTTGGTACTGAAATGTCTGG+TGG 0.627310 7.3:-38184725 MS.gene67341:CDS
GAAAGGCATATGTTTGTGAA+GGG 0.628625 7.3:+38184419 None:intergenic
GGGTTACCAAGTTCTTGACA+AGG 0.644208 7.3:+38184308 None:intergenic
CGAGGGAAAGATGTTCCTGA+CGG 0.645144 7.3:-38185852 MS.gene67341:CDS
ATTGAGTTCAGAACAACCAA+AGG 0.651524 7.3:-38184650 MS.gene67341:CDS
AGAACAACCAAAGGAAGAGG+TGG 0.657978 7.3:-38184641 MS.gene67341:CDS
AAGTCATTTGCTGATAAGGG+TGG 0.660065 7.3:-38186559 MS.gene67341:CDS
CAACGAGATGAGGACGACTG+TGG 0.660908 7.3:+38185609 None:intergenic
TTATTTACCTGCAATAAACA+GGG 0.669198 7.3:+38185516 None:intergenic
TTTACCTGCAATAAACAGGG+TGG 0.674542 7.3:+38185519 None:intergenic
GCAGTATAAGGGGATTCTGG+AGG 0.680237 7.3:+38185377 None:intergenic
TCCAATATAGAGACACTGTG+TGG 0.732684 7.3:+38186649 None:intergenic
CCAGTAAGCCAGTTTCCTGG+TGG 0.733343 7.3:+38186520 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATATAATTGAATATACT+CGG + chr7.3:38186671-38186690 None:intergenic 15.0%
!!! CATTTTTCAAATAATTACTA+GGG - chr7.3:38186688-38186707 MS.gene67341:CDS 15.0%
!!! TCATTTTTCAAATAATTACT+AGG - chr7.3:38186687-38186706 MS.gene67341:CDS 15.0%
!!! TTTTTCATTTAATTTTTACC+AGG - chr7.3:38186037-38186056 MS.gene67341:intron 15.0%
!! ATCAATATATCAGATCAAAA+TGG + chr7.3:38184548-38184567 None:intergenic 20.0%
!! ATCTTTGAATGTATTGAAAT+TGG - chr7.3:38185394-38185413 MS.gene67341:CDS 20.0%
!! TCATACATAAAATTTGAACA+TGG + chr7.3:38184445-38184464 None:intergenic 20.0%
!! TCTTTGAATGTATTGAAATT+GGG - chr7.3:38185395-38185414 MS.gene67341:CDS 20.0%
!! TTACCATCTCAAATAATTAT+CGG + chr7.3:38186573-38186592 None:intergenic 20.0%
!! TTCTTCTTTGATACTTAATT+TGG - chr7.3:38186253-38186272 MS.gene67341:intron 20.0%
!!! AATTATATCATCTGATTTTG+TGG - chr7.3:38186150-38186169 MS.gene67341:intron 20.0%
!!! TGCTTTGTTTTTCATTTTAA+GGG - chr7.3:38184347-38184366 MS.gene67341:CDS 20.0%
!!! TTGCTTTGTTTTTCATTTTA+AGG - chr7.3:38184346-38184365 MS.gene67341:CDS 20.0%
!!! TTTTTGTGTTTTGTTCATAT+GGG - chr7.3:38184419-38184438 MS.gene67341:CDS 20.0%
! AATTGTGTATTGTTCCTATT+TGG - chr7.3:38185640-38185659 MS.gene67341:CDS 25.0%
! AATTTGGCAGACAAAATTAA+GGG - chr7.3:38186269-38186288 MS.gene67341:intron 25.0%
! ACTAACAAAATTCTTACTCA+GGG + chr7.3:38185428-38185447 None:intergenic 25.0%
! ATAACATTGAAGGATATAAC+TGG - chr7.3:38187247-38187266 MS.gene67341:intron 25.0%
! ATACCGATAATTATTTGAGA+TGG - chr7.3:38186567-38186586 MS.gene67341:CDS 25.0%
! ATTATTTACCTGCAATAAAC+AGG + chr7.3:38186223-38186242 None:intergenic 25.0%
! CTTTAATATGTTTACTAACC+TGG + chr7.3:38186394-38186413 None:intergenic 25.0%
! GCTATATTATTATAGCGTAT+CGG - chr7.3:38185696-38185715 MS.gene67341:intron 25.0%
! TAATTTGGCAGACAAAATTA+AGG - chr7.3:38186268-38186287 MS.gene67341:intron 25.0%
! TAGACAAGGTTATATTTGAA+AGG + chr7.3:38187336-38187355 None:intergenic 25.0%
! TTATTTACCTGCAATAAACA+GGG + chr7.3:38186222-38186241 None:intergenic 25.0%
!! AACATTTTCAACTCAAATAG+TGG - chr7.3:38187061-38187080 MS.gene67341:intron 25.0%
!! CCATGAGTAAAAAATCATTT+TGG + chr7.3:38185583-38185602 None:intergenic 25.0%
!! TAATTTTTACCAGGCAATAA+TGG - chr7.3:38186046-38186065 MS.gene67341:intron 25.0%
!! TGAGAAAGTACATATAAGAA+GGG - chr7.3:38186952-38186971 MS.gene67341:intron 25.0%
!!! ATGTATGAGATTTGTTCTTT+TGG - chr7.3:38184457-38184476 MS.gene67341:CDS 25.0%
!!! CCAAAATGATTTTTTACTCA+TGG - chr7.3:38185580-38185599 MS.gene67341:CDS 25.0%
!!! GTTTTTGTGTTTTGTTCATA+TGG - chr7.3:38184418-38184437 MS.gene67341:CDS 25.0%
!!! GTTTTTTTGTTCCTTTTGTT+TGG - chr7.3:38184480-38184499 MS.gene67341:CDS 25.0%
!!! TCTCTTCAAGTTTTGATTTT+TGG - chr7.3:38184370-38184389 MS.gene67341:CDS 25.0%
!!! TGTATGAGATTTGTTCTTTT+GGG - chr7.3:38184458-38184477 MS.gene67341:CDS 25.0%
!!! TTCAAGTTTTGATTTTTGGT+TGG - chr7.3:38184374-38184393 MS.gene67341:CDS 25.0%
!!! TTCTATGTCGTTTTAAATCT+GGG - chr7.3:38184925-38184944 MS.gene67341:intron 25.0%
!!! TTTCTATGTCGTTTTAAATC+TGG - chr7.3:38184924-38184943 MS.gene67341:intron 25.0%
AAATGTTAACATGCTCTATC+AGG + chr7.3:38187048-38187067 None:intergenic 30.0%
AACATCTCCATAAACATTCA+CGG + chr7.3:38185030-38185049 None:intergenic 30.0%
AATCAAATTTCAGGAGTTAC+TGG + chr7.3:38185336-38185355 None:intergenic 30.0%
AATGCTTCATAGGTTATGTT+TGG - chr7.3:38184900-38184919 MS.gene67341:intron 30.0%
AATGTTATGTGATGCAAAAG+TGG + chr7.3:38187235-38187254 None:intergenic 30.0%
AATTCACTTCAAATTGACAG+AGG + chr7.3:38184783-38184802 None:intergenic 30.0%
AATTTCTCTCAAAAGTGGAT+GGG - chr7.3:38186898-38186917 MS.gene67341:intron 30.0%
AGATACAAGAGCTTGATAAA+TGG - chr7.3:38185907-38185926 MS.gene67341:intron 30.0%
AGTGTCTCTATATTGGAATT+TGG - chr7.3:38185092-38185111 MS.gene67341:intron 30.0%
ATGACGAAGAAGAATTTGAA+GGG + chr7.3:38187450-38187469 None:intergenic 30.0%
ATTCCGTTTCTTCAAGTAAA+TGG - chr7.3:38187359-38187378 MS.gene67341:intron 30.0%
ATTGAAGCTTTACCTTCTTA+TGG - chr7.3:38185859-38185878 MS.gene67341:CDS 30.0%
ATTTCAGCTAAAGGTAATTC+TGG - chr7.3:38187172-38187191 MS.gene67341:intron 30.0%
CACTAACAAAATTCTTACTC+AGG + chr7.3:38185429-38185448 None:intergenic 30.0%
CTTAAACTAGTTCCAAATCT+GGG - chr7.3:38184317-38184336 MS.gene67341:CDS 30.0%
CTTATATGTACTTTCTCACT+TGG + chr7.3:38186950-38186969 None:intergenic 30.0%
GAAGATTGTTATGTTTCCAT+TGG - chr7.3:38186866-38186885 MS.gene67341:intron 30.0%
GACGAAACTAATCAAATTTC+AGG + chr7.3:38185345-38185364 None:intergenic 30.0%
GATAGAAGCAAGAACAAATT+TGG + chr7.3:38185978-38185997 None:intergenic 30.0%
GATATAATTTCAACGAGATG+AGG + chr7.3:38186139-38186158 None:intergenic 30.0%
GCAAAAACAATGAAAGAACT+AGG + chr7.3:38184692-38184711 None:intergenic 30.0%
GTAAGCTATTGACATTTGAA+AGG + chr7.3:38186770-38186789 None:intergenic 30.0%
TAAACCAATTAATCACCAGA+AGG + chr7.3:38184958-38184977 None:intergenic 30.0%
TATACAGCAATTTCAGCTAA+AGG - chr7.3:38187163-38187182 MS.gene67341:intron 30.0%
TCAATAACATTCCAATGAGA+TGG + chr7.3:38185844-38185863 None:intergenic 30.0%
TGAAATTTCATAAACATCCC+TGG + chr7.3:38185517-38185536 None:intergenic 30.0%
TGAGATAGAAAATTGCATTC+TGG + chr7.3:38185157-38185176 None:intergenic 30.0%
TGATTAACAACAATCACCAT+TGG + chr7.3:38184516-38184535 None:intergenic 30.0%
TGCTTTATCACACATAGAAA+TGG - chr7.3:38187132-38187151 MS.gene67341:intron 30.0%
TGGTACAAAATGTTGTCAAA+TGG - chr7.3:38185660-38185679 MS.gene67341:CDS 30.0%
TGTATGTGTTAATGCTTCAT+AGG - chr7.3:38184890-38184909 MS.gene67341:CDS 30.0%
TTCATGTGAAACCAATTTGA+GGG - chr7.3:38185787-38185806 MS.gene67341:intron 30.0%
TTCCCATTTACTTGAAGAAA+CGG + chr7.3:38187365-38187384 None:intergenic 30.0%
TTCCGTTTCTTCAAGTAAAT+GGG - chr7.3:38187360-38187379 MS.gene67341:intron 30.0%
TTTCATGTGAAACCAATTTG+AGG - chr7.3:38185786-38185805 MS.gene67341:intron 30.0%
TTTGCATCACATAACATTGA+AGG - chr7.3:38187237-38187256 MS.gene67341:intron 30.0%
TTTGGATCAAATTTGTCATC+AGG + chr7.3:38187205-38187224 None:intergenic 30.0%
! AAAATCATTTTGGACCTTGA+AGG + chr7.3:38185573-38185592 None:intergenic 30.0%
! ATGTCGTTTGAATCCTAAAT+TGG - chr7.3:38185055-38185074 MS.gene67341:intron 30.0%
! CTGAGTAAGAATTTTGTTAG+TGG - chr7.3:38185427-38185446 MS.gene67341:intron 30.0%
! GACAACATTTTGTACCAAAT+AGG + chr7.3:38185657-38185676 None:intergenic 30.0%
! GTGAGAAAGTACATATAAGA+AGG - chr7.3:38186951-38186970 MS.gene67341:intron 30.0%
! GTTTAAGGTGAAAACTCAAA+AGG + chr7.3:38184304-38184323 None:intergenic 30.0%
! TCTTGCTTCTATCAAGTTTT+TGG - chr7.3:38185985-38186004 MS.gene67341:intron 30.0%
AAAGGTTGTCTATGAAGTAC+TGG + chr7.3:38186752-38186771 None:intergenic 35.0%
AAGCAATATAGTCCCAGATT+TGG + chr7.3:38184332-38184351 None:intergenic 35.0%
ACGAGGATCAAGCTTATTAA+GGG - chr7.3:38185482-38185501 MS.gene67341:intron 35.0%
AGAAACGGAATTTGTAGACA+AGG + chr7.3:38187350-38187369 None:intergenic 35.0%
AGAAATTGCGTCAAAACCAA+TGG + chr7.3:38186885-38186904 None:intergenic 35.0%
ATGGGAATGTTCAAATGTCT+CGG - chr7.3:38187378-38187397 MS.gene67341:intron 35.0%
ATTGAGTTCAGAACAACCAA+AGG - chr7.3:38187085-38187104 MS.gene67341:intron 35.0%
CAATTTCTCTCAAAAGTGGA+TGG - chr7.3:38186897-38186916 MS.gene67341:intron 35.0%
CCTTAAACTAGTTCCAAATC+TGG - chr7.3:38184316-38184335 MS.gene67341:CDS 35.0%
CTGGTAAAAAATGAAGCAAG+AGG + chr7.3:38185317-38185336 None:intergenic 35.0%
CTGTTATCCTCATTGTGAAA+TGG - chr7.3:38186422-38186441 MS.gene67341:intron 35.0%
CTTCAGATTGAATGAGTGTT+CGG - chr7.3:38186469-38186488 MS.gene67341:CDS 35.0%
CTTGATAAATGGTAACCAGT+TGG - chr7.3:38185918-38185937 MS.gene67341:intron 35.0%
CTTTCCTTCTGGTGATTAAT+TGG - chr7.3:38184951-38184970 MS.gene67341:intron 35.0%
GAAGTGATTCTCTCATTGAT+TGG - chr7.3:38184641-38184660 MS.gene67341:CDS 35.0%
GATCAGTACGGCATTAAATA+TGG - chr7.3:38186920-38186939 MS.gene67341:intron 35.0%
GATGACGAAGAAGAATTTGA+AGG + chr7.3:38187451-38187470 None:intergenic 35.0%
GCATATACAAGCCAAACAAA+AGG + chr7.3:38184494-38184513 None:intergenic 35.0%
GGAAAGAATATCACAATTGC+TGG - chr7.3:38187268-38187287 MS.gene67341:intron 35.0%
TGAATCCTAAATTGGATCCT+AGG - chr7.3:38185063-38185082 MS.gene67341:intron 35.0%
TTACTAACCTGGTACTATAC+CGG + chr7.3:38186383-38186402 None:intergenic 35.0%
TTGAATGTAAGCACACATGT+TGG - chr7.3:38186598-38186617 MS.gene67341:CDS 35.0%
! AGCACCTTTTTCCAAAAAGA+GGG + chr7.3:38185267-38185286 None:intergenic 35.0%
! ATATTGGAATTTGGAGCAGT+TGG - chr7.3:38185101-38185120 MS.gene67341:intron 35.0%
! CCAGATTTGGAACTAGTTTA+AGG + chr7.3:38184319-38184338 None:intergenic 35.0%
! CTCAAGTCATTTGCTGATAA+GGG - chr7.3:38185173-38185192 MS.gene67341:intron 35.0%
! GAAAGGCATATGTTTGTGAA+GGG + chr7.3:38187319-38187338 None:intergenic 35.0%
! GAATTTTGTTAGTGGTTTCG+TGG - chr7.3:38185435-38185454 MS.gene67341:intron 35.0%
! TCATTTGGTACTGAAATGTC+TGG - chr7.3:38187007-38187026 MS.gene67341:intron 35.0%
! TCTCAAGTCATTTGCTGATA+AGG - chr7.3:38185172-38185191 MS.gene67341:intron 35.0%
! TGAAAGGCATATGTTTGTGA+AGG + chr7.3:38187320-38187339 None:intergenic 35.0%
! TGGTTTATGTGACCTTTTTC+AGG - chr7.3:38184971-38184990 MS.gene67341:intron 35.0%
! TTGTTTAGGATCCATCTCAT+TGG - chr7.3:38185830-38185849 MS.gene67341:CDS 35.0%
!! AGGAGTGGTTTTTCTTGTTT+AGG - chr7.3:38185816-38185835 MS.gene67341:CDS 35.0%
!! GAAAAAGGTGCTGTCATTAT+TGG - chr7.3:38185275-38185294 MS.gene67341:intron 35.0%
!!! TTTATGTGACCTTTTTCAGG+TGG - chr7.3:38184974-38184993 MS.gene67341:intron 35.0%
!!! TTTCGTCTTTTTTATGTGCG+AGG - chr7.3:38185358-38185377 MS.gene67341:intron 35.0%
AAAAGTGGATGGGATCAGTA+CGG - chr7.3:38186908-38186927 MS.gene67341:intron 40.0%
AACCAATTTGAGGGTAACTG+AGG - chr7.3:38185796-38185815 MS.gene67341:intron 40.0%
AACCATTCCATTGCCATCAA+TGG + chr7.3:38186074-38186093 None:intergenic 40.0%
ACCAAATGAAATAGCAGAGC+CGG + chr7.3:38186996-38187015 None:intergenic 40.0%
AGCAATGCCGTGAATGTTTA+TGG - chr7.3:38185020-38185039 MS.gene67341:intron 40.0%
AGTTGGACACAAGCATGTAT+TGG + chr7.3:38186498-38186517 None:intergenic 40.0%
CACGAGGATCAAGCTTATTA+AGG - chr7.3:38185481-38185500 MS.gene67341:intron 40.0%
CCAACTATGAGGCAAAAACA+CGG - chr7.3:38186512-38186531 MS.gene67341:CDS 40.0%
CCAAGTTCTTGACAAGGTTT+AGG + chr7.3:38187424-38187443 None:intergenic 40.0%
CCTAAACCTTGTCAAGAACT+TGG - chr7.3:38187421-38187440 MS.gene67341:intron 40.0%
CTTGTAAGTACGTTTCACTC+GGG - chr7.3:38184244-38184263 MS.gene67341:CDS 40.0%
GACGCAATTTCTCTCAAAAG+TGG - chr7.3:38186893-38186912 MS.gene67341:intron 40.0%
GCTTGTAAGTACGTTTCACT+CGG - chr7.3:38184243-38184262 MS.gene67341:CDS 40.0%
GTACTATACCGGCAGTATAA+GGG + chr7.3:38186372-38186391 None:intergenic 40.0%
GTCAATAGCTTACCAAACCT+TGG - chr7.3:38186777-38186796 MS.gene67341:intron 40.0%
GTTCATCTTCGTGCATTTAC+CGG - chr7.3:38186974-38186993 MS.gene67341:intron 40.0%
TACTATACCGGCAGTATAAG+GGG + chr7.3:38186371-38186390 None:intergenic 40.0%
TATGTAACCACCTCTTCCTT+TGG + chr7.3:38187104-38187123 None:intergenic 40.0%
TCAATGGTTCCATTATTGCC+TGG + chr7.3:38186058-38186077 None:intergenic 40.0%
TCCAATATAGAGACACTGTG+TGG + chr7.3:38185089-38185108 None:intergenic 40.0%
TGACTAACAAAAGAGACACG+AGG - chr7.3:38185465-38185484 MS.gene67341:intron 40.0%
TGCTGTCATTATTGGATCTC+AGG - chr7.3:38185283-38185302 MS.gene67341:intron 40.0%
TGGGAATGTTCAAATGTCTC+GGG - chr7.3:38187379-38187398 MS.gene67341:intron 40.0%
TTATGACCACATCTTCCAAC+TGG + chr7.3:38185936-38185955 None:intergenic 40.0%
TTCAGAACAACCAAAGGAAG+AGG - chr7.3:38187091-38187110 MS.gene67341:intron 40.0%
TTGGAAGATGTGGTCATAAC+AGG - chr7.3:38185937-38185956 MS.gene67341:intron 40.0%
TTTACCTGCAATAAACAGGG+TGG + chr7.3:38186219-38186238 None:intergenic 40.0%
TTTCCAAAAAGAGGGTGAGA+TGG + chr7.3:38185259-38185278 None:intergenic 40.0%
! AACCATTGATGGCAATGGAA+TGG - chr7.3:38186069-38186088 MS.gene67341:intron 40.0%
! AAGTCATTTGCTGATAAGGG+TGG - chr7.3:38185176-38185195 MS.gene67341:intron 40.0%
! AATCTGGGATACTTTCCTTC+TGG - chr7.3:38184940-38184959 MS.gene67341:intron 40.0%
! AATGGAACCATTGATGGCAA+TGG - chr7.3:38186064-38186083 MS.gene67341:intron 40.0%
! CAGCACCTTTTTCCAAAAAG+AGG + chr7.3:38185268-38185287 None:intergenic 40.0%
! GAAGTGTCAATGCTACATAG+AGG + chr7.3:38186453-38186472 None:intergenic 40.0%
! GGCAATAATGGAACCATTGA+TGG - chr7.3:38186058-38186077 MS.gene67341:intron 40.0%
! GTGTCGATGTTAGTCACTTA+TGG + chr7.3:38186644-38186663 None:intergenic 40.0%
! TTGATGGCAATGGAATGGTT+TGG - chr7.3:38186074-38186093 MS.gene67341:intron 40.0%
! TTTGGTACTGAAATGTCTGG+TGG - chr7.3:38187010-38187029 MS.gene67341:intron 40.0%
!! CTCACCCTCTTTTTGGAAAA+AGG - chr7.3:38185260-38185279 MS.gene67341:intron 40.0%
!! GTTTGGCTTGTATATGCCAA+TGG - chr7.3:38184497-38184516 MS.gene67341:CDS 40.0%
!!! TGCAAAAGTGGAAGTGCTTT+TGG + chr7.3:38187223-38187242 None:intergenic 40.0%
AAGCTCTTGTATCTTCCGTC+AGG + chr7.3:38185901-38185920 None:intergenic 45.0%
ACAATTGCTGGAAGCTTGAG+TGG - chr7.3:38187280-38187299 MS.gene67341:intron 45.0%
AGAACAACCAAAGGAAGAGG+TGG - chr7.3:38187094-38187113 MS.gene67341:intron 45.0%
AGAGCAATGCCACCTGAAAA+AGG + chr7.3:38184986-38185005 None:intergenic 45.0%
AGCTTACCAAACCTTGGTGA+GGG - chr7.3:38186783-38186802 MS.gene67341:intron 45.0%
ATGAGGACGACTGTGGTTAA+GGG + chr7.3:38186122-38186141 None:intergenic 45.0%
ATTTGAGGGTAACTGAGGAG+TGG - chr7.3:38185801-38185820 MS.gene67341:CDS 45.0%
CATGCTTGTGTCCAACTATG+AGG - chr7.3:38186501-38186520 MS.gene67341:CDS 45.0%
CTCCTCAGTTACCCTCAAAT+TGG + chr7.3:38185801-38185820 None:intergenic 45.0%
CTTTACCTTCTTATGGCCGA+GGG - chr7.3:38185866-38185885 MS.gene67341:CDS 45.0%
GCCACACAGTGTCTCTATAT+TGG - chr7.3:38185085-38185104 MS.gene67341:intron 45.0%
GGGTTACCAAGTTCTTGACA+AGG + chr7.3:38187430-38187449 None:intergenic 45.0%
GGTACTATACCGGCAGTATA+AGG + chr7.3:38186373-38186392 None:intergenic 45.0%
TAGCTTACCAAACCTTGGTG+AGG - chr7.3:38186782-38186801 MS.gene67341:intron 45.0%
TATACTGCCGGTATAGTACC+AGG - chr7.3:38186373-38186392 MS.gene67341:intron 45.0%
TGGTAACCAGTTGGAAGATG+TGG - chr7.3:38185927-38185946 MS.gene67341:intron 45.0%
TGTGGCCTAGGATCCAATTT+AGG + chr7.3:38185071-38185090 None:intergenic 45.0%
TGTTACTACCTCGTGAGTCT+CGG - chr7.3:38187472-38187491 MS.gene67341:intron 45.0%
! ATGGCAATGGAATGGTTTGG+TGG - chr7.3:38186077-38186096 MS.gene67341:intron 45.0%
! ATTAAGGGCACACGTATCCA+GGG - chr7.3:38185497-38185516 MS.gene67341:intron 45.0%
! GAATTTGGAGCAGTTGGAGA+TGG - chr7.3:38185107-38185126 MS.gene67341:intron 45.0%
! GGCATTGCCATTTCACAATG+AGG + chr7.3:38186432-38186451 None:intergenic 45.0%
! TAGCCATCTCACCCTCTTTT+TGG - chr7.3:38185253-38185272 MS.gene67341:intron 45.0%
! TATTAAGGGCACACGTATCC+AGG - chr7.3:38185496-38185515 MS.gene67341:intron 45.0%
! TGTCTCGGGATTTTCAGACT+CGG - chr7.3:38187393-38187412 MS.gene67341:intron 45.0%
!! ACCGGCTCTGCTATTTCATT+TGG - chr7.3:38186992-38187011 MS.gene67341:intron 45.0%
!! CCGTGTTTTTGCCTCATAGT+TGG + chr7.3:38186515-38186534 None:intergenic 45.0%
!! TGGCAATGGAATGGTTTGGT+GGG - chr7.3:38186078-38186097 MS.gene67341:intron 45.0%
!!! TATTTTGACCGAGACTCACG+AGG + chr7.3:38187483-38187502 None:intergenic 45.0%
AAGTGACCCTCACCAAGGTT+TGG + chr7.3:38186792-38186811 None:intergenic 50.0%
ACACATACACGTGATCAGCG+CGG + chr7.3:38184879-38184898 None:intergenic 50.0%
ACAGGGTGGATGCTATATGC+TGG + chr7.3:38186205-38186224 None:intergenic 50.0%
ATAGAGACACTGTGTGGCCT+AGG + chr7.3:38185083-38185102 None:intergenic 50.0%
CCAGAATCCCCTTATACTGC+CGG - chr7.3:38186361-38186380 MS.gene67341:intron 50.0%
CGAGGGAAAGATGTTCCTGA+CGG - chr7.3:38185883-38185902 MS.gene67341:CDS 50.0%
CGTCAGGAACATCTTTCCCT+CGG + chr7.3:38185885-38185904 None:intergenic 50.0%
CTACCAGTAAGCCAGTTTCC+TGG + chr7.3:38185221-38185240 None:intergenic 50.0%
GATGAGGACGACTGTGGTTA+AGG + chr7.3:38186123-38186142 None:intergenic 50.0%
GCAGTATAAGGGGATTCTGG+AGG + chr7.3:38186361-38186380 None:intergenic 50.0%
GCATCCACCCTGTTTATTGC+AGG - chr7.3:38186212-38186231 MS.gene67341:intron 50.0%
GCTTTACCTTCTTATGGCCG+AGG - chr7.3:38185865-38185884 MS.gene67341:CDS 50.0%
TAGCTAAGTGACCCTCACCA+AGG + chr7.3:38186797-38186816 None:intergenic 50.0%
TCTATGTGCCACCAGGAAAC+TGG - chr7.3:38185207-38185226 MS.gene67341:intron 50.0%
TCTTTCCCTCGGCCATAAGA+AGG + chr7.3:38185874-38185893 None:intergenic 50.0%
TGAGACGCTTGTCACCTTCA+AGG - chr7.3:38185556-38185575 MS.gene67341:CDS 50.0%
!! ACGATACTGACTCTGACTCG+TGG - chr7.3:38186544-38186563 MS.gene67341:CDS 50.0%
!! ATGGAATGGTTTGGTGGGAC+TGG - chr7.3:38186083-38186102 MS.gene67341:intron 50.0%
CAACGAGATGAGGACGACTG+TGG + chr7.3:38186129-38186148 None:intergenic 55.0%
CCAGTAAGCCAGTTTCCTGG+TGG + chr7.3:38185218-38185237 None:intergenic 55.0%
CCGGCAGTATAAGGGGATTC+TGG + chr7.3:38186364-38186383 None:intergenic 55.0%
! CCACCAGGAAACTGGCTTAC+TGG - chr7.3:38185215-38185234 MS.gene67341:intron 55.0%
GCTCAGCTCTATGTGCCACC+AGG - chr7.3:38185200-38185219 MS.gene67341:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 38184241 38187516 38184241 ID=MS.gene67341
chr7.3 mRNA 38184241 38187516 38184241 ID=MS.gene67341.t1;Parent=MS.gene67341
chr7.3 exon 38187511 38187516 38187511 ID=MS.gene67341.t1.exon1;Parent=MS.gene67341.t1
chr7.3 CDS 38187511 38187516 38187511 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
chr7.3 exon 38186453 38186764 38186453 ID=MS.gene67341.t1.exon2;Parent=MS.gene67341.t1
chr7.3 CDS 38186453 38186764 38186453 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
chr7.3 exon 38185799 38185919 38185799 ID=MS.gene67341.t1.exon3;Parent=MS.gene67341.t1
chr7.3 CDS 38185799 38185919 38185799 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
chr7.3 exon 38185524 38185698 38185524 ID=MS.gene67341.t1.exon4;Parent=MS.gene67341.t1
chr7.3 CDS 38185524 38185698 38185524 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
chr7.3 exon 38185363 38185433 38185363 ID=MS.gene67341.t1.exon5;Parent=MS.gene67341.t1
chr7.3 CDS 38185363 38185433 38185363 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
chr7.3 exon 38184241 38184914 38184241 ID=MS.gene67341.t1.exon6;Parent=MS.gene67341.t1
chr7.3 CDS 38184241 38184914 38184241 ID=cds.MS.gene67341.t1;Parent=MS.gene67341.t1
Gene Sequence

>MS.gene67341

ATGCTTGTAAGTACGTTTCACTCGGGTTTCATTTTATTTTTTTTGTTAATGCTTTCTTTGCCTTTTGAGTTTTCACCTTAAACTAGTTCCAAATCTGGGACTATATTGCTTTGTTTTTCATTTTAAGGGTCTCTTCAAGTTTTGATTTTTGGTTGGAATTTATATGTTTAAGTCAAAGTTTTTGTGTTTTGTTCATATGGGCCATGTTCAAATTTTATGTATGAGATTTGTTCTTTTGGGTTTTTTTGTTCCTTTTGTTTGGCTTGTATATGCCAATGGTGATTGTTGTTAATCAAATTTTAATCCATTTTGATCTGATATATTGATCTGAATAATTTGCATTTTAGTTTAATTTCATCTGAGAATTCACTTTTGAAGTTTTTTCTCATAAGCTTTTGTTGAAGTGATTCTCTCATTGATTGGTGTGTGAAAATGAGCATTTTTGTTGCCTAGTTCTTTCATTGTTTTTGCTATCAATTTTCTTGATTCTTCTATTCATTTGTTGTGTTTGTTCATTCTTGTTTCAGATGTGTTCTTAACCTCTGTCAATTTGAAGTGAATTGTTTTCTTCATGAACAAATTAATTATTTGCTTGATTAATTACATTCAATTAATTTGTTTGATCAAATTATTATCCGCGCTGATCACGTGTATGTGTTAATGCTTCATAGGTTATGTTTGGCTTTCTATGTCGTTTTAAATCTGGGATACTTTCCTTCTGGTGATTAATTGGTTTATGTGACCTTTTTCAGGTGGCATTGCTCTTGCTTCTTGCATTGAGCAATGCCGTGAATGTTTATGGAGATGTTGAGATATGTCGTTTGAATCCTAAATTGGATCCTAGGCCACACAGTGTCTCTATATTGGAATTTGGAGCAGTTGGAGATGGTAAAACACTGAATACAATTGCATTCCAGAATGCAATTTTCTATCTCAAGTCATTTGCTGATAAGGGTGGTGCTCAGCTCTATGTGCCACCAGGAAACTGGCTTACTGGTAGTTTCAATCTTACTAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGTACTTTTACCTCTTGCTTCATTTTTTACCAGTAACTCCTGAAATTTGATTAGTTTCGTCTTTTTTATGTGCGAGGCATTGTCACTATAATCTTTGAATGTATTGAAATTGGGCAAGCATCCCTGAGTAAGAATTTTGTTAGTGGTTTCGTGGACTAAGCTGACTAACAAAAGAGACACGAGGATCAAGCTTATTAAGGGCACACGTATCCAGGGATGTTTATGAAATTTCAATACATTCAAGAATTATAGTGAGACGCTTGTCACCTTCAAGGTCCAAAATGATTTTTTACTCATGGTGAATGTGAAAAATTATAGCGTAGCAGAATGTGAATGAATTGTGTATTGTTCCTATTTGGTACAAAATGTTGTCAAATGGCTGCTATAACAGTGCTATATTATTATAGCGTATCGGAAATTAAACAAACTACTATTTTCTGTGATTTGCTATTGATAACACTGATTTCTTGTGTATAAAGATATTTCATGTGAAACCAATTTGAGGGTAACTGAGGAGTGGTTTTTCTTGTTTAGGATCCATCTCATTGGAATGTTATTGAAGCTTTACCTTCTTATGGCCGAGGGAAAGATGTTCCTGACGGAAGATACAAGAGCTTGATAAATGGTAACCAGTTGGAAGATGTGGTCATAACAGGTTTGTCAATTCTGCTCCAAATTTGTTCTTGCTTCTATCAAGTTTTTGGCTTTTCTCTTTCTATATTGAATTTTCATATTTTTCATTTAATTTTTACCAGGCAATAATGGAACCATTGATGGCAATGGAATGGTTTGGTGGGACTGGTTTAAGTCTCATTCCCTTAACCACAGTCGTCCTCATCTCGTTGAAATTATATCATCTGATTTTGTGGTAGTTTCAAATCTTACATTCTTGAATGCTCCAGCATATAGCATCCACCCTGTTTATTGCAGGTAAATAATTTTCTGCTTCTTCTTCTTTGATACTTAATTTGGCAGACAAAATTAAGGGATGTTGATAAAGTTACATTTAATTTGATGCAGCAATGTACATATTCAAAACATTTCAATCTCTACTCCTCCAGAATCCCCTTATACTGCCGGTATAGTACCAGGTTAGTAAACATATTAAAGACTCAATTCTGTTATCCTCATTGTGAAATGGCAATGCCTCTATGTAGCATTGACACTTCAGATTGAATGAGTGTTCGGTGTCCAATACATGCTTGTGTCCAACTATGAGGCAAAAACACGGACATCAGACACGATACTGACTCTGACTCGTGGATACCGATAATTATTTGAGATGGTAAAATATTTGAATGTAAGCACACATGTTGGTGTTTTGTCGTGTCAGTGCTCCATAAGTGACTAACATCGACACGACACCGAGTATATTCAATTATATCATTTTTCAAATAATTACTAGGGTTGACGTGTTAGTGTCGTGTCTAATGTCACTGTCTGTACCAGTACTTCATAGACAACCTTTCAAATGTCAATAGCTTACCAAACCTTGGTGAGGGTCACTTAGCTAAACATTTGTGCTCTTCATGTTTTCAGATTCTTCTGATAATGTTTGTATAGAAGATTGTTATGTTTCCATTGGTTTTGACGCAATTTCTCTCAAAAGTGGATGGGATCAGTACGGCATTAAATATGGAAGACCAAGTGAGAAAGTACATATAAGAAGGGTTCATCTTCGTGCATTTACCGGCTCTGCTATTTCATTTGGTACTGAAATGTCTGGTGGAATTTCAAAAGTCCTGATAGAGCATGTTAACATTTTCAACTCAAATAGTGGCATTGAGTTCAGAACAACCAAAGGAAGAGGTGGTTACATAAAAGAAATTGCTTTATCACACATAGAAATGGAAAATGTTTATACAGCAATTTCAGCTAAAGGTAATTCTGGTTCTCATCCTGATGACAAATTTGATCCAAAAGCACTTCCACTTTTGCATCACATAACATTGAAGGATATAACTGGAAAGAATATCACAATTGCTGGAAGCTTGAGTGGAATAGAAGAATCACCCTTCACAAACATATGCCTTTCAAATATAACCTTGTCTACAAATTCCGTTTCTTCAAGTAAATGGGAATGTTCAAATGTCTCGGGATTTTCAGACTCGGTGTTGCCTAAACCTTGTCAAGAACTTGGTAACCCTTCAAATTCTTCTTCGTCATCGTGTTACTACCTCGTGAGTCTCGGTCAAAATACTGCAGCGATTTAA
Protein sequence

>MS.gene67341.t1

MLVALLLLLALSNAVNVYGDVEICRLNPKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFNLTSHLTLFLEKGAVIIGSQDPSHWNVIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDWFKSHSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAGIVPDSSDNVCIEDCYVSIGFDAISLKSGWDQYGIKYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLIEHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVYTAISAKGNSGSHPDDKFDPKALPLLHHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSSKWECSNVSGFSDSVLPKPCQELGNPSNSSSSSCYYLVSLGQNTAAI