AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67385.t1 MTR_4g062170 96.721 427 13 1 1 426 46 472 0.0 850
MS.gene67385.t1 MTR_4g062270 89.437 426 38 1 1 426 46 464 0.0 794
MS.gene67385.t1 MTR_4g062190 85.748 428 59 1 1 426 46 473 0.0 743
MS.gene67385.t1 MTR_2g096210 72.235 425 112 4 2 421 47 470 0.0 642
MS.gene67385.t1 MTR_1g115560 56.057 421 175 2 2 412 48 468 1.33e-179 510
MS.gene67385.t1 MTR_7g118170 43.797 395 200 6 9 395 145 525 4.45e-112 339
MS.gene67385.t1 MTR_5g056510 41.867 375 204 4 23 395 125 487 4.94e-105 320
MS.gene67385.t1 MTR_1g076430 43.467 375 197 4 24 395 141 503 3.23e-103 316
MS.gene67385.t1 MTR_4g070270 40.816 392 215 5 9 395 120 499 3.80e-103 315
MS.gene67385.t1 MTR_3g105550 39.286 392 229 3 9 395 146 533 4.07e-103 317
MS.gene67385.t1 MTR_1g110930 40.800 375 208 4 23 395 125 487 5.87e-103 315
MS.gene67385.t1 MTR_2g054940 42.133 375 202 4 24 395 140 502 2.20e-101 311
MS.gene67385.t1 MTR_7g118160 45.820 323 154 2 78 395 110 416 4.72e-101 308
MS.gene67385.t1 MTR_1g041085 42.078 385 208 4 14 395 137 509 5.64e-101 310
MS.gene67385.t1 MTR_4g054415 38.693 398 223 7 7 395 37 422 1.80e-95 293
MS.gene67385.t1 MTR_4g054630 38.693 398 223 7 7 395 78 463 3.63e-95 294
MS.gene67385.t1 MTR_6g074880 40.160 376 209 5 24 395 102 465 4.53e-94 291
MS.gene67385.t1 MTR_4g113280 39.894 376 200 5 23 395 128 480 5.05e-94 291
MS.gene67385.t1 MTR_2g007020 40.533 375 208 4 24 395 86 448 4.05e-93 288
MS.gene67385.t1 MTR_7g081695 41.333 375 193 5 24 395 140 490 1.07e-92 296
MS.gene67385.t1 MTR_6g032965 38.213 403 231 6 10 406 2 392 8.99e-92 283
MS.gene67385.t1 MTR_2g436480 38.503 374 218 4 24 395 85 448 6.25e-90 280
MS.gene67385.t1 MTR_2g013740 38.503 374 213 3 9 381 135 492 4.86e-87 274
MS.gene67385.t1 MTR_1g102290 37.500 376 219 7 24 395 120 483 3.03e-79 253
MS.gene67385.t1 MTR_3g072980 35.467 375 226 5 24 395 121 482 1.71e-75 243
MS.gene67385.t1 MTR_3g072940 35.467 375 226 5 24 395 121 482 1.82e-75 243
MS.gene67385.t1 MTR_6g051440 35.467 375 226 5 24 395 120 481 3.33e-70 229
MS.gene67385.t1 MTR_4g054260 37.597 258 129 5 142 395 93 322 6.71e-51 174
MS.gene67385.t1 MTR_4g053905 40.764 157 79 3 242 395 11 156 3.28e-36 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67385.t1 AT2G28630 72.494 429 111 3 1 423 46 473 0.0 644
MS.gene67385.t1 AT2G28630 72.494 429 111 3 1 423 46 473 0.0 644
MS.gene67385.t1 AT1G07720 71.759 432 111 4 1 423 89 518 0.0 635
MS.gene67385.t1 AT1G07720 71.759 432 111 4 1 423 46 475 0.0 633
MS.gene67385.t1 AT5G04530 55.314 414 175 3 2 412 49 455 1.02e-176 502
MS.gene67385.t1 AT1G01120 42.597 385 199 5 20 397 156 525 7.51e-110 333
MS.gene67385.t1 AT2G16280 43.501 377 199 4 23 397 145 509 3.17e-106 323
MS.gene67385.t1 AT1G19440 42.063 378 199 5 23 395 149 511 4.44e-105 321
MS.gene67385.t1 AT1G25450 42.667 375 201 4 23 395 121 483 6.02e-105 320
MS.gene67385.t1 AT2G46720 42.063 378 202 4 23 395 97 462 1.63e-104 318
MS.gene67385.t1 AT4G34510 42.216 379 202 4 23 397 119 484 2.67e-103 315
MS.gene67385.t1 AT1G68530 41.067 375 207 4 23 395 126 488 1.76e-102 313
MS.gene67385.t1 AT1G04220 40.452 398 214 6 10 395 126 512 8.72e-102 313
MS.gene67385.t1 AT2G26640 41.344 387 212 4 12 395 126 500 3.61e-101 310
MS.gene67385.t1 AT5G43760 41.206 398 210 7 10 395 132 517 1.83e-100 309
MS.gene67385.t1 AT2G15090 40.476 378 203 6 24 395 115 476 1.97e-98 303
MS.gene67385.t1 AT3G10280 40.741 378 200 5 23 395 97 455 5.89e-98 301
MS.gene67385.t1 AT4G34250 41.379 377 201 6 24 395 123 484 6.46e-98 301
MS.gene67385.t1 AT4G34520 40.816 392 210 6 14 397 112 489 1.67e-97 301
MS.gene67385.t1 AT2G26250 37.037 405 236 4 9 395 144 547 2.01e-95 297
MS.gene67385.t1 AT5G49070 39.005 382 219 5 17 395 82 452 3.55e-91 283
MS.gene67385.t1 AT1G71160 37.736 371 216 4 27 395 88 445 5.59e-90 280
MS.gene67385.t1 AT3G52160 34.648 355 189 3 27 381 16 327 1.10e-73 234
MS.gene67385.t1 AT3G52160 34.648 355 189 3 27 381 129 440 2.38e-72 234
MS.gene67385.t1 AT1G68530 38.326 227 139 1 23 249 126 351 2.09e-53 182
MS.gene67385.t1 AT5G49070 31.897 232 157 1 17 248 82 312 1.41e-34 131

Find 76 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTCTTTGTTGACAATTTA+AGG 0.088298 4.1:+37628412 MS.gene67385:CDS
TTCCCTTGTTGGCAAAATTT+TGG 0.124989 4.1:-37628445 None:intergenic
AATCAAAAGAACCAAGAATT+TGG 0.151534 4.1:+37627732 MS.gene67385:CDS
AAGAAATAAGTTAGCACTTT+TGG 0.201713 4.1:+37628122 MS.gene67385:CDS
CGGCCTTCAAAGATGTTTCT+TGG 0.209523 4.1:-37627823 None:intergenic
TCATTGCCAGTGTACCAATT+TGG 0.263580 4.1:-37628165 None:intergenic
CTCATCTAGACCCAAATTCT+TGG 0.296994 4.1:-37627743 None:intergenic
TAATTATCCACCAAAGTCTT+TGG 0.310010 4.1:+37628878 MS.gene67385:CDS
AACCTAAGCAATTCCCTTGT+TGG 0.324150 4.1:-37628456 None:intergenic
GACGACAAGAACGTCGATTT+CGG 0.326349 4.1:-37627944 None:intergenic
CGATGTAGTGTCATTCTTGC+AGG 0.330569 4.1:-37628672 None:intergenic
GTCTTTGGTCAATTCTTTCA+TGG 0.348215 4.1:+37628893 MS.gene67385:CDS
GTAAGTTTGCTCGCCGATTC+CGG 0.351600 4.1:-37627797 None:intergenic
TCACCATTAAATTTCAAAAC+TGG 0.358128 4.1:+37628561 MS.gene67385:CDS
CAGAGTCTCTTAGTCCAAAT+TGG 0.358921 4.1:+37628151 MS.gene67385:CDS
ATCAAAAGAACCAAGAATTT+GGG 0.367372 4.1:+37627733 MS.gene67385:CDS
AGATCCCGTCGTTCAGTGTT+GGG 0.368292 4.1:-37627855 None:intergenic
AGTCTTTGTTGACAATTTAA+GGG 0.369626 4.1:+37628413 MS.gene67385:CDS
AAAGCAGTGATTGATGGAAT+TGG 0.387221 4.1:+37628615 MS.gene67385:CDS
GGTAGCTTGTGGTATGTGTT+AGG 0.387806 4.1:+37628714 MS.gene67385:CDS
AGAATGACACTACATCGTTT+TGG 0.403512 4.1:+37628678 MS.gene67385:CDS
TACCTTCACTTGAGAAAGTC+AGG 0.413091 4.1:-37628966 None:intergenic
GCCATTGTAAGTTCCGGAAT+CGG 0.413937 4.1:+37627784 MS.gene67385:CDS
GGAGGTAAAGCAGTGATTGA+TGG 0.422682 4.1:+37628609 MS.gene67385:CDS
CGGAACTTACAATGGCTTTG+AGG 0.426061 4.1:-37627777 None:intergenic
CTCAAAGCCATTGTAAGTTC+CGG 0.431981 4.1:+37627778 MS.gene67385:CDS
TGCCAACAAGGGAATTGCTT+AGG 0.432387 4.1:+37628454 MS.gene67385:CDS
TTACAATTGTTGCATTCAAA+AGG 0.434595 4.1:+37628329 MS.gene67385:CDS
TCAGGAAGATCATAGTTGTT+AGG 0.436130 4.1:-37628948 None:intergenic
AGTTCTTCTAAGTCTTCAAC+TGG 0.436663 4.1:+37628519 MS.gene67385:CDS
GCACCAAGAAACATCTTTGA+AGG 0.448515 4.1:+37627820 MS.gene67385:CDS
TGTTGGAGATGCAAATGTTT+GGG 0.448918 4.1:+37628842 MS.gene67385:CDS
ACTTGCACTACAACCCATTC+CGG 0.459457 4.1:-37628058 None:intergenic
TCAAATGCAATAGTTGTTTG+TGG 0.465403 4.1:+37628805 MS.gene67385:CDS
CAAATGCAATAGTTGTTTGT+GGG 0.467994 4.1:+37628806 MS.gene67385:CDS
CTTTCATGGAGAAGTATAGT+TGG 0.468430 4.1:+37628907 MS.gene67385:CDS
GAAGATGAGCAGGGTAGGCT+TGG 0.474253 4.1:+37628351 MS.gene67385:CDS
GCCGGAACGGAAAAGACAAT+TGG 0.476811 4.1:-37628205 None:intergenic
AAAGAATTGACCAAAGACTT+TGG 0.478011 4.1:-37628888 None:intergenic
TTTCATGGAGAAGTATAGTT+GGG 0.478641 4.1:+37628908 MS.gene67385:CDS
AAGAACGTCGATTTCGGAAG+GGG 0.480454 4.1:-37627938 None:intergenic
ATGTTGGAGATGCAAATGTT+TGG 0.481221 4.1:+37628841 MS.gene67385:CDS
CATTCAAAAGGAAGATGAGC+AGG 0.483405 4.1:+37628341 MS.gene67385:CDS
GTGTACAATCTCACCGGAAT+GGG 0.485997 4.1:+37628045 MS.gene67385:CDS
TGGGAAGTGATGAAAGATGT+TGG 0.492482 4.1:+37628825 MS.gene67385:CDS
GTGGTATGTGTTAGGTTACA+TGG 0.503646 4.1:+37628722 MS.gene67385:CDS
GAGATCCCGTCGTTCAGTGT+TGG 0.510257 4.1:-37627856 None:intergenic
CGAAGATAAAGAAGGAAGAA+TGG 0.515205 4.1:-37627983 None:intergenic
AGTGTACAATCTCACCGGAA+TGG 0.523311 4.1:+37628044 MS.gene67385:CDS
TCAGTGTTGGGGATGATTCG+CGG 0.524299 4.1:-37627843 None:intergenic
CATCCCCAACACTGAACGAC+GGG 0.534315 4.1:+37627851 MS.gene67385:CDS
CAAAAGAATCGCACAACCGC+CGG 0.537549 4.1:-37628223 None:intergenic
GCCGATTCCGGAACTTACAA+TGG 0.540306 4.1:-37627785 None:intergenic
GAATCGCACAACCGCCGGAA+CGG 0.546735 4.1:-37628218 None:intergenic
ACACTTCTGCTGGTAGCTTG+TGG 0.556818 4.1:+37628703 MS.gene67385:CDS
TTCCTGACTTTCTCAAGTGA+AGG 0.560019 4.1:+37628964 MS.gene67385:CDS
GAACGACGGGATCTCTGAGA+TGG 0.560538 4.1:+37627864 MS.gene67385:CDS
GATCCCGTCGTTCAGTGTTG+GGG 0.565462 4.1:-37627854 None:intergenic
CTTAGTCCAAATTGGTACAC+TGG 0.575705 4.1:+37628159 MS.gene67385:CDS
AAAAGGAAGATGAGCAGGGT+AGG 0.584974 4.1:+37628346 MS.gene67385:CDS
ATGATTCGCGAAGATAAAGA+AGG 0.585345 4.1:-37627991 None:intergenic
TCTTCTAAGTCTTCAACTGG+TGG 0.587214 4.1:+37628522 MS.gene67385:CDS
ACAAGAACGTCGATTTCGGA+AGG 0.590305 4.1:-37627940 None:intergenic
CCAACACAAGATAGAATGCT+AGG 0.591818 4.1:+37627688 None:intergenic
GGGAAATCGCTGATCTAGCA+AGG 0.595724 4.1:-37627918 None:intergenic
TAGTTGGGTCAATGAAGTTG+AGG 0.600109 4.1:+37628923 MS.gene67385:CDS
GAATTGACCAAAGACTTTGG+TGG 0.608452 4.1:-37628885 None:intergenic
CTGCTTTACCTCCTGTGTGG+AGG 0.626786 4.1:-37628599 None:intergenic
AACGGAAAAGACAATTGGCT+AGG 0.628055 4.1:-37628200 None:intergenic
CAAGAACGTCGATTTCGGAA+GGG 0.628510 4.1:-37627939 None:intergenic
AAGAGTCTTCTCTTGCGCCG+TGG 0.637122 4.1:-37628308 None:intergenic
TCACTGCTTTACCTCCTGTG+TGG 0.651603 4.1:-37628602 None:intergenic
GTAAAAGTGTACAATCTCAC+CGG 0.655315 4.1:+37628039 MS.gene67385:CDS
TCATCCCCAACACTGAACGA+CGG 0.690414 4.1:+37627850 MS.gene67385:CDS
ATTCAAAAGGAAGATGAGCA+GGG 0.694442 4.1:+37628342 MS.gene67385:CDS
TGTTTAGTACGAACGCACCA+CGG 0.710347 4.1:+37628291 MS.gene67385:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGTCTTTGTTGACAATTTA+AGG + chr4.1:37628412-37628431 MS.gene67385:CDS 25.0%
! AATCAAAAGAACCAAGAATT+TGG + chr4.1:37627732-37627751 MS.gene67385:CDS 25.0%
! AGTCTTTGTTGACAATTTAA+GGG + chr4.1:37628413-37628432 MS.gene67385:CDS 25.0%
! ATCAAAAGAACCAAGAATTT+GGG + chr4.1:37627733-37627752 MS.gene67385:CDS 25.0%
! TCACCATTAAATTTCAAAAC+TGG + chr4.1:37628561-37628580 MS.gene67385:CDS 25.0%
! TTACAATTGTTGCATTCAAA+AGG + chr4.1:37628329-37628348 MS.gene67385:CDS 25.0%
!! AAGAAATAAGTTAGCACTTT+TGG + chr4.1:37628122-37628141 MS.gene67385:CDS 25.0%
!! AGGGTTTTTATGATAAGTTT+TGG + chr4.1:37628774-37628793 MS.gene67385:CDS 25.0%
!!! ACACCAGTTTTGAAATTTAA+TGG - chr4.1:37628567-37628586 None:intergenic 25.0%
AAAGAATTGACCAAAGACTT+TGG - chr4.1:37628891-37628910 None:intergenic 30.0%
CAAATGCAATAGTTGTTTGT+GGG + chr4.1:37628806-37628825 MS.gene67385:CDS 30.0%
TAATTATCCACCAAAGTCTT+TGG + chr4.1:37628878-37628897 MS.gene67385:CDS 30.0%
TCAAATGCAATAGTTGTTTG+TGG + chr4.1:37628805-37628824 MS.gene67385:CDS 30.0%
! TTTCATGGAGAAGTATAGTT+GGG + chr4.1:37628908-37628927 MS.gene67385:CDS 30.0%
!! TTTATGATAAGTTTTGGTGC+TGG + chr4.1:37628780-37628799 MS.gene67385:CDS 30.0%
!!! CAGTATGCTTCTGTTTTTTA+AGG - chr4.1:37628262-37628281 None:intergenic 30.0%
AAAGCAGTGATTGATGGAAT+TGG + chr4.1:37628615-37628634 MS.gene67385:CDS 35.0%
AGTTCTTCTAAGTCTTCAAC+TGG + chr4.1:37628519-37628538 MS.gene67385:CDS 35.0%
ATGATTCGCGAAGATAAAGA+AGG - chr4.1:37627994-37628013 None:intergenic 35.0%
ATGTTGGAGATGCAAATGTT+TGG + chr4.1:37628841-37628860 MS.gene67385:CDS 35.0%
ATTCAAAAGGAAGATGAGCA+GGG + chr4.1:37628342-37628361 MS.gene67385:CDS 35.0%
CGAAGATAAAGAAGGAAGAA+TGG - chr4.1:37627986-37628005 None:intergenic 35.0%
GCAAAAAAGAGGCTCAAAAA+AGG + chr4.1:37628747-37628766 MS.gene67385:CDS 35.0%
GTCTTTGGTCAATTCTTTCA+TGG + chr4.1:37628893-37628912 MS.gene67385:CDS 35.0%
GTTACATGGAAGCAAAAAAG+AGG + chr4.1:37628736-37628755 MS.gene67385:CDS 35.0%
TCAGGAAGATCATAGTTGTT+AGG - chr4.1:37628951-37628970 None:intergenic 35.0%
TGTTGGAGATGCAAATGTTT+GGG + chr4.1:37628842-37628861 MS.gene67385:CDS 35.0%
! ACCCAAAATTTTGCCAACAA+GGG + chr4.1:37628443-37628462 MS.gene67385:CDS 35.0%
! AGAATGACACTACATCGTTT+TGG + chr4.1:37628678-37628697 MS.gene67385:CDS 35.0%
! CTTTCATGGAGAAGTATAGT+TGG + chr4.1:37628907-37628926 MS.gene67385:CDS 35.0%
! GTAAAAGTGTACAATCTCAC+CGG + chr4.1:37628039-37628058 MS.gene67385:CDS 35.0%
! TCCCTTGTTGGCAAAATTTT+GGG - chr4.1:37628447-37628466 None:intergenic 35.0%
! TTCCCTTGTTGGCAAAATTT+TGG - chr4.1:37628448-37628467 None:intergenic 35.0%
!! GTAGGCTTGGTTTTCATTTA+GGG + chr4.1:37628364-37628383 MS.gene67385:CDS 35.0%
!!! AAGACTTTTGTTGCTGCTTT+TGG - chr4.1:37628399-37628418 None:intergenic 35.0%
!!! AGACTTTTGTTGCTGCTTTT+GGG - chr4.1:37628398-37628417 None:intergenic 35.0%
AACCTAAGCAATTCCCTTGT+TGG - chr4.1:37628459-37628478 None:intergenic 40.0%
AACGGAAAAGACAATTGGCT+AGG - chr4.1:37628203-37628222 None:intergenic 40.0%
AGAGGCTCAAAAAAGGTGAT+AGG + chr4.1:37628754-37628773 MS.gene67385:CDS 40.0%
CAGAGTCTCTTAGTCCAAAT+TGG + chr4.1:37628151-37628170 MS.gene67385:CDS 40.0%
CATTCAAAAGGAAGATGAGC+AGG + chr4.1:37628341-37628360 MS.gene67385:CDS 40.0%
CTCAAAGCCATTGTAAGTTC+CGG + chr4.1:37627778-37627797 MS.gene67385:CDS 40.0%
CTCATCTAGACCCAAATTCT+TGG - chr4.1:37627746-37627765 None:intergenic 40.0%
CTTAGTCCAAATTGGTACAC+TGG + chr4.1:37628159-37628178 MS.gene67385:CDS 40.0%
GAATTGACCAAAGACTTTGG+TGG - chr4.1:37628888-37628907 None:intergenic 40.0%
GAGGCTCAAAAAAGGTGATA+GGG + chr4.1:37628755-37628774 MS.gene67385:CDS 40.0%
GCACCAAGAAACATCTTTGA+AGG + chr4.1:37627820-37627839 MS.gene67385:CDS 40.0%
GTGGTATGTGTTAGGTTACA+TGG + chr4.1:37628722-37628741 MS.gene67385:CDS 40.0%
TAGTTGGGTCAATGAAGTTG+AGG + chr4.1:37628923-37628942 MS.gene67385:CDS 40.0%
TCATTGCCAGTGTACCAATT+TGG - chr4.1:37628168-37628187 None:intergenic 40.0%
TCTTCTAAGTCTTCAACTGG+TGG + chr4.1:37628522-37628541 MS.gene67385:CDS 40.0%
TGGGAAGTGATGAAAGATGT+TGG + chr4.1:37628825-37628844 MS.gene67385:CDS 40.0%
! CACCCAAAATTTTGCCAACA+AGG + chr4.1:37628442-37628461 MS.gene67385:CDS 40.0%
! CGTCGTGTCTCATTTTGTAA+CGG - chr4.1:37628020-37628039 None:intergenic 40.0%
!! GGTAGGCTTGGTTTTCATTT+AGG + chr4.1:37628363-37628382 MS.gene67385:CDS 40.0%
AAAAGGAAGATGAGCAGGGT+AGG + chr4.1:37628346-37628365 MS.gene67385:CDS 45.0%
ACTTGCACTACAACCCATTC+CGG - chr4.1:37628061-37628080 None:intergenic 45.0%
AGTGTACAATCTCACCGGAA+TGG + chr4.1:37628044-37628063 MS.gene67385:CDS 45.0%
CGGCCTTCAAAGATGTTTCT+TGG - chr4.1:37627826-37627845 None:intergenic 45.0%
GCCATTGTAAGTTCCGGAAT+CGG + chr4.1:37627784-37627803 MS.gene67385:CDS 45.0%
GGAGGTAAAGCAGTGATTGA+TGG + chr4.1:37628609-37628628 MS.gene67385:CDS 45.0%
GTGTACAATCTCACCGGAAT+GGG + chr4.1:37628045-37628064 MS.gene67385:CDS 45.0%
TGCCAACAAGGGAATTGCTT+AGG + chr4.1:37628454-37628473 MS.gene67385:CDS 45.0%
TGTTTAGTACGAACGCACCA+CGG + chr4.1:37628291-37628310 MS.gene67385:CDS 45.0%
! AATTGTCTTTTCCGTTCCGG+CGG + chr4.1:37628207-37628226 MS.gene67385:CDS 45.0%
! ATGCTAGGCACAGAGTTTTG+TGG + chr4.1:37627703-37627722 MS.gene67385:CDS 45.0%
! CGATGTAGTGTCATTCTTGC+AGG - chr4.1:37628675-37628694 None:intergenic 45.0%
! CGGAACTTACAATGGCTTTG+AGG - chr4.1:37627780-37627799 None:intergenic 45.0%
! GCCAATTGTCTTTTCCGTTC+CGG + chr4.1:37628204-37628223 MS.gene67385:CDS 45.0%
! GGTAGCTTGTGGTATGTGTT+AGG + chr4.1:37628714-37628733 MS.gene67385:CDS 45.0%
!! AAGAACGTCGATTTCGGAAG+GGG - chr4.1:37627941-37627960 None:intergenic 45.0%
!! ACAAGAACGTCGATTTCGGA+AGG - chr4.1:37627943-37627962 None:intergenic 45.0%
!! CAAGAACGTCGATTTCGGAA+GGG - chr4.1:37627942-37627961 None:intergenic 45.0%
!! CGTTTTGGTAACACTTCTGC+TGG + chr4.1:37628693-37628712 MS.gene67385:CDS 45.0%
!! GACGACAAGAACGTCGATTT+CGG - chr4.1:37627947-37627966 None:intergenic 45.0%
!! GATCATTTTTGCCTCCACAC+AGG + chr4.1:37628588-37628607 MS.gene67385:CDS 45.0%
ACACTTCTGCTGGTAGCTTG+TGG + chr4.1:37628703-37628722 MS.gene67385:CDS 50.0%
AGATCCCGTCGTTCAGTGTT+GGG - chr4.1:37627858-37627877 None:intergenic 50.0%
CAAAAGAATCGCACAACCGC+CGG - chr4.1:37628226-37628245 None:intergenic 50.0%
GCCGGAACGGAAAAGACAAT+TGG - chr4.1:37628208-37628227 None:intergenic 50.0%
GGGAAATCGCTGATCTAGCA+AGG - chr4.1:37627921-37627940 None:intergenic 50.0%
TCACTGCTTTACCTCCTGTG+TGG - chr4.1:37628605-37628624 None:intergenic 50.0%
TCATCCCCAACACTGAACGA+CGG + chr4.1:37627850-37627869 MS.gene67385:CDS 50.0%
! CATTTTTGCCTCCACACAGG+AGG + chr4.1:37628591-37628610 MS.gene67385:CDS 50.0%
! GCCGATTCCGGAACTTACAA+TGG - chr4.1:37627788-37627807 None:intergenic 50.0%
! TCAGTGTTGGGGATGATTCG+CGG - chr4.1:37627846-37627865 None:intergenic 50.0%
!! GTAAGTTTGCTCGCCGATTC+CGG - chr4.1:37627800-37627819 None:intergenic 50.0%
AAGAGTCTTCTCTTGCGCCG+TGG - chr4.1:37628311-37628330 None:intergenic 55.0%
CATCCCCAACACTGAACGAC+GGG + chr4.1:37627851-37627870 MS.gene67385:CDS 55.0%
CTGCTTTACCTCCTGTGTGG+AGG - chr4.1:37628602-37628621 None:intergenic 55.0%
GAAGATGAGCAGGGTAGGCT+TGG + chr4.1:37628351-37628370 MS.gene67385:CDS 55.0%
GAGATCCCGTCGTTCAGTGT+TGG - chr4.1:37627859-37627878 None:intergenic 55.0%
GATCCCGTCGTTCAGTGTTG+GGG - chr4.1:37627857-37627876 None:intergenic 55.0%
! GAACGACGGGATCTCTGAGA+TGG + chr4.1:37627864-37627883 MS.gene67385:CDS 55.0%
GAATCGCACAACCGCCGGAA+CGG - chr4.1:37628221-37628240 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 37627703 37628983 37627703 ID=MS.gene67385
chr4.1 mRNA 37627703 37628983 37627703 ID=MS.gene67385.t1;Parent=MS.gene67385
chr4.1 exon 37627703 37628983 37627703 ID=MS.gene67385.t1.exon1;Parent=MS.gene67385.t1
chr4.1 CDS 37627703 37628983 37627703 ID=cds.MS.gene67385.t1;Parent=MS.gene67385.t1
Gene Sequence

>MS.gene67385

ATGCTAGGCACAGAGTTTTGTGGCAAATTAATCAAAAGAACCAAGAATTTGGGTCTAGATGAGTACAAATTTCTCCTCAAAGCCATTGTAAGTTCCGGAATCGGCGAGCAAACTTACGCACCAAGAAACATCTTTGAAGGCCGCGAATCATCCCCAACACTGAACGACGGGATCTCTGAGATGGAAGAGTTTTTCAACGACAGCATTGCGAAACTCCTTGCTAGATCAGCGATTTCCCCTTCCGAAATCGACGTTCTTGTCGTCAACATCTCAATGCTCGCCATTCTTCCTTCTTTATCTTCGCGAATCATTAACCGTTACAAAATGAGACACGACGTAAAAGTGTACAATCTCACCGGAATGGGTTGTAGTGCAAGTCTTATTTCATTAGACATTGTTAAAAACATTTTCAAATCACAAAGAAATAAGTTAGCACTTTTGGTCACATCAGAGTCTCTTAGTCCAAATTGGTACACTGGCAATGATAGATCAATGATCCTAGCCAATTGTCTTTTCCGTTCCGGCGGTTGTGCGATTCTTTTGACAAACAAAAGATCCTTAAAAAACAGAAGCATACTGAAATTGAAGTGTTTAGTACGAACGCACCACGGCGCAAGAGAAGACTCTTACAATTGTTGCATTCAAAAGGAAGATGAGCAGGGTAGGCTTGGTTTTCATTTAGGGAAAACTCTCCCAAAAGCAGCAACAAAAGTCTTTGTTGACAATTTAAGGGTAATTTCACCCAAAATTTTGCCAACAAGGGAATTGCTTAGGTTTCTTCTTGTGTTACTTTTCAAGAAACTTAAAATAGCTACTAGTTCTTCTAAGTCTTCAACTGGTGGAACAATATCTACAAAATCACCATTAAATTTCAAAACTGGTGTTGATCATTTTTGCCTCCACACAGGAGGTAAAGCAGTGATTGATGGAATTGGAATGAGTTTAGATCTAAGTGAATATGATCTTGAGCCTGCAAGAATGACACTACATCGTTTTGGTAACACTTCTGCTGGTAGCTTGTGGTATGTGTTAGGTTACATGGAAGCAAAAAAGAGGCTCAAAAAAGGTGATAGGGTTTTTATGATAAGTTTTGGTGCTGGATTCAAATGCAATAGTTGTTTGTGGGAAGTGATGAAAGATGTTGGAGATGCAAATGTTTGGGAAGATTGTATTGATAATTATCCACCAAAGTCTTTGGTCAATTCTTTCATGGAGAAGTATAGTTGGGTCAATGAAGTTGAGGATCCTAACAACTATGATCTTCCTGACTTTCTCAAGTGA
Protein sequence

>MS.gene67385.t1

MLGTEFCGKLIKRTKNLGLDEYKFLLKAIVSSGIGEQTYAPRNIFEGRESSPTLNDGISEMEEFFNDSIAKLLARSAISPSEIDVLVVNISMLAILPSLSSRIINRYKMRHDVKVYNLTGMGCSASLISLDIVKNIFKSQRNKLALLVTSESLSPNWYTGNDRSMILANCLFRSGGCAILLTNKRSLKNRSILKLKCLVRTHHGAREDSYNCCIQKEDEQGRLGFHLGKTLPKAATKVFVDNLRVISPKILPTRELLRFLLVLLFKKLKIATSSSKSSTGGTISTKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSAGSLWYVLGYMEAKKRLKKGDRVFMISFGAGFKCNSCLWEVMKDVGDANVWEDCIDNYPPKSLVNSFMEKYSWVNEVEDPNNYDLPDFLK