Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67435.t1 | XP_013460772.1 | 96.2 | 494 | 19 | 0 | 1 | 494 | 1 | 494 | 2.10E-281 | 977.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67435.t1 | Q54ND5 | 24.6 | 456 | 276 | 9 | 56 | 462 | 102 | 538 | 2.1e-32 | 141.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67435.t1 | A0A072UZE6 | 96.2 | 494 | 19 | 0 | 1 | 494 | 1 | 494 | 1.5e-281 | 977.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene67435 | 0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene67435 | 0.804097 | 2.54E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene67435 | 0.849555 | 3.00E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67435.t1 | MTR_3g071580 | 96.154 | 494 | 19 | 0 | 1 | 494 | 1 | 494 | 0.0 | 957 |
| MS.gene67435.t1 | MTR_3g071580 | 95.910 | 489 | 20 | 0 | 1 | 489 | 1 | 489 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67435.t1 | AT1G09870 | 66.049 | 486 | 151 | 4 | 2 | 482 | 3 | 479 | 0.0 | 677 |
Find 118 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAGGGAGTTGGATAATT+TGG | 0.198521 | 3.1:-58549080 | MS.gene67435:CDS |
| AACAAACTAAAATTCATCTT+TGG | 0.224993 | 3.1:+58545282 | None:intergenic |
| TCTGCATTAGTTGGGCGATA+TGG | 0.234052 | 3.1:-58547788 | MS.gene67435:CDS |
| CTCACCTGAGTTGCCTTTAT+AGG | 0.241933 | 3.1:+58548839 | None:intergenic |
| GGAAAAGCCACTGAAATATT+TGG | 0.256257 | 3.1:+58545326 | None:intergenic |
| AGAGTTCCGTCTTGGTTAAA+TGG | 0.267555 | 3.1:-58549001 | MS.gene67435:CDS |
| ACCACAAGATTTAAATGAAT+TGG | 0.280692 | 3.1:+58549952 | None:intergenic |
| ACAAACTAAAATTCATCTTT+GGG | 0.293290 | 3.1:+58545283 | None:intergenic |
| TAAACTTAAGGAACCTATCT+TGG | 0.324606 | 3.1:-58547822 | MS.gene67435:CDS |
| GGTTACGAGAGCAGGATTTC+AGG | 0.325108 | 3.1:-58547868 | MS.gene67435:intron |
| TCAGCTAGTGCTGTGGCATT+TGG | 0.337150 | 3.1:-58548541 | MS.gene67435:CDS |
| GCGTTTATTCTGAAGGGTTA+TGG | 0.350250 | 3.1:-58547129 | MS.gene67435:CDS |
| AATTGTTTGAACTTGGAATC+AGG | 0.360982 | 3.1:-58548916 | MS.gene67435:CDS |
| ATTAACAGAACAAGAGTGAT+TGG | 0.372565 | 3.1:+58550220 | None:intergenic |
| GGTTTATTTCTTGAAGAGTC+TGG | 0.374217 | 3.1:-58546053 | MS.gene67435:intron |
| GAAAGAGCGGAAATTGTCTT+TGG | 0.377125 | 3.1:-58549026 | MS.gene67435:CDS |
| AGCCTCCACAGAAAAGAAAA+TGG | 0.377131 | 3.1:-58545882 | MS.gene67435:CDS |
| GGATAATTTGGCAGCTCAAT+TGG | 0.379258 | 3.1:-58549068 | MS.gene67435:CDS |
| CTGCATTAGTTGGGCGATAT+GGG | 0.380850 | 3.1:-58547787 | MS.gene67435:CDS |
| GAGGAAGAATTGTTTGAACT+TGG | 0.384481 | 3.1:-58548923 | MS.gene67435:CDS |
| TCCTTGGCATGGAAGGCTTA+AGG | 0.388404 | 3.1:-58548969 | MS.gene67435:CDS |
| TTCAGTGGCAATGGAACTCT+TGG | 0.391689 | 3.1:-58548508 | MS.gene67435:CDS |
| TCCAGACATATATCCTATAA+AGG | 0.391852 | 3.1:-58548852 | MS.gene67435:CDS |
| GAGATTACATCTGCATTAGT+TGG | 0.394671 | 3.1:-58547797 | MS.gene67435:CDS |
| AAATCACTAAATTATAGAAT+GGG | 0.395225 | 3.1:-58547105 | MS.gene67435:CDS |
| CCTTGGCATGGAAGGCTTAA+GGG | 0.397783 | 3.1:-58548968 | MS.gene67435:CDS |
| GTGTACATAGATTACATTGC+TGG | 0.401467 | 3.1:-58547172 | MS.gene67435:intron |
| AAGCTTACCGGCATTGGAAT+GGG | 0.404546 | 3.1:+58545745 | None:intergenic |
| CTGTATAGTTGTCCTGTGTC+AGG | 0.406400 | 3.1:-58545814 | MS.gene67435:CDS |
| TGAATTGGAGTACATCCTTC+AGG | 0.410928 | 3.1:+58549967 | None:intergenic |
| GTCCCATTCTCATGTCTGCT+TGG | 0.418022 | 3.1:-58546074 | MS.gene67435:CDS |
| CTGTCCGTTTGAAGTATTCA+AGG | 0.418996 | 3.1:-58545544 | MS.gene67435:intron |
| CTCAATTGGAAGATCTTGTA+AGG | 0.426286 | 3.1:-58549054 | MS.gene67435:CDS |
| TCTCTGGTTCTTATGTAAAC+AGG | 0.431034 | 3.1:-58547735 | MS.gene67435:intron |
| TCCAATTCATTTAAATCTTG+TGG | 0.437346 | 3.1:-58549953 | MS.gene67435:intron |
| CTGTAAAAGCTTACCGGCAT+TGG | 0.439159 | 3.1:+58545739 | None:intergenic |
| CTCCAACAAAGAAAAGGATA+AGG | 0.449527 | 3.1:-58549096 | MS.gene67435:CDS |
| TAAATCACTAAATTATAGAA+TGG | 0.454360 | 3.1:-58547106 | MS.gene67435:CDS |
| CACAGCACTAGCTGATGCTC+GGG | 0.455439 | 3.1:+58548549 | None:intergenic |
| GGAAATCTCCTTGGCATGGA+AGG | 0.458503 | 3.1:-58548976 | MS.gene67435:CDS |
| CTGACACAGGACAACTATAC+AGG | 0.459032 | 3.1:+58545815 | None:intergenic |
| GGCAATGGAACTCTTGGAAC+TGG | 0.464325 | 3.1:-58548502 | MS.gene67435:CDS |
| GACACCTTGAATACTTCAAA+CGG | 0.469906 | 3.1:+58545540 | None:intergenic |
| ACCCGCAGTTGATAAACTTA+AGG | 0.477325 | 3.1:-58547834 | MS.gene67435:CDS |
| CTCGTTCTCCAACAAAGAAA+AGG | 0.480627 | 3.1:-58549102 | MS.gene67435:CDS |
| AACATCTCTCCACCGTGTCC+AGG | 0.481498 | 3.1:-58550138 | MS.gene67435:intron |
| TTCCGTCTTGGTTAAATGGA+TGG | 0.483104 | 3.1:-58548997 | MS.gene67435:CDS |
| ATAACAGGAAGCATCCTTGT+TGG | 0.485453 | 3.1:-58547582 | MS.gene67435:intron |
| AAAGCTTACCGGCATTGGAA+TGG | 0.488189 | 3.1:+58545744 | None:intergenic |
| TTGGAATCAGGATTAGAGAA+AGG | 0.488890 | 3.1:-58548904 | MS.gene67435:CDS |
| TAGTGCTGTGGCATTTGGAA+TGG | 0.489961 | 3.1:-58548536 | MS.gene67435:CDS |
| GGCTTTGGAGGTAGCTCCAA+AGG | 0.490471 | 3.1:+58545901 | None:intergenic |
| AGTGCTGTGGCATTTGGAAT+GGG | 0.491271 | 3.1:-58548535 | MS.gene67435:CDS |
| CTTTGGAGAGAGTTCCGTCT+TGG | 0.491832 | 3.1:-58549009 | MS.gene67435:CDS |
| AAAGAAAAGGATAAGGGAGT+TGG | 0.492650 | 3.1:-58549089 | MS.gene67435:CDS |
| TCCACAGAAAAGAAAATGGC+GGG | 0.494438 | 3.1:-58545878 | MS.gene67435:CDS |
| TCCTTAAGTTTATCAACTGC+GGG | 0.494728 | 3.1:+58547833 | None:intergenic |
| TTGAGAAATGTAAAATTGAA+AGG | 0.497137 | 3.1:+58550191 | None:intergenic |
| AGATTACATCTGCATTAGTT+GGG | 0.499233 | 3.1:-58547796 | MS.gene67435:CDS |
| GCCTTTATAGGATATATGTC+TGG | 0.504217 | 3.1:+58548851 | None:intergenic |
| AACCAAGCAGACATGAGAAT+GGG | 0.505960 | 3.1:+58546072 | None:intergenic |
| TGAAGATGTTGTTCAATCCA+TGG | 0.509427 | 3.1:-58547070 | MS.gene67435:CDS |
| AGCATGTTGTTACCAGCAAA+AGG | 0.511702 | 3.1:+58545841 | None:intergenic |
| GGCAGATTACATCATCTCTC+TGG | 0.512633 | 3.1:-58547751 | MS.gene67435:CDS |
| CTTGGAGGCGTTTATTCTGA+AGG | 0.514437 | 3.1:-58547136 | MS.gene67435:CDS |
| GATGTAATCTCATCCAAGAT+AGG | 0.518769 | 3.1:+58547809 | None:intergenic |
| TATTCACTACAGGGTTGTCA+TGG | 0.519764 | 3.1:-58545576 | MS.gene67435:intron |
| AAACCAAGCAGACATGAGAA+TGG | 0.520129 | 3.1:+58546071 | None:intergenic |
| TAGTTTCTGCATGAGCAAAC+CGG | 0.522173 | 3.1:+58546099 | None:intergenic |
| GGGTTGTCACCTTTCGCTAG+TGG | 0.522205 | 3.1:+58545304 | None:intergenic |
| CCACAGCACTAGCTGATGCT+CGG | 0.526889 | 3.1:+58548548 | None:intergenic |
| TTCCTTAAGTTTATCAACTG+CGG | 0.537280 | 3.1:+58547832 | None:intergenic |
| GGTTGTCACCTTTCGCTAGT+GGG | 0.540533 | 3.1:+58545305 | None:intergenic |
| CAAGCTATTAAAGCTGAAGA+AGG | 0.543650 | 3.1:-58547045 | MS.gene67435:intron |
| TTCCATCCATTTAACCAAGA+CGG | 0.547637 | 3.1:+58548995 | None:intergenic |
| TGAACACCCCATTCCAATGC+CGG | 0.550627 | 3.1:-58545752 | MS.gene67435:intron |
| TGAACAACATCTTCAAGTAA+TGG | 0.551000 | 3.1:+58547078 | None:intergenic |
| AGCTTTAATAGCTTGCTCCA+TGG | 0.551216 | 3.1:+58547053 | None:intergenic |
| TCCAACAAAGAAAAGGATAA+GGG | 0.553218 | 3.1:-58549095 | MS.gene67435:CDS |
| TTGGAGGCGTTTATTCTGAA+GGG | 0.560325 | 3.1:-58547135 | MS.gene67435:CDS |
| TGAGTTAATTAGACTAGGAG+AGG | 0.561048 | 3.1:-58548942 | MS.gene67435:CDS |
| TAAATGGATGGAAATCTCCT+TGG | 0.561808 | 3.1:-58548985 | MS.gene67435:CDS |
| ATTCCTTCTAAAATTCCTGA+AGG | 0.565594 | 3.1:-58549982 | MS.gene67435:CDS |
| CATAGATTACATTGCTGGAG+TGG | 0.565831 | 3.1:-58547167 | MS.gene67435:intron |
| ATATCCTATAAAGGCAACTC+AGG | 0.566710 | 3.1:-58548843 | MS.gene67435:intron |
| CCCTTAAGCCTTCCATGCCA+AGG | 0.571283 | 3.1:+58548968 | None:intergenic |
| GGATGGAAATCTCCTTGGCA+TGG | 0.574233 | 3.1:-58548980 | MS.gene67435:CDS |
| TTACATTCCCAGGCAAGGCA+TGG | 0.576004 | 3.1:-58549127 | MS.gene67435:intron |
| GCTGGAGTGGACAGATGACT+TGG | 0.580590 | 3.1:-58547154 | MS.gene67435:CDS |
| TGATTGTTGTCATAACTACA+AGG | 0.582799 | 3.1:-58548416 | MS.gene67435:intron |
| GTTTCCGAGTTTGTTTGATG+AGG | 0.592314 | 3.1:-58548882 | MS.gene67435:CDS |
| CAAACTAAAATTCATCTTTG+GGG | 0.598005 | 3.1:+58545284 | None:intergenic |
| TGATATTCCAAATATTTCAG+TGG | 0.604907 | 3.1:-58545333 | MS.gene67435:CDS |
| TTATAGGATATATGTCTGGA+TGG | 0.605414 | 3.1:+58548855 | None:intergenic |
| AGCAAGAGCTGAAGTCCTCA+CGG | 0.606553 | 3.1:-58545360 | MS.gene67435:CDS |
| GACTACAAAAGTACCTCCGA+TGG | 0.608670 | 3.1:+58547527 | None:intergenic |
| CTCCACAGAAAAGAAAATGG+CGG | 0.614630 | 3.1:-58545879 | MS.gene67435:CDS |
| AATCACTAAATTATAGAATG+GGG | 0.619098 | 3.1:-58547104 | MS.gene67435:CDS |
| AGCTTACCGGCATTGGAATG+GGG | 0.620507 | 3.1:+58545746 | None:intergenic |
| GGAGTGGACAGATGACTTGG+AGG | 0.620597 | 3.1:-58547151 | MS.gene67435:CDS |
| AGAGTTTGACAAAATCCAGA+AGG | 0.633058 | 3.1:-58545929 | MS.gene67435:CDS |
| CCGAGCATCAGCTAGTGCTG+TGG | 0.634420 | 3.1:-58548548 | MS.gene67435:CDS |
| TAGTCCTCATCAAACAAACT+CGG | 0.636591 | 3.1:+58548878 | None:intergenic |
| TCAGCATGATGTCACTAGCA+CGG | 0.641327 | 3.1:+58548446 | None:intergenic |
| ACTACAAAAGTACCTCCGAT+GGG | 0.652789 | 3.1:+58547528 | None:intergenic |
| CCACAGAAAAGAAAATGGCG+GGG | 0.653168 | 3.1:-58545877 | MS.gene67435:CDS |
| TCAATTGGAAGATCTTGTAA+GGG | 0.653285 | 3.1:-58549053 | MS.gene67435:CDS |
| GTTACCAGCAAAAGGAGCCA+CGG | 0.657381 | 3.1:+58545849 | None:intergenic |
| ACAGCACTAGCTGATGCTCG+GGG | 0.659608 | 3.1:+58548550 | None:intergenic |
| AAAATGGCGGGGCAGCACCG+TGG | 0.668105 | 3.1:-58545866 | MS.gene67435:CDS |
| TCATAGTCATGCTTCCGATG+AGG | 0.671044 | 3.1:+58545400 | None:intergenic |
| TTGTAAGGGATGCGAAAGAG+CGG | 0.675487 | 3.1:-58549039 | MS.gene67435:CDS |
| GGCGGTGAGTTAATTAGACT+AGG | 0.684077 | 3.1:-58548947 | MS.gene67435:CDS |
| TTGGAATATCATACTCCGTG+AGG | 0.705221 | 3.1:+58545345 | None:intergenic |
| GGAGAGAAACCTGGACACGG+TGG | 0.707163 | 3.1:+58550129 | None:intergenic |
| TTGATCAGTTATATCCAACA+AGG | 0.711218 | 3.1:+58547568 | None:intergenic |
| TAGGGAGAGAAACCTGGACA+CGG | 0.718165 | 3.1:+58550126 | None:intergenic |
| TGGCATGGAAGGCTTAAGGG+CGG | 0.726071 | 3.1:-58548965 | MS.gene67435:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATATCCATAAAAAA+AGG | + | chr3.1:58547624-58547643 | None:intergenic | 10.0% |
| !! | TATTTAAATAATATTTACAG+AGG | + | chr3.1:58548050-58548069 | None:intergenic | 10.0% |
| !!! | AATTTTATCAATTTCTATTT+TGG | - | chr3.1:58549515-58549534 | MS.gene67435:intron | 10.0% |
| !!! | TATTTTATTTATATTCCTTT+TGG | - | chr3.1:58549067-58549086 | MS.gene67435:CDS | 10.0% |
| !! | AAATCACTAAATTATAGAAT+GGG | - | chr3.1:58548412-58548431 | MS.gene67435:intron | 15.0% |
| !! | AACAATAATTTATATGCATT+TGG | + | chr3.1:58548203-58548222 | None:intergenic | 15.0% |
| !! | AACTATCAATAATAAAAAGT+TGG | + | chr3.1:58545916-58545935 | None:intergenic | 15.0% |
| !! | AATAAAATTTAAAAGATGTC+AGG | - | chr3.1:58548066-58548085 | MS.gene67435:intron | 15.0% |
| !! | TAAATCACTAAATTATAGAA+TGG | - | chr3.1:58548411-58548430 | MS.gene67435:intron | 15.0% |
| !! | TTATGGATATATAATTTCTT+TGG | - | chr3.1:58547628-58547647 | MS.gene67435:intron | 15.0% |
| !!! | AAATTGATAATATAGAATGT+TGG | + | chr3.1:58545426-58545445 | None:intergenic | 15.0% |
| !!! | AACTATGCATTTTTTAATAA+CGG | - | chr3.1:58549110-58549129 | MS.gene67435:CDS | 15.0% |
| !!! | TTTAGCATTTTTTAATATTG+AGG | - | chr3.1:58548498-58548517 | MS.gene67435:CDS | 15.0% |
| !! | AATCACTAAATTATAGAATG+GGG | - | chr3.1:58548413-58548432 | MS.gene67435:intron | 20.0% |
| !! | AATTCCAGTTAGTATATAAT+TGG | - | chr3.1:58549196-58549215 | MS.gene67435:intron | 20.0% |
| !! | AGAAAATTAACAAACACAAT+TGG | + | chr3.1:58545472-58545491 | None:intergenic | 20.0% |
| !! | GAAGAAGATTAAAATCAATA+TGG | + | chr3.1:58549002-58549021 | None:intergenic | 20.0% |
| !! | GACACTAAAATTTATGAAAT+TGG | + | chr3.1:58547222-58547241 | None:intergenic | 20.0% |
| !! | TTGAGAAATGTAAAATTGAA+AGG | + | chr3.1:58545329-58545348 | None:intergenic | 20.0% |
| !!! | AAACTTCATTTTTATGACAT+CGG | - | chr3.1:58546024-58546043 | MS.gene67435:intron | 20.0% |
| !!! | ATGAAATTGACTTGATATTT+TGG | - | chr3.1:58546909-58546928 | MS.gene67435:intron | 20.0% |
| !!! | CATAGTTTTGTTTTTGTTTT+AGG | - | chr3.1:58546164-58546183 | MS.gene67435:intron | 20.0% |
| !!! | TGATAGTTTTTTAAACCATT+GGG | - | chr3.1:58545928-58545947 | MS.gene67435:CDS | 20.0% |
| !!! | TGTTTGTTAATTTTCTTTGA+AGG | - | chr3.1:58545476-58545495 | MS.gene67435:intron | 20.0% |
| !!! | TTCTCATTGTTTTGATTTAA+TGG | - | chr3.1:58549220-58549239 | MS.gene67435:intron | 20.0% |
| !!! | TTGATAGTTTTTTAAACCAT+TGG | - | chr3.1:58545927-58545946 | MS.gene67435:CDS | 20.0% |
| !!! | TTGTTTGTTTGTTTTAGAAA+CGG | + | chr3.1:58546304-58546323 | None:intergenic | 20.0% |
| ! | AAAAAATGGAAATGAGTCAT+AGG | + | chr3.1:58549347-58549366 | None:intergenic | 25.0% |
| ! | AAAGAAACTGAAGTAGTAAA+AGG | - | chr3.1:58548159-58548178 | MS.gene67435:intron | 25.0% |
| ! | AACAAACAAACAAAAACTAG+TGG | - | chr3.1:58546311-58546330 | MS.gene67435:intron | 25.0% |
| ! | AAGAAACTGAAGTAGTAAAA+GGG | - | chr3.1:58548160-58548179 | MS.gene67435:intron | 25.0% |
| ! | AATGATCATACTATTCCATT+TGG | + | chr3.1:58546358-58546377 | None:intergenic | 25.0% |
| ! | AATTTGTGATGGTTTATAAC+AGG | - | chr3.1:58547920-58547939 | MS.gene67435:intron | 25.0% |
| ! | ACCACAAGATTTAAATGAAT+TGG | + | chr3.1:58545568-58545587 | None:intergenic | 25.0% |
| ! | ATTATGAAGTGTGTTTAAAG+AGG | - | chr3.1:58547492-58547511 | MS.gene67435:intron | 25.0% |
| ! | CTACAGAAGCAATAAAAAAA+TGG | + | chr3.1:58549361-58549380 | None:intergenic | 25.0% |
| ! | GAAACCAATTATATACTAAC+TGG | + | chr3.1:58549203-58549222 | None:intergenic | 25.0% |
| ! | GATTTGATCTATTGAATATC+TGG | - | chr3.1:58546728-58546747 | MS.gene67435:intron | 25.0% |
| ! | TATATACATATTTGCTCTTC+AGG | - | chr3.1:58548550-58548569 | MS.gene67435:CDS | 25.0% |
| ! | TCACTTTCCTAAATTATTAC+GGG | - | chr3.1:58545721-58545740 | MS.gene67435:intron | 25.0% |
| ! | TCCAATTCATTTAAATCTTG+TGG | - | chr3.1:58545564-58545583 | MS.gene67435:CDS | 25.0% |
| ! | TGATATTCCAAATATTTCAG+TGG | - | chr3.1:58550184-58550203 | MS.gene67435:CDS | 25.0% |
| ! | TGCATAGTTCAAGAAAATAT+AGG | + | chr3.1:58549099-58549118 | None:intergenic | 25.0% |
| ! | TGTTATAAACCATCACAAAT+TGG | + | chr3.1:58547921-58547940 | None:intergenic | 25.0% |
| ! | TTACATTAGAGTGACAAATA+TGG | + | chr3.1:58547454-58547473 | None:intergenic | 25.0% |
| ! | TTATTGTGAATAGCTGAATT+TGG | - | chr3.1:58549841-58549860 | MS.gene67435:intron | 25.0% |
| ! | TTTCCTGCTTTATAAGAAAA+TGG | - | chr3.1:58548975-58548994 | MS.gene67435:CDS | 25.0% |
| !! | ATAAGAAGCATATTTGCAAA+TGG | + | chr3.1:58547244-58547263 | None:intergenic | 25.0% |
| !! | CTTAGAATCTCTTTTGATAT+TGG | - | chr3.1:58546060-58546079 | MS.gene67435:CDS | 25.0% |
| !! | GTCACTTTCCTAAATTATTA+CGG | - | chr3.1:58545720-58545739 | MS.gene67435:intron | 25.0% |
| !! | GTGATTTTCAGTATTCTTAT+AGG | - | chr3.1:58547574-58547593 | MS.gene67435:CDS | 25.0% |
| !! | TCTTTTGATATTGGTGTATT+AGG | - | chr3.1:58546069-58546088 | MS.gene67435:CDS | 25.0% |
| !! | TTTTATATTGTTATGCTGCT+TGG | - | chr3.1:58545840-58545859 | MS.gene67435:CDS | 25.0% |
| !! | TTTTTAAACCATTGGGAATT+GGG | - | chr3.1:58545935-58545954 | MS.gene67435:intron | 25.0% |
| !!! | AATTGGGTTTTAAAACCATA+GGG | - | chr3.1:58545951-58545970 | MS.gene67435:intron | 25.0% |
| !!! | GTTAATTTTCTTTGAAGGTA+CGG | - | chr3.1:58545481-58545500 | MS.gene67435:intron | 25.0% |
| !!! | TATCTTCATTTTTTCCTTCT+AGG | - | chr3.1:58546703-58546722 | MS.gene67435:intron | 25.0% |
| !!! | TATTTCTGGACCTTTTTTTA+TGG | - | chr3.1:58547611-58547630 | MS.gene67435:intron | 25.0% |
| !!! | TGTTTTTGTTTTAGGAAGTT+TGG | - | chr3.1:58546172-58546191 | MS.gene67435:intron | 25.0% |
| !!! | TTTTTTAAACCATTGGGAAT+TGG | - | chr3.1:58545934-58545953 | MS.gene67435:intron | 25.0% |
| AAAAAATAGTTGCACCTCAT+CGG | - | chr3.1:58550103-58550122 | MS.gene67435:intron | 30.0% | |
| AAAGAACACGGAAAATCAAA+AGG | + | chr3.1:58547833-58547852 | None:intergenic | 30.0% | |
| AATTGTTTGAACTTGGAATC+AGG | - | chr3.1:58546601-58546620 | MS.gene67435:intron | 30.0% | |
| ACAACCTTTGTCAATGTTTA+TGG | - | chr3.1:58549262-58549281 | MS.gene67435:intron | 30.0% | |
| ACTAATATAGACATGGACAT+TGG | + | chr3.1:58545774-58545793 | None:intergenic | 30.0% | |
| ACTTCATAATCAACCTATGA+AGG | + | chr3.1:58547482-58547501 | None:intergenic | 30.0% | |
| AGAATGTTGGAAAACATGTT+AGG | + | chr3.1:58545413-58545432 | None:intergenic | 30.0% | |
| AGATTACATCTGCATTAGTT+GGG | - | chr3.1:58547721-58547740 | MS.gene67435:intron | 30.0% | |
| ATAACACTAACCAAAGTGAA+AGG | + | chr3.1:58546269-58546288 | None:intergenic | 30.0% | |
| ATAATCATTTACTAGTGCAG+TGG | - | chr3.1:58547864-58547883 | MS.gene67435:intron | 30.0% | |
| ATAGATCAAATCTACCTAGA+AGG | + | chr3.1:58546720-58546739 | None:intergenic | 30.0% | |
| ATCAATGTGCAAGATTAATC+TGG | - | chr3.1:58550029-58550048 | MS.gene67435:intron | 30.0% | |
| ATTAACAGAACAAGAGTGAT+TGG | + | chr3.1:58545300-58545319 | None:intergenic | 30.0% | |
| ATTTATGACTGTTGAAACGA+TGG | - | chr3.1:58545870-58545889 | MS.gene67435:CDS | 30.0% | |
| CAACCTTTGTCAATGTTTAT+GGG | - | chr3.1:58549263-58549282 | MS.gene67435:intron | 30.0% | |
| CTAATCACTTCTATACCAAA+TGG | - | chr3.1:58546340-58546359 | MS.gene67435:intron | 30.0% | |
| GAACAAGACGACTTTAATAT+AGG | + | chr3.1:58548582-58548601 | None:intergenic | 30.0% | |
| GAATGTTGGAAAACATGTTA+GGG | + | chr3.1:58545412-58545431 | None:intergenic | 30.0% | |
| GCTATTCACAATAAAACCAT+TGG | + | chr3.1:58549835-58549854 | None:intergenic | 30.0% | |
| GTGTATTAGGCTGTTATATT+GGG | - | chr3.1:58546082-58546101 | MS.gene67435:CDS | 30.0% | |
| TAAACTTAAGGAACCTATCT+TGG | - | chr3.1:58547695-58547714 | MS.gene67435:intron | 30.0% | |
| TAGTGTCTGTAGTTTATTTC+TGG | - | chr3.1:58547597-58547616 | MS.gene67435:intron | 30.0% | |
| TCAATTGGAAGATCTTGTAA+GGG | - | chr3.1:58546464-58546483 | MS.gene67435:intron | 30.0% | |
| TCCAACAAAGAAAAGGATAA+GGG | - | chr3.1:58546422-58546441 | MS.gene67435:intron | 30.0% | |
| TCCAGACATATATCCTATAA+AGG | - | chr3.1:58546665-58546684 | MS.gene67435:intron | 30.0% | |
| TGAACAACATCTTCAAGTAA+TGG | + | chr3.1:58548442-58548461 | None:intergenic | 30.0% | |
| TGATGTGATATGTGATCAAA+TGG | - | chr3.1:58548014-58548033 | MS.gene67435:intron | 30.0% | |
| TGATTGTTGTCATAACTACA+AGG | - | chr3.1:58547101-58547120 | MS.gene67435:CDS | 30.0% | |
| TGCAGTTAGTTATCATATCA+AGG | + | chr3.1:58548140-58548159 | None:intergenic | 30.0% | |
| TGGAATAGTATGATCATTGA+TGG | - | chr3.1:58546360-58546379 | MS.gene67435:intron | 30.0% | |
| TGTGTGAACTTAAAAGAACA+CGG | + | chr3.1:58547845-58547864 | None:intergenic | 30.0% | |
| TTATAGGATATATGTCTGGA+TGG | + | chr3.1:58546665-58546684 | None:intergenic | 30.0% | |
| TTCCTTAAGTTTATCAACTG+CGG | + | chr3.1:58547688-58547707 | None:intergenic | 30.0% | |
| TTGATCAGTTATATCCAACA+AGG | + | chr3.1:58547952-58547971 | None:intergenic | 30.0% | |
| TTTATGACTGTTGAAACGAT+GGG | - | chr3.1:58545871-58545890 | MS.gene67435:CDS | 30.0% | |
| TTTGTCACTCTAATGTAAAG+AGG | - | chr3.1:58547456-58547475 | MS.gene67435:intron | 30.0% | |
| ! | AAATATAGGCTTTAGCCAAA+AGG | + | chr3.1:58549085-58549104 | None:intergenic | 30.0% |
| ! | ATGAAGCACTAATATAGACA+TGG | + | chr3.1:58545781-58545800 | None:intergenic | 30.0% |
| ! | TAGCTCTATTGATGTACATT+GGG | - | chr3.1:58547545-58547564 | MS.gene67435:CDS | 30.0% |
| ! | TCAATTGTCACTAGTAGTTT+TGG | - | chr3.1:58546766-58546785 | MS.gene67435:intron | 30.0% |
| !! | ATTCCTTCTAAAATTCCTGA+AGG | - | chr3.1:58545535-58545554 | MS.gene67435:intron | 30.0% |
| !! | TTAGCTCTATTGATGTACAT+TGG | - | chr3.1:58547544-58547563 | MS.gene67435:CDS | 30.0% |
| !!! | GAATTGGGTTTTAAAACCAT+AGG | - | chr3.1:58545950-58545969 | MS.gene67435:intron | 30.0% |
| !!! | GTAGACATTGTTGGTTTTTA+AGG | - | chr3.1:58547131-58547150 | MS.gene67435:CDS | 30.0% |
| !!! | TCGTTTTGTTATTCACTACA+GGG | - | chr3.1:58549932-58549951 | MS.gene67435:intron | 30.0% |
| !!! | TGGTTTTATTGCAAAGTAGT+GGG | - | chr3.1:58549535-58549554 | MS.gene67435:intron | 30.0% |
| !!! | TTCATTATGCGTACTGATTT+TGG | - | chr3.1:58545996-58546015 | MS.gene67435:intron | 30.0% |
| !!! | TTCGTTTTGTTATTCACTAC+AGG | - | chr3.1:58549931-58549950 | MS.gene67435:intron | 30.0% |
| !!! | TTGGTTTTATTGCAAAGTAG+TGG | - | chr3.1:58549534-58549553 | MS.gene67435:intron | 30.0% |
| !!! | TTTGTTTTAGGAAGTTTGGA+GGG | - | chr3.1:58546176-58546195 | MS.gene67435:intron | 30.0% |
| !!! | TTTTAAAACCCAATTCCCAA+TGG | + | chr3.1:58545946-58545965 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTAGGAAGTTTGG+AGG | - | chr3.1:58546175-58546194 | MS.gene67435:intron | 30.0% |
| AAAGAAAAGGATAAGGGAGT+TGG | - | chr3.1:58546428-58546447 | MS.gene67435:intron | 35.0% | |
| AAGAGTCAAGTTCGTCTTTA+AGG | + | chr3.1:58548612-58548631 | None:intergenic | 35.0% | |
| AATCCAGAAGGAAAAACCTT+TGG | - | chr3.1:58549600-58549619 | MS.gene67435:intron | 35.0% | |
| AGAGTTTGACAAAATCCAGA+AGG | - | chr3.1:58549588-58549607 | MS.gene67435:intron | 35.0% | |
| AGTTATGCATCTCTCTAATG+TGG | - | chr3.1:58546934-58546953 | MS.gene67435:intron | 35.0% | |
| ATATCCTATAAAGGCAACTC+AGG | - | chr3.1:58546674-58546693 | MS.gene67435:intron | 35.0% | |
| CAAGAACTGTAAAAGCTTAC+CGG | + | chr3.1:58549787-58549806 | None:intergenic | 35.0% | |
| CAAGCTATTAAAGCTGAAGA+AGG | - | chr3.1:58548472-58548491 | MS.gene67435:CDS | 35.0% | |
| CAGTTTGATCAAACTAGCAA+AGG | + | chr3.1:58548855-58548874 | None:intergenic | 35.0% | |
| CATGCATAACAACTCATTAG+TGG | + | chr3.1:58548684-58548703 | None:intergenic | 35.0% | |
| CTAGTGACAATTGATGTACA+TGG | + | chr3.1:58546760-58546779 | None:intergenic | 35.0% | |
| CTCAATTGGAAGATCTTGTA+AGG | - | chr3.1:58546463-58546482 | MS.gene67435:intron | 35.0% | |
| CTCCAACAAAGAAAAGGATA+AGG | - | chr3.1:58546421-58546440 | MS.gene67435:intron | 35.0% | |
| GACACCTTGAATACTTCAAA+CGG | + | chr3.1:58549980-58549999 | None:intergenic | 35.0% | |
| GAGATTACATCTGCATTAGT+TGG | - | chr3.1:58547720-58547739 | MS.gene67435:intron | 35.0% | |
| GAGGAAGAATTGTTTGAACT+TGG | - | chr3.1:58546594-58546613 | MS.gene67435:intron | 35.0% | |
| GATAAGGGAGTTGGATAATT+TGG | - | chr3.1:58546437-58546456 | MS.gene67435:intron | 35.0% | |
| GATGTAATCTCATCCAAGAT+AGG | + | chr3.1:58547711-58547730 | None:intergenic | 35.0% | |
| GCCTTTATAGGATATATGTC+TGG | + | chr3.1:58546669-58546688 | None:intergenic | 35.0% | |
| GGAAAAGCCACTGAAATATT+TGG | + | chr3.1:58550194-58550213 | None:intergenic | 35.0% | |
| GGTAATGTTGTAGACATTGT+TGG | - | chr3.1:58547122-58547141 | MS.gene67435:CDS | 35.0% | |
| GGTGTATTAGGCTGTTATAT+TGG | - | chr3.1:58546081-58546100 | MS.gene67435:CDS | 35.0% | |
| GTGGCACTTCAATTTAATCA+TGG | + | chr3.1:58546875-58546894 | None:intergenic | 35.0% | |
| GTGTACATAGATTACATTGC+TGG | - | chr3.1:58548345-58548364 | MS.gene67435:intron | 35.0% | |
| GTTCTTATGTAAACAGGTGA+TGG | - | chr3.1:58547788-58547807 | MS.gene67435:CDS | 35.0% | |
| TAAATGGATGGAAATCTCCT+TGG | - | chr3.1:58546532-58546551 | MS.gene67435:intron | 35.0% | |
| TAATGTAAAGAGGCCTTCAT+AGG | - | chr3.1:58547466-58547485 | MS.gene67435:intron | 35.0% | |
| TAGCTCTCACACATATAATC+AGG | - | chr3.1:58548248-58548267 | MS.gene67435:intron | 35.0% | |
| TAGTCCTCATCAAACAAACT+CGG | + | chr3.1:58546642-58546661 | None:intergenic | 35.0% | |
| TATGTTAATCTCCATCGCAA+CGG | + | chr3.1:58547417-58547436 | None:intergenic | 35.0% | |
| TCCTTAAGTTTATCAACTGC+GGG | + | chr3.1:58547687-58547706 | None:intergenic | 35.0% | |
| TCTGACACCCGTAATAATTT+AGG | + | chr3.1:58545731-58545750 | None:intergenic | 35.0% | |
| TCTGTAGAAAAACATGTTCC+TGG | - | chr3.1:58549374-58549393 | MS.gene67435:intron | 35.0% | |
| TGAAGATGTTGTTCAATCCA+TGG | - | chr3.1:58548447-58548466 | MS.gene67435:CDS | 35.0% | |
| TGAGTTAATTAGACTAGGAG+AGG | - | chr3.1:58546575-58546594 | MS.gene67435:intron | 35.0% | |
| TGTGAATAGCTGAATTTGGT+TGG | - | chr3.1:58549845-58549864 | MS.gene67435:intron | 35.0% | |
| TGTTGTGTTATGCTAACTGT+TGG | - | chr3.1:58549038-58549057 | MS.gene67435:CDS | 35.0% | |
| TTCCATCCATTTAACCAAGA+CGG | + | chr3.1:58546525-58546544 | None:intergenic | 35.0% | |
| TTGGAAGAATCAGGAAACAT+TGG | - | chr3.1:58546785-58546804 | MS.gene67435:intron | 35.0% | |
| TTGGAATCAGGATTAGAGAA+AGG | - | chr3.1:58546613-58546632 | MS.gene67435:intron | 35.0% | |
| ! | AAAGCACCTTCTAGCAAAAT+GGG | + | chr3.1:58547370-58547389 | None:intergenic | 35.0% |
| ! | CAACCCCAAAGATGAATTTT+AGG | - | chr3.1:58550230-58550249 | MS.gene67435:CDS | 35.0% |
| ! | CATCCTTCAGGAATTTTAGA+AGG | + | chr3.1:58545541-58545560 | None:intergenic | 35.0% |
| ! | GATCATTTTGTGCAAAAGAG+TGG | + | chr3.1:58550012-58550031 | None:intergenic | 35.0% |
| ! | GGTCCATTTTCTTATAAAGC+AGG | + | chr3.1:58548981-58549000 | None:intergenic | 35.0% |
| ! | GGTTTATTTCTTGAAGAGTC+TGG | - | chr3.1:58549464-58549483 | MS.gene67435:intron | 35.0% |
| ! | TCCCTTATCCTTTTCTTTGT+TGG | + | chr3.1:58546426-58546445 | None:intergenic | 35.0% |
| ! | TTTCTGTGATTTTTCTCCAC+AGG | - | chr3.1:58550080-58550099 | MS.gene67435:intron | 35.0% |
| !! | CTTCATTTTTATGACATCGG+TGG | - | chr3.1:58546027-58546046 | MS.gene67435:intron | 35.0% |
| !! | GATATGGGCTGAATTTTACA+AGG | - | chr3.1:58547745-58547764 | MS.gene67435:CDS | 35.0% |
| !! | TCTCTGGTTCTTATGTAAAC+AGG | - | chr3.1:58547782-58547801 | MS.gene67435:CDS | 35.0% |
| !! | TGCTGTCAGTTATTTTCCAA+TGG | - | chr3.1:58549816-58549835 | MS.gene67435:intron | 35.0% |
| !!! | ACATTGTTGGTTTTTAAGGC+AGG | - | chr3.1:58547135-58547154 | MS.gene67435:CDS | 35.0% |
| !!! | CTAGTAGTTTTGGAAGAATC+AGG | - | chr3.1:58546776-58546795 | MS.gene67435:intron | 35.0% |
| AAACCAAGCAGACATGAGAA+TGG | + | chr3.1:58549449-58549468 | None:intergenic | 40.0% | |
| AACCAAGCAGACATGAGAAT+GGG | + | chr3.1:58549448-58549467 | None:intergenic | 40.0% | |
| AATGGGATCGAAAGGAACAT+AGG | + | chr3.1:58547353-58547372 | None:intergenic | 40.0% | |
| ACCATCACAAATTGGACAGT+TGG | + | chr3.1:58547913-58547932 | None:intergenic | 40.0% | |
| ACGGAAAATCAAAAGGAGCT+GGG | + | chr3.1:58547826-58547845 | None:intergenic | 40.0% | |
| AGAGTTCCGTCTTGGTTAAA+TGG | - | chr3.1:58546516-58546535 | MS.gene67435:intron | 40.0% | |
| AGCATGTTGTTACCAGCAAA+AGG | + | chr3.1:58549679-58549698 | None:intergenic | 40.0% | |
| AGCCTCCACAGAAAAGAAAA+TGG | - | chr3.1:58549635-58549654 | MS.gene67435:intron | 40.0% | |
| ATCTCTCTAATGTGGCAAAC+AGG | - | chr3.1:58546942-58546961 | MS.gene67435:intron | 40.0% | |
| ATTTCTTGAAGAGTCTGGTG+AGG | - | chr3.1:58549469-58549488 | MS.gene67435:intron | 40.0% | |
| ATTTCTTTGGTTACGAGAGC+AGG | - | chr3.1:58547641-58547660 | MS.gene67435:intron | 40.0% | |
| CAGGATCTTTGTTGAGCTTA+TGG | - | chr3.1:58548267-58548286 | MS.gene67435:intron | 40.0% | |
| CATAGATTACATTGCTGGAG+TGG | - | chr3.1:58548350-58548369 | MS.gene67435:intron | 40.0% | |
| CTCCACAGAAAAGAAAATGG+CGG | - | chr3.1:58549638-58549657 | MS.gene67435:intron | 40.0% | |
| CTCGTTCTCCAACAAAGAAA+AGG | - | chr3.1:58546415-58546434 | MS.gene67435:intron | 40.0% | |
| GAAAGAGCGGAAATTGTCTT+TGG | - | chr3.1:58546491-58546510 | MS.gene67435:intron | 40.0% | |
| GCAGGATTTCAGGAAAAAGA+AGG | - | chr3.1:58547659-58547678 | MS.gene67435:intron | 40.0% | |
| GGATAATTTGGCAGCTCAAT+TGG | - | chr3.1:58546449-58546468 | MS.gene67435:intron | 40.0% | |
| TAGTTTCTGCATGAGCAAAC+CGG | + | chr3.1:58549421-58549440 | None:intergenic | 40.0% | |
| TATTCACTACAGGGTTGTCA+TGG | - | chr3.1:58549941-58549960 | MS.gene67435:intron | 40.0% | |
| TCACTTCACTCTCACTTTAG+AGG | - | chr3.1:58548751-58548770 | MS.gene67435:intron | 40.0% | |
| TCCAACTGTCCAATTTGTGA+TGG | - | chr3.1:58547909-58547928 | MS.gene67435:intron | 40.0% | |
| TCCACAGAAAAGAAAATGGC+GGG | - | chr3.1:58549639-58549658 | MS.gene67435:intron | 40.0% | |
| TCTAGCAAAATGGGATCGAA+AGG | + | chr3.1:58547361-58547380 | None:intergenic | 40.0% | |
| TCTGTGTATGCCTTTCACTT+TGG | - | chr3.1:58546256-58546275 | MS.gene67435:intron | 40.0% | |
| TGAATTGGAGTACATCCTTC+AGG | + | chr3.1:58545553-58545572 | None:intergenic | 40.0% | |
| TTCATGTCTCATTGTTGCAG+TGG | + | chr3.1:58546894-58546913 | None:intergenic | 40.0% | |
| TTCCGTCTTGGTTAAATGGA+TGG | - | chr3.1:58546520-58546539 | MS.gene67435:intron | 40.0% | |
| TTGGAATATCATACTCCGTG+AGG | + | chr3.1:58550175-58550194 | None:intergenic | 40.0% | |
| ! | AAGTGTGTTAACCTTTTCCC+AGG | - | chr3.1:58546121-58546140 | MS.gene67435:CDS | 40.0% |
| ! | CAACATTTTCCAGGCAGAAA+TGG | + | chr3.1:58547319-58547338 | None:intergenic | 40.0% |
| ! | CCATAGGGATTGAGTGTTTT+CGG | - | chr3.1:58545966-58545985 | MS.gene67435:intron | 40.0% |
| ! | CTGTCCGTTTGAAGTATTCA+AGG | - | chr3.1:58549973-58549992 | MS.gene67435:CDS | 40.0% |
| ! | GCGTTTATTCTGAAGGGTTA+TGG | - | chr3.1:58548388-58548407 | MS.gene67435:intron | 40.0% |
| ! | GTTTCCGAGTTTGTTTGATG+AGG | - | chr3.1:58546635-58546654 | MS.gene67435:intron | 40.0% |
| ! | TTCGATCCCATTTTGCTAGA+AGG | - | chr3.1:58547361-58547380 | MS.gene67435:intron | 40.0% |
| ! | TTTCTTTTCTGTGGAGGCTT+TGG | + | chr3.1:58549634-58549653 | None:intergenic | 40.0% |
| !! | ACCCGCAGTTGATAAACTTA+AGG | - | chr3.1:58547683-58547702 | MS.gene67435:intron | 40.0% |
| !! | ACTACAAAAGTACCTCCGAT+GGG | + | chr3.1:58547992-58548011 | None:intergenic | 40.0% |
| !! | AGCTTTAATAGCTTGCTCCA+TGG | + | chr3.1:58548467-58548486 | None:intergenic | 40.0% |
| !! | ATAACAGGAAGCATCCTTGT+TGG | - | chr3.1:58547935-58547954 | MS.gene67435:intron | 40.0% |
| !! | ATCAGGAAACATTGGTTCTC+AGG | - | chr3.1:58546793-58546812 | MS.gene67435:intron | 40.0% |
| !! | GAAAGCACCTTCTAGCAAAA+TGG | + | chr3.1:58547371-58547390 | None:intergenic | 40.0% |
| !! | GCTTTGAAAAAGCAAGACTC+CGG | - | chr3.1:58549399-58549418 | MS.gene67435:intron | 40.0% |
| !! | TTGGAGGCGTTTATTCTGAA+GGG | - | chr3.1:58548382-58548401 | MS.gene67435:intron | 40.0% |
| !! | TTTGGAATGGGTCTTTTCAG+TGG | - | chr3.1:58546994-58547013 | MS.gene67435:intron | 40.0% |
| !!! | GGTGCAACTATTTTTTCCTG+TGG | + | chr3.1:58550099-58550118 | None:intergenic | 40.0% |
| !!! | TTGTTGGTTTTTAAGGCAGG+AGG | - | chr3.1:58547138-58547157 | MS.gene67435:CDS | 40.0% |
| !!! | TTTTGCTAGAAGGTGCTTTC+TGG | - | chr3.1:58547371-58547390 | MS.gene67435:intron | 40.0% |
| AACTATGCTCTAGTCACCGA+AGG | + | chr3.1:58546151-58546170 | None:intergenic | 45.0% | |
| ACATGTTAGGGAGAGAAACC+TGG | + | chr3.1:58545400-58545419 | None:intergenic | 45.0% | |
| CACGGAAAATCAAAAGGAGC+TGG | + | chr3.1:58547827-58547846 | None:intergenic | 45.0% | |
| CAGCGCAGTGCATATTTCAA+GGG | + | chr3.1:58548787-58548806 | None:intergenic | 45.0% | |
| CCACAGAAAAGAAAATGGCG+GGG | - | chr3.1:58549640-58549659 | MS.gene67435:intron | 45.0% | |
| CCGAAAACACTCAATCCCTA+TGG | + | chr3.1:58545969-58545988 | None:intergenic | 45.0% | |
| CTATGTTACATTCCCAGGCA+AGG | - | chr3.1:58546385-58546404 | MS.gene67435:intron | 45.0% | |
| CTCACCTGAGTTGCCTTTAT+AGG | + | chr3.1:58546681-58546700 | None:intergenic | 45.0% | |
| CTGACACAGGACAACTATAC+AGG | + | chr3.1:58549705-58549724 | None:intergenic | 45.0% | |
| CTGCATTAGTTGGGCGATAT+GGG | - | chr3.1:58547730-58547749 | MS.gene67435:intron | 45.0% | |
| CTGTAAAAGCTTACCGGCAT+TGG | + | chr3.1:58549781-58549800 | None:intergenic | 45.0% | |
| CTGTATAGTTGTCCTGTGTC+AGG | - | chr3.1:58549703-58549722 | MS.gene67435:intron | 45.0% | |
| GGCAGATTACATCATCTCTC+TGG | - | chr3.1:58547766-58547785 | MS.gene67435:CDS | 45.0% | |
| GGCGGTGAGTTAATTAGACT+AGG | - | chr3.1:58546570-58546589 | MS.gene67435:intron | 45.0% | |
| TAGTGCTGTGGCATTTGGAA+TGG | - | chr3.1:58546981-58547000 | MS.gene67435:intron | 45.0% | |
| TCAGCATGATGTCACTAGCA+CGG | + | chr3.1:58547074-58547093 | None:intergenic | 45.0% | |
| TCATAGTCATGCTTCCGATG+AGG | + | chr3.1:58550120-58550139 | None:intergenic | 45.0% | |
| TCGAAAGGAACATAGGCACA+CGG | + | chr3.1:58547346-58547365 | None:intergenic | 45.0% | |
| TCTGCATTAGTTGGGCGATA+TGG | - | chr3.1:58547729-58547748 | MS.gene67435:intron | 45.0% | |
| TTCAAGATGCAGTCCCCAAA+AGG | + | chr3.1:58549308-58549327 | None:intergenic | 45.0% | |
| TTCAGTGGCAATGGAACTCT+TGG | - | chr3.1:58547009-58547028 | MS.gene67435:intron | 45.0% | |
| TTGTAAGGGATGCGAAAGAG+CGG | - | chr3.1:58546478-58546497 | MS.gene67435:intron | 45.0% | |
| ! | AAAGCTTACCGGCATTGGAA+TGG | + | chr3.1:58549776-58549795 | None:intergenic | 45.0% |
| ! | AAGCTTACCGGCATTGGAAT+GGG | + | chr3.1:58549775-58549794 | None:intergenic | 45.0% |
| ! | AATCCCGTTCGTTCTCCTTT+TGG | - | chr3.1:58549290-58549309 | MS.gene67435:intron | 45.0% |
| ! | AGTGCTGTGGCATTTGGAAT+GGG | - | chr3.1:58546982-58547001 | MS.gene67435:intron | 45.0% |
| ! | ATCCCGTTCGTTCTCCTTTT+GGG | - | chr3.1:58549291-58549310 | MS.gene67435:intron | 45.0% |
| ! | ATGGGTCTTTTCAGTGGCAA+TGG | - | chr3.1:58547000-58547019 | MS.gene67435:intron | 45.0% |
| ! | ATTGGTTCTCAGGTCCAAAG+GGG | - | chr3.1:58546803-58546822 | MS.gene67435:intron | 45.0% |
| ! | CGAGCATATTTTACCCCCTT+TGG | + | chr3.1:58546820-58546839 | None:intergenic | 45.0% |
| ! | GCTCCAAAGGTTTTTCCTTC+TGG | + | chr3.1:58549606-58549625 | None:intergenic | 45.0% |
| ! | GTGTAGTCTTTTCAGCCCAT+CGG | - | chr3.1:58547974-58547993 | MS.gene67435:intron | 45.0% |
| !! | ACATTGGTTCTCAGGTCCAA+AGG | - | chr3.1:58546801-58546820 | MS.gene67435:intron | 45.0% |
| !! | CATTGGTTCTCAGGTCCAAA+GGG | - | chr3.1:58546802-58546821 | MS.gene67435:intron | 45.0% |
| !! | CGCCATTTTCTTTTCTGTGG+AGG | + | chr3.1:58549640-58549659 | None:intergenic | 45.0% |
| !! | CTTGGAGGCGTTTATTCTGA+AGG | - | chr3.1:58548381-58548400 | MS.gene67435:intron | 45.0% |
| !! | GACTACAAAAGTACCTCCGA+TGG | + | chr3.1:58547993-58548012 | None:intergenic | 45.0% |
| !! | TGGTGCTATGTTACATTCCC+AGG | - | chr3.1:58546380-58546399 | MS.gene67435:intron | 45.0% |
| !!! | CTTGCTTTTTCAAAGCTGCC+AGG | + | chr3.1:58549395-58549414 | None:intergenic | 45.0% |
| !!! | CTTTTAGCTTTGCCTGACAC+AGG | + | chr3.1:58549718-58549737 | None:intergenic | 45.0% |
| AGCAAGAGCTGAAGTCCTCA+CGG | - | chr3.1:58550157-58550176 | MS.gene67435:CDS | 50.0% | |
| CCAGCGCAGTGCATATTTCA+AGG | + | chr3.1:58548788-58548807 | None:intergenic | 50.0% | |
| CCTTGAAATATGCACTGCGC+TGG | - | chr3.1:58548785-58548804 | MS.gene67435:intron | 50.0% | |
| CCTTGGCATGGAAGGCTTAA+GGG | - | chr3.1:58546549-58546568 | MS.gene67435:intron | 50.0% | |
| CGAAAGGAACATAGGCACAC+GGG | + | chr3.1:58547345-58547364 | None:intergenic | 50.0% | |
| GGAAATCTCCTTGGCATGGA+AGG | - | chr3.1:58546541-58546560 | MS.gene67435:intron | 50.0% | |
| GGATGGAAATCTCCTTGGCA+TGG | - | chr3.1:58546537-58546556 | MS.gene67435:intron | 50.0% | |
| GGCAATGGAACTCTTGGAAC+TGG | - | chr3.1:58547015-58547034 | MS.gene67435:intron | 50.0% | |
| GGTTACGAGAGCAGGATTTC+AGG | - | chr3.1:58547649-58547668 | MS.gene67435:intron | 50.0% | |
| GGTTGTCACCTTTCGCTAGT+GGG | + | chr3.1:58550215-58550234 | None:intergenic | 50.0% | |
| GTCCCATTCTCATGTCTGCT+TGG | - | chr3.1:58549443-58549462 | MS.gene67435:intron | 50.0% | |
| GTCCCCAAAAGGAGAACGAA+CGG | + | chr3.1:58549297-58549316 | None:intergenic | 50.0% | |
| GTTACCAGCAAAAGGAGCCA+CGG | + | chr3.1:58549671-58549690 | None:intergenic | 50.0% | |
| TAGGGAGAGAAACCTGGACA+CGG | + | chr3.1:58545394-58545413 | None:intergenic | 50.0% | |
| TCAGCTAGTGCTGTGGCATT+TGG | - | chr3.1:58546976-58546995 | MS.gene67435:intron | 50.0% | |
| TCCCCAAAAGGAGAACGAAC+GGG | + | chr3.1:58549296-58549315 | None:intergenic | 50.0% | |
| TCCTTGGCATGGAAGGCTTA+AGG | - | chr3.1:58546548-58546567 | MS.gene67435:intron | 50.0% | |
| TGAACACCCCATTCCAATGC+CGG | - | chr3.1:58549765-58549784 | MS.gene67435:intron | 50.0% | |
| TGTCTGTCTTACCGTTGCGA+TGG | - | chr3.1:58547403-58547422 | MS.gene67435:intron | 50.0% | |
| TTACATTCCCAGGCAAGGCA+TGG | - | chr3.1:58546390-58546409 | MS.gene67435:intron | 50.0% | |
| ! | AGCTTACCGGCATTGGAATG+GGG | + | chr3.1:58549774-58549793 | None:intergenic | 50.0% |
| ! | CACGGGCTTCAACATTTTCC+AGG | + | chr3.1:58547328-58547347 | None:intergenic | 50.0% |
| ! | CTTTGGAGAGAGTTCCGTCT+TGG | - | chr3.1:58546508-58546527 | MS.gene67435:intron | 50.0% |
| ! | TAGTCTTTTCAGCCCATCGG+AGG | - | chr3.1:58547977-58547996 | MS.gene67435:intron | 50.0% |
| ! | TCCCGTTCGTTCTCCTTTTG+GGG | - | chr3.1:58549292-58549311 | MS.gene67435:intron | 50.0% |
| ! | TGGCTTTTCCCACTAGCGAA+AGG | - | chr3.1:58550204-58550223 | MS.gene67435:CDS | 50.0% |
| ! | TTGGTTCTCAGGTCCAAAGG+GGG | - | chr3.1:58546804-58546823 | MS.gene67435:intron | 50.0% |
| !! | CCCCGCCATTTTCTTTTCTG+TGG | + | chr3.1:58549643-58549662 | None:intergenic | 50.0% |
| !! | CTTTTCTGTGGAGGCTTTGG+AGG | + | chr3.1:58549631-58549650 | None:intergenic | 50.0% |
| AACATCTCTCCACCGTGTCC+AGG | - | chr3.1:58545379-58545398 | MS.gene67435:CDS | 55.0% | |
| AACGAGTTCCATGCCTTGCC+TGG | + | chr3.1:58546401-58546420 | None:intergenic | 55.0% | |
| ACAGCACTAGCTGATGCTCG+GGG | + | chr3.1:58546970-58546989 | None:intergenic | 55.0% | |
| ACGAGTTCCATGCCTTGCCT+GGG | + | chr3.1:58546400-58546419 | None:intergenic | 55.0% | |
| CACAGCACTAGCTGATGCTC+GGG | + | chr3.1:58546971-58546990 | None:intergenic | 55.0% | |
| CACGTGCTACCATTTCTGCC+TGG | - | chr3.1:58547307-58547326 | MS.gene67435:intron | 55.0% | |
| CCACAGCACTAGCTGATGCT+CGG | + | chr3.1:58546972-58546991 | None:intergenic | 55.0% | |
| CCCTTAAGCCTTCCATGCCA+AGG | + | chr3.1:58546552-58546571 | None:intergenic | 55.0% | |
| GCTGGAGTGGACAGATGACT+TGG | - | chr3.1:58548363-58548382 | MS.gene67435:intron | 55.0% | |
| GGGTTGTCACCTTTCGCTAG+TGG | + | chr3.1:58550216-58550235 | None:intergenic | 55.0% | |
| TAGTCACCGAAGGCTCTCCT+GGG | + | chr3.1:58546141-58546160 | None:intergenic | 55.0% | |
| TGGCATGGAAGGCTTAAGGG+CGG | - | chr3.1:58546552-58546571 | MS.gene67435:intron | 55.0% | |
| ! | CCTTTTCCCAGGAGAGCCTT+CGG | - | chr3.1:58546132-58546151 | MS.gene67435:CDS | 55.0% |
| ! | GGAGTGGACAGATGACTTGG+AGG | - | chr3.1:58548366-58548385 | MS.gene67435:intron | 55.0% |
| !! | GGCTTTGGAGGTAGCTCCAA+AGG | + | chr3.1:58549619-58549638 | None:intergenic | 55.0% |
| CCGAAGGCTCTCCTGGGAAA+AGG | + | chr3.1:58546135-58546154 | None:intergenic | 60.0% | |
| CCGAGCATCAGCTAGTGCTG+TGG | - | chr3.1:58546969-58546988 | MS.gene67435:intron | 60.0% | |
| CTAGTCACCGAAGGCTCTCC+TGG | + | chr3.1:58546142-58546161 | None:intergenic | 60.0% | |
| GGAGAGAAACCTGGACACGG+TGG | + | chr3.1:58545391-58545410 | None:intergenic | 60.0% | |
| ! | AGCACCGTGGCTCCTTTTGC+TGG | - | chr3.1:58549664-58549683 | MS.gene67435:intron | 60.0% |
| ! | AAAATGGCGGGGCAGCACCG+TGG | - | chr3.1:58549651-58549670 | MS.gene67435:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 58545288 | 58550251 | 58545288 | ID=MS.gene67435 |
| chr3.1 | mRNA | 58545288 | 58550251 | 58545288 | ID=MS.gene67435.t1;Parent=MS.gene67435 |
| chr3.1 | exon | 58550139 | 58550251 | 58550139 | ID=MS.gene67435.t1.exon1;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58550139 | 58550251 | 58550139 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58549954 | 58550041 | 58549954 | ID=MS.gene67435.t1.exon2;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58549954 | 58550041 | 58549954 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58548844 | 58549137 | 58548844 | ID=MS.gene67435.t1.exon3;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58548844 | 58549137 | 58548844 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58548417 | 58548575 | 58548417 | ID=MS.gene67435.t1.exon4;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58548417 | 58548575 | 58548417 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58547736 | 58547876 | 58547736 | ID=MS.gene67435.t1.exon5;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58547736 | 58547876 | 58547736 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58547541 | 58547597 | 58547541 | ID=MS.gene67435.t1.exon6;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58547541 | 58547597 | 58547541 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58547046 | 58547184 | 58547046 | ID=MS.gene67435.t1.exon7;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58547046 | 58547184 | 58547046 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58546054 | 58546158 | 58546054 | ID=MS.gene67435.t1.exon8;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58546054 | 58546158 | 58546054 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58545753 | 58545949 | 58545753 | ID=MS.gene67435.t1.exon9;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58545753 | 58545949 | 58545753 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58545545 | 58545586 | 58545545 | ID=MS.gene67435.t1.exon10;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58545545 | 58545586 | 58545545 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| chr3.1 | exon | 58545288 | 58545437 | 58545288 | ID=MS.gene67435.t1.exon11;Parent=MS.gene67435.t1 |
| chr3.1 | CDS | 58545288 | 58545437 | 58545288 | ID=cds.MS.gene67435.t1;Parent=MS.gene67435.t1 |
| Gene Sequence |
| Protein sequence |
