Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67814.t1 | XP_013467901.1 | 47.8 | 540 | 211 | 17 | 8 | 487 | 27 | 555 | 8.10E-100 | 374.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67814.t1 | Q9FLH8 | 57.4 | 310 | 110 | 6 | 195 | 485 | 23 | 329 | 2.5e-81 | 304.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67814.t1 | A0A072VKK1 | 47.8 | 540 | 211 | 17 | 8 | 487 | 27 | 555 | 5.9e-100 | 374.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene67814 | 0.800987 | 1.11E-48 | -1.69E-46 |
| MS.gene053154 | MS.gene67814 | 0.81834 | 2.06E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67814.t1 | MTR_1g101950 | 63.253 | 332 | 98 | 8 | 175 | 487 | 5 | 331 | 6.64e-125 | 368 |
| MS.gene67814.t1 | MTR_1g057810 | 47.874 | 541 | 209 | 19 | 8 | 487 | 27 | 555 | 6.67e-124 | 373 |
| MS.gene67814.t1 | MTR_1g105150 | 45.656 | 541 | 207 | 20 | 8 | 487 | 27 | 541 | 1.38e-111 | 341 |
| MS.gene67814.t1 | MTR_6g089480 | 61.438 | 306 | 96 | 6 | 203 | 489 | 2 | 304 | 5.32e-111 | 332 |
| MS.gene67814.t1 | MTR_1g069490 | 47.877 | 424 | 141 | 10 | 109 | 487 | 4 | 392 | 3.50e-104 | 317 |
| MS.gene67814.t1 | MTR_6g089480 | 63.273 | 275 | 83 | 5 | 203 | 462 | 2 | 273 | 8.51e-103 | 309 |
| MS.gene67814.t1 | MTR_6g089480 | 63.603 | 272 | 81 | 5 | 203 | 459 | 2 | 270 | 6.41e-102 | 306 |
| MS.gene67814.t1 | MTR_1g069745 | 59.441 | 286 | 92 | 7 | 216 | 487 | 4 | 279 | 3.46e-95 | 290 |
| MS.gene67814.t1 | MTR_5g079460 | 54.769 | 325 | 124 | 7 | 183 | 488 | 55 | 375 | 1.55e-92 | 286 |
| MS.gene67814.t1 | MTR_2g098950 | 49.032 | 310 | 138 | 6 | 193 | 485 | 12 | 318 | 9.46e-83 | 259 |
| MS.gene67814.t1 | MTR_4g067310 | 49.032 | 310 | 138 | 6 | 193 | 485 | 13 | 319 | 2.76e-82 | 258 |
| MS.gene67814.t1 | MTR_1g076850 | 47.267 | 311 | 138 | 6 | 195 | 485 | 8 | 312 | 5.14e-79 | 249 |
| MS.gene67814.t1 | MTR_7g075860 | 46.815 | 314 | 143 | 7 | 195 | 487 | 41 | 351 | 8.95e-75 | 240 |
| MS.gene67814.t1 | MTR_1g054730 | 45.020 | 251 | 106 | 8 | 245 | 487 | 155 | 381 | 8.43e-45 | 162 |
| MS.gene67814.t1 | MTR_0046s0180 | 63.830 | 94 | 30 | 1 | 398 | 487 | 10 | 103 | 1.01e-30 | 115 |
| MS.gene67814.t1 | MTR_8g096570 | 43.949 | 157 | 72 | 3 | 23 | 163 | 76 | 232 | 2.07e-28 | 119 |
| MS.gene67814.t1 | MTR_1g071270 | 51.648 | 91 | 24 | 2 | 104 | 174 | 31 | 121 | 2.02e-16 | 77.4 |
| MS.gene67814.t1 | MTR_0046s0210 | 40.373 | 161 | 37 | 6 | 139 | 248 | 1 | 153 | 4.61e-15 | 73.2 |
| MS.gene67814.t1 | MTR_1g069480 | 41.228 | 114 | 46 | 6 | 52 | 145 | 4 | 116 | 4.95e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67814.t1 | AT5G51830 | 57.419 | 310 | 110 | 6 | 195 | 485 | 23 | 329 | 3.49e-104 | 315 |
| MS.gene67814.t1 | AT5G51830 | 57.419 | 310 | 110 | 6 | 195 | 485 | 23 | 329 | 3.49e-104 | 315 |
| MS.gene67814.t1 | AT1G66430 | 54.037 | 322 | 125 | 7 | 187 | 489 | 57 | 374 | 2.75e-97 | 299 |
| MS.gene67814.t1 | AT1G06030 | 47.335 | 319 | 138 | 6 | 188 | 485 | 6 | 315 | 5.01e-82 | 258 |
| MS.gene67814.t1 | AT2G31390 | 46.855 | 318 | 141 | 5 | 189 | 485 | 3 | 313 | 1.56e-81 | 256 |
| MS.gene67814.t1 | AT4G10260 | 48.065 | 310 | 137 | 7 | 195 | 485 | 6 | 310 | 6.21e-79 | 249 |
| MS.gene67814.t1 | AT1G06020 | 45.687 | 313 | 142 | 5 | 194 | 485 | 9 | 314 | 7.28e-79 | 250 |
| MS.gene67814.t1 | AT3G59480 | 47.022 | 319 | 145 | 8 | 186 | 485 | 1 | 314 | 4.27e-78 | 247 |
| MS.gene67814.t1 | AT5G63540 | 40.491 | 163 | 81 | 4 | 17 | 163 | 98 | 260 | 1.52e-23 | 104 |
| MS.gene67814.t1 | AT5G63540 | 40.491 | 163 | 81 | 4 | 17 | 163 | 98 | 260 | 1.61e-23 | 104 |
| MS.gene67814.t1 | AT1G50390 | 36.986 | 146 | 71 | 5 | 344 | 485 | 3 | 131 | 1.15e-16 | 77.4 |
| MS.gene67814.t1 | AT1G69200 | 24.138 | 319 | 190 | 11 | 195 | 465 | 206 | 520 | 5.46e-15 | 78.2 |
Find 116 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAGATTTGCGCCATTT+TGG | 0.212843 | 3.3:-2197180 | None:intergenic |
| ACTTTCAAGAAAGCTCTTTC+TGG | 0.215190 | 3.3:+2198329 | MS.gene67814:CDS |
| CTGATAGGGTTCTCCAACTC+TGG | 0.227406 | 3.3:+2197129 | MS.gene67814:CDS |
| CATATGATCTCTAGGATTTC+GGG | 0.249052 | 3.3:-2199020 | None:intergenic |
| CCTGAAAATATTATAGTATT+GGG | 0.251478 | 3.3:+2197771 | MS.gene67814:CDS |
| GTGAAACGTTGATAGATTTC+CGG | 0.258185 | 3.3:+2198270 | MS.gene67814:CDS |
| CAGGCTAAAATATTCCATTA+TGG | 0.292003 | 3.3:+2199172 | MS.gene67814:intron |
| GCATATGATCTCTAGGATTT+CGG | 0.292748 | 3.3:-2199021 | None:intergenic |
| CCTTGATCGCGCCACGTATA+TGG | 0.297920 | 3.3:-2200628 | None:intergenic |
| TTGTGCGCCTCCTGGATTAA+AGG | 0.303460 | 3.3:+2197617 | MS.gene67814:CDS |
| TAGGTTGGAGCAGATGAATT+TGG | 0.306305 | 3.3:+2198860 | MS.gene67814:intron |
| CAATTAGAAGCTTGTGATTA+GGG | 0.307440 | 3.3:-2199566 | None:intergenic |
| CGATGGTCCCTTCATATTAC+AGG | 0.311149 | 3.3:+2197286 | MS.gene67814:CDS |
| TCCTAGAGATCATATGCTTC+TGG | 0.311778 | 3.3:+2199027 | MS.gene67814:CDS |
| AGGTTGGAGCAGATGAATTT+GGG | 0.318393 | 3.3:+2198861 | MS.gene67814:intron |
| ACAATTAGAAGCTTGTGATT+AGG | 0.324413 | 3.3:-2199567 | None:intergenic |
| CTTGATGTTTGTGCGCCTCC+TGG | 0.325990 | 3.3:+2197609 | MS.gene67814:CDS |
| GTCCATGAAATTAGAAAATT+CGG | 0.332161 | 3.3:+2197510 | MS.gene67814:CDS |
| GGCAGTTGGCATCTCTAAGC+TGG | 0.347511 | 3.3:+2198364 | MS.gene67814:CDS |
| TTTGCTACACTTGGAGTTGA+TGG | 0.354409 | 3.3:+2198968 | MS.gene67814:CDS |
| TTATAATTCAAGAACCATAT+TGG | 0.361067 | 3.3:+2198943 | MS.gene67814:CDS |
| AGTGGACTGGTTGTTTGTTT+TGG | 0.362156 | 3.3:+2198248 | MS.gene67814:CDS |
| CATCACAGAAACCTCCAATT+TGG | 0.367988 | 3.3:-2200399 | None:intergenic |
| CCTATATTGCATCAGATTGC+AGG | 0.368213 | 3.3:-2200686 | None:intergenic |
| AAGTGTAGCAAAAGCCAATA+TGG | 0.375805 | 3.3:-2198957 | None:intergenic |
| TCCTGAAAATATTATAGTAT+TGG | 0.381415 | 3.3:+2197770 | MS.gene67814:CDS |
| CATCGGTCAATTTGAACTTC+AGG | 0.386363 | 3.3:-2197542 | None:intergenic |
| AGACTACGATGTCTCCAAAA+TGG | 0.388919 | 3.3:+2197166 | MS.gene67814:CDS |
| CAAAATGGCGCAAATCTGTT+TGG | 0.395582 | 3.3:+2197181 | MS.gene67814:CDS |
| TCAAACTGATGGAACCATAA+TGG | 0.399197 | 3.3:-2199186 | None:intergenic |
| AGAGAGACGAGGTTGCTGAT+AGG | 0.408330 | 3.3:+2197114 | MS.gene67814:CDS |
| CAAAATGATATTGATATGTC+TGG | 0.421489 | 3.3:+2198908 | MS.gene67814:CDS |
| CTTGATCGCGCCACGTATAT+GGG | 0.426911 | 3.3:-2200627 | None:intergenic |
| TGATGATGTTGCTGTATTCC+AGG | 0.427039 | 3.3:+2199533 | MS.gene67814:CDS |
| CGACGTTGAGTCACTGTGAC+TGG | 0.428117 | 3.3:-2197814 | None:intergenic |
| TTGTGCACATGTTCATTAAG+AGG | 0.432199 | 3.3:-2197254 | None:intergenic |
| ACACTCTACCCACTCTTTGC+CGG | 0.434153 | 3.3:-2198289 | None:intergenic |
| ACTTACCTAGGTTGCTTGGC+TGG | 0.437361 | 3.3:-2197851 | None:intergenic |
| GTTGATGATGCATTTGTTAG+TGG | 0.439175 | 3.3:+2200442 | MS.gene67814:CDS |
| TGAATTACCTGGAAAATACT+TGG | 0.448299 | 3.3:-2200490 | None:intergenic |
| ATTAGAAAATTCGGTAATCA+AGG | 0.454842 | 3.3:+2197519 | MS.gene67814:CDS |
| GGAAAAGAGGCAAAAGCAAA+AGG | 0.454997 | 3.3:+2197030 | MS.gene67814:CDS |
| GAGAGACGAGGTTGCTGATA+GGG | 0.460339 | 3.3:+2197115 | MS.gene67814:CDS |
| GCAGTTGGCATCTCTAAGCT+GGG | 0.467387 | 3.3:+2198365 | MS.gene67814:CDS |
| TTGAGGATTGCTAAAGAGTC+CGG | 0.477772 | 3.3:+2199244 | MS.gene67814:CDS |
| TTGATGATGCATTTGTTAGT+GGG | 0.479441 | 3.3:+2200443 | MS.gene67814:CDS |
| GATCTCAATTCTTGTGGTAC+CGG | 0.484795 | 3.3:+2197221 | MS.gene67814:CDS |
| AACGGTGAGACGTGGAAGAT+TGG | 0.484932 | 3.3:+2197740 | MS.gene67814:CDS |
| GAAACCTACCTGTAATATGA+AGG | 0.485830 | 3.3:-2197294 | None:intergenic |
| GAAGAGAGACAGAGCAATCT+CGG | 0.491901 | 3.3:+2197052 | MS.gene67814:CDS |
| GATGAGCGTGTTGACATAAC+TGG | 0.492096 | 3.3:+2200418 | MS.gene67814:CDS |
| CAAACATCAAGGTCAGCAAC+AGG | 0.497863 | 3.3:-2197597 | None:intergenic |
| TGATAGGGTTCTCCAACTCT+GGG | 0.504669 | 3.3:+2197130 | MS.gene67814:CDS |
| CCATATACGTGGCGCGATCA+AGG | 0.507873 | 3.3:+2200628 | MS.gene67814:CDS |
| ATCATACGAGAGAATGCAAC+CGG | 0.511015 | 3.3:-2199263 | None:intergenic |
| GAAAGAGCTTTCTTGAAAGT+AGG | 0.514916 | 3.3:-2198326 | None:intergenic |
| TTTGAAATGAATCCCAGAGT+TGG | 0.517994 | 3.3:-2197142 | None:intergenic |
| TTTCAAAAGCTCACGGGTGA+CGG | 0.519480 | 3.3:-2197075 | None:intergenic |
| CACGGAAGGGAAAAGATGAC+AGG | 0.519724 | 3.3:+2197008 | None:intergenic |
| GCAGATCAGTGCAGTTGAGT+TGG | 0.520437 | 3.3:+2199488 | MS.gene67814:CDS |
| CTGAAAATATTATAGTATTG+GGG | 0.525050 | 3.3:+2197772 | MS.gene67814:CDS |
| ATTGTCACTGAAGGTTCAAA+CGG | 0.526786 | 3.3:+2199585 | MS.gene67814:CDS |
| GAAAAGATGACAGGGAAAAG+AGG | 0.529894 | 3.3:+2197017 | None:intergenic |
| TTTGACTGTTTGAACACCAT+CGG | 0.530622 | 3.3:-2197559 | None:intergenic |
| AAGGACTTACCTAGGTTGCT+TGG | 0.532976 | 3.3:-2197855 | None:intergenic |
| CAGTTGGCATCTCTAAGCTG+GGG | 0.533061 | 3.3:+2198366 | MS.gene67814:CDS |
| ACTCTCCAGCCAAGCAACCT+AGG | 0.533860 | 3.3:+2197846 | MS.gene67814:CDS |
| TCCAGAAGCATATGATCTCT+AGG | 0.538632 | 3.3:-2199028 | None:intergenic |
| GATAGATTTCCGGCAAAGAG+TGG | 0.546022 | 3.3:+2198280 | MS.gene67814:CDS |
| TGGCTCATCAATCAAACTGA+TGG | 0.547967 | 3.3:-2199197 | None:intergenic |
| TTAAAGGCACCTTCTTGATG+AGG | 0.548253 | 3.3:-2199072 | None:intergenic |
| AACGAAGAAACCTTTAATCC+AGG | 0.549242 | 3.3:-2197627 | None:intergenic |
| AGTTGGCATCTCTAAGCTGG+GGG | 0.550542 | 3.3:+2198367 | MS.gene67814:CDS |
| GTACGATGAGCCGACTTGCA+TGG | 0.553544 | 3.3:-2199217 | None:intergenic |
| TCTTCCGATCTCAATTCTTG+TGG | 0.554279 | 3.3:+2197215 | MS.gene67814:CDS |
| GATTAGGGCGTAAAAGCTCC+TGG | 0.555038 | 3.3:-2199551 | None:intergenic |
| ACCCGAGTTTCAAAAGCTCA+CGG | 0.569058 | 3.3:-2197082 | None:intergenic |
| CAGGAGGCGCACAAACATCA+AGG | 0.575331 | 3.3:-2197608 | None:intergenic |
| TCTTTCTGGTGCTGCAAACG+TGG | 0.577793 | 3.3:+2198343 | MS.gene67814:CDS |
| TGAAAATATTATAGTATTGG+GGG | 0.578622 | 3.3:+2197773 | MS.gene67814:CDS |
| GAATTACCTGGAAAATACTT+GGG | 0.585959 | 3.3:-2200489 | None:intergenic |
| GGTCAAAATCTCTAATGTAA+CGG | 0.586449 | 3.3:+2197722 | MS.gene67814:intron |
| CTGCAACAAAACAAGTGGAC+TGG | 0.587776 | 3.3:+2198235 | MS.gene67814:CDS |
| CCCGAGTTTCAAAAGCTCAC+GGG | 0.588439 | 3.3:-2197081 | None:intergenic |
| GGGCGGAATATAACGCTGCA+TGG | 0.591051 | 3.3:-2200607 | None:intergenic |
| AAGCTTCTAATTGTCACTGA+AGG | 0.591245 | 3.3:+2199576 | MS.gene67814:CDS |
| GACGTTGAGTCACTGTGACT+GGG | 0.594517 | 3.3:-2197813 | None:intergenic |
| GATGGTGTTCAAACAGTCAA+AGG | 0.597057 | 3.3:+2197561 | MS.gene67814:CDS |
| TGATCATAACCTCATCAAGA+AGG | 0.598780 | 3.3:+2199063 | MS.gene67814:CDS |
| AGATGAATTTGGGTATATGT+TGG | 0.599101 | 3.3:+2198871 | MS.gene67814:CDS |
| TTTCTTGAAAGTAGGCACTT+CGG | 0.599332 | 3.3:-2198318 | None:intergenic |
| TTCATCTGCAGTTATAAGCA+AGG | 0.602376 | 3.3:+2198391 | MS.gene67814:CDS |
| GAAGGCTGCAACAAAACAAG+TGG | 0.603837 | 3.3:+2198230 | MS.gene67814:intron |
| ATAGATTTCCGGCAAAGAGT+GGG | 0.603860 | 3.3:+2198281 | MS.gene67814:CDS |
| AAACCTACCTGTAATATGAA+GGG | 0.605332 | 3.3:-2197293 | None:intergenic |
| TTATATTCCGCCCATATACG+TGG | 0.610898 | 3.3:+2200617 | MS.gene67814:CDS |
| CGGCTCATCGTACTGCCTTG+AGG | 0.612068 | 3.3:+2199227 | MS.gene67814:CDS |
| TGCACATGTTCATTAAGAGG+AGG | 0.615105 | 3.3:-2197251 | None:intergenic |
| CTGAAGTTCAAATTGACCGA+TGG | 0.623080 | 3.3:+2197543 | MS.gene67814:CDS |
| GGTGCTGCAAACGTGGCAGT+TGG | 0.623402 | 3.3:+2198350 | MS.gene67814:CDS |
| TCAAACAGTCAAAGGAGTAG+TGG | 0.631978 | 3.3:+2197569 | MS.gene67814:CDS |
| GAAAATATTATAGTATTGGG+GGG | 0.643157 | 3.3:+2197774 | MS.gene67814:CDS |
| GGACTCTTTAGCAATCCTCA+AGG | 0.645080 | 3.3:-2199242 | None:intergenic |
| GATTGATGAGCCATGCAAGT+CGG | 0.649771 | 3.3:+2199207 | MS.gene67814:CDS |
| GTGCACAAAACTACTCTCGA+TGG | 0.652622 | 3.3:+2197269 | MS.gene67814:CDS |
| TCTAATGTAACGGTGAGACG+TGG | 0.656398 | 3.3:+2197732 | MS.gene67814:CDS |
| GTTGGCATCTCTAAGCTGGG+GGG | 0.656864 | 3.3:+2198368 | MS.gene67814:CDS |
| GGTACCACAAGAATTGAGAT+CGG | 0.666538 | 3.3:-2197219 | None:intergenic |
| AATAACACTTCAGACAGACT+CGG | 0.667343 | 3.3:-2199453 | None:intergenic |
| ACGGAAGGGAAAAGATGACA+GGG | 0.668784 | 3.3:+2197009 | None:intergenic |
| GTTTGCTTTGAAGAGAGACG+AGG | 0.686169 | 3.3:+2197103 | MS.gene67814:CDS |
| GATCGCGCCACGTATATGGG+CGG | 0.701621 | 3.3:-2200624 | None:intergenic |
| ATTAAGAGGAGGCAGTACAC+CGG | 0.703216 | 3.3:-2197240 | None:intergenic |
| AATACAGCAACATCATCATG+AGG | 0.706572 | 3.3:-2199528 | None:intergenic |
| GAAGAAACCTTTAATCCAGG+AGG | 0.736016 | 3.3:-2197624 | None:intergenic |
| ATATTGATATGTCTGGCATG+CGG | 0.758304 | 3.3:+2198915 | MS.gene67814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTAATTTTATTATTA+CGG | + | chr3.3:2197336-2197355 | MS.gene67814:intron | 0.0% |
| !! | AAAGATAATAATTTAATAAG+TGG | + | chr3.3:2197911-2197930 | MS.gene67814:intron | 10.0% |
| !! | AAGATAATAATTTAATAAGT+GGG | + | chr3.3:2197912-2197931 | MS.gene67814:intron | 10.0% |
| !! | TTAATTTAACAATAAGAAAA+GGG | - | chr3.3:2198755-2198774 | None:intergenic | 10.0% |
| !! | TTTCTTATTGTTAAATTAAA+GGG | + | chr3.3:2198756-2198775 | MS.gene67814:intron | 10.0% |
| !!! | ATAAAAAAGCAAAATAATTT+TGG | - | chr3.3:2199957-2199976 | None:intergenic | 10.0% |
| !!! | ATTACAACAAATTTTAAAAA+TGG | - | chr3.3:2200204-2200223 | None:intergenic | 10.0% |
| !!! | TTTAATTTAACAATAAGAAA+AGG | - | chr3.3:2198756-2198775 | None:intergenic | 10.0% |
| !!! | TTTTCTTATTGTTAAATTAA+AGG | + | chr3.3:2198755-2198774 | MS.gene67814:intron | 10.0% |
| !! | ATATATGTATTAAGATGAAA+AGG | - | chr3.3:2197665-2197684 | None:intergenic | 15.0% |
| !! | AAAATTTACCTTAATGACAT+TGG | - | chr3.3:2199362-2199381 | None:intergenic | 20.0% |
| !! | CCTGAAAATATTATAGTATT+GGG | + | chr3.3:2197771-2197790 | MS.gene67814:CDS | 20.0% |
| !! | CTAATTAGCATAACTTAATA+AGG | + | chr3.3:2198130-2198149 | MS.gene67814:intron | 20.0% |
| !! | CTGAAAATATTATAGTATTG+GGG | + | chr3.3:2197772-2197791 | MS.gene67814:CDS | 20.0% |
| !! | TCCTGAAAATATTATAGTAT+TGG | + | chr3.3:2197770-2197789 | MS.gene67814:CDS | 20.0% |
| !! | TCGAATGTAAATTAACATAT+TGG | + | chr3.3:2199756-2199775 | MS.gene67814:intron | 20.0% |
| !! | TTATAATTCAAGAACCATAT+TGG | + | chr3.3:2198943-2198962 | MS.gene67814:CDS | 20.0% |
| !! | TTCATAATTTCTCATTCTTA+AGG | + | chr3.3:2197439-2197458 | MS.gene67814:intron | 20.0% |
| !!! | AATTTTAAAAATGGAAGGTA+CGG | - | chr3.3:2200195-2200214 | None:intergenic | 20.0% |
| !!! | CAACAAATTTTAAAAATGGA+AGG | - | chr3.3:2200200-2200219 | None:intergenic | 20.0% |
| !!! | CAGATTTTAATTGTCTAAAT+AGG | + | chr3.3:2199652-2199671 | MS.gene67814:intron | 20.0% |
| !!! | CTTTTGATGAAAATAGTAAA+GGG | + | chr3.3:2199999-2200018 | MS.gene67814:intron | 20.0% |
| !!! | TGAAAATATTATAGTATTGG+GGG | + | chr3.3:2197773-2197792 | MS.gene67814:CDS | 20.0% |
| !!! | TTTAATTTAATACTGATTGC+AGG | + | chr3.3:2199153-2199172 | MS.gene67814:intron | 20.0% |
| !!! | TTTTGAATTCAACTATAACA+TGG | - | chr3.3:2198023-2198042 | None:intergenic | 20.0% |
| !!! | TTTTGATGAAAATAGTAAAG+GGG | + | chr3.3:2200000-2200019 | MS.gene67814:intron | 20.0% |
| ! | AAATCTGAGTTAAATGACTT+TGG | - | chr3.3:2199639-2199658 | None:intergenic | 25.0% |
| ! | ACAATAAGAAAAGGGAAAAA+AGG | - | chr3.3:2198747-2198766 | None:intergenic | 25.0% |
| ! | AGATTTGAACAAATCAAACA+TGG | - | chr3.3:2198483-2198502 | None:intergenic | 25.0% |
| ! | ATAAAGAGCAAAGAAGATAA+TGG | - | chr3.3:2199701-2199720 | None:intergenic | 25.0% |
| ! | ATAAAGATATCTGAATTACC+TGG | - | chr3.3:2200504-2200523 | None:intergenic | 25.0% |
| ! | ATTAGAAAATTCGGTAATCA+AGG | + | chr3.3:2197519-2197538 | MS.gene67814:CDS | 25.0% |
| ! | ATTATACAGACTTAAACCAT+AGG | - | chr3.3:2199133-2199152 | None:intergenic | 25.0% |
| ! | ATTTCTCATTCTTAAGGAAT+AGG | + | chr3.3:2197445-2197464 | MS.gene67814:intron | 25.0% |
| ! | CAAAATGATATTGATATGTC+TGG | + | chr3.3:2198908-2198927 | MS.gene67814:CDS | 25.0% |
| ! | CATTGTAGATTTCTTAAACA+TGG | - | chr3.3:2198506-2198525 | None:intergenic | 25.0% |
| ! | CTTTATGTTATGAAGAAGTT+TGG | + | chr3.3:2198051-2198070 | MS.gene67814:intron | 25.0% |
| ! | GTCCATGAAATTAGAAAATT+CGG | + | chr3.3:2197510-2197529 | MS.gene67814:CDS | 25.0% |
| ! | TAAAATGGTTTCTATTCGAT+GGG | - | chr3.3:2198704-2198723 | None:intergenic | 25.0% |
| ! | TAAACAGAGATGGAAATTAA+AGG | - | chr3.3:2199091-2199110 | None:intergenic | 25.0% |
| ! | TAACCATGTAAGTAAACAAA+TGG | - | chr3.3:2198430-2198449 | None:intergenic | 25.0% |
| ! | TAAGAAATCTACAATGTGTT+GGG | + | chr3.3:2198510-2198529 | MS.gene67814:intron | 25.0% |
| ! | TGTTTACTTACATGGTTATT+TGG | + | chr3.3:2198432-2198451 | MS.gene67814:intron | 25.0% |
| ! | TTAAAATGGTTTCTATTCGA+TGG | - | chr3.3:2198705-2198724 | None:intergenic | 25.0% |
| ! | TTAAGAAATCTACAATGTGT+TGG | + | chr3.3:2198509-2198528 | MS.gene67814:intron | 25.0% |
| ! | TTCACAGTACTATATTTCAT+AGG | + | chr3.3:2200253-2200272 | MS.gene67814:intron | 25.0% |
| ! | TTTGATGAAAATAGTAAAGG+GGG | + | chr3.3:2200001-2200020 | MS.gene67814:intron | 25.0% |
| !! | AACTTAATAAGGATGTTTTG+TGG | + | chr3.3:2198141-2198160 | MS.gene67814:intron | 25.0% |
| !! | AAGAAGATAATGGTAATGAA+AGG | - | chr3.3:2199691-2199710 | None:intergenic | 25.0% |
| !! | ATTGATTACACTTTTCTGAA+TGG | + | chr3.3:2198542-2198561 | MS.gene67814:intron | 25.0% |
| !! | CCCAATACTATAATATTTTC+AGG | - | chr3.3:2197774-2197793 | None:intergenic | 25.0% |
| !! | GAAAATATTATAGTATTGGG+GGG | + | chr3.3:2197774-2197793 | MS.gene67814:CDS | 25.0% |
| !! | GCTTTTGATGAAAATAGTAA+AGG | + | chr3.3:2199998-2200017 | MS.gene67814:intron | 25.0% |
| !! | TACCGAATTTTCTAATTTCA+TGG | - | chr3.3:2197515-2197534 | None:intergenic | 25.0% |
| !!! | AAATTTGTTGTAATACGTAC+CGG | + | chr3.3:2200210-2200229 | MS.gene67814:intron | 25.0% |
| !!! | AATGAATTTAGTTCTGATCT+AGG | + | chr3.3:2197961-2197980 | MS.gene67814:intron | 25.0% |
| !!! | ATTTTAAAAATGGAAGGTAC+GGG | - | chr3.3:2200194-2200213 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTGCAGGATTTTA+AGG | + | chr3.3:2200375-2200394 | MS.gene67814:intron | 25.0% |
| !!! | TGATTACTAATTTTTTGTGC+AGG | + | chr3.3:2200366-2200385 | MS.gene67814:intron | 25.0% |
| !!! | TTTTTTGTGCAGGATTTTAA+GGG | + | chr3.3:2200376-2200395 | MS.gene67814:intron | 25.0% |
| AAAAGGGAAAAAAGGTAGAA+TGG | - | chr3.3:2198739-2198758 | None:intergenic | 30.0% | |
| AAAATGGTTTCTATTCGATG+GGG | - | chr3.3:2198703-2198722 | None:intergenic | 30.0% | |
| AAACCTACCTGTAATATGAA+GGG | - | chr3.3:2197296-2197315 | None:intergenic | 30.0% | |
| ACAAGTACCAATAGATTACT+CGG | - | chr3.3:2197701-2197720 | None:intergenic | 30.0% | |
| ACAATTAGAAGCTTGTGATT+AGG | - | chr3.3:2199570-2199589 | None:intergenic | 30.0% | |
| AGAAAAAAGTTGTGAGTGTT+TGG | + | chr3.3:2200543-2200562 | MS.gene67814:intron | 30.0% | |
| AGATGAATTTGGGTATATGT+TGG | + | chr3.3:2198871-2198890 | MS.gene67814:CDS | 30.0% | |
| AGTAATCTATTGGTACTTGT+AGG | + | chr3.3:2197701-2197720 | MS.gene67814:intron | 30.0% | |
| AGTAGTAGTGTAGTAAATCA+TGG | - | chr3.3:2197390-2197409 | None:intergenic | 30.0% | |
| CAATTAGAAGCTTGTGATTA+GGG | - | chr3.3:2199569-2199588 | None:intergenic | 30.0% | |
| CAGGCTAAAATATTCCATTA+TGG | + | chr3.3:2199172-2199191 | MS.gene67814:intron | 30.0% | |
| CAGTACTATATTTCATAGGT+AGG | + | chr3.3:2200257-2200276 | MS.gene67814:intron | 30.0% | |
| CGAAACAACCAAGTAAAAAT+GGG | - | chr3.3:2199891-2199910 | None:intergenic | 30.0% | |
| GAAAAAAGAATAACCTGCAA+TGG | - | chr3.3:2199428-2199447 | None:intergenic | 30.0% | |
| GAATTACCTGGAAAATACTT+GGG | - | chr3.3:2200492-2200511 | None:intergenic | 30.0% | |
| GGTCAAAATCTCTAATGTAA+CGG | + | chr3.3:2197722-2197741 | MS.gene67814:intron | 30.0% | |
| TAACGAATGTGAATCTATGT+TGG | + | chr3.3:2198798-2198817 | MS.gene67814:intron | 30.0% | |
| TATGATGATCTCTTAACAGA+AGG | + | chr3.3:2198212-2198231 | MS.gene67814:intron | 30.0% | |
| TGAATTACCTGGAAAATACT+TGG | - | chr3.3:2200493-2200512 | None:intergenic | 30.0% | |
| TGTCCATTTGTTTACTTACA+TGG | + | chr3.3:2198424-2198443 | MS.gene67814:intron | 30.0% | |
| ! | AAAGGGTATAATGAGCATAT+GGG | + | chr3.3:2199330-2199349 | MS.gene67814:intron | 30.0% |
| ! | AGATAATGGTAATGAAAGGA+AGG | - | chr3.3:2199687-2199706 | None:intergenic | 30.0% |
| ! | ATCAGCTAATCTAGAACATA+AGG | - | chr3.3:2197877-2197896 | None:intergenic | 30.0% |
| ! | CTTCTTACCATATGTGTTTT+AGG | + | chr3.3:2198841-2198860 | MS.gene67814:intron | 30.0% |
| ! | TATGATCCGAATTTGAGATT+GGG | + | chr3.3:2199280-2199299 | MS.gene67814:intron | 30.0% |
| !! | GTTGATGAAGTTATTTTGTG+TGG | + | chr3.3:2200567-2200586 | MS.gene67814:intron | 30.0% |
| !! | TTACCATATGTGTTTTAGGT+TGG | + | chr3.3:2198845-2198864 | MS.gene67814:intron | 30.0% |
| !! | TTGATGATGCATTTGTTAGT+GGG | + | chr3.3:2200443-2200462 | MS.gene67814:CDS | 30.0% |
| !!! | TGGTTGGTTAGGTTTTAAAA+TGG | - | chr3.3:2198719-2198738 | None:intergenic | 30.0% |
| AACGAAGAAACCTTTAATCC+AGG | - | chr3.3:2197630-2197649 | None:intergenic | 35.0% | |
| AAGATGAAAAGGATGTCTAC+TGG | - | chr3.3:2197654-2197673 | None:intergenic | 35.0% | |
| AAGCTTCTAATTGTCACTGA+AGG | + | chr3.3:2199576-2199595 | MS.gene67814:CDS | 35.0% | |
| AAGTAAAAATGGGTACGGTT+CGG | - | chr3.3:2199881-2199900 | None:intergenic | 35.0% | |
| AAGTGTAGCAAAAGCCAATA+TGG | - | chr3.3:2198960-2198979 | None:intergenic | 35.0% | |
| AATAACACTTCAGACAGACT+CGG | - | chr3.3:2199456-2199475 | None:intergenic | 35.0% | |
| AATACAGCAACATCATCATG+AGG | - | chr3.3:2199531-2199550 | None:intergenic | 35.0% | |
| ACTTAAACCATAGGTCTCTA+TGG | - | chr3.3:2199124-2199143 | None:intergenic | 35.0% | |
| ACTTTCAAGAAAGCTCTTTC+TGG | + | chr3.3:2198329-2198348 | MS.gene67814:CDS | 35.0% | |
| ATATTGATATGTCTGGCATG+CGG | + | chr3.3:2198915-2198934 | MS.gene67814:CDS | 35.0% | |
| ATTCTCTCCGAGTAATCTAT+TGG | + | chr3.3:2197691-2197710 | MS.gene67814:intron | 35.0% | |
| ATTGTCACTGAAGGTTCAAA+CGG | + | chr3.3:2199585-2199604 | MS.gene67814:CDS | 35.0% | |
| CAACCAAGTAAAAATGGGTA+CGG | - | chr3.3:2199886-2199905 | None:intergenic | 35.0% | |
| CACTTTATAAATGCCATTGC+AGG | + | chr3.3:2199412-2199431 | MS.gene67814:intron | 35.0% | |
| CATAGTCCCAATCTCAAATT+CGG | - | chr3.3:2199289-2199308 | None:intergenic | 35.0% | |
| CCACAGTTTATAAACAGAGA+TGG | - | chr3.3:2199101-2199120 | None:intergenic | 35.0% | |
| CCATCTCTGTTTATAAACTG+TGG | + | chr3.3:2199098-2199117 | MS.gene67814:intron | 35.0% | |
| CTGATATAGATCAAATGCAC+TGG | + | chr3.3:2197484-2197503 | MS.gene67814:intron | 35.0% | |
| GAAACCTACCTGTAATATGA+AGG | - | chr3.3:2197297-2197316 | None:intergenic | 35.0% | |
| GAAAGAGCTTTCTTGAAAGT+AGG | - | chr3.3:2198329-2198348 | None:intergenic | 35.0% | |
| GAATGCAACATTGTCATGTT+TGG | + | chr3.3:2198623-2198642 | MS.gene67814:intron | 35.0% | |
| GCAACATTATGATAGAAGTG+TGG | + | chr3.3:2200049-2200068 | MS.gene67814:intron | 35.0% | |
| GCATGTTCTTACAACAACAA+TGG | + | chr3.3:2200118-2200137 | MS.gene67814:intron | 35.0% | |
| GCGAAACAACCAAGTAAAAA+TGG | - | chr3.3:2199892-2199911 | None:intergenic | 35.0% | |
| TAGAACATAAGGACTTACCT+AGG | - | chr3.3:2197866-2197885 | None:intergenic | 35.0% | |
| TAGGTTGTAAAACTTACGCA+AGG | + | chr3.3:2200276-2200295 | MS.gene67814:intron | 35.0% | |
| TCAAACTGATGGAACCATAA+TGG | - | chr3.3:2199189-2199208 | None:intergenic | 35.0% | |
| TGACTTTGGTAAGCTTACAT+TGG | - | chr3.3:2199625-2199644 | None:intergenic | 35.0% | |
| TGATCATAACCTCATCAAGA+AGG | + | chr3.3:2199063-2199082 | MS.gene67814:CDS | 35.0% | |
| TGGTTTCCTGTTACTATCTA+CGG | + | chr3.3:2198452-2198471 | MS.gene67814:intron | 35.0% | |
| TTCATCTGCAGTTATAAGCA+AGG | + | chr3.3:2198391-2198410 | MS.gene67814:CDS | 35.0% | |
| TTCTGATCTAGGTTATGAAC+TGG | + | chr3.3:2197972-2197991 | MS.gene67814:intron | 35.0% | |
| TTGTGCACATGTTCATTAAG+AGG | - | chr3.3:2197257-2197276 | None:intergenic | 35.0% | |
| TTTCTTGAAAGTAGGCACTT+CGG | - | chr3.3:2198321-2198340 | None:intergenic | 35.0% | |
| TTTGACTGTTTGAACACCAT+CGG | - | chr3.3:2197562-2197581 | None:intergenic | 35.0% | |
| ! | AAAAGGTAGAATGGTTGGTT+AGG | - | chr3.3:2198730-2198749 | None:intergenic | 35.0% |
| ! | AATATTATAGTATTGGGGGG+TGG | + | chr3.3:2197777-2197796 | MS.gene67814:CDS | 35.0% |
| ! | GAAAGGGTATAATGAGCATA+TGG | + | chr3.3:2199329-2199348 | MS.gene67814:intron | 35.0% |
| ! | GTATGATCCGAATTTGAGAT+TGG | + | chr3.3:2199279-2199298 | MS.gene67814:intron | 35.0% |
| ! | GTGAAACGTTGATAGATTTC+CGG | + | chr3.3:2198270-2198289 | MS.gene67814:CDS | 35.0% |
| ! | TTTGAAATGAATCCCAGAGT+TGG | - | chr3.3:2197145-2197164 | None:intergenic | 35.0% |
| !! | ATGAAGTTATTTTGTGTGGC+AGG | + | chr3.3:2200571-2200590 | MS.gene67814:intron | 35.0% |
| !! | CAATTTGCTGTAATACGTAC+CGG | - | chr3.3:2200232-2200251 | None:intergenic | 35.0% |
| !! | CATATGATCTCTAGGATTTC+GGG | - | chr3.3:2199023-2199042 | None:intergenic | 35.0% |
| !! | GCATATGATCTCTAGGATTT+CGG | - | chr3.3:2199024-2199043 | None:intergenic | 35.0% |
| !! | GTTGATGATGCATTTGTTAG+TGG | + | chr3.3:2200442-2200461 | MS.gene67814:CDS | 35.0% |
| !! | TTATGAACTGGTTTGTCTCA+TGG | + | chr3.3:2197984-2198003 | MS.gene67814:intron | 35.0% |
| !! | TTATTTTGTGTGGCAGGATA+AGG | + | chr3.3:2200577-2200596 | MS.gene67814:intron | 35.0% |
| !!! | ATATTGGCTTTTGCTACACT+TGG | + | chr3.3:2198959-2198978 | MS.gene67814:CDS | 35.0% |
| AACATTTCAGTCCACTCATC+AGG | - | chr3.3:2199724-2199743 | None:intergenic | 40.0% | |
| ACACCCAATGACGAATAGTA+GGG | + | chr3.3:2199779-2199798 | MS.gene67814:intron | 40.0% | |
| AGACTACGATGTCTCCAAAA+TGG | + | chr3.3:2197166-2197185 | MS.gene67814:CDS | 40.0% | |
| AGGTTGGAGCAGATGAATTT+GGG | + | chr3.3:2198861-2198880 | MS.gene67814:intron | 40.0% | |
| AGTACCCTACTATTCGTCAT+TGG | - | chr3.3:2199786-2199805 | None:intergenic | 40.0% | |
| ATAGATTTCCGGCAAAGAGT+GGG | + | chr3.3:2198281-2198300 | MS.gene67814:CDS | 40.0% | |
| ATCATACGAGAGAATGCAAC+CGG | - | chr3.3:2199266-2199285 | None:intergenic | 40.0% | |
| CAAAATGGCGCAAATCTGTT+TGG | + | chr3.3:2197181-2197200 | MS.gene67814:CDS | 40.0% | |
| CATCACAGAAACCTCCAATT+TGG | - | chr3.3:2200402-2200421 | None:intergenic | 40.0% | |
| CATCGGTCAATTTGAACTTC+AGG | - | chr3.3:2197545-2197564 | None:intergenic | 40.0% | |
| CTGAAGTTCAAATTGACCGA+TGG | + | chr3.3:2197543-2197562 | MS.gene67814:CDS | 40.0% | |
| GAAGAAACCTTTAATCCAGG+AGG | - | chr3.3:2197627-2197646 | None:intergenic | 40.0% | |
| GATCTCAATTCTTGTGGTAC+CGG | + | chr3.3:2197221-2197240 | MS.gene67814:CDS | 40.0% | |
| GATGGTGTTCAAACAGTCAA+AGG | + | chr3.3:2197561-2197580 | MS.gene67814:CDS | 40.0% | |
| GCTCCAACCTAAAACACATA+TGG | - | chr3.3:2198851-2198870 | None:intergenic | 40.0% | |
| GGAAAAGAGGCAAAAGCAAA+AGG | + | chr3.3:2197030-2197049 | MS.gene67814:CDS | 40.0% | |
| GGATCAAGCCAATGTCATTA+AGG | + | chr3.3:2199351-2199370 | MS.gene67814:intron | 40.0% | |
| GGGAAAAAAGGTAGAATGGT+TGG | - | chr3.3:2198735-2198754 | None:intergenic | 40.0% | |
| GGTACCACAAGAATTGAGAT+CGG | - | chr3.3:2197222-2197241 | None:intergenic | 40.0% | |
| GGTTTCCTGTTACTATCTAC+GGG | + | chr3.3:2198453-2198472 | MS.gene67814:intron | 40.0% | |
| GTACCCTACTATTCGTCATT+GGG | - | chr3.3:2199785-2199804 | None:intergenic | 40.0% | |
| GTTAAAGTTCGTGCATTTCG+AGG | + | chr3.3:2198645-2198664 | MS.gene67814:intron | 40.0% | |
| GTTGATGCAGCAAAAACACA+CGG | + | chr3.3:2199916-2199935 | MS.gene67814:intron | 40.0% | |
| GTTTCCTGTTACTATCTACG+GGG | + | chr3.3:2198454-2198473 | MS.gene67814:intron | 40.0% | |
| TAAAGGGTCATGCTAACTTG+AGG | + | chr3.3:2198772-2198791 | MS.gene67814:intron | 40.0% | |
| TCAAACAGTCAAAGGAGTAG+TGG | + | chr3.3:2197569-2197588 | MS.gene67814:CDS | 40.0% | |
| TCCTAGAGATCATATGCTTC+TGG | + | chr3.3:2199027-2199046 | MS.gene67814:CDS | 40.0% | |
| TCTTCCGATCTCAATTCTTG+TGG | + | chr3.3:2197215-2197234 | MS.gene67814:CDS | 40.0% | |
| TGCACATGTTCATTAAGAGG+AGG | - | chr3.3:2197254-2197273 | None:intergenic | 40.0% | |
| TGGCTCATCAATCAAACTGA+TGG | - | chr3.3:2199200-2199219 | None:intergenic | 40.0% | |
| TTATATTCCGCCCATATACG+TGG | + | chr3.3:2200617-2200636 | MS.gene67814:CDS | 40.0% | |
| TTGAGGATTGCTAAAGAGTC+CGG | + | chr3.3:2199244-2199263 | MS.gene67814:CDS | 40.0% | |
| TTGATGCAGCAAAAACACAC+GGG | + | chr3.3:2199917-2199936 | MS.gene67814:intron | 40.0% | |
| TTGCTCTTTATCCTGATGAG+TGG | + | chr3.3:2199710-2199729 | MS.gene67814:intron | 40.0% | |
| TTTGCTACACTTGGAGTTGA+TGG | + | chr3.3:2198968-2198987 | MS.gene67814:CDS | 40.0% | |
| ! | ATAGTAGGGTACTCCAAACA+TGG | + | chr3.3:2199793-2199812 | MS.gene67814:intron | 40.0% |
| ! | ATGTGAATCTATGTTGGCTG+CGG | + | chr3.3:2198804-2198823 | MS.gene67814:intron | 40.0% |
| ! | CAAACAGATTTGCGCCATTT+TGG | - | chr3.3:2197183-2197202 | None:intergenic | 40.0% |
| ! | CGAATTTGAGATTGGGACTA+TGG | + | chr3.3:2199287-2199306 | MS.gene67814:intron | 40.0% |
| ! | TAGGTTGGAGCAGATGAATT+TGG | + | chr3.3:2198860-2198879 | MS.gene67814:intron | 40.0% |
| ! | TATAGATCAAATGCACTGGC+AGG | + | chr3.3:2197488-2197507 | MS.gene67814:intron | 40.0% |
| ! | TCCAGAAGCATATGATCTCT+AGG | - | chr3.3:2199031-2199050 | None:intergenic | 40.0% |
| ! | TGATGATGTTGCTGTATTCC+AGG | + | chr3.3:2199533-2199552 | MS.gene67814:CDS | 40.0% |
| ! | TTCTGACCCAAGTATTTTCC+AGG | + | chr3.3:2200483-2200502 | MS.gene67814:CDS | 40.0% |
| !! | ATTCGCAAGCTCACTTTTCA+GGG | - | chr3.3:2198607-2198626 | None:intergenic | 40.0% |
| !! | CAGGATTTTAAGGGCCAAAT+TGG | + | chr3.3:2200385-2200404 | MS.gene67814:intron | 40.0% |
| !! | GAACCGTACCCATTTTTACT+TGG | + | chr3.3:2199880-2199899 | MS.gene67814:intron | 40.0% |
| !! | GATTTTAAGGGCCAAATTGG+AGG | + | chr3.3:2200388-2200407 | MS.gene67814:CDS | 40.0% |
| !! | TGATGAGTGGACTGAAATGT+TGG | + | chr3.3:2199723-2199742 | MS.gene67814:intron | 40.0% |
| !! | TTAAAGGCACCTTCTTGATG+AGG | - | chr3.3:2199075-2199094 | None:intergenic | 40.0% |
| !!! | AGTGGACTGGTTGTTTGTTT+TGG | + | chr3.3:2198248-2198267 | MS.gene67814:CDS | 40.0% |
| AAGGACTTACCTAGGTTGCT+TGG | - | chr3.3:2197858-2197877 | None:intergenic | 45.0% | |
| AATCACTGTTAGCTGACTGC+TGG | - | chr3.3:2200351-2200370 | None:intergenic | 45.0% | |
| ACCCGAGTTTCAAAAGCTCA+CGG | - | chr3.3:2197085-2197104 | None:intergenic | 45.0% | |
| ATTAAGAGGAGGCAGTACAC+CGG | - | chr3.3:2197243-2197262 | None:intergenic | 45.0% | |
| CAAACATCAAGGTCAGCAAC+AGG | - | chr3.3:2197600-2197619 | None:intergenic | 45.0% | |
| CGATGGTCCCTTCATATTAC+AGG | + | chr3.3:2197286-2197305 | MS.gene67814:CDS | 45.0% | |
| CTGCAACAAAACAAGTGGAC+TGG | + | chr3.3:2198235-2198254 | MS.gene67814:CDS | 45.0% | |
| GAAGAGAGACAGAGCAATCT+CGG | + | chr3.3:2197052-2197071 | MS.gene67814:CDS | 45.0% | |
| GAAGGCTGCAACAAAACAAG+TGG | + | chr3.3:2198230-2198249 | MS.gene67814:intron | 45.0% | |
| GACACCCAATGACGAATAGT+AGG | + | chr3.3:2199778-2199797 | MS.gene67814:intron | 45.0% | |
| GATAGATTTCCGGCAAAGAG+TGG | + | chr3.3:2198280-2198299 | MS.gene67814:CDS | 45.0% | |
| GATTGATGAGCCATGCAAGT+CGG | + | chr3.3:2199207-2199226 | MS.gene67814:CDS | 45.0% | |
| GGACTCTTTAGCAATCCTCA+AGG | - | chr3.3:2199245-2199264 | None:intergenic | 45.0% | |
| GGTCCCTTCATATTACAGGT+AGG | + | chr3.3:2197290-2197309 | MS.gene67814:intron | 45.0% | |
| GTGCACAAAACTACTCTCGA+TGG | + | chr3.3:2197269-2197288 | MS.gene67814:CDS | 45.0% | |
| TACCATACGCGTACCCAATA+CGG | - | chr3.3:2199844-2199863 | None:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | - | chr3.3:2199809-2199828 | None:intergenic | 45.0% | |
| TCTAATGTAACGGTGAGACG+TGG | + | chr3.3:2197732-2197751 | MS.gene67814:CDS | 45.0% | |
| TGATAGGGTTCTCCAACTCT+GGG | + | chr3.3:2197130-2197149 | MS.gene67814:CDS | 45.0% | |
| TTTCAAAAGCTCACGGGTGA+CGG | - | chr3.3:2197078-2197097 | None:intergenic | 45.0% | |
| ! | CATCTTTTGTAGGGTAACGC+AGG | - | chr3.3:2200662-2200681 | None:intergenic | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | chr3.3:2199804-2199823 | MS.gene67814:intron | 45.0% |
| ! | GATGAGCGTGTTGACATAAC+TGG | + | chr3.3:2200418-2200437 | MS.gene67814:CDS | 45.0% |
| ! | GCAGGACAGCATCTTTTGTA+GGG | - | chr3.3:2200671-2200690 | None:intergenic | 45.0% |
| ! | TGCAGGACAGCATCTTTTGT+AGG | - | chr3.3:2200672-2200691 | None:intergenic | 45.0% |
| !! | AAAATGGGTACGGTTCGGTA+CGG | - | chr3.3:2199876-2199895 | None:intergenic | 45.0% |
| !! | CATTCGCAAGCTCACTTTTC+AGG | - | chr3.3:2198608-2198627 | None:intergenic | 45.0% |
| !! | GAACTGGTTTGTCTCATGGT+TGG | + | chr3.3:2197988-2198007 | MS.gene67814:intron | 45.0% |
| !! | GTTTGCTTTGAAGAGAGACG+AGG | + | chr3.3:2197103-2197122 | MS.gene67814:CDS | 45.0% |
| !! | TTCGCAAGCTCACTTTTCAG+GGG | - | chr3.3:2198606-2198625 | None:intergenic | 45.0% |
| !!! | ACCCGTGAGCTTTTGAAACT+CGG | + | chr3.3:2197080-2197099 | MS.gene67814:CDS | 45.0% |
| !! | ATATTAGTAAAAAAAAAAAA+AGG | - | chr3.3:2198187-2198206 | None:intergenic | 5.0% |
| AACGGTGAGACGTGGAAGAT+TGG | + | chr3.3:2197740-2197759 | MS.gene67814:CDS | 50.0% | |
| ACACTCTACCCACTCTTTGC+CGG | - | chr3.3:2198292-2198311 | None:intergenic | 50.0% | |
| ACCATACGCGTACCCAATAC+GGG | - | chr3.3:2199843-2199862 | None:intergenic | 50.0% | |
| ACTGTGGCCATAGAGACCTA+TGG | + | chr3.3:2199114-2199133 | MS.gene67814:intron | 50.0% | |
| ACTTACCTAGGTTGCTTGGC+TGG | - | chr3.3:2197854-2197873 | None:intergenic | 50.0% | |
| AGAGAGACGAGGTTGCTGAT+AGG | + | chr3.3:2197114-2197133 | MS.gene67814:CDS | 50.0% | |
| AGTTGGCATCTCTAAGCTGG+GGG | + | chr3.3:2198367-2198386 | MS.gene67814:CDS | 50.0% | |
| ATCAGACGAGGCTGCTTGAA+AGG | + | chr3.3:2199312-2199331 | MS.gene67814:intron | 50.0% | |
| CAGTTGGCATCTCTAAGCTG+GGG | + | chr3.3:2198366-2198385 | MS.gene67814:CDS | 50.0% | |
| CCCGAGTTTCAAAAGCTCAC+GGG | - | chr3.3:2197084-2197103 | None:intergenic | 50.0% | |
| CTGATAGGGTTCTCCAACTC+TGG | + | chr3.3:2197129-2197148 | MS.gene67814:CDS | 50.0% | |
| CTTGATCGCGCCACGTATAT+GGG | - | chr3.3:2200630-2200649 | None:intergenic | 50.0% | |
| GAAGCCCCGTAGATAGTAAC+AGG | - | chr3.3:2198461-2198480 | None:intergenic | 50.0% | |
| GACGTTGAGTCACTGTGACT+GGG | - | chr3.3:2197816-2197835 | None:intergenic | 50.0% | |
| GAGAGACGAGGTTGCTGATA+GGG | + | chr3.3:2197115-2197134 | MS.gene67814:CDS | 50.0% | |
| GATTAGGGCGTAAAAGCTCC+TGG | - | chr3.3:2199554-2199573 | None:intergenic | 50.0% | |
| GCAGATCAGTGCAGTTGAGT+TGG | + | chr3.3:2199488-2199507 | MS.gene67814:CDS | 50.0% | |
| GCAGTTGGCATCTCTAAGCT+GGG | + | chr3.3:2198365-2198384 | MS.gene67814:CDS | 50.0% | |
| TCAGACGAGGCTGCTTGAAA+GGG | + | chr3.3:2199313-2199332 | MS.gene67814:intron | 50.0% | |
| TTGTGCGCCTCCTGGATTAA+AGG | + | chr3.3:2197617-2197636 | MS.gene67814:CDS | 50.0% | |
| TTTCAAGCAGCCTCGTCTGA+TGG | - | chr3.3:2199313-2199332 | None:intergenic | 50.0% | |
| ! | CTTACGCAAGGTTTGCTTCG+AGG | + | chr3.3:2200288-2200307 | MS.gene67814:intron | 50.0% |
| !! | ACATGGAGAAGTACCGGTAC+CGG | + | chr3.3:2199810-2199829 | MS.gene67814:intron | 50.0% |
| !! | TCTTTCTGGTGCTGCAAACG+TGG | + | chr3.3:2198343-2198362 | MS.gene67814:CDS | 50.0% |
| !!! | CCCGTGAGCTTTTGAAACTC+GGG | + | chr3.3:2197081-2197100 | MS.gene67814:CDS | 50.0% |
| ACTCTCCAGCCAAGCAACCT+AGG | + | chr3.3:2197846-2197865 | MS.gene67814:CDS | 55.0% | |
| CAGCAAAAACACACGGGCAG+TGG | + | chr3.3:2199923-2199942 | MS.gene67814:intron | 55.0% | |
| CCATATACGTGGCGCGATCA+AGG | + | chr3.3:2200628-2200647 | MS.gene67814:CDS | 55.0% | |
| CCTTGATCGCGCCACGTATA+TGG | - | chr3.3:2200631-2200650 | None:intergenic | 55.0% | |
| CGACGTTGAGTCACTGTGAC+TGG | - | chr3.3:2197817-2197836 | None:intergenic | 55.0% | |
| CTTGATGTTTGTGCGCCTCC+TGG | + | chr3.3:2197609-2197628 | MS.gene67814:CDS | 55.0% | |
| GGCAGTTGGCATCTCTAAGC+TGG | + | chr3.3:2198364-2198383 | MS.gene67814:CDS | 55.0% | |
| GGGCGGAATATAACGCTGCA+TGG | - | chr3.3:2200610-2200629 | None:intergenic | 55.0% | |
| GTTGGCATCTCTAAGCTGGG+GGG | + | chr3.3:2198368-2198387 | MS.gene67814:CDS | 55.0% | |
| TCCCGTATTGGGTACGCGTA+TGG | + | chr3.3:2199839-2199858 | MS.gene67814:intron | 55.0% | |
| ! | CAGGAGGCGCACAAACATCA+AGG | - | chr3.3:2197611-2197630 | None:intergenic | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | + | chr3.3:2199811-2199830 | MS.gene67814:intron | 55.0% |
| !! | GTACGATGAGCCGACTTGCA+TGG | - | chr3.3:2199220-2199239 | None:intergenic | 55.0% |
| ACCGGGTACGCTCCCGTATT+GGG | + | chr3.3:2199828-2199847 | MS.gene67814:intron | 60.0% | |
| CGGCTCATCGTACTGCCTTG+AGG | + | chr3.3:2199227-2199246 | MS.gene67814:CDS | 60.0% | |
| GATCGCGCCACGTATATGGG+CGG | - | chr3.3:2200627-2200646 | None:intergenic | 60.0% | |
| GGGACTATGGCCATCAGACG+AGG | + | chr3.3:2199300-2199319 | MS.gene67814:intron | 60.0% | |
| TACCGGGTACGCTCCCGTAT+TGG | + | chr3.3:2199827-2199846 | MS.gene67814:intron | 60.0% | |
| ! | ACCCAATACGGGAGCGTACC+CGG | - | chr3.3:2199832-2199851 | None:intergenic | 60.0% |
| ! | GGTGCTGCAAACGTGGCAGT+TGG | + | chr3.3:2198350-2198369 | MS.gene67814:CDS | 60.0% |
| ! | TACGGGAGCGTACCCGGTAC+CGG | - | chr3.3:2199826-2199845 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 2197023 | 2200697 | 2197023 | ID=MS.gene67814 |
| chr3.3 | mRNA | 2197023 | 2200697 | 2197023 | ID=MS.gene67814.t1;Parent=MS.gene67814 |
| chr3.3 | exon | 2197023 | 2197307 | 2197023 | ID=MS.gene67814.t1.exon1;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2197023 | 2197307 | 2197023 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2197510 | 2197638 | 2197510 | ID=MS.gene67814.t1.exon2;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2197510 | 2197638 | 2197510 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2197723 | 2197867 | 2197723 | ID=MS.gene67814.t1.exon3;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2197723 | 2197867 | 2197723 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2198231 | 2198412 | 2198231 | ID=MS.gene67814.t1.exon4;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2198231 | 2198412 | 2198231 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2198863 | 2199084 | 2198863 | ID=MS.gene67814.t1.exon5;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2198863 | 2199084 | 2198863 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2199175 | 2199278 | 2199175 | ID=MS.gene67814.t1.exon6;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2199175 | 2199278 | 2199175 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2199434 | 2199626 | 2199434 | ID=MS.gene67814.t1.exon7;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2199434 | 2199626 | 2199434 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2200388 | 2200504 | 2200388 | ID=MS.gene67814.t1.exon8;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2200388 | 2200504 | 2200388 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| chr3.3 | exon | 2200593 | 2200697 | 2200593 | ID=MS.gene67814.t1.exon9;Parent=MS.gene67814.t1 |
| chr3.3 | CDS | 2200593 | 2200697 | 2200593 | ID=cds.MS.gene67814.t1;Parent=MS.gene67814.t1 |
| Gene Sequence |
| Protein sequence |
