AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68043

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68043.t1 MTR_5g021710 98.580 352 5 0 1 352 1 352 0.0 733
MS.gene68043.t1 MTR_8g076110 63.944 355 75 9 4 351 2 310 8.52e-152 429
MS.gene68043.t1 MTR_4g036030 57.595 316 94 8 6 294 5 307 6.78e-115 337
MS.gene68043.t1 MTR_4g101680 56.731 312 98 6 6 294 5 302 2.78e-112 331
MS.gene68043.t1 MTR_5g012080 54.785 303 114 9 6 294 5 298 6.12e-106 315
MS.gene68043.t1 MTR_1g096430 48.949 333 134 8 4 320 3 315 3.95e-100 299
MS.gene68043.t1 MTR_2g062730 49.669 302 126 6 3 290 5 294 1.81e-91 277
MS.gene68043.t1 MTR_8g024480 44.315 343 130 7 5 297 12 343 3.86e-85 264
MS.gene68043.t1 MTR_4g035590 73.418 158 41 1 1 158 1 157 1.79e-84 260
MS.gene68043.t1 MTR_3g435150 50.526 190 81 4 8 193 16 196 4.35e-60 196
MS.gene68043.t1 MTR_2g064090 56.209 153 63 2 8 157 6 157 2.11e-59 195
MS.gene68043.t1 MTR_6g084430 54.545 154 67 1 4 157 1 151 7.35e-59 193
MS.gene68043.t1 MTR_4g108760 52.047 171 75 3 8 174 17 184 7.48e-59 194
MS.gene68043.t1 MTR_6g477900 55.263 152 65 2 8 157 6 156 6.63e-58 188
MS.gene68043.t1 MTR_3g109340 40.000 245 129 5 5 235 19 259 6.08e-57 189
MS.gene68043.t1 MTR_1g069805 50.000 176 81 4 1 174 3 173 1.84e-56 185
MS.gene68043.t1 MTR_3g064580 53.205 156 69 2 8 160 6 160 3.46e-56 194
MS.gene68043.t1 MTR_5g076850 52.903 155 70 2 8 160 6 159 7.26e-56 193
MS.gene68043.t1 MTR_7g085260 54.375 160 62 4 8 159 17 173 1.36e-55 186
MS.gene68043.t1 MTR_3g109340 39.837 246 129 6 5 235 19 260 1.53e-55 185
MS.gene68043.t1 MTR_7g097090 53.503 157 66 4 1 155 3 154 3.80e-55 182
MS.gene68043.t1 MTR_2g078700 52.830 159 66 3 8 160 23 178 5.37e-55 184
MS.gene68043.t1 MTR_6g012670 53.205 156 66 2 8 159 20 172 1.43e-54 182
MS.gene68043.t1 MTR_4g081870 50.909 165 71 3 1 158 1 162 1.61e-54 180
MS.gene68043.t1 MTR_2g064470 52.532 158 65 4 4 157 7 158 3.82e-54 180
MS.gene68043.t1 MTR_5g041940 50.318 157 69 2 8 158 3 156 4.06e-54 179
MS.gene68043.t1 MTR_7g085220 46.196 184 79 4 1 168 1 180 5.26e-54 181
MS.gene68043.t1 MTR_8g467490 36.458 288 152 11 2 266 8 287 6.63e-54 182
MS.gene68043.t1 MTR_1g008740 42.647 204 96 5 5 204 10 196 8.90e-54 181
MS.gene68043.t1 MTR_1g008740 42.647 204 96 5 5 204 24 210 1.22e-53 181
MS.gene68043.t1 MTR_3g096920 49.133 173 71 4 8 175 7 167 1.67e-53 178
MS.gene68043.t1 MTR_5g040420 45.699 186 84 5 2 175 8 188 2.86e-53 180
MS.gene68043.t1 MTR_6g011860 46.857 175 78 4 10 172 17 188 3.12e-53 180
MS.gene68043.t1 MTR_4g098630 46.073 191 93 4 6 187 4 193 3.49e-53 178
MS.gene68043.t1 MTR_7g005280 50.299 167 75 3 5 169 12 172 4.54e-53 176
MS.gene68043.t1 MTR_2g079990 44.670 197 101 3 8 202 16 206 6.12e-53 179
MS.gene68043.t1 MTR_3g070030 43.689 206 102 5 1 201 12 208 3.15e-52 177
MS.gene68043.t1 MTR_2g080010 47.126 174 74 4 3 161 10 180 7.12e-52 176
MS.gene68043.t1 MTR_7g011130 48.387 186 76 3 1 169 12 194 1.05e-51 175
MS.gene68043.t1 MTR_3g116070 53.459 159 63 4 5 160 20 170 1.23e-51 175
MS.gene68043.t1 MTR_6g032770 49.398 166 75 4 8 167 18 180 2.99e-51 175
MS.gene68043.t1 MTR_7g011120 45.366 205 95 4 1 194 1 199 4.18e-51 172
MS.gene68043.t1 MTR_3g096920 53.103 145 64 2 8 152 7 147 5.00e-51 173
MS.gene68043.t1 MTR_1g090720 44.175 206 100 6 6 197 40 244 5.71e-51 177
MS.gene68043.t1 MTR_5g014300 50.943 159 65 4 8 157 6 160 9.50e-51 172
MS.gene68043.t1 MTR_8g094580 51.592 157 66 3 8 158 7 159 1.36e-50 170
MS.gene68043.t1 MTR_4g089135 42.487 193 81 4 8 173 15 204 1.55e-50 172
MS.gene68043.t1 MTR_3g088110 49.405 168 75 4 8 169 7 170 3.66e-50 169
MS.gene68043.t1 MTR_7g100990 49.068 161 71 3 5 157 8 165 1.55e-49 169
MS.gene68043.t1 MTR_3g096140 49.669 151 71 3 10 157 9 157 1.86e-49 167
MS.gene68043.t1 MTR_8g059170 46.875 160 78 2 8 163 14 170 1.16e-48 167
MS.gene68043.t1 MTR_3g096140 49.669 151 71 3 10 157 9 157 1.37e-48 167
MS.gene68043.t1 MTR_2157s0010 45.029 171 77 3 1 157 1 168 1.47e-48 164
MS.gene68043.t1 MTR_3g093040 51.316 152 71 2 8 157 108 258 1.58e-48 166
MS.gene68043.t1 MTR_5g069030 52.288 153 70 2 8 158 25 176 2.30e-48 172
MS.gene68043.t1 MTR_2g079990 39.556 225 100 4 8 202 16 234 1.31e-47 165
MS.gene68043.t1 MTR_2g093810 49.045 157 69 3 9 157 15 168 1.44e-46 161
MS.gene68043.t1 MTR_3g093050 50.658 152 72 2 8 157 22 172 2.08e-46 166
MS.gene68043.t1 MTR_3g093050 50.658 152 72 2 8 157 22 172 2.69e-46 166
MS.gene68043.t1 MTR_1g097300 52.672 131 61 1 10 140 21 150 4.20e-46 165
MS.gene68043.t1 MTR_2g068880 41.000 200 98 4 8 189 21 218 2.07e-45 157
MS.gene68043.t1 MTR_1g090723 46.203 158 81 3 10 164 10 166 2.61e-44 161
MS.gene68043.t1 MTR_5g090970 43.114 167 78 3 5 157 15 178 2.87e-44 154
MS.gene68043.t1 MTR_8g063550 46.711 152 74 3 10 157 8 156 5.52e-44 155
MS.gene68043.t1 MTR_8g063550 46.405 153 75 3 10 158 8 157 6.78e-44 157
MS.gene68043.t1 MTR_0036s0150 45.860 157 82 3 10 164 7 162 8.14e-44 159
MS.gene68043.t1 MTR_4g134460 46.053 152 78 2 7 157 53 201 1.05e-43 156
MS.gene68043.t1 MTR_8g063550 46.753 154 73 3 10 158 8 157 1.74e-43 156
MS.gene68043.t1 MTR_4g075980 44.311 167 80 4 1 160 4 164 2.17e-43 152
MS.gene68043.t1 MTR_2g068920 44.444 171 75 4 8 160 20 188 2.49e-43 152
MS.gene68043.t1 MTR_1g090723 45.223 157 83 3 10 164 10 165 6.66e-43 157
MS.gene68043.t1 MTR_1g090723 45.223 157 83 3 10 164 10 165 8.84e-43 157
MS.gene68043.t1 MTR_5g090970 43.114 167 77 4 5 157 15 177 1.66e-42 150
MS.gene68043.t1 MTR_8g093580 46.104 154 74 3 10 158 8 157 2.24e-42 154
MS.gene68043.t1 MTR_2g086880 40.933 193 91 5 1 193 11 180 5.25e-42 153
MS.gene68043.t1 MTR_2g086880 40.933 193 91 5 1 193 11 180 6.62e-42 154
MS.gene68043.t1 MTR_3g070040 40.404 198 96 5 12 201 12 195 5.27e-41 147
MS.gene68043.t1 MTR_8g099750 43.860 171 81 5 8 168 14 179 5.97e-40 141
MS.gene68043.t1 MTR_3g096140 45.985 137 69 3 24 157 2 136 3.73e-39 142
MS.gene68043.t1 MTR_3g098810 45.181 166 74 4 8 161 14 174 1.48e-38 137
MS.gene68043.t1 MTR_3g098810 49.630 135 59 3 8 138 14 143 4.55e-36 129
MS.gene68043.t1 MTR_2g086690 45.912 159 71 7 9 155 5 160 1.97e-35 130
MS.gene68043.t1 MTR_4g052620 42.945 163 79 5 4 155 1 160 2.47e-35 130
MS.gene68043.t1 MTR_8g023840 44.295 149 75 5 8 153 11 154 2.24e-33 128
MS.gene68043.t1 MTR_4g094302 39.375 160 76 4 8 157 11 159 1.78e-31 117
MS.gene68043.t1 MTR_8g023860 44.295 149 75 5 8 153 12 155 2.89e-31 122
MS.gene68043.t1 MTR_8g023900 37.427 171 97 6 4 169 8 173 7.32e-30 119
MS.gene68043.t1 MTR_8g023900 38.506 174 94 6 4 169 184 352 8.96e-28 113
MS.gene68043.t1 MTR_4g094302 43.511 131 61 3 8 136 11 130 9.97e-30 112
MS.gene68043.t1 MTR_8g023930 39.394 165 92 5 8 169 24 183 2.75e-29 117
MS.gene68043.t1 MTR_7g105170 36.646 161 91 4 8 157 4 164 6.37e-29 112
MS.gene68043.t1 MTR_8g094580 50.495 101 43 2 64 158 6 105 6.40e-28 109
MS.gene68043.t1 MTR_8g023880 36.095 169 82 7 6 157 5 164 2.23e-24 100
MS.gene68043.t1 MTR_7g070140 49.425 87 41 2 59 143 13 98 1.02e-22 92.8
MS.gene68043.t1 MTR_8g093790 35.802 162 79 7 8 167 10 148 1.21e-20 88.6
MS.gene68043.t1 MTR_7g070150 43.902 82 44 2 107 188 8 87 1.40e-16 74.7
MS.gene68043.t1 MTR_7g083360 30.556 144 92 5 5 144 7 146 1.25e-13 68.2
MS.gene68043.t1 MTR_3g096400 27.439 164 94 6 8 156 7 160 1.90e-13 68.9
MS.gene68043.t1 MTR_7g083330 30.469 128 84 4 8 134 18 141 6.32e-13 67.0
MS.gene68043.t1 MTR_7g083370 29.323 133 89 4 3 134 5 133 2.45e-12 64.3
MS.gene68043.t1 MTR_1g087190 53.333 45 20 1 10 53 7 51 7.57e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68043.t1 AT2G18060 62.599 377 102 14 1 351 1 364 1.58e-152 434
MS.gene68043.t1 AT2G18060 62.599 377 102 14 1 351 1 364 1.58e-152 434
MS.gene68043.t1 AT4G36160 64.848 330 86 12 1 310 5 324 2.56e-142 408
MS.gene68043.t1 AT4G36160 64.848 330 86 12 1 310 1 320 2.77e-142 408
MS.gene68043.t1 AT4G36160 64.848 330 86 12 1 310 1 320 2.77e-142 408
MS.gene68043.t1 AT5G66300 59.603 302 82 9 6 291 9 286 3.28e-118 343
MS.gene68043.t1 AT1G12260 51.462 342 109 8 6 294 5 342 1.75e-107 320
MS.gene68043.t1 AT1G62700 49.858 353 125 7 6 315 5 348 1.44e-106 318
MS.gene68043.t1 AT1G62700 49.858 353 125 7 6 315 5 348 1.44e-106 318
MS.gene68043.t1 AT1G12260 54.452 292 123 4 6 294 5 289 1.21e-103 308
MS.gene68043.t1 AT1G71930 51.186 295 120 5 4 293 5 280 2.61e-98 294
MS.gene68043.t1 AT1G71930 51.186 295 120 5 4 293 5 280 2.61e-98 294
MS.gene68043.t1 AT5G62380 50.831 301 129 6 1 291 1 292 2.73e-96 290
MS.gene68043.t1 AT5G62380 50.831 301 129 6 1 291 1 292 2.73e-96 290
MS.gene68043.t1 AT2G46770 50.489 307 102 9 5 291 13 289 8.59e-91 276
MS.gene68043.t1 AT1G32770 47.231 307 125 8 5 292 13 301 3.00e-84 259
MS.gene68043.t1 AT2G18060 53.287 289 97 14 88 351 1 276 1.12e-83 255
MS.gene68043.t1 AT3G61910 48.243 313 92 9 5 292 8 275 1.26e-82 254
MS.gene68043.t1 AT4G10350 71.519 158 43 1 3 158 4 161 3.55e-82 253
MS.gene68043.t1 AT1G33280 70.253 158 46 1 1 158 1 157 2.97e-81 250
MS.gene68043.t1 AT1G79580 48.355 304 120 9 8 289 17 305 7.34e-81 251
MS.gene68043.t1 AT1G79580 48.355 304 120 9 8 289 17 305 7.34e-81 251
MS.gene68043.t1 AT1G79580 48.355 304 120 9 8 289 17 305 7.34e-81 251
MS.gene68043.t1 AT1G79580 48.355 304 120 9 8 289 17 305 7.34e-81 251
MS.gene68043.t1 AT1G79580 48.355 304 120 9 8 289 17 305 7.34e-81 251
MS.gene68043.t1 AT3G18400 56.329 158 65 2 4 160 1 155 3.17e-62 201
MS.gene68043.t1 AT3G17730 54.430 158 69 2 8 163 6 162 1.52e-59 192
MS.gene68043.t1 AT5G39610 52.695 167 72 3 8 170 20 183 7.33e-59 192
MS.gene68043.t1 AT2G24430 52.976 168 69 4 5 169 13 173 1.91e-58 192
MS.gene68043.t1 AT2G24430 52.976 168 69 4 5 169 13 173 1.91e-58 192
MS.gene68043.t1 AT5G07680 52.410 166 72 3 8 169 3 165 4.28e-58 191
MS.gene68043.t1 AT5G07680 52.410 166 72 3 8 169 17 179 7.22e-58 191
MS.gene68043.t1 AT5G61430 55.844 154 61 3 8 157 16 166 1.47e-57 190
MS.gene68043.t1 AT1G69490 51.250 160 69 2 5 158 6 162 6.52e-57 186
MS.gene68043.t1 AT1G76420 55.975 159 64 3 2 157 16 171 1.35e-56 187
MS.gene68043.t1 AT5G17260 54.248 153 66 2 8 157 6 157 1.73e-56 191
MS.gene68043.t1 AT1G65910 54.605 152 66 2 8 157 6 156 6.75e-56 192
MS.gene68043.t1 AT3G03200 54.248 153 66 2 8 157 6 157 7.96e-56 189
MS.gene68043.t1 AT3G10490 44.059 202 103 3 3 201 22 216 1.79e-55 181
MS.gene68043.t1 AT3G29035 51.875 160 70 2 8 163 24 180 1.98e-55 184
MS.gene68043.t1 AT1G56010 41.518 224 113 6 4 220 15 227 1.19e-54 182
MS.gene68043.t1 AT3G10490 41.818 220 117 4 3 219 22 233 2.05e-54 185
MS.gene68043.t1 AT1G54330 56.000 150 64 2 8 157 6 153 2.20e-54 181
MS.gene68043.t1 AT5G18270 50.877 171 73 5 8 170 21 188 9.88e-54 180
MS.gene68043.t1 AT3G10480 44.792 192 96 3 6 194 25 209 1.48e-53 182
MS.gene68043.t1 AT5G53950 51.205 166 72 3 8 167 17 179 2.63e-53 180
MS.gene68043.t1 AT3G15170 51.497 167 72 4 5 165 17 180 3.65e-53 178
MS.gene68043.t1 AT5G18270 50.292 171 74 5 8 170 21 188 4.29e-53 178
MS.gene68043.t1 AT3G12977 49.383 162 76 3 4 162 14 172 4.88e-53 176
MS.gene68043.t1 AT5G46590 53.205 156 68 3 6 157 4 158 5.25e-53 177
MS.gene68043.t1 AT4G10350 73.148 108 27 1 53 158 7 114 6.11e-53 177
MS.gene68043.t1 AT5G46590 58.088 136 55 2 6 140 4 138 2.07e-52 175
MS.gene68043.t1 AT3G04060 49.697 165 75 4 8 167 20 181 4.62e-52 176
MS.gene68043.t1 AT3G04070 48.795 166 68 4 6 157 8 170 7.07e-52 176
MS.gene68043.t1 AT3G10480 44.792 192 95 4 6 194 25 208 1.09e-51 177
MS.gene68043.t1 AT4G27410 49.693 163 76 3 8 168 14 172 1.22e-51 173
MS.gene68043.t1 AT5G63790 48.235 170 77 3 8 170 60 225 1.94e-51 174
MS.gene68043.t1 AT5G63790 48.235 170 77 3 8 170 50 215 2.10e-51 173
MS.gene68043.t1 AT4G17980 51.266 158 70 3 6 157 4 160 2.66e-51 171
MS.gene68043.t1 AT4G17980 51.266 158 70 3 6 157 4 160 5.07e-51 172
MS.gene68043.t1 AT3G15500 50.000 156 73 2 7 160 13 165 5.62e-51 172
MS.gene68043.t1 AT2G43000 49.057 159 75 3 10 165 20 175 5.83e-51 171
MS.gene68043.t1 AT5G04410 46.927 179 84 5 6 180 7 178 7.89e-51 178
MS.gene68043.t1 AT2G33480 49.045 157 74 1 8 164 15 165 8.50e-51 170
MS.gene68043.t1 AT4G28530 41.600 250 111 10 1 229 3 238 1.57e-50 172
MS.gene68043.t1 AT1G77450 51.613 155 66 3 9 158 11 161 1.84e-50 169
MS.gene68043.t1 AT5G39820 41.237 194 84 4 1 169 13 201 1.96e-50 171
MS.gene68043.t1 AT5G08790 50.625 160 68 3 8 160 7 162 4.86e-50 169
MS.gene68043.t1 AT2G33480 49.057 159 73 2 8 164 15 167 6.63e-50 168
MS.gene68043.t1 AT3G10500 50.323 155 72 3 6 157 7 159 7.21e-50 175
MS.gene68043.t1 AT3G10480 39.286 224 95 3 6 194 25 242 9.00e-50 174
MS.gene68043.t1 AT1G52890 49.677 155 73 2 8 160 14 165 1.03e-49 169
MS.gene68043.t1 AT1G61110 47.619 168 70 4 8 160 16 180 1.18e-49 169
MS.gene68043.t1 AT1G33060 53.165 158 68 4 3 157 20 174 2.98e-49 175
MS.gene68043.t1 AT1G33060 53.165 158 68 4 3 157 20 174 3.12e-49 175
MS.gene68043.t1 AT1G01720 49.682 157 69 3 8 158 7 159 6.56e-49 166
MS.gene68043.t1 AT4G35580 48.876 178 87 3 3 178 5 180 7.00e-49 172
MS.gene68043.t1 AT4G35580 48.876 178 87 3 3 178 5 180 8.48e-49 172
MS.gene68043.t1 AT4G27410 46.893 177 77 4 8 168 14 189 8.56e-49 167
MS.gene68043.t1 AT4G35580 50.898 167 78 3 3 167 5 169 9.34e-49 172
MS.gene68043.t1 AT3G15510 49.068 161 64 4 12 157 21 178 7.60e-48 166
MS.gene68043.t1 AT3G04070 53.676 136 55 3 6 136 8 140 7.67e-48 165
MS.gene68043.t1 AT1G26870 45.143 175 78 4 2 162 10 180 1.01e-47 166
MS.gene68043.t1 AT5G13180 51.250 160 64 5 8 161 14 165 3.44e-47 160
MS.gene68043.t1 AT5G24590 53.247 154 68 4 8 158 13 165 4.16e-47 166
MS.gene68043.t1 AT3G49530 50.000 158 74 5 3 157 9 164 2.92e-46 162
MS.gene68043.t1 AT3G49530 50.000 158 74 5 3 157 9 164 6.11e-46 163
MS.gene68043.t1 AT1G32510 45.679 162 77 4 6 157 4 164 1.98e-45 157
MS.gene68043.t1 AT2G27300 42.690 171 91 3 1 171 7 170 4.05e-45 157
MS.gene68043.t1 AT2G02450 45.395 152 79 2 7 157 50 198 1.61e-44 157
MS.gene68043.t1 AT2G02450 45.395 152 79 2 7 157 50 198 2.11e-44 157
MS.gene68043.t1 AT1G34190 44.371 151 79 3 10 157 18 166 1.06e-42 156
MS.gene68043.t1 AT1G34180 45.865 133 71 1 10 142 18 149 1.45e-42 154
MS.gene68043.t1 AT5G22290 42.424 165 88 3 3 166 15 173 1.51e-42 151
MS.gene68043.t1 AT1G34180 45.865 133 71 1 10 142 18 149 3.70e-42 154
MS.gene68043.t1 AT5G64060 44.737 152 77 3 10 157 8 156 5.71e-42 150
MS.gene68043.t1 AT5G09330 46.053 152 75 3 10 157 8 156 2.46e-41 151
MS.gene68043.t1 AT5G09330 46.053 152 75 3 10 157 8 156 2.46e-41 151
MS.gene68043.t1 AT5G09330 46.053 152 75 3 10 157 8 156 2.46e-41 151
MS.gene68043.t1 AT5G09330 46.053 152 75 3 10 157 8 156 2.46e-41 151
MS.gene68043.t1 AT5G09330 46.053 152 75 3 10 157 8 156 2.46e-41 151
MS.gene68043.t1 AT1G34180 40.373 161 83 3 10 157 18 178 4.05e-41 150
MS.gene68043.t1 AT3G12910 44.318 176 73 6 10 165 23 193 4.27e-41 146
MS.gene68043.t1 AT1G52880 45.509 167 70 4 12 162 21 182 6.07e-41 146
MS.gene68043.t1 AT2G17040 42.208 154 80 3 10 160 8 155 7.91e-41 145
MS.gene68043.t1 AT1G34180 43.056 144 71 2 10 142 18 161 9.98e-41 150
MS.gene68043.t1 AT5G04395 44.516 155 73 3 3 144 23 177 1.70e-40 141
MS.gene68043.t1 AT1G56010 43.478 161 77 4 66 220 8 160 3.80e-39 140
MS.gene68043.t1 AT3G44290 44.800 125 67 1 10 134 16 138 1.67e-38 137
MS.gene68043.t1 AT3G44290 44.800 125 67 1 10 134 16 138 8.47e-38 138
MS.gene68043.t1 AT5G61430 61.224 98 34 2 64 157 6 103 1.34e-37 136
MS.gene68043.t1 AT1G32870 43.506 154 80 3 8 157 10 160 1.61e-36 138
MS.gene68043.t1 AT1G32870 43.506 154 80 3 8 157 10 160 1.81e-36 138
MS.gene68043.t1 AT3G12977 52.212 113 48 3 53 162 10 119 2.36e-36 131
MS.gene68043.t1 AT1G32870 43.506 154 80 3 8 157 46 196 2.76e-36 138
MS.gene68043.t1 AT2G33480 49.515 103 50 1 64 164 8 110 1.03e-30 116
MS.gene68043.t1 AT5G22380 43.478 138 68 5 4 134 1 135 2.78e-27 107
MS.gene68043.t1 AT4G28530 43.165 139 56 4 1 120 3 137 1.06e-26 108
MS.gene68043.t1 AT4G01520 37.748 151 85 5 9 154 5 151 5.33e-26 105
MS.gene68043.t1 AT3G44350 37.821 156 85 6 11 157 8 160 6.00e-26 104
MS.gene68043.t1 AT1G02230 42.941 170 83 9 9 170 4 167 6.06e-26 107
MS.gene68043.t1 AT3G44350 38.931 131 71 4 11 135 8 135 1.08e-25 101
MS.gene68043.t1 AT4G01540 37.584 149 84 5 11 154 7 151 8.88e-25 104
MS.gene68043.t1 AT4G01540 37.584 149 84 5 11 154 7 151 1.24e-24 104
MS.gene68043.t1 AT4G01540 37.584 149 84 5 11 154 7 151 1.30e-24 104
MS.gene68043.t1 AT4G01540 37.584 149 84 5 11 154 7 151 1.31e-24 103
MS.gene68043.t1 AT5G64530 32.961 179 87 6 8 168 3 166 1.76e-24 99.0
MS.gene68043.t1 AT4G01550 37.086 151 87 4 11 157 7 153 2.04e-24 103
MS.gene68043.t1 AT3G04420 40.310 129 72 3 9 134 4 130 4.41e-24 100
MS.gene68043.t1 AT1G02250 39.645 169 89 8 9 170 4 166 1.16e-23 100
MS.gene68043.t1 AT3G04420 40.310 129 72 3 9 134 4 130 1.51e-23 100
MS.gene68043.t1 AT5G64530 39.695 131 62 5 8 136 3 118 2.08e-23 95.1
MS.gene68043.t1 AT1G01010 37.662 154 78 7 11 153 6 152 9.88e-23 99.0
MS.gene68043.t1 AT2G43000 45.833 96 49 2 73 165 2 97 6.12e-22 92.4
MS.gene68043.t1 AT3G10490 35.971 139 79 3 84 219 2 133 9.46e-22 95.1
MS.gene68043.t1 AT3G10490 35.971 139 79 3 84 219 2 133 9.46e-22 95.1
MS.gene68043.t1 AT1G02220 39.231 130 71 4 8 134 3 127 8.50e-20 90.1
MS.gene68043.t1 AT5G50820 37.857 140 62 6 8 138 17 140 3.90e-19 84.7
MS.gene68043.t1 AT3G56530 27.815 151 105 2 7 155 51 199 7.24e-17 80.9
MS.gene68043.t1 AT5G22290 41.558 77 41 1 90 166 2 74 3.83e-15 74.7
MS.gene68043.t1 AT5G14000 26.786 168 115 3 8 173 15 176 1.01e-14 72.8
MS.gene68043.t1 AT5G14000 29.771 131 85 2 8 136 15 140 1.18e-13 68.6
MS.gene68043.t1 AT3G55210 24.699 166 108 5 3 155 6 167 2.36e-12 67.0
MS.gene68043.t1 AT3G04430 34.074 135 72 6 14 135 6 136 1.28e-11 63.5

Find 69 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATAAGATGAAACTAAT+TGG 0.196107 5.3:+12541371 MS.gene68043:CDS
AGGCTTGAATCTGATGAAAA+TGG 0.260946 5.3:+12541470 MS.gene68043:CDS
AGTTCAGATTGCAGTGATAT+TGG 0.262862 5.3:+12543603 MS.gene68043:CDS
TGTTACTGCAGCAGGGTAAT+AGG 0.270150 5.3:+12543544 MS.gene68043:CDS
GAGCTACCATGGCTGGGTTT+TGG 0.285122 5.3:+12541321 MS.gene68043:CDS
CAATCAGATTTCTGTCCATT+AGG 0.301864 5.3:-12541431 None:intergenic
AATCAGATTTCTGTCCATTA+GGG 0.308366 5.3:-12541430 None:intergenic
CTGTTAGTTCTTGTCCCTGT+TGG 0.308789 5.3:-12541299 None:intergenic
ATAATAATAGCAACCTGTTT+TGG 0.310133 5.3:-12543362 None:intergenic
CTTACACATGTTATAACTTT+GGG 0.324312 5.3:-12543205 None:intergenic
GTGCTTGGCCTCTTTACTAA+TGG 0.340736 5.3:-12543297 None:intergenic
GGAGTGTTGTTGTCAAGTTT+TGG 0.348018 5.3:+12543486 MS.gene68043:CDS
GCTTACACATGTTATAACTT+TGG 0.349128 5.3:-12543206 None:intergenic
GTTCAGATTGCAGTGATATT+GGG 0.368792 5.3:+12543604 MS.gene68043:CDS
CTTGAGATTAGTTGATCAAT+TGG 0.382802 5.3:-12543162 None:intergenic
ATGATAAGATGAAACTAATT+GGG 0.389752 5.3:+12541372 MS.gene68043:CDS
ATTGGATCATGCATGAATAT+AGG 0.391373 5.3:+12541450 MS.gene68043:CDS
GGCATTGATGTTACTGCAGC+AGG 0.393119 5.3:+12543536 MS.gene68043:CDS
GTTACTGCAGCAGGGTAATA+GGG 0.411682 5.3:+12543545 MS.gene68043:CDS
CTACAAATACAGTTACTGAT+TGG 0.424836 5.3:+12543406 MS.gene68043:CDS
CATGTGTCCCACCAGGGTTT+CGG 0.436059 5.3:+12540884 MS.gene68043:CDS
CCAACTGATGAAGAACTTGT+TGG 0.437262 5.3:+12540913 MS.gene68043:CDS
CTTTGGGATAAATAGCTTTG+AGG 0.440208 5.3:-12543189 None:intergenic
GAGAGCTCTTGATAAGTTTG+TGG 0.441089 5.3:+12543428 MS.gene68043:CDS
ACTAACAGAGCTACCATGGC+TGG 0.441475 5.3:+12541314 MS.gene68043:CDS
CTTCATTGCCATTAGTAAAG+AGG 0.446048 5.3:+12543289 MS.gene68043:CDS
ATGACATTAACGACCAAAAC+AGG 0.448853 5.3:+12543349 MS.gene68043:CDS
CTCTTTACTAATGGCAATGA+AGG 0.455370 5.3:-12543288 None:intergenic
ATGGAGTCATGTGTCCCACC+AGG 0.483355 5.3:+12540877 MS.gene68043:CDS
ATGAAATGGCAGAGAGATGC+AGG 0.483796 5.3:+12541219 MS.gene68043:intron
TACAAAGGAAGAGCCCCTAA+TGG 0.487100 5.3:+12541416 MS.gene68043:CDS
CCAACAAGTTCTTCATCAGT+TGG 0.496930 5.3:-12540913 None:intergenic
CAACAAGTTCTTCATCAGTT+GGG 0.501223 5.3:-12540912 None:intergenic
CTAATGGACAGAAATCTGAT+TGG 0.503538 5.3:+12541432 MS.gene68043:CDS
ATTGAACCATGGGATCTTCA+AGG 0.511774 5.3:+12541009 MS.gene68043:CDS
TGGCAGAGAGATGCAGGATC+GGG 0.511955 5.3:+12541225 MS.gene68043:intron
TCTTTATCGTATTGAACCAT+GGG 0.515850 5.3:+12540999 MS.gene68043:CDS
ATCAATGCCATGTCCGAGCT+AGG 0.517059 5.3:-12543522 None:intergenic
CTATGAAGAAGCTGCAAGTA+GGG 0.522407 5.3:+12543119 MS.gene68043:CDS
TGGTGGGACACATGACTCCA+TGG 0.525120 5.3:-12540875 None:intergenic
CATGAAGTTGAAACTGATCA+AGG 0.526644 5.3:+12543465 MS.gene68043:CDS
TGATGAAAATGGACCTCCAC+AGG 0.528524 5.3:+12541481 MS.gene68043:CDS
ATCTTTATCGTATTGAACCA+TGG 0.534260 5.3:+12540998 MS.gene68043:CDS
ATGGCAGAGAGATGCAGGAT+CGG 0.542557 5.3:+12541224 MS.gene68043:intron
AGATGAAACTAATTGGGATG+AGG 0.547240 5.3:+12541378 MS.gene68043:CDS
AACAAATAATAACCCTAGCT+CGG 0.552141 5.3:+12543509 MS.gene68043:CDS
CGATCTCTCTGATAACATCA+AGG 0.569395 5.3:-12540975 None:intergenic
TCTATGAAGAAGCTGCAAGT+AGG 0.576413 5.3:+12543118 MS.gene68043:CDS
TCAATGCCATGTCCGAGCTA+GGG 0.581122 5.3:-12543521 None:intergenic
AAGCACAATGTCTCTAGTAT+CGG 0.584153 5.3:+12543314 MS.gene68043:CDS
TAATAACCCTAGCTCGGACA+TGG 0.592989 5.3:+12543515 MS.gene68043:CDS
GATACTAGAGACATTGTGCT+TGG 0.594750 5.3:-12543312 None:intergenic
CAATTGATCAACTAATCTCA+AGG 0.597995 5.3:+12543163 MS.gene68043:CDS
AAGAACTAACAGAGCTACCA+TGG 0.599903 5.3:+12541310 MS.gene68043:CDS
GTTGGGTGGAACCGAAACCC+TGG 0.606391 5.3:-12540895 None:intergenic
CAAGTTCTTCATCAGTTGGG+TGG 0.606733 5.3:-12540909 None:intergenic
ATCAGATTTCTGTCCATTAG+GGG 0.607393 5.3:-12541429 None:intergenic
GGTTGATTAGTTACCTGTGG+AGG 0.611776 5.3:-12541494 None:intergenic
TGGAGTCATGTGTCCCACCA+GGG 0.614596 5.3:+12540878 MS.gene68043:CDS
CTAACAGAGCTACCATGGCT+GGG 0.617618 5.3:+12541315 MS.gene68043:CDS
TTGATCAATTGGATCCACAA+TGG 0.624058 5.3:-12543151 None:intergenic
TGTATACCTTGAAGATCCCA+TGG 0.629021 5.3:-12541015 None:intergenic
AATGAAGGACTTTCAAGCTG+AGG 0.644381 5.3:-12543273 None:intergenic
AGCTTTCCAAAACCCAGCCA+TGG 0.648009 5.3:-12541327 None:intergenic
GCATTGATGTTACTGCAGCA+GGG 0.654680 5.3:+12543537 MS.gene68043:CDS
TAGGGTCAACAATTCCATTG+TGG 0.657837 5.3:+12543137 MS.gene68043:CDS
GGTATGAAGAGCAGAATGAG+TGG 0.672358 5.3:+12541246 MS.gene68043:CDS
GGGTGGAACCGAAACCCTGG+TGG 0.689016 5.3:-12540892 None:intergenic
GGTGGAACCGAAACCCTGGT+GGG 0.689627 5.3:-12540891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATGATAATGTT+AGG - chr5.3:12541544-12541563 None:intergenic 10.0%
!! AAATAATTATGTGAATGAAA+TGG + chr5.3:12541205-12541224 MS.gene68043:intron 15.0%
!! TAGAAAAAAATAAAAGCAAA+AGG + chr5.3:12542336-12542355 MS.gene68043:intron 15.0%
!! TTTATTACGAATAAAAGTTT+AGG - chr5.3:12542571-12542590 None:intergenic 15.0%
!! AAAATTATGCAAAAGCAAAA+GGG + chr5.3:12542294-12542313 MS.gene68043:intron 20.0%
!! AATTGCATTTCAACTATATA+TGG - chr5.3:12541119-12541138 None:intergenic 20.0%
!! AGAAGGATATAAGTATTATA+TGG - chr5.3:12541518-12541537 None:intergenic 20.0%
!! ATAATTAGTAGTTACATACA+TGG - chr5.3:12541729-12541748 None:intergenic 20.0%
!! ATGATAAGATGAAACTAATT+GGG + chr5.3:12541372-12541391 MS.gene68043:CDS 20.0%
!! GACAATACATAATATATGTA+AGG + chr5.3:12541831-12541850 MS.gene68043:intron 20.0%
!! TATAATCTAAATGTTCAACA+AGG + chr5.3:12542075-12542094 MS.gene68043:intron 20.0%
!! TATGATAAGATGAAACTAAT+TGG + chr5.3:12541371-12541390 MS.gene68043:CDS 20.0%
!! TCTAATGTCAATAAAATGAT+CGG - chr5.3:12542897-12542916 None:intergenic 20.0%
!! TTAATTAAGTATGAAACTTG+AGG - chr5.3:12542986-12543005 None:intergenic 20.0%
!! TTAATTGTATGTGTTAATGA+CGG - chr5.3:12542458-12542477 None:intergenic 20.0%
!!! AAAACCCTAATATTTTGTTA+GGG - chr5.3:12541077-12541096 None:intergenic 20.0%
!!! AATAAAAGTTTAGGTCTTTT+TGG - chr5.3:12542562-12542581 None:intergenic 20.0%
!!! ATAAAAGTTTAGGTCTTTTT+GGG - chr5.3:12542561-12542580 None:intergenic 20.0%
!!! ATCATTTTATTGACATTAGA+CGG + chr5.3:12542897-12542916 MS.gene68043:intron 20.0%
!!! TTAAACTATATGTTTTGTAC+AGG + chr5.3:12543002-12543021 MS.gene68043:intron 20.0%
!!! TTCTTTTGTTGATATGTATT+AGG - chr5.3:12542421-12542440 None:intergenic 20.0%
!!! TTGGATACTTTTTATCTTTA+TGG - chr5.3:12541283-12541302 None:intergenic 20.0%
!!! TTTTCCCTAACAAAATATTA+GGG + chr5.3:12541070-12541089 MS.gene68043:intron 20.0%
! AAATGAATACAGATCAATCA+TGG - chr5.3:12541163-12541182 None:intergenic 25.0%
! AATCTCAACCAATAAAAAGA+TGG + chr5.3:12542780-12542799 MS.gene68043:intron 25.0%
! ACTTATCTATGAAATGTCAA+AGG + chr5.3:12541621-12541640 MS.gene68043:intron 25.0%
! CTTACACATGTTATAACTTT+GGG - chr5.3:12543208-12543227 None:intergenic 25.0%
! GAAAATTATGCAAAAGCAAA+AGG + chr5.3:12542293-12542312 MS.gene68043:intron 25.0%
! GTTGAACATTTAGATTATAG+TGG - chr5.3:12542074-12542093 None:intergenic 25.0%
! TTTATGTAGTTATTACTGTC+TGG + chr5.3:12541954-12541973 MS.gene68043:intron 25.0%
! TTTGATCTTATAATCTCAAG+CGG + chr5.3:12541662-12541681 MS.gene68043:intron 25.0%
!! AATATTTTGTTAGGGAAAAG+AGG - chr5.3:12541069-12541088 None:intergenic 25.0%
!! ATAATAATAGCAACCTGTTT+TGG - chr5.3:12543365-12543384 None:intergenic 25.0%
!! ATATTTTGTTAGGGAAAAGA+GGG - chr5.3:12541068-12541087 None:intergenic 25.0%
!! ATGATAATGTTAGGAATAGA+AGG - chr5.3:12541535-12541554 None:intergenic 25.0%
!! CAAAACCCTAATATTTTGTT+AGG - chr5.3:12541078-12541097 None:intergenic 25.0%
!! CATAATTTTATACATCGTTC+TGG + chr5.3:12542721-12542740 MS.gene68043:intron 25.0%
!! CTTTTCCCTAACAAAATATT+AGG + chr5.3:12541069-12541088 MS.gene68043:intron 25.0%
!!! AAAAAGTACTATTGAAGGAT+GGG + chr5.3:12543083-12543102 MS.gene68043:CDS 25.0%
!!! AAAGATAAAAAGTATCCAAC+AGG + chr5.3:12541284-12541303 MS.gene68043:CDS 25.0%
!!! AAGATAAAAAGTATCCAACA+GGG + chr5.3:12541285-12541304 MS.gene68043:CDS 25.0%
!!! AGTACAAAAAGTACTATTGA+AGG + chr5.3:12543078-12543097 MS.gene68043:CDS 25.0%
!!! CAATAGTACTTTTTGTACTT+TGG - chr5.3:12543077-12543096 None:intergenic 25.0%
!!! GTGAACTACTCTTTTTTTTA+TGG - chr5.3:12541875-12541894 None:intergenic 25.0%
!!! GTTTACATTTTGATTGTCAA+AGG + chr5.3:12542203-12542222 MS.gene68043:intron 25.0%
AACAAATAATAACCCTAGCT+CGG + chr5.3:12543509-12543528 MS.gene68043:CDS 30.0%
AATCAGATTTCTGTCCATTA+GGG - chr5.3:12541433-12541452 None:intergenic 30.0%
ACATAAAGATCAAACTAGCA+TGG - chr5.3:12541941-12541960 None:intergenic 30.0%
ATCTTTATCGTATTGAACCA+TGG + chr5.3:12540998-12541017 MS.gene68043:CDS 30.0%
ATTGGATCATGCATGAATAT+AGG + chr5.3:12541450-12541469 MS.gene68043:CDS 30.0%
CAATTGATCAACTAATCTCA+AGG + chr5.3:12543163-12543182 MS.gene68043:CDS 30.0%
CATTTAGATTATAGTGGTCT+AGG - chr5.3:12542068-12542087 None:intergenic 30.0%
CTACAAATACAGTTACTGAT+TGG + chr5.3:12543406-12543425 MS.gene68043:CDS 30.0%
GCTTACACATGTTATAACTT+TGG - chr5.3:12543209-12543228 None:intergenic 30.0%
TCTGAACTTGCATTCAAAAA+TGG - chr5.3:12543591-12543610 None:intergenic 30.0%
TCTTTATCGTATTGAACCAT+GGG + chr5.3:12540999-12541018 MS.gene68043:CDS 30.0%
! AACTATATGTTTTGTACAGG+AGG + chr5.3:12543005-12543024 MS.gene68043:intron 30.0%
! CAAAAGTGTGTAAGCATAAA+AGG - chr5.3:12542184-12542203 None:intergenic 30.0%
! CTTGAGATTAGTTGATCAAT+TGG - chr5.3:12543165-12543184 None:intergenic 30.0%
! GTTGCTTTATATTGCAAAAG+AGG - chr5.3:12542377-12542396 None:intergenic 30.0%
! TATTTTGTTAGGGAAAAGAG+GGG - chr5.3:12541067-12541086 None:intergenic 30.0%
! TGCATAATTTTCCATCAGTT+TGG - chr5.3:12542285-12542304 None:intergenic 30.0%
!! ATGCACTGATTGTATGTTTA+TGG - chr5.3:12542868-12542887 None:intergenic 30.0%
!! CAAAAAGTACTATTGAAGGA+TGG + chr5.3:12543082-12543101 MS.gene68043:CDS 30.0%
!!! AAGACTCTAGTTTTCTACAA+AGG + chr5.3:12541401-12541420 MS.gene68043:CDS 30.0%
!!! ACTACTCTTTTTTTTATGGC+CGG - chr5.3:12541871-12541890 None:intergenic 30.0%
AAGCACAATGTCTCTAGTAT+CGG + chr5.3:12543314-12543333 MS.gene68043:CDS 35.0%
ACATACAATCAGTGCATTTG+AGG + chr5.3:12542871-12542890 MS.gene68043:intron 35.0%
ACCAATAAAAAGATGGTGTG+TGG + chr5.3:12542787-12542806 MS.gene68043:intron 35.0%
AGATCAAACTCTTACCATTC+AGG - chr5.3:12541650-12541669 None:intergenic 35.0%
AGATGAAACTAATTGGGATG+AGG + chr5.3:12541378-12541397 MS.gene68043:CDS 35.0%
AGGCTTGAATCTGATGAAAA+TGG + chr5.3:12541470-12541489 MS.gene68043:CDS 35.0%
AGTGTGTAAGCATAAAAGGA+AGG - chr5.3:12542180-12542199 None:intergenic 35.0%
AGTTCAGATTGCAGTGATAT+TGG + chr5.3:12543603-12543622 MS.gene68043:CDS 35.0%
ATCAGATTTCTGTCCATTAG+GGG - chr5.3:12541432-12541451 None:intergenic 35.0%
ATGACATTAACGACCAAAAC+AGG + chr5.3:12543349-12543368 MS.gene68043:CDS 35.0%
CAACAAGTTCTTCATCAGTT+GGG - chr5.3:12540915-12540934 None:intergenic 35.0%
CAATCAGATTTCTGTCCATT+AGG - chr5.3:12541434-12541453 None:intergenic 35.0%
CATGAAGTTGAAACTGATCA+AGG + chr5.3:12543465-12543484 MS.gene68043:CDS 35.0%
CCTCATAGTTACAGATAAAC+GGG + chr5.3:12542531-12542550 MS.gene68043:intron 35.0%
CTCTTTACTAATGGCAATGA+AGG - chr5.3:12543291-12543310 None:intergenic 35.0%
CTTCATTGCCATTAGTAAAG+AGG + chr5.3:12543289-12543308 MS.gene68043:CDS 35.0%
GCCTCATAGTTACAGATAAA+CGG + chr5.3:12542530-12542549 MS.gene68043:intron 35.0%
GTATGAAACTTGAGGAAAGA+TGG - chr5.3:12542978-12542997 None:intergenic 35.0%
GTGTGTAAGCATAAAAGGAA+GGG - chr5.3:12542179-12542198 None:intergenic 35.0%
GTTCAGATTGCAGTGATATT+GGG + chr5.3:12543604-12543623 MS.gene68043:CDS 35.0%
TTGATCAATTGGATCCACAA+TGG - chr5.3:12543154-12543173 None:intergenic 35.0%
! AGTCGGAAACATAGGTATTT+TGG + chr5.3:12542612-12542631 MS.gene68043:intron 35.0%
! ATATGTTTTGTACAGGAGGA+AGG + chr5.3:12543009-12543028 MS.gene68043:intron 35.0%
! ATTTTGTTAGGGAAAAGAGG+GGG - chr5.3:12541066-12541085 None:intergenic 35.0%
! CTAATGGACAGAAATCTGAT+TGG + chr5.3:12541432-12541451 MS.gene68043:CDS 35.0%
! TATGGTTGATTAGTTACCTG+TGG - chr5.3:12541500-12541519 None:intergenic 35.0%
! TCCACACACCATCTTTTTAT+TGG - chr5.3:12542791-12542810 None:intergenic 35.0%
!! CTTTGGGATAAATAGCTTTG+AGG - chr5.3:12543192-12543211 None:intergenic 35.0%
!!! CTACTCTTTTTTTTATGGCC+GGG - chr5.3:12541870-12541889 None:intergenic 35.0%
AACTTTGCAGTCGGAAACAT+AGG + chr5.3:12542604-12542623 MS.gene68043:intron 40.0%
AAGAACTAACAGAGCTACCA+TGG + chr5.3:12541310-12541329 MS.gene68043:CDS 40.0%
AATGAAGGACTTTCAAGCTG+AGG - chr5.3:12543276-12543295 None:intergenic 40.0%
AATGTCAAAGGTCACCTGAA+TGG + chr5.3:12541633-12541652 MS.gene68043:intron 40.0%
AATTCTCTATGACCGTACGT+AGG - chr5.3:12542845-12542864 None:intergenic 40.0%
ATTCTCTATGACCGTACGTA+GGG - chr5.3:12542844-12542863 None:intergenic 40.0%
ATTGAACCATGGGATCTTCA+AGG + chr5.3:12541009-12541028 MS.gene68043:CDS 40.0%
CCAACAAGTTCTTCATCAGT+TGG - chr5.3:12540916-12540935 None:intergenic 40.0%
CCAACTGATGAAGAACTTGT+TGG + chr5.3:12540913-12540932 MS.gene68043:CDS 40.0%
CCCGTTTATCTGTAACTATG+AGG - chr5.3:12542534-12542553 None:intergenic 40.0%
CGATCTCTCTGATAACATCA+AGG - chr5.3:12540978-12540997 None:intergenic 40.0%
CTATGAAGAAGCTGCAAGTA+GGG + chr5.3:12543119-12543138 MS.gene68043:CDS 40.0%
GAGAGCTCTTGATAAGTTTG+TGG + chr5.3:12543428-12543447 MS.gene68043:CDS 40.0%
GATACTAGAGACATTGTGCT+TGG - chr5.3:12543315-12543334 None:intergenic 40.0%
GATCTTATAATCTCAAGCGG+CGG + chr5.3:12541665-12541684 MS.gene68043:intron 40.0%
TAAGGTCAGAGTTCAAATCC+CGG + chr5.3:12541849-12541868 MS.gene68043:intron 40.0%
TAGGGTCAACAATTCCATTG+TGG + chr5.3:12543137-12543156 MS.gene68043:CDS 40.0%
TCAACTGAGCTAAACTAACG+AGG - chr5.3:12541807-12541826 None:intergenic 40.0%
TCTATGAAGAAGCTGCAAGT+AGG + chr5.3:12543118-12543137 MS.gene68043:CDS 40.0%
TGTATACCTTGAAGATCCCA+TGG - chr5.3:12541018-12541037 None:intergenic 40.0%
! TTTTGTACAGGAGGAAGGAT+GGG + chr5.3:12543014-12543033 MS.gene68043:intron 40.0%
!! TTTTCCATCAGTTTGGTGAG+AGG - chr5.3:12542278-12542297 None:intergenic 40.0%
!!! GGAGTGTTGTTGTCAAGTTT+TGG + chr5.3:12543486-12543505 MS.gene68043:CDS 40.0%
AACTCCAGCAACTTTGCAGT+CGG + chr5.3:12542595-12542614 MS.gene68043:intron 45.0%
ACTACCTCTCACCAAACTGA+TGG + chr5.3:12542271-12542290 MS.gene68043:intron 45.0%
ATGAAATGGCAGAGAGATGC+AGG + chr5.3:12541219-12541238 MS.gene68043:intron 45.0%
CAAGTTCTTCATCAGTTGGG+TGG - chr5.3:12540912-12540931 None:intergenic 45.0%
GGTATGAAGAGCAGAATGAG+TGG + chr5.3:12541246-12541265 MS.gene68043:CDS 45.0%
GTGCTTGGCCTCTTTACTAA+TGG - chr5.3:12543300-12543319 None:intergenic 45.0%
GTTACTGCAGCAGGGTAATA+GGG + chr5.3:12543545-12543564 MS.gene68043:CDS 45.0%
TAATAACCCTAGCTCGGACA+TGG + chr5.3:12543515-12543534 MS.gene68043:CDS 45.0%
TACAAAGGAAGAGCCCCTAA+TGG + chr5.3:12541416-12541435 MS.gene68043:CDS 45.0%
TGACCTAGATTCCCTACGTA+CGG + chr5.3:12542830-12542849 MS.gene68043:intron 45.0%
TGATGAAAATGGACCTCCAC+AGG + chr5.3:12541481-12541500 MS.gene68043:CDS 45.0%
TGTTACTGCAGCAGGGTAAT+AGG + chr5.3:12543544-12543563 MS.gene68043:CDS 45.0%
! CTGTTAGTTCTTGTCCCTGT+TGG - chr5.3:12541302-12541321 None:intergenic 45.0%
! GCATTGATGTTACTGCAGCA+GGG + chr5.3:12543537-12543556 MS.gene68043:CDS 45.0%
! GGTTGATTAGTTACCTGTGG+AGG - chr5.3:12541497-12541516 None:intergenic 45.0%
! GTTTGGTGAGAGGTAGTAGT+AGG - chr5.3:12542268-12542287 None:intergenic 45.0%
! GTTTTGTACAGGAGGAAGGA+TGG + chr5.3:12543013-12543032 MS.gene68043:intron 45.0%
ACTAACAGAGCTACCATGGC+TGG + chr5.3:12541314-12541333 MS.gene68043:CDS 50.0%
AGCTTTCCAAAACCCAGCCA+TGG - chr5.3:12541330-12541349 None:intergenic 50.0%
ATCAATGCCATGTCCGAGCT+AGG - chr5.3:12543525-12543544 None:intergenic 50.0%
ATGGCAGAGAGATGCAGGAT+CGG + chr5.3:12541224-12541243 MS.gene68043:intron 50.0%
CTAACAGAGCTACCATGGCT+GGG + chr5.3:12541315-12541334 MS.gene68043:CDS 50.0%
GTTTCCGACTGCAAAGTTGC+TGG - chr5.3:12542602-12542621 None:intergenic 50.0%
TCAATGCCATGTCCGAGCTA+GGG - chr5.3:12543524-12543543 None:intergenic 50.0%
TGACCGTACGTAGGGAATCT+AGG - chr5.3:12542836-12542855 None:intergenic 50.0%
!! GGCATTGATGTTACTGCAGC+AGG + chr5.3:12543536-12543555 MS.gene68043:CDS 50.0%
!!! GCTGGGTTTTGGAAAGCTAC+AGG + chr5.3:12541332-12541351 MS.gene68043:CDS 50.0%
ATGGAGTCATGTGTCCCACC+AGG + chr5.3:12540877-12540896 MS.gene68043:CDS 55.0%
CATGTGTCCCACCAGGGTTT+CGG + chr5.3:12540884-12540903 MS.gene68043:CDS 55.0%
TGGAGTCATGTGTCCCACCA+GGG + chr5.3:12540878-12540897 MS.gene68043:CDS 55.0%
TGGCAGAGAGATGCAGGATC+GGG + chr5.3:12541225-12541244 MS.gene68043:intron 55.0%
TGGTGGGACACATGACTCCA+TGG - chr5.3:12540878-12540897 None:intergenic 55.0%
! GAGCTACCATGGCTGGGTTT+TGG + chr5.3:12541321-12541340 MS.gene68043:CDS 55.0%
GGTGGAACCGAAACCCTGGT+GGG - chr5.3:12540894-12540913 None:intergenic 60.0%
GTTGGGTGGAACCGAAACCC+TGG - chr5.3:12540898-12540917 None:intergenic 60.0%
GGGTGGAACCGAAACCCTGG+TGG - chr5.3:12540895-12540914 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 12540868 12543647 12540868 ID=MS.gene68043
chr5.3 mRNA 12540868 12543647 12540868 ID=MS.gene68043.t1;Parent=MS.gene68043
chr5.3 exon 12540868 12541030 12540868 ID=MS.gene68043.t1.exon1;Parent=MS.gene68043.t1
chr5.3 CDS 12540868 12541030 12540868 ID=cds.MS.gene68043.t1;Parent=MS.gene68043.t1
chr5.3 exon 12541231 12541502 12541231 ID=MS.gene68043.t1.exon2;Parent=MS.gene68043.t1
chr5.3 CDS 12541231 12541502 12541231 ID=cds.MS.gene68043.t1;Parent=MS.gene68043.t1
chr5.3 exon 12543024 12543647 12543024 ID=MS.gene68043.t1.exon3;Parent=MS.gene68043.t1
chr5.3 CDS 12543024 12543647 12543024 ID=cds.MS.gene68043.t1;Parent=MS.gene68043.t1
Gene Sequence

>MS.gene68043

ATGGAGTCCATGGAGTCATGTGTCCCACCAGGGTTTCGGTTCCACCCAACTGATGAAGAACTTGTTGGCTATTATCTCAGAAAGAAAATTGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTTTATCGTATTGAACCATGGGATCTTCAAGGTATACACACATATACATACAAATACTTTTCTCCCCCTCTTTTCCCTAACAAAATATTAGGGTTTTGAAGATCTAATATATATGACCATATATAGTTGAAATGCAATTTAGAACTATGATAGTAATTAACCATGATTGATCTGTATTCATTTTTTGTTTTTGTCTATAAAAGTTAAATAATTATGTGAATGAAATGGCAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTTTTCAGCCATAAAGATAAAAAGTATCCAACAGGGACAAGAACTAACAGAGCTACCATGGCTGGGTTTTGGAAAGCTACAGGAAGAGATAAAGCAGTTTATGATAAGATGAAACTAATTGGGATGAGGAAGACTCTAGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATAGGCTTGAATCTGATGAAAATGGACCTCCACAGGTAACTAATCAACCATATAATACTTATATCCTTCTATTCCTAACATTATCATATATTTTTTCATAATAAATTCGAGTAGTTTTCAACTTTTAAATATTATCTTATAGAGTAGTTCTTGACTTATCTATGAAATGTCAAAGGTCACCTGAATGGTAAGAGTTTGATCTTATAATCTCAAGCGGCGGAGTTTAATTAAATTCTTTTGAAAACTATTAATTAAAAACCATGTATGTAACTACTAATTATATCTCAAATTAAAAATTTGTAAAATGATTATTTGTGTCATTTTAATAAAGAGTGTCCTCGTTAGTTTAGCTCAGTTGATAAAGACAATACATAATATATGTAAGGTCAGAGTTCAAATCCCGGCCATAAAAAAAAGAGTAGTTCACGACTTCATTCTCTTTTATTTTCTTTTTGCATTTTTCTATGTAGCCATGCTAGTTTGATCTTTATGTAGTTATTACTGTCTGGCTAGTGCTTCAATGTGATGTCACTGCTACTTATTCTAAATGCAGATCGTGCAAACTTTCTTTTCTCTGTTACTCACTTTCACTTTTTTCCTAGACCACTATAATCTAAATGTTCAACAAGGCACGTACACGCTTTCTTCAAACATAACAACAAGTCAAAAGTCATTTTTTCAACAGCTAATAATTAATCTTCTTTCATTCCCTTCCTTTTATGCTTACACACTTTTGTTTACATTTTGATTGTCAAAGGTAAACATCAATGCAATTAATTAGTTGACTACATATACAACCTACTACTACCTCTCACCAAACTGATGGAAAATTATGCAAAAGCAAAAGGGACAGCAAAACACATTAAAATAGAAAAAAATAAAAGCAAAAGGAGTAACTATTTTTTTCCTCTTTTGCAATATAAAGCAACTCTAGTCAACTCAAAGTCAAACCTAATACATATCAACAAAAGAAGATGACTGTGTCAACCGTCATTAACACATACAATTAACACTCTTTTTTAATGTACTCATTCATATTACTTGAACTTGAGTGTTGACTATGCCTCATAGTTACAGATAAACGGGTAGACCCAAAAAGACCTAAACTTTTATTCGTAATAAAAGTAAACTCCAGCAACTTTGCAGTCGGAAACATAGGTATTTTGGTCAAACTTTGTCATCAAACATTTTGTACTTTTCTCTGTACGTTTTCACTGCTTATTTATTCTTTTAAATCAGAATTGTTGTTCATACATAATTTTATACATCGTTCTGGAAATAAGTCTATTATAAATCTATAGAGACTCAAGTGAATCTCAACCAATAAAAAGATGGTGTGTGGAAAAATATTCTCAAAAGAAGTGACCTAGATTCCCTACGTACGGTCATAGAGAATTCCATAAACATACAATCAGTGCATTTGAGGCCGATCATTTTATTGACATTAGACGGTAGATTTGAAATTCGCTAAATATATTTATGCAGACACTATTTAATAGTAGAGAATCCATCTTTCCTCAAGTTTCATACTTAATTAAACTATATGTTTTGTACAGGAGGAAGGATGGGTAGTGTGTAGAGCATTTAAGAAAAGAACAACAAACAGCCAAAGTACAAAAAGTACTATTGAAGGATGGGACACAAGCTACTTCTATGAAGAAGCTGCAAGTAGGGTCAACAATTCCATTGTGGATCCAATTGATCAACTAATCTCAAGGCAACCTCAAAGCTATTTATCCCAAAGTTATAACATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTTTGCAGCTTCCTCAGCTTGAAAGTCCTTCATTGCCATTAGTAAAGAGGCCAAGCACAATGTCTCTAGTATCGGACAATAATAACGATGACATTAACGACCAAAACAGGTTGCTATTATTATCGAACAACAACGATAATATTACTACAAATACAGTTACTGATTGGAGAGCTCTTGATAAGTTTGTGGCTTCTCAACTGAGTCATGAAGTTGAAACTGATCAAGGAGTGTTGTTGTCAAGTTTTGGAACAAATAATAACCCTAGCTCGGACATGGCATTGATGTTACTGCAGCAGGGTAATAGGGATGAAGAGAACAAGTTAAGTCCATTTTTGAATGCAAGTTCAGATTGCAGTGATATTGGGATATGCGTATTTGAAAAATGA
Protein sequence

>MS.gene68043.t1

MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQSTKSTIEGWDTSYFYEEAASRVNNSIVDPIDQLISRQPQSYLSQSYNMCKQEIEACMHAEQFLQLPQLESPSLPLVKRPSTMSLVSDNNNDDINDQNRLLLLSNNNDNITTNTVTDWRALDKFVASQLSHEVETDQGVLLSSFGTNNNPSSDMALMLLQQGNRDEENKLSPFLNASSDCSDIGICVFEK