AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060490.t1 MTR_8g024480 97.018 436 6 2 1 431 1 434 0.0 884
MS.gene060490.t1 MTR_2g062730 75.000 168 30 2 11 177 6 162 6.04e-91 279
MS.gene060490.t1 MTR_4g036030 47.093 344 139 9 9 341 1 312 7.09e-91 279
MS.gene060490.t1 MTR_4g101680 47.605 334 132 8 9 333 1 300 6.21e-90 277
MS.gene060490.t1 MTR_4g035590 73.494 166 32 1 15 180 8 161 1.23e-88 273
MS.gene060490.t1 MTR_5g012080 43.700 373 135 10 9 361 1 318 7.00e-85 263
MS.gene060490.t1 MTR_5g021710 50.980 255 93 3 12 259 5 234 7.76e-85 263
MS.gene060490.t1 MTR_8g076110 50.781 256 109 5 12 267 3 241 6.33e-81 252
MS.gene060490.t1 MTR_1g096430 42.262 336 138 9 9 330 1 294 4.58e-75 238
MS.gene060490.t1 MTR_3g435150 53.714 175 69 4 3 175 2 166 4.90e-58 192
MS.gene060490.t1 MTR_4g108760 48.969 194 76 5 3 193 2 175 1.95e-57 193
MS.gene060490.t1 MTR_6g477900 47.126 174 82 2 15 188 6 169 8.40e-57 187
MS.gene060490.t1 MTR_3g070030 48.000 200 94 3 10 208 14 204 7.10e-56 188
MS.gene060490.t1 MTR_2g078700 52.096 167 68 4 13 177 21 177 8.52e-56 189
MS.gene060490.t1 MTR_5g041940 44.175 206 105 3 14 219 2 197 2.12e-55 184
MS.gene060490.t1 MTR_6g084430 52.174 161 63 2 15 175 5 151 2.61e-55 186
MS.gene060490.t1 MTR_4g081870 43.810 210 102 5 10 215 4 201 3.35e-55 184
MS.gene060490.t1 MTR_2g064090 49.102 167 76 3 15 181 6 163 4.77e-55 186
MS.gene060490.t1 MTR_6g012670 50.588 170 74 3 14 183 19 178 3.21e-54 183
MS.gene060490.t1 MTR_3g109340 49.711 173 72 3 5 175 12 171 5.21e-54 184
MS.gene060490.t1 MTR_7g011130 50.549 182 77 3 10 183 14 190 6.68e-54 183
MS.gene060490.t1 MTR_1g008740 48.108 185 78 5 12 192 10 180 9.19e-54 183
MS.gene060490.t1 MTR_3g109340 49.711 173 71 3 5 175 12 170 1.71e-53 182
MS.gene060490.t1 MTR_1g008740 48.108 185 78 5 12 192 24 194 1.82e-53 182
MS.gene060490.t1 MTR_3g064580 49.693 163 69 3 15 175 6 157 3.49e-53 189
MS.gene060490.t1 MTR_7g085260 49.444 180 77 4 15 190 17 186 5.13e-53 182
MS.gene060490.t1 MTR_2g064470 48.824 170 74 4 12 181 8 164 1.12e-52 179
MS.gene060490.t1 MTR_5g076850 49.693 163 68 3 15 175 6 156 4.82e-52 185
MS.gene060490.t1 MTR_7g085220 47.977 173 73 4 12 175 5 169 6.15e-52 178
MS.gene060490.t1 MTR_2g080010 40.889 225 114 7 12 228 12 225 6.20e-52 178
MS.gene060490.t1 MTR_2g079990 47.879 165 74 2 11 175 12 164 1.58e-51 177
MS.gene060490.t1 MTR_7g011120 52.353 170 74 3 10 177 3 167 2.21e-51 176
MS.gene060490.t1 MTR_6g032770 49.091 165 72 4 15 177 18 172 1.10e-50 176
MS.gene060490.t1 MTR_8g059170 48.780 164 74 3 12 175 11 164 1.38e-50 174
MS.gene060490.t1 MTR_6g011860 38.667 225 122 6 1 219 1 215 2.87e-50 175
MS.gene060490.t1 MTR_3g088110 45.304 181 89 3 14 194 6 176 3.69e-49 169
MS.gene060490.t1 MTR_8g467490 46.988 166 77 4 17 177 16 175 8.11e-49 171
MS.gene060490.t1 MTR_5g014300 45.789 190 77 6 11 191 2 174 1.00e-48 169
MS.gene060490.t1 MTR_2157s0010 44.186 172 90 2 10 178 3 171 1.48e-48 167
MS.gene060490.t1 MTR_2g079990 44.022 184 81 3 11 175 12 192 1.61e-48 170
MS.gene060490.t1 MTR_3g116070 57.143 133 49 4 15 143 23 151 2.07e-48 169
MS.gene060490.t1 MTR_3g096920 39.614 207 109 4 9 212 1 194 2.41e-48 167
MS.gene060490.t1 MTR_7g100990 46.951 164 77 3 14 175 10 165 4.23e-48 167
MS.gene060490.t1 MTR_2g093810 47.059 170 80 3 15 182 14 175 5.32e-48 167
MS.gene060490.t1 MTR_2g068880 45.402 174 86 4 9 175 15 186 2.34e-47 165
MS.gene060490.t1 MTR_4g089135 42.553 188 89 5 6 177 6 190 2.38e-47 166
MS.gene060490.t1 MTR_4g098630 45.055 182 83 4 13 189 4 173 4.76e-47 164
MS.gene060490.t1 MTR_7g005280 47.093 172 72 4 7 176 7 161 5.97e-47 162
MS.gene060490.t1 MTR_1g069805 44.848 165 73 3 13 175 8 156 8.80e-47 162
MS.gene060490.t1 MTR_5g040420 46.429 168 78 4 15 177 14 174 1.51e-46 165
MS.gene060490.t1 MTR_8g094580 43.750 176 82 4 9 180 1 163 2.67e-46 161
MS.gene060490.t1 MTR_3g096920 36.170 235 115 5 9 212 1 231 9.46e-46 161
MS.gene060490.t1 MTR_7g097090 44.785 163 72 3 13 173 8 154 1.33e-45 160
MS.gene060490.t1 MTR_5g069030 45.930 172 83 2 7 178 17 178 1.66e-45 167
MS.gene060490.t1 MTR_1g090720 43.850 187 96 4 17 203 44 221 2.25e-45 164
MS.gene060490.t1 MTR_3g070040 45.026 191 93 3 19 208 12 191 3.57e-45 160
MS.gene060490.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 2.80e-44 157
MS.gene060490.t1 MTR_2g068920 45.238 168 83 4 15 175 20 185 5.74e-44 155
MS.gene060490.t1 MTR_0036s0150 48.125 160 71 4 17 175 7 155 7.64e-44 161
MS.gene060490.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 1.01e-43 158
MS.gene060490.t1 MTR_1g090723 45.625 160 75 3 17 175 10 158 1.02e-43 161
MS.gene060490.t1 MTR_1g090723 46.250 160 75 3 17 175 10 159 1.17e-43 162
MS.gene060490.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 1.39e-43 158
MS.gene060490.t1 MTR_1g090723 45.625 160 75 3 17 175 10 158 1.44e-43 161
MS.gene060490.t1 MTR_3g096140 43.125 160 81 2 17 176 9 158 2.21e-43 153
MS.gene060490.t1 MTR_5g090970 43.293 164 87 2 15 175 18 178 2.44e-43 154
MS.gene060490.t1 MTR_3g093040 44.199 181 86 5 15 193 108 275 2.45e-43 154
MS.gene060490.t1 MTR_1g097300 49.231 130 65 1 17 146 21 149 5.76e-43 159
MS.gene060490.t1 MTR_4g075980 45.714 175 75 4 17 188 17 174 1.01e-42 152
MS.gene060490.t1 MTR_3g096140 43.125 160 81 2 17 176 9 158 1.28e-42 154
MS.gene060490.t1 MTR_3g093050 44.970 169 83 2 7 175 14 172 2.02e-42 158
MS.gene060490.t1 MTR_5g090970 43.293 164 86 2 15 175 18 177 2.29e-42 152
MS.gene060490.t1 MTR_3g093050 44.970 169 83 2 7 175 14 172 3.12e-42 157
MS.gene060490.t1 MTR_8g093580 42.945 163 77 3 17 176 8 157 9.65e-42 154
MS.gene060490.t1 MTR_4g134460 42.593 162 78 3 15 175 54 201 9.52e-41 150
MS.gene060490.t1 MTR_2g086880 45.333 150 73 2 5 147 1 148 1.45e-39 149
MS.gene060490.t1 MTR_2g086880 45.333 150 73 2 5 147 1 148 2.93e-39 149
MS.gene060490.t1 MTR_3g098810 40.449 178 94 3 3 176 2 171 8.36e-39 140
MS.gene060490.t1 MTR_8g099750 41.899 179 87 5 3 176 2 168 1.21e-38 139
MS.gene060490.t1 MTR_3g098810 40.625 160 84 3 3 157 2 155 6.53e-35 127
MS.gene060490.t1 MTR_3g096140 40.411 146 77 2 31 176 2 137 6.71e-34 129
MS.gene060490.t1 MTR_4g052620 38.172 186 100 6 16 195 6 182 3.77e-33 125
MS.gene060490.t1 MTR_2g086690 39.665 179 84 8 16 183 5 170 1.04e-32 124
MS.gene060490.t1 MTR_8g023840 32.188 320 163 14 15 310 11 300 2.23e-31 124
MS.gene060490.t1 MTR_4g094302 37.423 163 86 4 15 175 11 159 4.77e-29 112
MS.gene060490.t1 MTR_7g105170 35.829 187 108 5 15 195 4 184 1.83e-28 113
MS.gene060490.t1 MTR_8g023860 40.123 162 78 6 14 172 11 156 4.97e-28 115
MS.gene060490.t1 MTR_8g094580 46.491 114 47 3 71 180 6 109 1.31e-27 110
MS.gene060490.t1 MTR_4g094302 40.458 131 65 3 15 143 11 130 1.19e-26 105
MS.gene060490.t1 MTR_8g023900 38.587 184 91 8 18 195 196 363 1.09e-25 109
MS.gene060490.t1 MTR_8g023900 37.870 169 78 7 15 175 12 161 2.47e-25 108
MS.gene060490.t1 MTR_8g023930 31.126 302 150 14 15 288 24 295 1.20e-24 106
MS.gene060490.t1 MTR_7g070140 53.247 77 34 1 75 149 21 97 2.21e-22 92.8
MS.gene060490.t1 MTR_8g023880 34.254 181 80 8 13 175 5 164 1.90e-20 90.9
MS.gene060490.t1 MTR_3g096400 32.934 167 94 7 14 174 6 160 2.61e-18 83.6
MS.gene060490.t1 MTR_8g093790 30.723 166 83 7 14 179 9 142 7.89e-18 81.6
MS.gene060490.t1 MTR_7g070150 50.820 61 18 1 115 175 9 57 2.07e-15 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060490.t1 AT2G46770 52.262 442 120 11 1 430 2 364 8.26e-137 397
MS.gene060490.t1 AT3G61910 46.572 423 129 10 5 420 1 333 1.83e-112 333
MS.gene060490.t1 AT1G32770 50.000 346 115 8 1 333 1 301 1.30e-103 312
MS.gene060490.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.12e-90 278
MS.gene060490.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.12e-90 278
MS.gene060490.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.12e-90 278
MS.gene060490.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.12e-90 278
MS.gene060490.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.12e-90 278
MS.gene060490.t1 AT4G10350 68.132 182 47 2 5 186 1 171 5.61e-88 271
MS.gene060490.t1 AT2G18060 44.675 338 133 9 15 337 9 307 1.12e-87 271
MS.gene060490.t1 AT2G18060 44.675 338 133 9 15 337 9 307 1.12e-87 271
MS.gene060490.t1 AT4G36160 45.455 341 145 8 8 338 3 312 4.78e-87 270
MS.gene060490.t1 AT4G36160 45.455 341 145 8 8 338 3 312 4.78e-87 270
MS.gene060490.t1 AT4G36160 45.455 341 145 8 8 338 7 316 6.99e-87 270
MS.gene060490.t1 AT1G33280 69.461 167 39 1 15 181 8 162 7.00e-86 265
MS.gene060490.t1 AT1G12260 41.148 418 174 12 9 384 1 388 6.29e-85 265
MS.gene060490.t1 AT1G62700 41.602 387 170 7 9 362 1 364 3.44e-82 258
MS.gene060490.t1 AT1G62700 41.602 387 170 7 9 362 1 364 3.44e-82 258
MS.gene060490.t1 AT1G12260 69.412 170 37 2 9 176 1 157 5.68e-82 256
MS.gene060490.t1 AT5G66300 40.678 354 115 10 5 332 2 286 2.69e-81 252
MS.gene060490.t1 AT5G62380 41.691 343 122 9 13 332 5 292 3.68e-76 241
MS.gene060490.t1 AT5G62380 41.691 343 122 9 13 332 5 292 3.68e-76 241
MS.gene060490.t1 AT1G71930 65.854 164 45 1 12 175 6 158 7.72e-76 239
MS.gene060490.t1 AT1G71930 65.854 164 45 1 12 175 6 158 7.72e-76 239
MS.gene060490.t1 AT3G18400 54.118 170 63 3 12 180 2 157 1.82e-59 197
MS.gene060490.t1 AT3G17730 50.000 172 72 3 15 184 6 165 7.23e-58 190
MS.gene060490.t1 AT1G69490 48.066 181 86 2 7 187 1 173 1.15e-56 188
MS.gene060490.t1 AT5G07680 53.659 164 66 3 12 175 14 167 2.93e-56 189
MS.gene060490.t1 AT5G07680 54.037 161 64 3 15 175 3 153 4.53e-56 188
MS.gene060490.t1 AT2G24430 51.205 166 66 3 12 175 13 165 5.69e-56 187
MS.gene060490.t1 AT2G24430 51.205 166 66 3 12 175 13 165 5.69e-56 187
MS.gene060490.t1 AT3G04070 48.913 184 82 5 7 185 2 178 1.22e-55 187
MS.gene060490.t1 AT4G10350 66.142 127 34 1 60 186 7 124 2.04e-55 186
MS.gene060490.t1 AT5G61430 52.439 164 68 3 12 175 13 166 5.44e-55 186
MS.gene060490.t1 AT5G39610 52.469 162 67 3 15 176 20 171 6.09e-55 184
MS.gene060490.t1 AT3G04070 47.475 198 80 6 7 185 2 194 2.12e-54 185
MS.gene060490.t1 AT3G15170 53.374 163 64 4 12 172 17 169 7.58e-54 182
MS.gene060490.t1 AT1G76420 50.307 163 66 3 15 175 22 171 1.04e-53 182
MS.gene060490.t1 AT5G17260 45.055 182 88 3 15 196 6 175 1.10e-53 186
MS.gene060490.t1 AT3G03200 38.843 242 115 5 15 235 6 235 1.14e-53 186
MS.gene060490.t1 AT3G12977 47.674 172 79 2 12 183 15 175 2.47e-53 179
MS.gene060490.t1 AT1G65910 48.466 163 70 3 15 175 6 156 1.38e-52 186
MS.gene060490.t1 AT4G27410 49.390 164 71 3 12 175 11 162 2.11e-52 178
MS.gene060490.t1 AT3G29035 60.000 130 49 1 15 144 24 150 3.25e-52 178
MS.gene060490.t1 AT5G53950 51.786 168 68 5 11 175 12 169 5.75e-52 179
MS.gene060490.t1 AT5G18270 50.000 164 71 4 15 177 21 174 1.12e-51 177
MS.gene060490.t1 AT1G54330 52.761 163 60 4 15 175 6 153 1.14e-51 176
MS.gene060490.t1 AT1G56010 49.091 165 74 3 12 175 16 171 1.49e-51 176
MS.gene060490.t1 AT5G18270 49.390 164 72 4 15 177 21 174 2.11e-51 176
MS.gene060490.t1 AT5G46590 51.149 174 70 5 11 181 2 163 3.88e-51 174
MS.gene060490.t1 AT3G04060 50.617 162 69 4 15 175 20 171 2.31e-50 174
MS.gene060490.t1 AT1G61110 45.562 169 85 3 11 175 12 177 6.25e-50 172
MS.gene060490.t1 AT5G46590 55.263 152 61 4 11 158 2 150 1.17e-49 170
MS.gene060490.t1 AT4G27410 45.506 178 74 3 12 175 11 179 9.04e-49 169
MS.gene060490.t1 AT3G15500 46.667 165 76 3 12 176 11 163 1.07e-48 169
MS.gene060490.t1 AT5G63790 44.199 181 91 4 9 188 54 225 3.25e-48 167
MS.gene060490.t1 AT5G63790 45.665 173 84 4 9 180 44 207 3.37e-48 167
MS.gene060490.t1 AT1G52890 45.783 166 78 3 12 177 11 164 6.41e-48 167
MS.gene060490.t1 AT2G43000 47.170 159 73 2 17 175 20 167 1.94e-47 164
MS.gene060490.t1 AT3G10490 44.615 195 90 6 13 204 25 204 2.08e-47 163
MS.gene060490.t1 AT1G77450 41.538 195 102 4 14 208 9 191 2.25e-47 163
MS.gene060490.t1 AT5G13180 45.455 176 78 4 3 176 2 161 3.10e-47 163
MS.gene060490.t1 AT5G04410 46.626 163 77 2 13 175 7 159 3.30e-47 171
MS.gene060490.t1 AT3G10500 46.012 163 78 2 13 175 7 159 4.10e-47 170
MS.gene060490.t1 AT5G08790 46.707 167 79 4 15 180 7 164 5.47e-47 163
MS.gene060490.t1 AT3G10480 48.538 171 74 4 17 187 29 185 5.59e-47 167
MS.gene060490.t1 AT1G26870 46.012 163 83 2 17 177 18 177 5.88e-47 167
MS.gene060490.t1 AT5G39820 41.799 189 77 4 15 181 20 197 8.11e-47 164
MS.gene060490.t1 AT2G33480 44.318 176 83 2 1 176 1 161 9.00e-47 162
MS.gene060490.t1 AT3G10480 48.538 171 75 5 17 187 29 186 1.06e-46 167
MS.gene060490.t1 AT3G15510 45.562 169 85 4 19 183 21 186 1.65e-46 164
MS.gene060490.t1 AT3G10490 45.550 191 86 6 17 204 29 204 3.02e-46 166
MS.gene060490.t1 AT1G01720 46.012 163 79 3 14 176 6 159 3.60e-46 161
MS.gene060490.t1 AT4G17980 46.512 172 72 5 11 175 2 160 7.74e-46 159
MS.gene060490.t1 AT1G33060 43.005 193 81 4 15 207 24 187 1.35e-45 167
MS.gene060490.t1 AT1G33060 43.005 193 81 4 15 207 24 187 1.39e-45 167
MS.gene060490.t1 AT2G33480 44.318 176 81 3 1 176 1 159 1.45e-45 159
MS.gene060490.t1 AT4G17980 46.512 172 72 5 11 175 2 160 2.01e-45 159
MS.gene060490.t1 AT1G32510 45.143 175 76 5 13 178 4 167 3.30e-45 158
MS.gene060490.t1 AT5G24590 43.889 180 90 3 7 185 5 174 4.93e-45 162
MS.gene060490.t1 AT4G35580 46.012 163 78 2 15 177 9 161 4.63e-44 161
MS.gene060490.t1 AT4G35580 46.012 163 78 2 15 177 9 161 5.06e-44 161
MS.gene060490.t1 AT4G35580 46.012 163 78 2 15 177 9 161 5.36e-44 161
MS.gene060490.t1 AT3G49530 44.000 175 85 5 4 176 2 165 6.53e-43 155
MS.gene060490.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.22e-43 157
MS.gene060490.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.22e-43 157
MS.gene060490.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.22e-43 157
MS.gene060490.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.22e-43 157
MS.gene060490.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.22e-43 157
MS.gene060490.t1 AT3G49530 44.000 175 85 5 4 176 2 165 1.08e-42 156
MS.gene060490.t1 AT1G52880 47.239 163 78 3 19 177 21 179 2.87e-42 152
MS.gene060490.t1 AT2G02450 40.206 194 100 4 15 206 51 230 3.10e-42 153
MS.gene060490.t1 AT5G64060 41.212 165 87 2 11 175 2 156 3.84e-42 152
MS.gene060490.t1 AT3G10480 40.930 215 80 7 6 187 19 219 4.62e-42 155
MS.gene060490.t1 AT2G02450 40.206 194 100 4 15 206 51 230 5.76e-42 153
MS.gene060490.t1 AT1G34180 47.287 129 67 1 17 145 18 145 5.22e-41 151
MS.gene060490.t1 AT1G34190 46.154 130 69 1 17 146 18 146 9.26e-41 152
MS.gene060490.t1 AT4G28530 41.209 182 71 5 13 175 8 172 1.10e-40 148
MS.gene060490.t1 AT1G34180 47.287 129 67 1 17 145 18 145 1.47e-40 152
MS.gene060490.t1 AT2G27300 40.000 170 81 3 5 174 7 155 4.24e-40 146
MS.gene060490.t1 AT2G17040 41.765 170 79 4 17 183 8 160 6.19e-40 144
MS.gene060490.t1 AT1G34180 44.286 140 67 1 17 145 18 157 9.95e-40 148
MS.gene060490.t1 AT1G34180 44.286 140 67 1 17 145 18 157 2.12e-39 149
MS.gene060490.t1 AT5G22290 38.554 166 85 2 13 178 19 167 1.60e-37 139
MS.gene060490.t1 AT3G12910 43.750 176 69 7 17 175 23 185 7.40e-37 137
MS.gene060490.t1 AT5G04395 46.622 148 66 3 12 146 25 172 1.35e-36 132
MS.gene060490.t1 AT1G56010 55.340 103 40 1 73 175 8 104 1.37e-35 132
MS.gene060490.t1 AT3G12977 47.581 124 54 2 60 183 10 122 4.17e-35 130
MS.gene060490.t1 AT5G61430 54.286 105 41 2 71 175 6 103 7.19e-35 130
MS.gene060490.t1 AT3G44290 42.400 125 70 1 17 141 16 138 1.19e-34 129
MS.gene060490.t1 AT3G44290 42.400 125 70 1 17 141 16 138 6.09e-34 130
MS.gene060490.t1 AT1G32870 39.884 173 89 5 5 175 1 160 2.07e-33 132
MS.gene060490.t1 AT1G32870 39.884 173 89 5 5 175 1 160 2.24e-33 132
MS.gene060490.t1 AT2G18060 34.630 257 114 9 96 337 2 219 2.72e-33 126
MS.gene060490.t1 AT1G32870 39.884 173 89 5 5 175 37 196 3.80e-33 131
MS.gene060490.t1 AT2G33480 46.226 106 48 1 71 176 8 104 7.36e-28 110
MS.gene060490.t1 AT5G22380 38.776 147 80 5 14 153 4 147 1.34e-24 102
MS.gene060490.t1 AT3G44350 34.302 172 96 7 18 183 8 168 3.72e-24 100
MS.gene060490.t1 AT5G64530 34.524 168 88 6 15 175 3 155 4.10e-24 99.4
MS.gene060490.t1 AT5G64530 40.602 133 62 5 15 145 3 120 1.83e-23 96.7
MS.gene060490.t1 AT3G44350 38.571 140 77 5 18 151 8 144 2.74e-23 96.3
MS.gene060490.t1 AT4G28530 39.552 134 58 4 13 127 8 137 5.61e-23 99.4
MS.gene060490.t1 AT3G04420 40.152 132 68 3 16 141 4 130 5.68e-23 98.6
MS.gene060490.t1 AT1G02230 42.222 135 61 6 16 141 4 130 8.22e-23 99.4
MS.gene060490.t1 AT3G04420 40.152 132 68 3 16 141 4 130 1.33e-22 98.6
MS.gene060490.t1 AT2G43000 45.833 96 44 1 80 175 2 89 2.76e-22 94.4
MS.gene060490.t1 AT4G01520 35.606 132 81 2 16 143 5 136 2.09e-21 94.4
MS.gene060490.t1 AT4G01540 36.641 131 77 3 18 143 7 136 2.62e-21 95.9
MS.gene060490.t1 AT4G01540 36.641 131 77 3 18 143 7 136 4.62e-21 94.7
MS.gene060490.t1 AT4G01540 36.641 131 77 3 18 143 7 136 4.97e-21 95.5
MS.gene060490.t1 AT1G02250 41.667 132 66 6 16 141 4 130 6.21e-21 94.0
MS.gene060490.t1 AT4G01540 36.641 131 77 3 18 143 7 136 6.30e-21 94.7
MS.gene060490.t1 AT4G01550 37.692 130 76 3 18 143 7 135 2.28e-20 93.6
MS.gene060490.t1 AT3G10490 42.735 117 50 5 91 204 2 104 2.12e-19 89.4
MS.gene060490.t1 AT3G10490 42.735 117 50 5 91 204 2 104 2.12e-19 89.4
MS.gene060490.t1 AT1G02220 36.025 161 84 6 14 165 2 152 2.21e-19 90.1
MS.gene060490.t1 AT5G50820 33.099 142 79 5 7 143 8 138 3.96e-17 79.7
MS.gene060490.t1 AT5G14000 33.094 139 86 2 7 143 7 140 6.41e-17 78.2
MS.gene060490.t1 AT1G01010 36.496 137 74 6 18 144 6 139 2.10e-16 81.3
MS.gene060490.t1 AT5G14000 33.094 139 86 2 7 143 7 140 2.48e-16 77.8
MS.gene060490.t1 AT5G22290 37.805 82 36 1 97 178 2 68 2.93e-13 69.7
MS.gene060490.t1 AT3G56530 27.848 158 110 2 3 158 40 195 3.97e-13 70.5
MS.gene060490.t1 AT3G04430 35.075 134 70 6 21 141 6 135 1.67e-11 63.5

Find 104 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCATGCTTGTTGATTT+TGG 0.074213 8.1:+75879338 None:intergenic
GCAAATTACAATAATAATTA+TGG 0.234766 8.1:-75879449 MS.gene060490:CDS
AAGTTGATGATGATGATTTA+AGG 0.268850 8.1:+75879024 None:intergenic
CTCAAGTTCCTCCTGGATTC+CGG 0.279380 8.1:-75880395 MS.gene060490:CDS
GCGCTACAGCCGCAGGGTTC+TGG 0.282580 8.1:-75879969 MS.gene060490:CDS
AACATGAGCATATCTGTTAA+TGG 0.305797 8.1:-75880423 MS.gene060490:CDS
ATGGACAAACTGAGGCTTCT+AGG 0.319602 8.1:-75879115 MS.gene060490:CDS
TTTGTAGAGAAATGCAAAAT+AGG 0.328623 8.1:-75880066 MS.gene060490:intron
AGCGCGATTGGTTCGTGTTC+CGG 0.335099 8.1:+75879987 None:intergenic
TTATATATAGCAATGGAAAA+AGG 0.350881 8.1:-75879924 MS.gene060490:CDS
GTGATGGTGGTCTTACTAAT+TGG 0.352073 8.1:-75879172 MS.gene060490:CDS
ACAGATATGCTCATGTTATC+AGG 0.354451 8.1:+75880429 None:intergenic
CCTCTCCAGAAGGGCTGTCT+AGG 0.360170 8.1:+75879570 None:intergenic
TCTTACTAATTGGGTAGCTT+TGG 0.361121 8.1:-75879162 MS.gene060490:CDS
TGCAATTATTCAAGTAGATA+TGG 0.369279 8.1:-75879288 MS.gene060490:CDS
GGAGCAAATACTTCAACAAA+TGG 0.371761 8.1:-75879501 MS.gene060490:CDS
CTTGTTGCTTCTCAATTGAA+TGG 0.385288 8.1:-75879134 MS.gene060490:CDS
TTGGATACTTCTTGTCTTTG+TGG 0.389435 8.1:+75880010 None:intergenic
AAAACCCTAGACAGCCCTTC+TGG 0.397489 8.1:-75879575 MS.gene060490:CDS
AACTGAGGCTTCTAGGCAAT+TGG 0.397982 8.1:-75879108 MS.gene060490:CDS
GATGATGATGATGCCTCTAA+TGG 0.411646 8.1:+75879212 None:intergenic
CTTCTTCAGTTGGATGAAAC+CGG 0.420245 8.1:+75880376 None:intergenic
TACTTGTGATGAAGGAGCTT+TGG 0.423237 8.1:-75879522 MS.gene060490:CDS
TGCTTTAATGACCCCACAAT+GGG 0.424079 8.1:-75879083 MS.gene060490:CDS
ACTTACCAGATTGGTGTCAT+TGG 0.428069 8.1:+75879801 None:intergenic
CATGGTTAATAATCCATTAG+AGG 0.428212 8.1:-75879225 MS.gene060490:CDS
GTATCTAATACTTACCAGAT+TGG 0.444383 8.1:+75879792 None:intergenic
CCCTGCGGCTGTAGCGCGAT+TGG 0.449718 8.1:+75879975 None:intergenic
CTTCTTCTTCCCTCTCCAGA+AGG 0.463749 8.1:+75879560 None:intergenic
TGAAGAAGCTCTTCTTCAGT+TGG 0.465783 8.1:+75880366 None:intergenic
CACCACCAATGACACCAATC+TGG 0.467050 8.1:-75879806 MS.gene060490:intron
TGATGGTGGTCTTACTAATT+GGG 0.469019 8.1:-75879171 MS.gene060490:CDS
GAACAACTCCACAAAATGAT+TGG 0.470282 8.1:-75880044 MS.gene060490:CDS
ACCAATCGCGCTACAGCCGC+AGG 0.471757 8.1:-75879976 MS.gene060490:CDS
AACAATGAGAACAACAATGA+TGG 0.475096 8.1:-75879317 MS.gene060490:CDS
AGTTGATGATGATGATTTAA+GGG 0.477571 8.1:+75879025 None:intergenic
TTCTTCTTCCCTCTCCAGAA+GGG 0.478150 8.1:+75879561 None:intergenic
CTAATTGGGTAGCTTTGGAT+AGG 0.478615 8.1:-75879157 MS.gene060490:CDS
ATGGTGGTCAAGAAGAAGGA+TGG 0.479948 8.1:-75879634 MS.gene060490:CDS
GGACAATCTCAAGTTCCTCC+TGG 0.485001 8.1:-75880402 MS.gene060490:CDS
CTCTCCAGAAGGGCTGTCTA+GGG 0.487859 8.1:+75879571 None:intergenic
GTTGGATGAAACCGGAATCC+AGG 0.489389 8.1:+75880384 None:intergenic
CTTGAACCATGGGACATTCA+AGG 0.497760 8.1:-75880270 MS.gene060490:intron
AAGAAGGATGGGTGGTGTGT+AGG 0.502710 8.1:-75879622 MS.gene060490:CDS
GAGCAAATACTTCAACAAAT+GGG 0.518882 8.1:-75879500 MS.gene060490:CDS
TACAAAGGTCGTGCTCCTCA+TGG 0.519789 8.1:-75879874 MS.gene060490:CDS
TTAGTGCAATATCCCATTGT+GGG 0.521916 8.1:+75879071 None:intergenic
CGATTGGTTCGTGTTCCGGT+TGG 0.532825 8.1:+75879991 None:intergenic
ATATATAACTTTGTCACGAC+CGG 0.533759 8.1:+75879939 None:intergenic
TACCAGATTGGTGTCATTGG+TGG 0.534532 8.1:+75879804 None:intergenic
GTTCCAGAGGTCAATCTCAC+TGG 0.538763 8.1:+75878911 None:intergenic
GGTGATGGTGGTCAAGAAGA+AGG 0.538922 8.1:-75879638 MS.gene060490:CDS
CACAAGTATCATACAAGTGA+TGG 0.540165 8.1:+75879537 None:intergenic
AGAGGCATCATCATCATCAA+TGG 0.541656 8.1:-75879207 MS.gene060490:CDS
CTAGACAGCCCTTCTGGAGA+GGG 0.547964 8.1:-75879569 MS.gene060490:CDS
AGCTTCTTCAATACTACTTG+AGG 0.548206 8.1:-75880353 MS.gene060490:CDS
AAAGACAAGAAGTATCCAAC+CGG 0.551006 8.1:-75880006 MS.gene060490:CDS
GATATGGCTAATGAAAATGA+AGG 0.553711 8.1:-75879272 MS.gene060490:CDS
ATTACAATAATAATTATGGA+AGG 0.553899 8.1:-75879445 MS.gene060490:CDS
ATAATTATGGAAGGTTTGCA+AGG 0.557854 8.1:-75879436 MS.gene060490:CDS
CTCTGATCATCATCATAACA+TGG 0.564367 8.1:-75879243 MS.gene060490:CDS
GACAAAGTTATATATAGCAA+TGG 0.565094 8.1:-75879931 MS.gene060490:CDS
TTGTTGAGAGTAGATTCAAA+AGG 0.565100 8.1:+75879413 None:intergenic
ATCTCAACAAGCTTGAACCA+TGG 0.570034 8.1:-75880281 MS.gene060490:CDS
GAGTCCAAAATCAACAAGCA+TGG 0.570658 8.1:-75879342 MS.gene060490:CDS
TTGTATGATACTTGTGATGA+AGG 0.576333 8.1:-75879530 MS.gene060490:CDS
TATCTACTTGAATAATTGCA+TGG 0.578399 8.1:+75879291 None:intergenic
GATGATGATGATTTAAGGGT+GGG 0.578828 8.1:+75879029 None:intergenic
TGGTGGTCAAGAAGAAGGAT+GGG 0.580328 8.1:-75879633 MS.gene060490:CDS
ATATTACCTTGAATGTCCCA+TGG 0.582876 8.1:+75880264 None:intergenic
ACAATGAGAACAACAATGAT+GGG 0.583551 8.1:-75879316 MS.gene060490:CDS
TCTCAACAAGCTTGAACCAT+GGG 0.584241 8.1:-75880280 MS.gene060490:CDS
ACAAATGGGAAGGGGTTGCA+AGG 0.584361 8.1:-75879486 MS.gene060490:CDS
ATGGTGGTTATAATAATGAA+AGG 0.589878 8.1:-75879388 MS.gene060490:CDS
AAATACTTCAACAAATGGGA+AGG 0.591385 8.1:-75879496 MS.gene060490:CDS
TCAATTGAATGGACAAACTG+AGG 0.592361 8.1:-75879123 MS.gene060490:CDS
AATACTTCAACAAATGGGAA+GGG 0.596086 8.1:-75879495 MS.gene060490:CDS
ATGCCAGTGAGATTGACCTC+TGG 0.596304 8.1:-75878914 MS.gene060490:CDS
CCTAGACAGCCCTTCTGGAG+AGG 0.596746 8.1:-75879570 MS.gene060490:CDS
ATTAGTGCAATATCCCATTG+TGG 0.600538 8.1:+75879070 None:intergenic
GAATCTACTCTCAACAACAA+TGG 0.604976 8.1:-75879407 MS.gene060490:CDS
TTGCTTTAATGACCCCACAA+TGG 0.606154 8.1:-75879084 MS.gene060490:CDS
CAACATCACGAATAACATCA+AGG 0.607029 8.1:+75880304 None:intergenic
GCAGGGTTCTGGAAAGCCAC+CGG 0.607542 8.1:-75879958 MS.gene060490:CDS
ATACTTCAACAAATGGGAAG+GGG 0.611109 8.1:-75879494 MS.gene060490:CDS
TGATGATGATGATTTAAGGG+TGG 0.618237 8.1:+75879028 None:intergenic
TATAACTTTGTCACGACCGG+TGG 0.623261 8.1:+75879942 None:intergenic
GTGTCGAATATGATTGGTGA+TGG 0.624396 8.1:-75879653 MS.gene060490:CDS
CTCACTGGCATAGTCATGTG+AGG 0.627225 8.1:+75878926 None:intergenic
ATGGTGATAGCATGTGGTGA+TGG 0.628336 8.1:-75879188 MS.gene060490:CDS
TCGAATATGATTGGTGATGG+TGG 0.634462 8.1:-75879650 MS.gene060490:CDS
GTGATAGCATGTGGTGATGG+TGG 0.637758 8.1:-75879185 MS.gene060490:CDS
TCACTGGCATAGTCATGTGA+GGG 0.651790 8.1:+75878927 None:intergenic
CCAATCGCGCTACAGCCGCA+GGG 0.651911 8.1:-75879975 MS.gene060490:CDS
TCTACTCTCAACAACAATGG+TGG 0.656048 8.1:-75879404 MS.gene060490:CDS
TGGTCAAGAAGAAGGATGGG+TGG 0.660445 8.1:-75879630 MS.gene060490:CDS
ATATGGCTAATGAAAATGAA+GGG 0.670014 8.1:-75879271 MS.gene060490:CDS
TTGATCGAGCAAAGTTCCAG+AGG 0.677993 8.1:+75878898 None:intergenic
TAGTGCAATATCCCATTGTG+GGG 0.681689 8.1:+75879072 None:intergenic
GGATGAAACCGGAATCCAGG+AGG 0.718093 8.1:+75880387 None:intergenic
TCATCAATGGTGATAGCATG+TGG 0.720641 8.1:-75879194 MS.gene060490:CDS
GTATTCGACACGTGACACAG+TGG 0.748440 8.1:+75878849 None:intergenic
GGTGGCTTTCCAGAACCCTG+CGG 0.771672 8.1:+75879960 None:intergenic
TTCAGAAGATGACAACAACG+AGG 0.812789 8.1:+75878872 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTATATAGTAAATAAAT+TGG - chr8.1:75879561-75879580 MS.gene060490:CDS 10.0%
!! ATGAATGAAGAAATAAATAA+AGG + chr8.1:75879054-75879073 None:intergenic 15.0%
!! ATTACAATAATAATTATGGA+AGG - chr8.1:75879826-75879845 MS.gene060490:CDS 15.0%
!! GCAAATTACAATAATAATTA+TGG - chr8.1:75879822-75879841 MS.gene060490:CDS 15.0%
!! TAAATCAAAGGAATAAAGAA+AGG + chr8.1:75879103-75879122 None:intergenic 20.0%
!! TTATATATAGCAATGGAAAA+AGG - chr8.1:75879347-75879366 MS.gene060490:CDS 20.0%
! ATATGGCTAATGAAAATGAA+GGG - chr8.1:75880000-75880019 MS.gene060490:CDS 25.0%
! ATGGTGGTTATAATAATGAA+AGG - chr8.1:75879883-75879902 MS.gene060490:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG - chr8.1:75879493-75879512 MS.gene060490:CDS 25.0%
! CACTTGAAGAAATAAATCAA+AGG + chr8.1:75879115-75879134 None:intergenic 25.0%
! GACAAAGTTATATATAGCAA+TGG - chr8.1:75879340-75879359 MS.gene060490:CDS 25.0%
! GGAAGACAAAAAATATATAC+TGG - chr8.1:75879134-75879153 MS.gene060490:CDS 25.0%
! TATCTACTTGAATAATTGCA+TGG + chr8.1:75879983-75880002 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+TGG - chr8.1:75879983-75880002 MS.gene060490:CDS 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG - chr8.1:75879205-75879224 MS.gene060490:CDS 25.0%
!! CTTTATTGCGACAAAATTTT+AGG - chr8.1:75879596-75879615 MS.gene060490:CDS 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG - chr8.1:75879113-75879132 MS.gene060490:CDS 25.0%
!!! AAGTTGATGATGATGATTTA+AGG + chr8.1:75880250-75880269 None:intergenic 25.0%
!!! AGTTGATGATGATGATTTAA+GGG + chr8.1:75880249-75880268 None:intergenic 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG - chr8.1:75879163-75879182 MS.gene060490:CDS 25.0%
AAATACTTCAACAAATGGGA+AGG - chr8.1:75879775-75879794 MS.gene060490:intron 30.0%
AACAATGAGAACAACAATGA+TGG - chr8.1:75879954-75879973 MS.gene060490:CDS 30.0%
AACATGAGCATATCTGTTAA+TGG - chr8.1:75878848-75878867 MS.gene060490:CDS 30.0%
AATACTTCAACAAATGGGAA+GGG - chr8.1:75879776-75879795 MS.gene060490:intron 30.0%
ACAATGAGAACAACAATGAT+GGG - chr8.1:75879955-75879974 MS.gene060490:CDS 30.0%
ATAATTATGGAAGGTTTGCA+AGG - chr8.1:75879835-75879854 MS.gene060490:CDS 30.0%
ATATATAACTTTGTCACGAC+CGG + chr8.1:75879335-75879354 None:intergenic 30.0%
CATGGTTAATAATCCATTAG+AGG - chr8.1:75880046-75880065 MS.gene060490:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG - chr8.1:75879771-75879790 MS.gene060490:intron 30.0%
GATATGGCTAATGAAAATGA+AGG - chr8.1:75879999-75880018 MS.gene060490:CDS 30.0%
GTATCTAATACTTACCAGAT+TGG + chr8.1:75879482-75879501 None:intergenic 30.0%
TATAGCAATGGAAAAAGGAT+TGG - chr8.1:75879352-75879371 MS.gene060490:CDS 30.0%
TTGTATGATACTTGTGATGA+AGG - chr8.1:75879741-75879760 MS.gene060490:intron 30.0%
TTGTTGAGAGTAGATTCAAA+AGG + chr8.1:75879861-75879880 None:intergenic 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG + chr8.1:75879238-75879257 None:intergenic 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG - chr8.1:75879382-75879401 MS.gene060490:CDS 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG - chr8.1:75879612-75879631 MS.gene060490:CDS 30.0%
ACAGATATGCTCATGTTATC+AGG + chr8.1:75878845-75878864 None:intergenic 35.0%
AGCTTCTTCAATACTACTTG+AGG - chr8.1:75878918-75878937 MS.gene060490:CDS 35.0%
ATACTTCAACAAATGGGAAG+GGG - chr8.1:75879777-75879796 MS.gene060490:intron 35.0%
ATATTACCTTGAATGTCCCA+TGG + chr8.1:75879010-75879029 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG + chr8.1:75880204-75880223 None:intergenic 35.0%
CAACATCACGAATAACATCA+AGG + chr8.1:75878970-75878989 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG + chr8.1:75879737-75879756 None:intergenic 35.0%
CTCTGATCATCATCATAACA+TGG - chr8.1:75880028-75880047 MS.gene060490:CDS 35.0%
GAACAACTCCACAAAATGAT+TGG - chr8.1:75879227-75879246 MS.gene060490:CDS 35.0%
GAATCTACTCTCAACAACAA+TGG - chr8.1:75879864-75879883 MS.gene060490:CDS 35.0%
GGAGCAAATACTTCAACAAA+TGG - chr8.1:75879770-75879789 MS.gene060490:intron 35.0%
TCAATTGAATGGACAAACTG+AGG - chr8.1:75880148-75880167 MS.gene060490:intron 35.0%
TCTTACTAATTGGGTAGCTT+TGG - chr8.1:75880109-75880128 MS.gene060490:intron 35.0%
TGCATTTCTCTACAAAGAAG+AGG + chr8.1:75879201-75879220 None:intergenic 35.0%
TTAGTGCAATATCCCATTGT+GGG + chr8.1:75880203-75880222 None:intergenic 35.0%
TTGGATACTTCTTGTCTTTG+TGG + chr8.1:75879264-75879283 None:intergenic 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG - chr8.1:75880137-75880156 MS.gene060490:intron 35.0%
! GATGATGATGATTTAAGGGT+GGG + chr8.1:75880245-75880264 None:intergenic 35.0%
! GATTTTGGACTCTCTAAGTT+TGG + chr8.1:75879921-75879940 None:intergenic 35.0%
! GCATGATCCAATCAGATTTT+TGG + chr8.1:75879423-75879442 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG + chr8.1:75880246-75880265 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+CGG - chr8.1:75879265-75879284 MS.gene060490:CDS 35.0%
!! TGATGGTGGTCTTACTAATT+GGG - chr8.1:75880100-75880119 MS.gene060490:intron 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG + chr8.1:75879936-75879955 None:intergenic 35.0%
ATCTCAACAAGCTTGAACCA+TGG - chr8.1:75878990-75879009 MS.gene060490:CDS 40.0%
CTCATGGCCAAAAATCTGAT+TGG - chr8.1:75879413-75879432 MS.gene060490:CDS 40.0%
CTTCTTCAGTTGGATGAAAC+CGG + chr8.1:75878898-75878917 None:intergenic 40.0%
GAGTCCAAAATCAACAAGCA+TGG - chr8.1:75879929-75879948 MS.gene060490:CDS 40.0%
GTGTCGAATATGATTGGTGA+TGG - chr8.1:75879618-75879637 MS.gene060490:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG - chr8.1:75879749-75879768 MS.gene060490:intron 40.0%
TAGTGCAATATCCCATTGTG+GGG + chr8.1:75880202-75880221 None:intergenic 40.0%
TCATCAATGGTGATAGCATG+TGG - chr8.1:75880077-75880096 MS.gene060490:intron 40.0%
TCTACTCTCAACAACAATGG+TGG - chr8.1:75879867-75879886 MS.gene060490:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG - chr8.1:75878991-75879010 MS.gene060490:CDS 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG + chr8.1:75878908-75878927 None:intergenic 40.0%
TGCTTTAATGACCCCACAAT+GGG - chr8.1:75880188-75880207 MS.gene060490:intron 40.0%
TTCAGAAGATGACAACAACG+AGG + chr8.1:75880402-75880421 None:intergenic 40.0%
TTGCTTTAATGACCCCACAA+TGG - chr8.1:75880187-75880206 MS.gene060490:intron 40.0%
! GATGATGATGATGCCTCTAA+TGG + chr8.1:75880062-75880081 None:intergenic 40.0%
!! ACTTACCAGATTGGTGTCAT+TGG + chr8.1:75879473-75879492 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG - chr8.1:75880064-75880083 MS.gene060490:intron 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG - chr8.1:75880114-75880133 MS.gene060490:intron 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG - chr8.1:75880099-75880118 MS.gene060490:intron 40.0%
!! TCGAATATGATTGGTGATGG+TGG - chr8.1:75879621-75879640 MS.gene060490:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG + chr8.1:75879415-75879434 None:intergenic 40.0%
AACTGAGGCTTCTAGGCAAT+TGG - chr8.1:75880163-75880182 MS.gene060490:intron 45.0%
ATGGACAAACTGAGGCTTCT+AGG - chr8.1:75880156-75880175 MS.gene060490:intron 45.0%
ATGGTGATAGCATGTGGTGA+TGG - chr8.1:75880083-75880102 MS.gene060490:intron 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG - chr8.1:75879637-75879656 MS.gene060490:CDS 45.0%
CTTGAACCATGGGACATTCA+AGG - chr8.1:75879001-75879020 MS.gene060490:CDS 45.0%
TATAACTTTGTCACGACCGG+TGG + chr8.1:75879332-75879351 None:intergenic 45.0%
TCACTGGCATAGTCATGTGA+GGG + chr8.1:75880347-75880366 None:intergenic 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG - chr8.1:75879638-75879657 MS.gene060490:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG + chr8.1:75879713-75879732 None:intergenic 45.0%
TTGATCGAGCAAAGTTCCAG+AGG + chr8.1:75880376-75880395 None:intergenic 45.0%
!! TACCAGATTGGTGTCATTGG+TGG + chr8.1:75879470-75879489 None:intergenic 45.0%
AAAACCCTAGACAGCCCTTC+TGG - chr8.1:75879696-75879715 MS.gene060490:intron 50.0%
AAGAAGGATGGGTGGTGTGT+AGG - chr8.1:75879649-75879668 MS.gene060490:CDS 50.0%
ACAAATGGGAAGGGGTTGCA+AGG - chr8.1:75879785-75879804 MS.gene060490:intron 50.0%
ATGCCAGTGAGATTGACCTC+TGG - chr8.1:75880357-75880376 MS.gene060490:CDS 50.0%
CACCACCAATGACACCAATC+TGG - chr8.1:75879465-75879484 MS.gene060490:CDS 50.0%
CTCAAGTTCCTCCTGGATTC+CGG - chr8.1:75878876-75878895 MS.gene060490:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG + chr8.1:75880348-75880367 None:intergenic 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG + chr8.1:75879714-75879733 None:intergenic 50.0%
GGACAATCTCAAGTTCCTCC+TGG - chr8.1:75878869-75878888 MS.gene060490:CDS 50.0%
GTATTCGACACGTGACACAG+TGG + chr8.1:75880425-75880444 None:intergenic 50.0%
GTTCCAGAGGTCAATCTCAC+TGG + chr8.1:75880363-75880382 None:intergenic 50.0%
GTTGGATGAAACCGGAATCC+AGG + chr8.1:75878890-75878909 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG - chr8.1:75879397-75879416 MS.gene060490:CDS 50.0%
TGGTCAAGAAGAAGGATGGG+TGG - chr8.1:75879641-75879660 MS.gene060490:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG - chr8.1:75879633-75879652 MS.gene060490:CDS 50.0%
!! GTGATAGCATGTGGTGATGG+TGG - chr8.1:75880086-75880105 MS.gene060490:intron 50.0%
CTCTCCAGAAGGGCTGTCTA+GGG + chr8.1:75879703-75879722 None:intergenic 55.0%
GGATGAAACCGGAATCCAGG+AGG + chr8.1:75878887-75878906 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG - chr8.1:75879702-75879721 MS.gene060490:intron 55.0%
!! AGCGCGATTGGTTCGTGTTC+CGG + chr8.1:75879287-75879306 None:intergenic 55.0%
!! CGATTGGTTCGTGTTCCGGT+TGG + chr8.1:75879283-75879302 None:intergenic 55.0%
CCTCTCCAGAAGGGCTGTCT+AGG + chr8.1:75879704-75879723 None:intergenic 60.0%
GGTGGCTTTCCAGAACCCTG+CGG + chr8.1:75879314-75879333 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG - chr8.1:75879701-75879720 MS.gene060490:intron 60.0%
!! GCAGGGTTCTGGAAAGCCAC+CGG - chr8.1:75879313-75879332 MS.gene060490:CDS 60.0%
ACCAATCGCGCTACAGCCGC+AGG - chr8.1:75879295-75879314 MS.gene060490:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG - chr8.1:75879296-75879315 MS.gene060490:CDS 65.0%
CCCTGCGGCTGTAGCGCGAT+TGG + chr8.1:75879299-75879318 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG - chr8.1:75879302-75879321 MS.gene060490:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 75878839 75880454 75878839 ID=MS.gene060490
chr8.1 mRNA 75878839 75880454 75878839 ID=MS.gene060490.t1;Parent=MS.gene060490
chr8.1 exon 75880271 75880454 75880271 ID=MS.gene060490.t1.exon1;Parent=MS.gene060490.t1
chr8.1 CDS 75880271 75880454 75880271 ID=cds.MS.gene060490.t1;Parent=MS.gene060490.t1
chr8.1 exon 75879807 75880081 75879807 ID=MS.gene060490.t1.exon2;Parent=MS.gene060490.t1
chr8.1 CDS 75879807 75880081 75879807 ID=cds.MS.gene060490.t1;Parent=MS.gene060490.t1
chr8.1 exon 75878839 75879675 75878839 ID=MS.gene060490.t1.exon3;Parent=MS.gene060490.t1
chr8.1 CDS 75878839 75879675 75878839 ID=cds.MS.gene060490.t1;Parent=MS.gene060490.t1
Gene Sequence

>MS.gene060490

ATGCCTGATAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCCGGTTTCATCCAACTGAAGAAGAGCTTCTTCAATACTACTTGAGGAAAAAAGTCTCATATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATTCAAGGTAATATAAATAACTAGCTAACTATATACCTTTATTTATTTCTTCATTCATTTTTTATTTTTGTTAAGTTTATTTATCCTTTCTTTATTCCTTTGATTTATTTCTTCAAGTGGAAGACAAAAAATATATACTGGAATATTGTATCGTGTTTTTTATTTTGTGGTTTTTTTTTTATCCTCTTCTTTGTAGAGAAATGCAAAATAGGAACAACTCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCAACCGGAACACGAACCAATCGCGCTACAGCCGCAGGGTTCTGGAAAGCCACCGGTCGTGACAAAGTTATATATAGCAATGGAAAAAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGTCGTGCTCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGACTCGACGATAACACCACCAATGACACCAATCTGGTAAGTATTAGATACAAATATACGTCTGGATAAACAACTTAATTAAGAACTTCGCTAAATGATACTTATGTATATACTTATATAGTAAATAAATTGGTTAAATTGTTTTCTTTATTGCGACAAAATTTTAGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGACAGCCCTTCTGGAGAGGGAAGAAGAAGCCATCACTTGTATGATACTTGTGATGAAGGAGCTTTGGAGCAAATACTTCAACAAATGGGAAGGGGTTGCAAGGAAGAGAATTATGAAGCAAATTACAATAATAATTATGGAAGGTTTGCAAGGCCTTTTGAATCTACTCTCAACAACAATGGTGGTTATAATAATGAAAGGTTCATGAAACTTCCAAACTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATGATGGGTACCATGCAATTATTCAAGTAGATATGGCTAATGAAAATGAAGGGTCATTCTCTGATCATCATCATAACATGGTTAATAATCCATTAGAGGCATCATCATCATCAATGGTGATAGCATGTGGTGATGGTGGTCTTACTAATTGGGTAGCTTTGGATAGGCTTGTTGCTTCTCAATTGAATGGACAAACTGAGGCTTCTAGGCAATTGGCTTGCTTTAATGACCCCACAATGGGATATTGCACTAATGATCAAGATCTTCAACTTCCCACCCTTAAATCATCATCATCAACTTCATCACTATCAACACAAGTCAGAGCTGCTACTACTACTACTTCTACTACTACTACAGCTACTACTTACATTAGTCCCTCACATGACTATGCCAGTGAGATTGACCTCTGGAACTTTGCTCGATCAACTTCCTCGTTGTTGTCATCTTCTGAACCACTGTGTCACGTGTCGAATACGTCAGTGTGA
Protein sequence

>MS.gene060490.t1

MPDNMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPSGEGRRSHHLYDTCDEGALEQILQQMGRGCKEENYEANYNNNYGRFARPFESTLNNNGGYNNERFMKLPNLESPKSTSMENNENNNDGYHAIIQVDMANENEGSFSDHHHNMVNNPLEASSSSMVIACGDGGLTNWVALDRLVASQLNGQTEASRQLACFNDPTMGYCTNDQDLQLPTLKSSSSTSSLSTQVRAATTTTSTTTTATTYISPSHDYASEIDLWNFARSTSSLLSSSEPLCHVSNTSV