AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82014

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82014.t1 MTR_8g024480 97.235 434 7 1 1 429 1 434 0.0 886
MS.gene82014.t1 MTR_2g062730 75.000 168 30 2 11 177 6 162 5.55e-91 279
MS.gene82014.t1 MTR_4g036030 47.093 344 139 9 9 341 1 312 7.25e-91 279
MS.gene82014.t1 MTR_4g101680 47.605 334 132 8 9 333 1 300 8.42e-90 276
MS.gene82014.t1 MTR_4g035590 73.494 166 32 1 15 180 8 161 1.18e-88 273
MS.gene82014.t1 MTR_5g012080 43.700 373 135 10 9 361 1 318 5.66e-85 264
MS.gene82014.t1 MTR_5g021710 50.980 255 93 3 12 259 5 234 8.49e-85 263
MS.gene82014.t1 MTR_8g076110 50.781 256 109 5 12 267 3 241 9.38e-81 251
MS.gene82014.t1 MTR_1g096430 42.262 336 138 9 9 330 1 294 4.66e-75 238
MS.gene82014.t1 MTR_3g435150 53.714 175 69 4 3 175 2 166 6.13e-58 192
MS.gene82014.t1 MTR_4g108760 48.969 194 76 5 3 193 2 175 1.89e-57 193
MS.gene82014.t1 MTR_6g477900 47.126 174 82 2 15 188 6 169 8.07e-57 187
MS.gene82014.t1 MTR_3g070030 48.000 200 94 3 10 208 14 204 7.04e-56 188
MS.gene82014.t1 MTR_2g078700 52.096 167 68 4 13 177 21 177 7.68e-56 189
MS.gene82014.t1 MTR_5g041940 44.175 206 105 3 14 219 2 197 2.52e-55 184
MS.gene82014.t1 MTR_4g081870 43.810 210 102 5 10 215 4 201 2.78e-55 184
MS.gene82014.t1 MTR_6g084430 52.174 161 63 2 15 175 5 151 2.82e-55 186
MS.gene82014.t1 MTR_2g064090 49.102 167 76 3 15 181 6 163 4.79e-55 186
MS.gene82014.t1 MTR_6g012670 50.588 170 74 3 14 183 19 178 3.29e-54 183
MS.gene82014.t1 MTR_3g109340 49.711 173 72 3 5 175 12 171 5.07e-54 184
MS.gene82014.t1 MTR_7g011130 50.549 182 77 3 10 183 14 190 6.84e-54 183
MS.gene82014.t1 MTR_1g008740 48.108 185 78 5 12 192 10 180 9.32e-54 183
MS.gene82014.t1 MTR_3g109340 49.711 173 71 3 5 175 12 170 1.50e-53 182
MS.gene82014.t1 MTR_1g008740 48.108 185 78 5 12 192 24 194 1.79e-53 182
MS.gene82014.t1 MTR_3g064580 49.693 163 69 3 15 175 6 157 3.28e-53 189
MS.gene82014.t1 MTR_7g085260 49.444 180 77 4 15 190 17 186 5.31e-53 182
MS.gene82014.t1 MTR_2g064470 48.824 170 74 4 12 181 8 164 1.08e-52 179
MS.gene82014.t1 MTR_5g076850 49.693 163 68 3 15 175 6 156 5.02e-52 185
MS.gene82014.t1 MTR_2g080010 40.889 225 114 7 12 228 12 225 5.55e-52 178
MS.gene82014.t1 MTR_7g085220 47.977 173 73 4 12 175 5 169 6.72e-52 177
MS.gene82014.t1 MTR_2g079990 47.879 165 74 2 11 175 12 164 1.54e-51 177
MS.gene82014.t1 MTR_7g011120 52.353 170 74 3 10 177 3 167 2.27e-51 175
MS.gene82014.t1 MTR_6g032770 49.091 165 72 4 15 177 18 172 1.29e-50 175
MS.gene82014.t1 MTR_8g059170 48.780 164 74 3 12 175 11 164 1.54e-50 174
MS.gene82014.t1 MTR_6g011860 38.667 225 122 6 1 219 1 215 3.34e-50 174
MS.gene82014.t1 MTR_3g088110 45.304 181 89 3 14 194 6 176 3.63e-49 169
MS.gene82014.t1 MTR_8g467490 46.988 166 77 4 17 177 16 175 1.04e-48 171
MS.gene82014.t1 MTR_5g014300 45.789 190 77 6 11 191 2 174 1.06e-48 169
MS.gene82014.t1 MTR_2157s0010 44.186 172 90 2 10 178 3 171 1.40e-48 167
MS.gene82014.t1 MTR_2g079990 44.022 184 81 3 11 175 12 192 1.60e-48 170
MS.gene82014.t1 MTR_3g116070 57.143 133 49 4 15 143 23 151 2.02e-48 169
MS.gene82014.t1 MTR_3g096920 39.614 207 109 4 9 212 1 194 2.24e-48 167
MS.gene82014.t1 MTR_7g100990 46.951 164 77 3 14 175 10 165 4.21e-48 167
MS.gene82014.t1 MTR_2g093810 47.059 170 80 3 15 182 14 175 6.21e-48 167
MS.gene82014.t1 MTR_4g089135 42.553 188 89 5 6 177 6 190 2.07e-47 166
MS.gene82014.t1 MTR_2g068880 45.402 174 86 4 9 175 15 186 2.68e-47 165
MS.gene82014.t1 MTR_4g098630 45.055 182 83 4 13 189 4 173 5.01e-47 164
MS.gene82014.t1 MTR_7g005280 47.093 172 72 4 7 176 7 161 6.35e-47 162
MS.gene82014.t1 MTR_1g069805 44.848 165 73 3 13 175 8 156 7.49e-47 162
MS.gene82014.t1 MTR_5g040420 46.429 168 78 4 15 177 14 174 1.38e-46 165
MS.gene82014.t1 MTR_8g094580 43.750 176 82 4 9 180 1 163 2.75e-46 161
MS.gene82014.t1 MTR_3g096920 36.170 235 115 5 9 212 1 231 1.08e-45 161
MS.gene82014.t1 MTR_7g097090 44.785 163 72 3 13 173 8 154 1.30e-45 160
MS.gene82014.t1 MTR_5g069030 45.930 172 83 2 7 178 17 178 1.77e-45 167
MS.gene82014.t1 MTR_1g090720 43.850 187 96 4 17 203 44 221 2.13e-45 164
MS.gene82014.t1 MTR_3g070040 45.026 191 93 3 19 208 12 191 3.83e-45 160
MS.gene82014.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 2.60e-44 157
MS.gene82014.t1 MTR_0036s0150 48.125 160 71 4 17 175 7 155 7.92e-44 160
MS.gene82014.t1 MTR_2g068920 45.238 168 83 4 15 175 20 185 8.02e-44 155
MS.gene82014.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 1.11e-43 158
MS.gene82014.t1 MTR_1g090723 45.625 160 75 3 17 175 10 158 1.16e-43 161
MS.gene82014.t1 MTR_1g090723 46.250 160 75 3 17 175 10 159 1.25e-43 161
MS.gene82014.t1 MTR_8g063550 43.558 163 76 3 17 176 8 157 1.33e-43 158
MS.gene82014.t1 MTR_1g090723 45.625 160 75 3 17 175 10 158 1.35e-43 161
MS.gene82014.t1 MTR_3g096140 43.125 160 81 2 17 176 9 158 2.21e-43 153
MS.gene82014.t1 MTR_5g090970 43.293 164 87 2 15 175 18 178 2.65e-43 154
MS.gene82014.t1 MTR_3g093040 44.199 181 86 5 15 193 108 275 2.77e-43 154
MS.gene82014.t1 MTR_1g097300 49.231 130 65 1 17 146 21 149 5.74e-43 159
MS.gene82014.t1 MTR_4g075980 45.714 175 75 4 17 188 17 174 1.16e-42 152
MS.gene82014.t1 MTR_3g096140 43.125 160 81 2 17 176 9 158 1.60e-42 153
MS.gene82014.t1 MTR_3g093050 44.970 169 83 2 7 175 14 172 2.20e-42 157
MS.gene82014.t1 MTR_5g090970 43.293 164 86 2 15 175 18 177 2.43e-42 151
MS.gene82014.t1 MTR_3g093050 44.970 169 83 2 7 175 14 172 3.47e-42 157
MS.gene82014.t1 MTR_8g093580 42.945 163 77 3 17 176 8 157 1.03e-41 154
MS.gene82014.t1 MTR_4g134460 42.593 162 78 3 15 175 54 201 1.11e-40 150
MS.gene82014.t1 MTR_2g086880 45.333 150 73 2 5 147 1 148 1.82e-39 148
MS.gene82014.t1 MTR_2g086880 45.333 150 73 2 5 147 1 148 3.02e-39 149
MS.gene82014.t1 MTR_3g098810 40.449 178 94 3 3 176 2 171 8.75e-39 140
MS.gene82014.t1 MTR_8g099750 41.899 179 87 5 3 176 2 168 1.04e-38 139
MS.gene82014.t1 MTR_3g098810 40.625 160 84 3 3 157 2 155 6.26e-35 127
MS.gene82014.t1 MTR_3g096140 40.411 146 77 2 31 176 2 137 6.68e-34 129
MS.gene82014.t1 MTR_4g052620 38.172 186 100 6 16 195 6 182 4.00e-33 125
MS.gene82014.t1 MTR_2g086690 39.665 179 84 8 16 183 5 170 9.16e-33 124
MS.gene82014.t1 MTR_8g023840 32.188 320 163 14 15 310 11 300 2.05e-31 124
MS.gene82014.t1 MTR_4g094302 37.423 163 86 4 15 175 11 159 4.64e-29 112
MS.gene82014.t1 MTR_7g105170 35.829 187 108 5 15 195 4 184 1.70e-28 113
MS.gene82014.t1 MTR_8g023860 40.123 162 78 6 14 172 11 156 4.47e-28 115
MS.gene82014.t1 MTR_8g094580 46.491 114 47 3 71 180 6 109 1.31e-27 110
MS.gene82014.t1 MTR_4g094302 40.458 131 65 3 15 143 11 130 1.23e-26 105
MS.gene82014.t1 MTR_8g023900 38.587 184 91 8 18 195 196 363 1.13e-25 108
MS.gene82014.t1 MTR_8g023900 37.870 169 78 7 15 175 12 161 2.46e-25 108
MS.gene82014.t1 MTR_8g023930 31.126 302 150 14 15 288 24 295 1.03e-24 106
MS.gene82014.t1 MTR_7g070140 53.247 77 34 1 75 149 21 97 2.22e-22 92.8
MS.gene82014.t1 MTR_8g023880 34.254 181 80 8 13 175 5 164 1.81e-20 90.9
MS.gene82014.t1 MTR_3g096400 32.934 167 94 7 14 174 6 160 2.48e-18 83.6
MS.gene82014.t1 MTR_8g093790 30.723 166 83 7 14 179 9 142 8.35e-18 81.3
MS.gene82014.t1 MTR_7g070150 50.820 61 18 1 115 175 9 57 2.20e-15 71.6
MS.gene82014.t1 MTR_1g045470 32.121 165 89 8 23 179 13 162 9.83e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82014.t1 AT2G46770 52.500 440 120 11 1 428 2 364 4.13e-137 397
MS.gene82014.t1 AT3G61910 47.031 421 128 10 5 418 1 333 7.17e-113 335
MS.gene82014.t1 AT1G32770 50.000 346 115 8 1 333 1 301 1.15e-103 312
MS.gene82014.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.45e-90 278
MS.gene82014.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.45e-90 278
MS.gene82014.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.45e-90 278
MS.gene82014.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.45e-90 278
MS.gene82014.t1 AT1G79580 73.295 176 34 3 6 180 8 171 3.45e-90 278
MS.gene82014.t1 AT4G10350 68.132 182 47 2 5 186 1 171 7.86e-88 271
MS.gene82014.t1 AT2G18060 44.675 338 133 9 15 337 9 307 1.08e-87 271
MS.gene82014.t1 AT2G18060 44.675 338 133 9 15 337 9 307 1.08e-87 271
MS.gene82014.t1 AT4G36160 45.455 341 145 8 8 338 7 316 5.30e-87 270
MS.gene82014.t1 AT4G36160 45.455 341 145 8 8 338 3 312 6.49e-87 270
MS.gene82014.t1 AT4G36160 45.455 341 145 8 8 338 3 312 6.49e-87 270
MS.gene82014.t1 AT1G33280 69.461 167 39 1 15 181 8 162 7.57e-86 265
MS.gene82014.t1 AT1G12260 40.319 439 175 13 9 405 1 394 1.56e-85 267
MS.gene82014.t1 AT1G62700 41.602 387 170 7 9 362 1 364 2.85e-82 258
MS.gene82014.t1 AT1G62700 41.602 387 170 7 9 362 1 364 2.85e-82 258
MS.gene82014.t1 AT1G12260 41.337 404 167 13 9 405 1 341 3.15e-82 256
MS.gene82014.t1 AT5G66300 40.678 354 115 10 5 332 2 286 2.80e-81 252
MS.gene82014.t1 AT5G62380 41.691 343 122 9 13 332 5 292 3.62e-76 241
MS.gene82014.t1 AT5G62380 41.691 343 122 9 13 332 5 292 3.62e-76 241
MS.gene82014.t1 AT1G71930 65.854 164 45 1 12 175 6 158 7.77e-76 239
MS.gene82014.t1 AT1G71930 65.854 164 45 1 12 175 6 158 7.77e-76 239
MS.gene82014.t1 AT3G18400 54.118 170 63 3 12 180 2 157 1.73e-59 197
MS.gene82014.t1 AT3G17730 50.000 172 72 3 15 184 6 165 7.64e-58 190
MS.gene82014.t1 AT1G69490 48.066 181 86 2 7 187 1 173 1.24e-56 188
MS.gene82014.t1 AT5G07680 53.659 164 66 3 12 175 14 167 2.97e-56 189
MS.gene82014.t1 AT5G07680 54.037 161 64 3 15 175 3 153 4.35e-56 188
MS.gene82014.t1 AT2G24430 51.205 166 66 3 12 175 13 165 6.69e-56 187
MS.gene82014.t1 AT2G24430 51.205 166 66 3 12 175 13 165 6.69e-56 187
MS.gene82014.t1 AT3G04070 48.913 184 82 5 7 185 2 178 1.09e-55 188
MS.gene82014.t1 AT4G10350 66.142 127 34 1 60 186 7 124 2.00e-55 186
MS.gene82014.t1 AT5G61430 52.439 164 68 3 12 175 13 166 5.46e-55 186
MS.gene82014.t1 AT5G39610 52.469 162 67 3 15 176 20 171 5.86e-55 184
MS.gene82014.t1 AT3G04070 47.475 198 80 6 7 185 2 194 2.15e-54 185
MS.gene82014.t1 AT3G15170 53.374 163 64 4 12 172 17 169 8.02e-54 182
MS.gene82014.t1 AT1G76420 50.307 163 66 3 15 175 22 171 1.03e-53 182
MS.gene82014.t1 AT5G17260 45.055 182 88 3 15 196 6 175 1.07e-53 186
MS.gene82014.t1 AT3G03200 38.843 242 115 5 15 235 6 235 1.20e-53 186
MS.gene82014.t1 AT3G12977 47.674 172 79 2 12 183 15 175 2.76e-53 179
MS.gene82014.t1 AT1G65910 48.466 163 70 3 15 175 6 156 1.58e-52 186
MS.gene82014.t1 AT4G27410 49.390 164 71 3 12 175 11 162 2.31e-52 177
MS.gene82014.t1 AT3G29035 60.000 130 49 1 15 144 24 150 3.63e-52 178
MS.gene82014.t1 AT5G53950 51.786 168 68 5 11 175 12 169 5.83e-52 179
MS.gene82014.t1 AT1G54330 52.761 163 60 4 15 175 6 153 1.26e-51 176
MS.gene82014.t1 AT5G18270 50.000 164 71 4 15 177 21 174 1.45e-51 177
MS.gene82014.t1 AT1G56010 49.091 165 74 3 12 175 16 171 1.83e-51 176
MS.gene82014.t1 AT5G18270 49.390 164 72 4 15 177 21 174 2.51e-51 176
MS.gene82014.t1 AT5G46590 51.149 174 70 5 11 181 2 163 4.67e-51 174
MS.gene82014.t1 AT3G04060 50.617 162 69 4 15 175 20 171 2.61e-50 173
MS.gene82014.t1 AT1G61110 45.562 169 85 3 11 175 12 177 5.66e-50 172
MS.gene82014.t1 AT5G46590 55.263 152 61 4 11 158 2 150 1.24e-49 170
MS.gene82014.t1 AT4G27410 45.506 178 74 3 12 175 11 179 1.00e-48 169
MS.gene82014.t1 AT3G15500 46.667 165 76 3 12 176 11 163 1.07e-48 169
MS.gene82014.t1 AT5G63790 44.199 181 91 4 9 188 54 225 2.94e-48 167
MS.gene82014.t1 AT5G63790 44.199 181 91 4 9 188 44 215 3.15e-48 167
MS.gene82014.t1 AT1G52890 45.783 166 78 3 12 177 11 164 6.26e-48 167
MS.gene82014.t1 AT2G43000 47.170 159 73 2 17 175 20 167 2.02e-47 164
MS.gene82014.t1 AT3G10490 44.615 195 90 6 13 204 25 204 2.26e-47 162
MS.gene82014.t1 AT1G77450 41.538 195 102 4 14 208 9 191 2.57e-47 163
MS.gene82014.t1 AT5G13180 45.455 176 78 4 3 176 2 161 2.93e-47 163
MS.gene82014.t1 AT5G04410 46.626 163 77 2 13 175 7 159 3.05e-47 171
MS.gene82014.t1 AT3G10480 48.538 171 74 4 17 187 29 185 5.57e-47 167
MS.gene82014.t1 AT5G08790 46.707 167 79 4 15 180 7 164 5.64e-47 163
MS.gene82014.t1 AT3G10500 46.012 163 78 2 13 175 7 159 5.71e-47 169
MS.gene82014.t1 AT1G26870 46.012 163 83 2 17 177 18 177 6.63e-47 167
MS.gene82014.t1 AT2G33480 44.318 176 83 2 1 176 1 161 8.17e-47 162
MS.gene82014.t1 AT5G39820 41.799 189 77 4 15 181 20 197 9.46e-47 164
MS.gene82014.t1 AT3G10480 48.538 171 75 5 17 187 29 186 1.08e-46 167
MS.gene82014.t1 AT3G15510 45.562 169 85 4 19 183 21 186 1.43e-46 164
MS.gene82014.t1 AT3G10490 45.550 191 86 6 17 204 29 204 3.59e-46 165
MS.gene82014.t1 AT1G01720 46.012 163 79 3 14 176 6 159 3.75e-46 161
MS.gene82014.t1 AT4G17980 46.512 172 72 5 11 175 2 160 7.90e-46 159
MS.gene82014.t1 AT1G33060 43.005 193 81 4 15 207 24 187 1.23e-45 167
MS.gene82014.t1 AT2G33480 44.318 176 81 3 1 176 1 159 1.37e-45 159
MS.gene82014.t1 AT1G33060 43.005 193 81 4 15 207 24 187 1.41e-45 167
MS.gene82014.t1 AT4G17980 46.512 172 72 5 11 175 2 160 1.73e-45 159
MS.gene82014.t1 AT1G32510 45.143 175 76 5 13 178 4 167 3.70e-45 158
MS.gene82014.t1 AT5G24590 43.889 180 90 3 7 185 5 174 4.96e-45 162
MS.gene82014.t1 AT4G35580 46.012 163 78 2 15 177 9 161 4.80e-44 161
MS.gene82014.t1 AT4G35580 46.012 163 78 2 15 177 9 161 5.85e-44 161
MS.gene82014.t1 AT4G35580 46.012 163 78 2 15 177 9 161 6.77e-44 161
MS.gene82014.t1 AT3G49530 44.000 175 85 5 4 176 2 165 6.20e-43 155
MS.gene82014.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.12e-43 157
MS.gene82014.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.12e-43 157
MS.gene82014.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.12e-43 157
MS.gene82014.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.12e-43 157
MS.gene82014.t1 AT5G09330 41.818 165 86 2 11 175 2 156 8.12e-43 157
MS.gene82014.t1 AT3G49530 44.000 175 85 5 4 176 2 165 1.23e-42 156
MS.gene82014.t1 AT1G52880 47.239 163 78 3 19 177 21 179 2.69e-42 152
MS.gene82014.t1 AT2G02450 40.206 194 100 4 15 206 51 230 3.51e-42 153
MS.gene82014.t1 AT5G64060 41.212 165 87 2 11 175 2 156 3.73e-42 152
MS.gene82014.t1 AT3G10480 40.930 215 80 7 6 187 19 219 4.04e-42 156
MS.gene82014.t1 AT2G02450 40.206 194 100 4 15 206 51 230 5.70e-42 153
MS.gene82014.t1 AT1G34180 47.287 129 67 1 17 145 18 145 5.61e-41 151
MS.gene82014.t1 AT1G34190 46.154 130 69 1 17 146 18 146 9.81e-41 152
MS.gene82014.t1 AT4G28530 41.209 182 71 5 13 175 8 172 1.07e-40 148
MS.gene82014.t1 AT1G34180 47.287 129 67 1 17 145 18 145 1.40e-40 152
MS.gene82014.t1 AT2G27300 40.000 170 81 3 5 174 7 155 4.34e-40 146
MS.gene82014.t1 AT2G17040 41.765 170 79 4 17 183 8 160 6.02e-40 144
MS.gene82014.t1 AT1G34180 44.286 140 67 1 17 145 18 157 8.99e-40 148
MS.gene82014.t1 AT1G34180 44.286 140 67 1 17 145 18 157 2.38e-39 149
MS.gene82014.t1 AT5G22290 38.554 166 85 2 13 178 19 167 1.52e-37 139
MS.gene82014.t1 AT3G12910 43.750 176 69 7 17 175 23 185 8.41e-37 137
MS.gene82014.t1 AT5G04395 46.622 148 66 3 12 146 25 172 1.40e-36 132
MS.gene82014.t1 AT1G56010 55.340 103 40 1 73 175 8 104 1.48e-35 132
MS.gene82014.t1 AT3G12977 47.581 124 54 2 60 183 10 122 4.25e-35 130
MS.gene82014.t1 AT5G61430 54.286 105 41 2 71 175 6 103 7.70e-35 130
MS.gene82014.t1 AT3G44290 42.400 125 70 1 17 141 16 138 1.23e-34 129
MS.gene82014.t1 AT3G44290 42.400 125 70 1 17 141 16 138 6.39e-34 130
MS.gene82014.t1 AT1G32870 39.884 173 89 5 5 175 1 160 1.98e-33 132
MS.gene82014.t1 AT1G32870 39.884 173 89 5 5 175 1 160 2.25e-33 132
MS.gene82014.t1 AT2G18060 34.630 257 114 9 96 337 2 219 2.72e-33 126
MS.gene82014.t1 AT1G32870 39.884 173 89 5 5 175 37 196 3.71e-33 131
MS.gene82014.t1 AT2G33480 46.226 106 48 1 71 176 8 104 7.33e-28 110
MS.gene82014.t1 AT5G22380 38.776 147 80 5 14 153 4 147 1.30e-24 102
MS.gene82014.t1 AT3G44350 34.302 172 96 7 18 183 8 168 3.83e-24 100
MS.gene82014.t1 AT5G64530 34.524 168 88 6 15 175 3 155 4.03e-24 99.4
MS.gene82014.t1 AT5G64530 40.602 133 62 5 15 145 3 120 1.80e-23 96.7
MS.gene82014.t1 AT3G44350 38.571 140 77 5 18 151 8 144 2.44e-23 96.3
MS.gene82014.t1 AT4G28530 39.552 134 58 4 13 127 8 137 5.09e-23 99.4
MS.gene82014.t1 AT3G04420 40.152 132 68 3 16 141 4 130 5.51e-23 98.6
MS.gene82014.t1 AT1G02230 42.222 135 61 6 16 141 4 130 8.78e-23 99.4
MS.gene82014.t1 AT3G04420 40.152 132 68 3 16 141 4 130 1.41e-22 98.6
MS.gene82014.t1 AT2G43000 45.833 96 44 1 80 175 2 89 2.68e-22 94.4
MS.gene82014.t1 AT4G01520 35.606 132 81 2 16 143 5 136 1.97e-21 94.4
MS.gene82014.t1 AT4G01540 36.641 131 77 3 18 143 7 136 2.77e-21 95.9
MS.gene82014.t1 AT4G01540 36.641 131 77 3 18 143 7 136 4.49e-21 94.7
MS.gene82014.t1 AT4G01540 36.641 131 77 3 18 143 7 136 5.06e-21 95.5
MS.gene82014.t1 AT1G02250 41.667 132 66 6 16 141 4 130 5.76e-21 94.4
MS.gene82014.t1 AT4G01540 36.641 131 77 3 18 143 7 136 6.19e-21 94.7
MS.gene82014.t1 AT4G01550 37.692 130 76 3 18 143 7 135 2.28e-20 93.6
MS.gene82014.t1 AT3G10490 42.735 117 50 5 91 204 2 104 1.95e-19 89.7
MS.gene82014.t1 AT3G10490 42.735 117 50 5 91 204 2 104 1.95e-19 89.7
MS.gene82014.t1 AT1G02220 36.025 161 84 6 14 165 2 152 2.37e-19 89.7
MS.gene82014.t1 AT5G50820 33.099 142 79 5 7 143 8 138 4.19e-17 79.7
MS.gene82014.t1 AT5G14000 33.094 139 86 2 7 143 7 140 6.05e-17 78.2
MS.gene82014.t1 AT1G01010 36.496 137 74 6 18 144 6 139 2.03e-16 81.3
MS.gene82014.t1 AT5G14000 33.094 139 86 2 7 143 7 140 2.55e-16 77.8
MS.gene82014.t1 AT5G22290 37.805 82 36 1 97 178 2 68 2.88e-13 69.7
MS.gene82014.t1 AT3G56530 27.848 158 110 2 3 158 40 195 4.35e-13 70.5
MS.gene82014.t1 AT3G04430 35.075 134 70 6 21 141 6 135 1.71e-11 63.5

Find 103 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCATGCTTGTTGATTT+TGG 0.074213 8.2:+71395531 None:intergenic
GCAAATTACAATAATAATTA+TGG 0.234766 8.2:-71395642 MS.gene82014:CDS
AAGTTGATGATGATGATTTA+AGG 0.268850 8.2:+71395217 None:intergenic
CTCAAGTTCCTCCTGGATTC+CGG 0.279380 8.2:-71396589 MS.gene82014:CDS
GTATCTAATACTTACCAAAT+TGG 0.280632 8.2:+71395985 None:intergenic
GCGCTACAGCCGCAGGGTTC+TGG 0.282580 8.2:-71396162 MS.gene82014:CDS
AACATGAGCATATCTGTTAA+TGG 0.305797 8.2:-71396617 MS.gene82014:CDS
CACCACCAATGACACCAATT+TGG 0.318447 8.2:-71395999 MS.gene82014:intron
ATGGACAAACTGAGGCTTCT+AGG 0.319602 8.2:-71395308 MS.gene82014:CDS
TTTGTAGAGAAATGCAAAAT+AGG 0.328623 8.2:-71396259 MS.gene82014:intron
AGCGCGATTGGTTCGTGTTC+CGG 0.335099 8.2:+71396180 None:intergenic
TTATATATAGCAATGGAAAA+AGG 0.350881 8.2:-71396117 MS.gene82014:CDS
GTGATGGTGGTCTTACTAAT+TGG 0.352073 8.2:-71395365 MS.gene82014:CDS
ACAGATATGCTCATGTTATC+AGG 0.354451 8.2:+71396623 None:intergenic
CCTCTCCAGAAGGGCTGTCT+AGG 0.360170 8.2:+71395763 None:intergenic
TCTTACTAATTGGGTAGCTT+TGG 0.361121 8.2:-71395355 MS.gene82014:CDS
TGCAATTATTCAAGTAGATA+TGG 0.369279 8.2:-71395481 MS.gene82014:CDS
GGAGCAAATACTTCAACAAA+TGG 0.371761 8.2:-71395694 MS.gene82014:CDS
ACTTACCAAATTGGTGTCAT+TGG 0.377318 8.2:+71395994 None:intergenic
CTTGTTGCTTCTCAATTGAA+TGG 0.385288 8.2:-71395327 MS.gene82014:CDS
TTGGATACTTCTTGTCTTTG+TGG 0.389435 8.2:+71396203 None:intergenic
AAAACCCTAGACAGCCCTTC+TGG 0.397489 8.2:-71395768 MS.gene82014:CDS
AACTGAGGCTTCTAGGCAAT+TGG 0.397982 8.2:-71395301 MS.gene82014:CDS
GATGATGATGATGCCTCTAA+TGG 0.411646 8.2:+71395405 None:intergenic
CTTCTTCAGTTGGATGAAAC+CGG 0.420245 8.2:+71396570 None:intergenic
TACTTGTGATGAAGGAGCTT+TGG 0.423237 8.2:-71395715 MS.gene82014:CDS
TGCTTTAATGACCCCACAAT+GGG 0.424079 8.2:-71395276 MS.gene82014:CDS
CATGGTTAATAATCCATTAG+AGG 0.428212 8.2:-71395418 MS.gene82014:CDS
CCCTGCGGCTGTAGCGCGAT+TGG 0.449718 8.2:+71396168 None:intergenic
CTTCTTCTTCCCTCTCCAGA+AGG 0.463749 8.2:+71395753 None:intergenic
TGAAGAAGCTCTTCTTCAGT+TGG 0.465783 8.2:+71396560 None:intergenic
TGATGGTGGTCTTACTAATT+GGG 0.469019 8.2:-71395364 MS.gene82014:CDS
GAACAACTCCACAAAATGAT+TGG 0.470282 8.2:-71396237 MS.gene82014:CDS
ACCAATCGCGCTACAGCCGC+AGG 0.471757 8.2:-71396169 MS.gene82014:CDS
AACAATGAGAACAACAATGA+TGG 0.475096 8.2:-71395510 MS.gene82014:CDS
AGTTGATGATGATGATTTAA+GGG 0.477571 8.2:+71395218 None:intergenic
TTCTTCTTCCCTCTCCAGAA+GGG 0.478150 8.2:+71395754 None:intergenic
CTAATTGGGTAGCTTTGGAT+AGG 0.478615 8.2:-71395350 MS.gene82014:CDS
ATGGTGGTCAAGAAGAAGGA+TGG 0.479948 8.2:-71395827 MS.gene82014:CDS
GGACAATCTCAAGTTCCTCC+TGG 0.485001 8.2:-71396596 MS.gene82014:CDS
CTCTCCAGAAGGGCTGTCTA+GGG 0.487859 8.2:+71395764 None:intergenic
GTTGGATGAAACCGGAATCC+AGG 0.489389 8.2:+71396578 None:intergenic
CTTGAACCATGGGACATTCA+AGG 0.497760 8.2:-71396464 MS.gene82014:intron
AAGAAGGATGGGTGGTGTGT+AGG 0.502710 8.2:-71395815 MS.gene82014:CDS
GAGCAAATACTTCAACAAAT+GGG 0.518882 8.2:-71395693 MS.gene82014:CDS
TACAAAGGTCGTGCTCCTCA+TGG 0.519789 8.2:-71396067 MS.gene82014:CDS
TTAGTGCAATATCCCATTGT+GGG 0.521916 8.2:+71395264 None:intergenic
CGATTGGTTCGTGTTCCGGT+TGG 0.532825 8.2:+71396184 None:intergenic
GTTCCAGAGGTCAATCTCAC+TGG 0.538763 8.2:+71395110 None:intergenic
GGTGATGGTGGTCAAGAAGA+AGG 0.538922 8.2:-71395831 MS.gene82014:CDS
CACAAGTATCATACAAGTGA+TGG 0.540165 8.2:+71395730 None:intergenic
AGAGGCATCATCATCATCAA+TGG 0.541656 8.2:-71395400 MS.gene82014:CDS
CTAGACAGCCCTTCTGGAGA+GGG 0.547964 8.2:-71395762 MS.gene82014:CDS
AGCTTCTTCAATACTACTTG+AGG 0.548206 8.2:-71396547 MS.gene82014:CDS
AAAGACAAGAAGTATCCAAC+CGG 0.551006 8.2:-71396199 MS.gene82014:CDS
GATATGGCTAATGAAAATGA+AGG 0.553711 8.2:-71395465 MS.gene82014:CDS
ATTACAATAATAATTATGGA+AGG 0.553899 8.2:-71395638 MS.gene82014:CDS
ATAATTATGGAAGGTTTGCA+AGG 0.557854 8.2:-71395629 MS.gene82014:CDS
GCAGGGTTCTGGAAAGCCAC+AGG 0.562165 8.2:-71396151 MS.gene82014:CDS
CTCTGATCATCATCATAACA+TGG 0.564367 8.2:-71395436 MS.gene82014:CDS
GACAAAGTTATATATAGCAA+TGG 0.565094 8.2:-71396124 MS.gene82014:CDS
TTGTTGAGAGTAGATTCAAA+AGG 0.565100 8.2:+71395606 None:intergenic
ATCTCAACAAGCTTGAACCA+TGG 0.570034 8.2:-71396475 MS.gene82014:CDS
GAGTCCAAAATCAACAAGCA+TGG 0.570658 8.2:-71395535 MS.gene82014:CDS
TACCAAATTGGTGTCATTGG+TGG 0.571229 8.2:+71395997 None:intergenic
TATAACTTTGTCACGACCTG+TGG 0.574039 8.2:+71396135 None:intergenic
TTGTATGATACTTGTGATGA+AGG 0.576333 8.2:-71395723 MS.gene82014:CDS
TATCTACTTGAATAATTGCA+TGG 0.578399 8.2:+71395484 None:intergenic
GATGATGATGATTTAAGGGT+GGG 0.578828 8.2:+71395222 None:intergenic
TGGTGGTCAAGAAGAAGGAT+GGG 0.580328 8.2:-71395826 MS.gene82014:CDS
ATATTACCTTGAATGTCCCA+TGG 0.582876 8.2:+71396458 None:intergenic
ACAATGAGAACAACAATGAT+GGG 0.583551 8.2:-71395509 MS.gene82014:CDS
TCTCAACAAGCTTGAACCAT+GGG 0.584241 8.2:-71396474 MS.gene82014:CDS
ACAAATGGGAAGGGGTTGCA+AGG 0.584361 8.2:-71395679 MS.gene82014:CDS
ATGGTGGTTATAATAATGAA+AGG 0.589878 8.2:-71395581 MS.gene82014:CDS
AAATACTTCAACAAATGGGA+AGG 0.591385 8.2:-71395689 MS.gene82014:CDS
TCAATTGAATGGACAAACTG+AGG 0.592361 8.2:-71395316 MS.gene82014:CDS
AATACTTCAACAAATGGGAA+GGG 0.596086 8.2:-71395688 MS.gene82014:CDS
ATGCCAGTGAGATTGACCTC+TGG 0.596304 8.2:-71395113 MS.gene82014:CDS
CCTAGACAGCCCTTCTGGAG+AGG 0.596746 8.2:-71395763 MS.gene82014:CDS
ATTAGTGCAATATCCCATTG+TGG 0.600538 8.2:+71395263 None:intergenic
GAATCTACTCTCAACAACAA+TGG 0.604976 8.2:-71395600 MS.gene82014:CDS
TTGCTTTAATGACCCCACAA+TGG 0.606154 8.2:-71395277 MS.gene82014:CDS
CAACATCACGAATAACATCA+AGG 0.607029 8.2:+71396498 None:intergenic
ATACTTCAACAAATGGGAAG+GGG 0.611109 8.2:-71395687 MS.gene82014:CDS
TGATGATGATGATTTAAGGG+TGG 0.618237 8.2:+71395221 None:intergenic
GTGTCGAATATGATTGGTGA+TGG 0.624396 8.2:-71395846 MS.gene82014:CDS
CTCACTGGCATAGTCATGTG+AGG 0.627225 8.2:+71395125 None:intergenic
ATGGTGATAGCATGTGGTGA+TGG 0.628336 8.2:-71395381 MS.gene82014:CDS
TCGAATATGATTGGTGATGG+TGG 0.634462 8.2:-71395843 MS.gene82014:CDS
GTGATAGCATGTGGTGATGG+TGG 0.637758 8.2:-71395378 MS.gene82014:CDS
TCACTGGCATAGTCATGTGA+GGG 0.651790 8.2:+71395126 None:intergenic
CCAATCGCGCTACAGCCGCA+GGG 0.651911 8.2:-71396168 MS.gene82014:CDS
TCTACTCTCAACAACAATGG+TGG 0.656048 8.2:-71395597 MS.gene82014:CDS
TGGTCAAGAAGAAGGATGGG+TGG 0.660445 8.2:-71395823 MS.gene82014:CDS
ATATGGCTAATGAAAATGAA+GGG 0.670014 8.2:-71395464 MS.gene82014:CDS
TCGATCGAGCAAAGTTCCAG+AGG 0.677993 8.2:+71395097 None:intergenic
TAGTGCAATATCCCATTGTG+GGG 0.681689 8.2:+71395265 None:intergenic
GGATGAAACCGGAATCCAGG+AGG 0.718093 8.2:+71396581 None:intergenic
TCATCAATGGTGATAGCATG+TGG 0.720641 8.2:-71395387 MS.gene82014:CDS
GTATTCGACACGTGACACAG+TGG 0.748440 8.2:+71395048 None:intergenic
TGTGGCTTTCCAGAACCCTG+CGG 0.759505 8.2:+71396153 None:intergenic
TTCAGAAGATGACAACAACG+AGG 0.812789 8.2:+71395071 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTATATAGTAAATAAAT+TGG - chr8.2:71395761-71395780 MS.gene82014:CDS 10.0%
!! ATGAATGAAGAAATAAATAA+AGG + chr8.2:71395255-71395274 None:intergenic 15.0%
!! ATTACAATAATAATTATGGA+AGG - chr8.2:71396026-71396045 MS.gene82014:CDS 15.0%
!! GCAAATTACAATAATAATTA+TGG - chr8.2:71396022-71396041 MS.gene82014:CDS 15.0%
!! AAATCAAAGGAATAAAGAAA+AGG + chr8.2:71395303-71395322 None:intergenic 20.0%
!! TTATATATAGCAATGGAAAA+AGG - chr8.2:71395547-71395566 MS.gene82014:CDS 20.0%
! ATATGGCTAATGAAAATGAA+GGG - chr8.2:71396200-71396219 MS.gene82014:CDS 25.0%
! ATGGTGGTTATAATAATGAA+AGG - chr8.2:71396083-71396102 MS.gene82014:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG - chr8.2:71395693-71395712 MS.gene82014:CDS 25.0%
! CACTTGAAGAAATAAATCAA+AGG + chr8.2:71395316-71395335 None:intergenic 25.0%
! GACAAAGTTATATATAGCAA+TGG - chr8.2:71395540-71395559 MS.gene82014:CDS 25.0%
! GGAAGACAATAAATATATAC+TGG - chr8.2:71395335-71395354 MS.gene82014:CDS 25.0%
! GTATCTAATACTTACCAAAT+TGG + chr8.2:71395682-71395701 None:intergenic 25.0%
! TATCTACTTGAATAATTGCA+TGG + chr8.2:71396183-71396202 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+TGG - chr8.2:71396183-71396202 MS.gene82014:CDS 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG - chr8.2:71395405-71395424 MS.gene82014:CDS 25.0%
!! CTTTATTGCGACAAAATTTT+AGG - chr8.2:71395796-71395815 MS.gene82014:CDS 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG - chr8.2:71395314-71395333 MS.gene82014:CDS 25.0%
!!! AAGTTGATGATGATGATTTA+AGG + chr8.2:71396450-71396469 None:intergenic 25.0%
!!! AGTTGATGATGATGATTTAA+GGG + chr8.2:71396449-71396468 None:intergenic 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG - chr8.2:71395364-71395383 MS.gene82014:CDS 25.0%
AAATACTTCAACAAATGGGA+AGG - chr8.2:71395975-71395994 MS.gene82014:intron 30.0%
AACAATGAGAACAACAATGA+TGG - chr8.2:71396154-71396173 MS.gene82014:CDS 30.0%
AACATGAGCATATCTGTTAA+TGG - chr8.2:71395047-71395066 MS.gene82014:CDS 30.0%
AATACTTCAACAAATGGGAA+GGG - chr8.2:71395976-71395995 MS.gene82014:intron 30.0%
ACAATGAGAACAACAATGAT+GGG - chr8.2:71396155-71396174 MS.gene82014:CDS 30.0%
ATAATTATGGAAGGTTTGCA+AGG - chr8.2:71396035-71396054 MS.gene82014:CDS 30.0%
CATGGTTAATAATCCATTAG+AGG - chr8.2:71396246-71396265 MS.gene82014:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG - chr8.2:71395971-71395990 MS.gene82014:intron 30.0%
GATATGGCTAATGAAAATGA+AGG - chr8.2:71396199-71396218 MS.gene82014:CDS 30.0%
TATAGCAATGGAAAAAGGAT+TGG - chr8.2:71395552-71395571 MS.gene82014:CDS 30.0%
TTGTATGATACTTGTGATGA+AGG - chr8.2:71395941-71395960 MS.gene82014:intron 30.0%
TTGTTGAGAGTAGATTCAAA+AGG + chr8.2:71396061-71396080 None:intergenic 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG + chr8.2:71395438-71395457 None:intergenic 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG - chr8.2:71395582-71395601 MS.gene82014:CDS 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG - chr8.2:71395812-71395831 MS.gene82014:CDS 30.0%
ACAGATATGCTCATGTTATC+AGG + chr8.2:71395044-71395063 None:intergenic 35.0%
AGCTTCTTCAATACTACTTG+AGG - chr8.2:71395117-71395136 MS.gene82014:CDS 35.0%
ATACTTCAACAAATGGGAAG+GGG - chr8.2:71395977-71395996 MS.gene82014:intron 35.0%
ATATTACCTTGAATGTCCCA+TGG + chr8.2:71395209-71395228 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG + chr8.2:71396404-71396423 None:intergenic 35.0%
CAACATCACGAATAACATCA+AGG + chr8.2:71395169-71395188 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG + chr8.2:71395937-71395956 None:intergenic 35.0%
CTCTGATCATCATCATAACA+TGG - chr8.2:71396228-71396247 MS.gene82014:CDS 35.0%
GAACAACTCCACAAAATGAT+TGG - chr8.2:71395427-71395446 MS.gene82014:CDS 35.0%
GAATCTACTCTCAACAACAA+TGG - chr8.2:71396064-71396083 MS.gene82014:CDS 35.0%
GGAGCAAATACTTCAACAAA+TGG - chr8.2:71395970-71395989 MS.gene82014:intron 35.0%
TCAATTGAATGGACAAACTG+AGG - chr8.2:71396348-71396367 MS.gene82014:intron 35.0%
TCTTACTAATTGGGTAGCTT+TGG - chr8.2:71396309-71396328 MS.gene82014:intron 35.0%
TGCATTTCTCTACAAAGAAG+AGG + chr8.2:71395401-71395420 None:intergenic 35.0%
TTAGTGCAATATCCCATTGT+GGG + chr8.2:71396403-71396422 None:intergenic 35.0%
TTGGATACTTCTTGTCTTTG+TGG + chr8.2:71395464-71395483 None:intergenic 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG - chr8.2:71396337-71396356 MS.gene82014:intron 35.0%
! GATGATGATGATTTAAGGGT+GGG + chr8.2:71396445-71396464 None:intergenic 35.0%
! GATTTTGGACTCTCTAAGTT+TGG + chr8.2:71396121-71396140 None:intergenic 35.0%
! GCATGATCCAATCAGATTTT+TGG + chr8.2:71395623-71395642 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG + chr8.2:71396446-71396465 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+CGG - chr8.2:71395465-71395484 MS.gene82014:CDS 35.0%
!! ACTTACCAAATTGGTGTCAT+TGG + chr8.2:71395673-71395692 None:intergenic 35.0%
!! TGATGGTGGTCTTACTAATT+GGG - chr8.2:71396300-71396319 MS.gene82014:intron 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG + chr8.2:71396136-71396155 None:intergenic 35.0%
ATCTCAACAAGCTTGAACCA+TGG - chr8.2:71395189-71395208 MS.gene82014:CDS 40.0%
CTCATGGCCAAAAATCTGAT+TGG - chr8.2:71395613-71395632 MS.gene82014:CDS 40.0%
CTTCTTCAGTTGGATGAAAC+CGG + chr8.2:71395097-71395116 None:intergenic 40.0%
GAGTCCAAAATCAACAAGCA+TGG - chr8.2:71396129-71396148 MS.gene82014:CDS 40.0%
GTGTCGAATATGATTGGTGA+TGG - chr8.2:71395818-71395837 MS.gene82014:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG - chr8.2:71395949-71395968 MS.gene82014:intron 40.0%
TAGTGCAATATCCCATTGTG+GGG + chr8.2:71396402-71396421 None:intergenic 40.0%
TATAACTTTGTCACGACCTG+TGG + chr8.2:71395532-71395551 None:intergenic 40.0%
TCATCAATGGTGATAGCATG+TGG - chr8.2:71396277-71396296 MS.gene82014:intron 40.0%
TCTACTCTCAACAACAATGG+TGG - chr8.2:71396067-71396086 MS.gene82014:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG - chr8.2:71395190-71395209 MS.gene82014:CDS 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG + chr8.2:71395107-71395126 None:intergenic 40.0%
TGCTTTAATGACCCCACAAT+GGG - chr8.2:71396388-71396407 MS.gene82014:intron 40.0%
TTCAGAAGATGACAACAACG+AGG + chr8.2:71396596-71396615 None:intergenic 40.0%
TTGCTTTAATGACCCCACAA+TGG - chr8.2:71396387-71396406 MS.gene82014:intron 40.0%
! GATGATGATGATGCCTCTAA+TGG + chr8.2:71396262-71396281 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG - chr8.2:71396264-71396283 MS.gene82014:intron 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG - chr8.2:71396314-71396333 MS.gene82014:intron 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG - chr8.2:71396299-71396318 MS.gene82014:intron 40.0%
!! TACCAAATTGGTGTCATTGG+TGG + chr8.2:71395670-71395689 None:intergenic 40.0%
!! TCGAATATGATTGGTGATGG+TGG - chr8.2:71395821-71395840 MS.gene82014:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG + chr8.2:71395615-71395634 None:intergenic 40.0%
AACTGAGGCTTCTAGGCAAT+TGG - chr8.2:71396363-71396382 MS.gene82014:intron 45.0%
ATGGACAAACTGAGGCTTCT+AGG - chr8.2:71396356-71396375 MS.gene82014:intron 45.0%
ATGGTGATAGCATGTGGTGA+TGG - chr8.2:71396283-71396302 MS.gene82014:intron 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG - chr8.2:71395837-71395856 MS.gene82014:CDS 45.0%
CACCACCAATGACACCAATT+TGG - chr8.2:71395665-71395684 MS.gene82014:CDS 45.0%
CTTGAACCATGGGACATTCA+AGG - chr8.2:71395200-71395219 MS.gene82014:CDS 45.0%
TCACTGGCATAGTCATGTGA+GGG + chr8.2:71396541-71396560 None:intergenic 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG - chr8.2:71395838-71395857 MS.gene82014:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG + chr8.2:71395913-71395932 None:intergenic 45.0%
AAAACCCTAGACAGCCCTTC+TGG - chr8.2:71395896-71395915 MS.gene82014:intron 50.0%
AAGAAGGATGGGTGGTGTGT+AGG - chr8.2:71395849-71395868 MS.gene82014:CDS 50.0%
ACAAATGGGAAGGGGTTGCA+AGG - chr8.2:71395985-71396004 MS.gene82014:intron 50.0%
ATGCCAGTGAGATTGACCTC+TGG - chr8.2:71396551-71396570 MS.gene82014:CDS 50.0%
CTCAAGTTCCTCCTGGATTC+CGG - chr8.2:71395075-71395094 MS.gene82014:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG + chr8.2:71396542-71396561 None:intergenic 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG + chr8.2:71395914-71395933 None:intergenic 50.0%
GGACAATCTCAAGTTCCTCC+TGG - chr8.2:71395068-71395087 MS.gene82014:CDS 50.0%
GTATTCGACACGTGACACAG+TGG + chr8.2:71396619-71396638 None:intergenic 50.0%
GTTCCAGAGGTCAATCTCAC+TGG + chr8.2:71396557-71396576 None:intergenic 50.0%
GTTGGATGAAACCGGAATCC+AGG + chr8.2:71395089-71395108 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG - chr8.2:71395597-71395616 MS.gene82014:CDS 50.0%
TCGATCGAGCAAAGTTCCAG+AGG + chr8.2:71396570-71396589 None:intergenic 50.0%
TGGTCAAGAAGAAGGATGGG+TGG - chr8.2:71395841-71395860 MS.gene82014:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG - chr8.2:71395833-71395852 MS.gene82014:CDS 50.0%
!! GTGATAGCATGTGGTGATGG+TGG - chr8.2:71396286-71396305 MS.gene82014:intron 50.0%
CTCTCCAGAAGGGCTGTCTA+GGG + chr8.2:71395903-71395922 None:intergenic 55.0%
GGATGAAACCGGAATCCAGG+AGG + chr8.2:71395086-71395105 None:intergenic 55.0%
TGTGGCTTTCCAGAACCCTG+CGG + chr8.2:71395514-71395533 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG - chr8.2:71395902-71395921 MS.gene82014:intron 55.0%
!! AGCGCGATTGGTTCGTGTTC+CGG + chr8.2:71395487-71395506 None:intergenic 55.0%
!! CGATTGGTTCGTGTTCCGGT+TGG + chr8.2:71395483-71395502 None:intergenic 55.0%
CCTCTCCAGAAGGGCTGTCT+AGG + chr8.2:71395904-71395923 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG - chr8.2:71395901-71395920 MS.gene82014:intron 60.0%
!! GCAGGGTTCTGGAAAGCCAC+AGG - chr8.2:71395513-71395532 MS.gene82014:CDS 60.0%
ACCAATCGCGCTACAGCCGC+AGG - chr8.2:71395495-71395514 MS.gene82014:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG - chr8.2:71395496-71395515 MS.gene82014:CDS 65.0%
CCCTGCGGCTGTAGCGCGAT+TGG + chr8.2:71395499-71395518 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG - chr8.2:71395502-71395521 MS.gene82014:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 71395038 71396648 71395038 ID=MS.gene82014
chr8.2 mRNA 71395038 71396648 71395038 ID=MS.gene82014.t1;Parent=MS.gene82014
chr8.2 exon 71396465 71396648 71396465 ID=MS.gene82014.t1.exon1;Parent=MS.gene82014.t1
chr8.2 CDS 71396465 71396648 71396465 ID=cds.MS.gene82014.t1;Parent=MS.gene82014.t1
chr8.2 exon 71396000 71396274 71396000 ID=MS.gene82014.t1.exon2;Parent=MS.gene82014.t1
chr8.2 CDS 71396000 71396274 71396000 ID=cds.MS.gene82014.t1;Parent=MS.gene82014.t1
chr8.2 exon 71395038 71395868 71395038 ID=MS.gene82014.t1.exon3;Parent=MS.gene82014.t1
chr8.2 CDS 71395038 71395868 71395038 ID=cds.MS.gene82014.t1;Parent=MS.gene82014.t1
Gene Sequence

>MS.gene82014

ATGCCTGATAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCCGGTTTCATCCAACTGAAGAAGAGCTTCTTCAATACTACTTGAGGAAAAAAGTCTCTTATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATTCAAGGTAATATAAATATAACTAGCTAACTATATACCTTTATTTATTTCTTCATTCATTTTTATTTTTGTTAAGTTTATTTATCCTTTTCTTTATTCCTTTGATTTATTTCTTCAAGTGGAAGACAATAAATATATACTGGAATATTGTATCGTGTTTTTTATTTTGTGGTTTTTTTTTATCCTCTTCTTTGTAGAGAAATGCAAAATAGGAACAACTCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCAACCGGAACACGAACCAATCGCGCTACAGCCGCAGGGTTCTGGAAAGCCACAGGTCGTGACAAAGTTATATATAGCAATGGAAAAAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGTCGTGCTCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGACTCGACGATAACACCACCAATGACACCAATTTGGTAAGTATTAGATACAAATATACGTCTGGATAAACAACTTAATTAAGAACTTCGTTAAATGATACTTATGTATATACTTATATAGTAAATAAATTGGTTAAATTGTTTTCTTTATTGCGACAAAATTTTAGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGACAGCCCTTCTGGAGAGGGAAGAAGAAGCCATCACTTGTATGATACTTGTGATGAAGGAGCTTTGGAGCAAATACTTCAACAAATGGGAAGGGGTTGCAAGGAAGAGAATTATGAAGCAAATTACAATAATAATTATGGAAGGTTTGCAAGGCCTTTTGAATCTACTCTCAACAACAATGGTGGTTATAATAATGAAAGGTTCATGAAACTTCCAAACTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATGATGGGTACCATGCAATTATTCAAGTAGATATGGCTAATGAAAATGAAGGGTCATTCTCTGATCATCATCATAACATGGTTAATAATCCATTAGAGGCATCATCATCATCAATGGTGATAGCATGTGGTGATGGTGGTCTTACTAATTGGGTAGCTTTGGATAGGCTTGTTGCTTCTCAATTGAATGGACAAACTGAGGCTTCTAGGCAATTGGCTTGCTTTAATGACCCCACAATGGGATATTGCACTAATGATCAAGATCTTCAACTTCCCACCCTTAAATCATCATCATCAACTTCATCACTATCAACACAAGTCAGAGCTACTACTACTTCTACTACTACTACAGCTACTACTTACATTAGTCCCTCACATGACTATGCCAGTGAGATTGACCTCTGGAACTTTGCTCGATCGACTTCCTCGTTGTTGTCATCTTCTGAACCACTGTGTCACGTGTCGAATACGTCAGTGTGA
Protein sequence

>MS.gene82014.t1

MPDNMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPSGEGRRSHHLYDTCDEGALEQILQQMGRGCKEENYEANYNNNYGRFARPFESTLNNNGGYNNERFMKLPNLESPKSTSMENNENNNDGYHAIIQVDMANENEGSFSDHHHNMVNNPLEASSSSMVIACGDGGLTNWVALDRLVASQLNGQTEASRQLACFNDPTMGYCTNDQDLQLPTLKSSSSTSSLSTQVRATTTSTTTTATTYISPSHDYASEIDLWNFARSTSSLLSSSEPLCHVSNTSV