Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68433.t1 | KEH43309.1 | 97 | 957 | 28 | 1 | 1 | 956 | 1 | 957 | 0.00E+00 | 1888.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68433.t1 | Q8GTR4 | 69.3 | 923 | 277 | 2 | 37 | 954 | 42 | 963 | 0.0e+00 | 1322.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68433.t1 | A0A072VMS0 | 97.0 | 957 | 28 | 1 | 1 | 956 | 1 | 957 | 0.0e+00 | 1888.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051171 | MS.gene68433 | 0.805176 | 1.52E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene68433 | 0.807069 | 6.05E-50 | -1.69E-46 |
| MS.gene055370 | MS.gene68433 | 0.800045 | 1.73E-48 | -1.69E-46 |
| MS.gene056633 | MS.gene68433 | 0.823292 | 1.50E-53 | -1.69E-46 |
| MS.gene057196 | MS.gene68433 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene058746 | MS.gene68433 | 0.839662 | 1.39E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68433.t1 | MTR_1g090693 | 96.970 | 957 | 28 | 1 | 1 | 956 | 1 | 957 | 0.0 | 1925 |
| MS.gene68433.t1 | MTR_3g099500 | 30.168 | 358 | 193 | 14 | 280 | 621 | 200 | 516 | 2.78e-22 | 103 |
| MS.gene68433.t1 | MTR_3g099500 | 29.076 | 368 | 201 | 13 | 280 | 621 | 200 | 533 | 5.27e-22 | 102 |
| MS.gene68433.t1 | MTR_8g101490 | 23.412 | 551 | 283 | 23 | 280 | 777 | 172 | 636 | 2.32e-17 | 87.8 |
| MS.gene68433.t1 | MTR_8g101490 | 27.797 | 295 | 149 | 15 | 280 | 552 | 172 | 424 | 4.69e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68433.t1 | AT5G04360 | 71.429 | 882 | 251 | 1 | 73 | 954 | 83 | 963 | 0.0 | 1337 |
| MS.gene68433.t1 | AT5G04360 | 71.429 | 882 | 251 | 1 | 73 | 954 | 83 | 963 | 0.0 | 1337 |
| MS.gene68433.t1 | AT4G09020 | 26.186 | 485 | 226 | 18 | 323 | 770 | 235 | 624 | 2.91e-23 | 106 |
| MS.gene68433.t1 | AT2G39930 | 25.466 | 483 | 264 | 18 | 323 | 777 | 217 | 631 | 1.96e-18 | 91.3 |
| MS.gene68433.t1 | AT2G39930 | 25.466 | 483 | 264 | 18 | 323 | 777 | 217 | 631 | 6.21e-18 | 89.4 |
| MS.gene68433.t1 | AT2G39930 | 26.410 | 390 | 214 | 15 | 323 | 686 | 217 | 559 | 1.24e-15 | 82.0 |
Find 254 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGACATTGTGAGCTTAA+AGG | 0.181249 | 1.1:+66194681 | MS.gene68433:CDS |
| GATGGTCATGATGGCTTTCC+TGG | 0.187776 | 1.1:+66196329 | MS.gene68433:CDS |
| TCTTAAACCTGTTGCGTATA+AGG | 0.214452 | 1.1:+66195923 | MS.gene68433:CDS |
| AATCTTGCTGGAACACAAAT+TGG | 0.219718 | 1.1:+66190929 | MS.gene68433:CDS |
| TTACATACAATTCCAATAAC+TGG | 0.246376 | 1.1:+66195430 | MS.gene68433:CDS |
| ACTGGACCATCGCTGGTTTC+TGG | 0.249604 | 1.1:+66196284 | MS.gene68433:CDS |
| AAAGGTACAACCCTGTTCTT+TGG | 0.254002 | 1.1:+66189062 | MS.gene68433:intron |
| ATCTGAGAAAGAATGTAAAA+TGG | 0.261799 | 1.1:-66187718 | None:intergenic |
| CTCAAGAGGAACAATTTCTA+TGG | 0.266292 | 1.1:-66187339 | None:intergenic |
| TATTGTACTCAAGAGCTTAT+TGG | 0.266539 | 1.1:+66185483 | MS.gene68433:CDS |
| GCATTTATGAATTGCATATA+AGG | 0.271022 | 1.1:+66187745 | MS.gene68433:CDS |
| AGTTATATCCATCAAAGTTT+TGG | 0.272406 | 1.1:-66188957 | None:intergenic |
| GAATACACTTACAGTCTCTA+TGG | 0.277135 | 1.1:-66194462 | None:intergenic |
| AAGACCAACACCCCAGTTAT+TGG | 0.280956 | 1.1:-66195442 | None:intergenic |
| TTATCTTGCCTTTACTTTGA+TGG | 0.287158 | 1.1:+66188183 | MS.gene68433:CDS |
| TTACTTGCATAGCTGCCTTT+AGG | 0.287306 | 1.1:-66189091 | None:intergenic |
| AATTGCATATAAGGGATTTC+AGG | 0.294083 | 1.1:+66187754 | MS.gene68433:CDS |
| ATTGTACTCAAGAGCTTATT+GGG | 0.294199 | 1.1:+66185484 | MS.gene68433:CDS |
| TTGCCAACATTTCAATTTGC+TGG | 0.298068 | 1.1:+66188426 | MS.gene68433:CDS |
| TCAAAATATGAGGCTTCTTC+TGG | 0.304044 | 1.1:+66196676 | MS.gene68433:CDS |
| AATGTTGATCATCATCAAAA+TGG | 0.306446 | 1.1:+66185530 | MS.gene68433:CDS |
| ATTTGGCCACCCTCTTCAAC+AGG | 0.307402 | 1.1:+66191290 | MS.gene68433:CDS |
| CATAAATAACAACCGCCAAC+TGG | 0.312601 | 1.1:-66186744 | None:intergenic |
| TACAATCATTTGCAGGGAAA+TGG | 0.314634 | 1.1:+66189354 | MS.gene68433:CDS |
| TACTTGCATAGCTGCCTTTA+GGG | 0.319608 | 1.1:-66189090 | None:intergenic |
| ATTGAAGATTTCTTGATTGC+AGG | 0.319654 | 1.1:-66196518 | None:intergenic |
| CTTTCCTGGGTTGTCTCAGC+TGG | 0.320329 | 1.1:+66196343 | MS.gene68433:CDS |
| GAAGGGAAAGAAAGTGAAAA+TGG | 0.334303 | 1.1:-66185182 | None:intergenic |
| AAGGTACAACCCTGTTCTTT+GGG | 0.334500 | 1.1:+66189063 | MS.gene68433:intron |
| AAAGGGTGTATTACATTTGC+AGG | 0.339070 | 1.1:-66186093 | None:intergenic |
| AAAACTTTGATGGATATAAC+TGG | 0.339150 | 1.1:+66188959 | MS.gene68433:CDS |
| AGATAACCACCGCGAAATTC+AGG | 0.345010 | 1.1:-66188166 | None:intergenic |
| CGAAACTCAATTGTACGGTT+TGG | 0.349317 | 1.1:-66189124 | None:intergenic |
| GCTTCTCAGTTCAATCTTGC+TGG | 0.349733 | 1.1:+66190917 | MS.gene68433:CDS |
| TACTGTCTACAATCATTTGC+AGG | 0.352877 | 1.1:+66189347 | MS.gene68433:CDS |
| TTGAGGAGGAACACGGTGTT+TGG | 0.355434 | 1.1:+66187357 | MS.gene68433:CDS |
| GGGTTCAGATTTGACCTTAT+GGG | 0.356426 | 1.1:+66190123 | MS.gene68433:CDS |
| CATTTATGAATTGCATATAA+GGG | 0.359251 | 1.1:+66187746 | MS.gene68433:CDS |
| ATTTCTAATTCTCAAATTCA+AGG | 0.359701 | 1.1:+66185593 | MS.gene68433:CDS |
| ATTGAAATGTTGGCAATAGA+TGG | 0.361387 | 1.1:-66188419 | None:intergenic |
| TGGGTTCAGATTTGACCTTA+TGG | 0.365737 | 1.1:+66190122 | MS.gene68433:CDS |
| ATCCTATTTCTGCAGCCTAA+TGG | 0.365977 | 1.1:+66191686 | MS.gene68433:intron |
| TCTTCAATTGCATCCCGTTC+AGG | 0.367312 | 1.1:+66196533 | MS.gene68433:CDS |
| TGAGTTTCGTAAGATGGTTC+AGG | 0.374682 | 1.1:+66189138 | MS.gene68433:CDS |
| ATTGTACGGTTTGGACCATT+TGG | 0.375344 | 1.1:-66189115 | None:intergenic |
| GTTCAAAGAAGCATCTTTGC+TGG | 0.377209 | 1.1:-66185570 | None:intergenic |
| CGAATTCGTGATTCCGTGCT+TGG | 0.380874 | 1.1:+66191258 | MS.gene68433:CDS |
| TGTATCTTATAGATTGTTCC+AGG | 0.381127 | 1.1:+66189538 | MS.gene68433:intron |
| ACAGCCATCCAAAACTTTGA+TGG | 0.383081 | 1.1:+66188949 | MS.gene68433:CDS |
| AAGAGAACTAATATCTGAAC+TGG | 0.387617 | 1.1:-66186713 | None:intergenic |
| GACTGGCAGACCCATCCTTC+AGG | 0.389756 | 1.1:+66195863 | MS.gene68433:CDS |
| GTGCTTGGTGGATCTCCATT+TGG | 0.393201 | 1.1:+66191273 | MS.gene68433:CDS |
| TACAATTGAGTTTCGTAAGA+TGG | 0.394970 | 1.1:+66189132 | MS.gene68433:CDS |
| TGTACTGGTTTGCAGTTACC+TGG | 0.404064 | 1.1:+66187072 | MS.gene68433:CDS |
| TTAGGGACACCCCAAAGAAC+AGG | 0.407237 | 1.1:-66189073 | None:intergenic |
| TGTTAAGAGTTCAAAATATG+AGG | 0.409680 | 1.1:+66196666 | MS.gene68433:CDS |
| TCAAACTACTTCCATTTCTC+AGG | 0.410019 | 1.1:+66185346 | MS.gene68433:CDS |
| AAAGAAAAGGATGGAGTTGA+TGG | 0.412794 | 1.1:+66190687 | MS.gene68433:CDS |
| GTTCTTTGGGGTGTCCCTAA+AGG | 0.412927 | 1.1:+66189076 | MS.gene68433:CDS |
| ATCCATGCTTTCTGCATCAA+TGG | 0.413531 | 1.1:+66191739 | MS.gene68433:CDS |
| TGCCAACATTTCAATTTGCT+GGG | 0.414102 | 1.1:+66188427 | MS.gene68433:CDS |
| ATGTTGATCATCATCAAAAT+GGG | 0.418159 | 1.1:+66185531 | MS.gene68433:CDS |
| CTATAACACTTGTTGCCAAA+TGG | 0.418707 | 1.1:-66194848 | None:intergenic |
| GTTTATTAGATTGGAATGGC+TGG | 0.421115 | 1.1:+66192479 | MS.gene68433:intron |
| TCTGAGAAAGAATGTAAAAT+GGG | 0.421282 | 1.1:-66187717 | None:intergenic |
| ACCTGATGGATGGGAAAATC+TGG | 0.421396 | 1.1:+66187683 | MS.gene68433:CDS |
| AGAGAAGAAGAAAGAGGTGG+TGG | 0.422195 | 1.1:-66185305 | None:intergenic |
| TGAGGATTTGAAAATTAAGC+TGG | 0.425602 | 1.1:+66186050 | MS.gene68433:CDS |
| AAGGATGGGTCTGCCAGTCT+TGG | 0.429846 | 1.1:-66195859 | None:intergenic |
| AATTAAGCTGGAAGAGGATA+AGG | 0.430838 | 1.1:+66186062 | MS.gene68433:CDS |
| AAGAATACCTTATACGCAAC+AGG | 0.431710 | 1.1:-66195930 | None:intergenic |
| GTTCCATGATCATAGCCATT+AGG | 0.433887 | 1.1:-66191701 | None:intergenic |
| ACACTGGGCAGTCAATTATA+AGG | 0.435933 | 1.1:+66189669 | MS.gene68433:CDS |
| TTGATGATCAAAAGGAGAAC+TGG | 0.439290 | 1.1:+66188451 | MS.gene68433:CDS |
| TCCTTTGAGGCCTGAAGGAT+GGG | 0.439467 | 1.1:-66195873 | None:intergenic |
| ACAATCATTTGCAGGGAAAT+GGG | 0.440654 | 1.1:+66189355 | MS.gene68433:CDS |
| TTGCAGGCTCTTAGTCATAC+TGG | 0.444576 | 1.1:+66189306 | MS.gene68433:intron |
| TCTGATAGATACGTCGGTAC+TGG | 0.447407 | 1.1:+66188885 | MS.gene68433:intron |
| TGAACATTCTGTCCTTGATA+AGG | 0.447650 | 1.1:+66189386 | MS.gene68433:CDS |
| TACATCTATAAGCACCCATC+AGG | 0.449510 | 1.1:+66187308 | MS.gene68433:CDS |
| TAAACATACCCTCTAGCATA+TGG | 0.454189 | 1.1:-66187482 | None:intergenic |
| TGCTGGGGTTGATGATCAAA+AGG | 0.454795 | 1.1:+66188443 | MS.gene68433:CDS |
| TCACTCAATCTCTTATTGCT+TGG | 0.455402 | 1.1:+66185507 | MS.gene68433:CDS |
| GTTTGAATAAACCTGAGAAA+TGG | 0.456732 | 1.1:-66185357 | None:intergenic |
| ATGTCAATACCTCTTGTCCT+TGG | 0.461640 | 1.1:-66192532 | None:intergenic |
| CAGCCTAATGGCTATGATCA+TGG | 0.464027 | 1.1:+66191698 | MS.gene68433:intron |
| TACCTCTTGTCCTTGGGAGT+TGG | 0.464514 | 1.1:-66192525 | None:intergenic |
| TTTCAACCCGCGAAGTGCTC+GGG | 0.465175 | 1.1:-66187442 | None:intergenic |
| TACCGCGAGTGAGCACTCTA+TGG | 0.467059 | 1.1:+66189618 | MS.gene68433:CDS |
| CACGGTGTTTGGAGAACTAA+AGG | 0.468439 | 1.1:+66187368 | MS.gene68433:CDS |
| ATCGAGATTCATACAACTCC+GGG | 0.468527 | 1.1:+66195186 | MS.gene68433:CDS |
| GCTTGTTGCTGATCTGAATC+AGG | 0.471188 | 1.1:-66188919 | None:intergenic |
| GTATAGCATTTGCCGTCCTC+AGG | 0.472135 | 1.1:-66195966 | None:intergenic |
| ATTCATACAACTCCGGGGAT+TGG | 0.472633 | 1.1:+66195192 | MS.gene68433:CDS |
| AGCTGTATCACTTTACTTGT+GGG | 0.473509 | 1.1:+66187152 | MS.gene68433:CDS |
| TGCATCAATGGATCACATCC+AGG | 0.473959 | 1.1:+66191751 | MS.gene68433:CDS |
| GATAATTCCTGACCTTATCA+AGG | 0.480992 | 1.1:-66189398 | None:intergenic |
| GAGGACGGCAAATGCTATAC+AGG | 0.481199 | 1.1:+66195969 | MS.gene68433:CDS |
| GGGTATGAGGCAAATGCAAC+GGG | 0.483297 | 1.1:-66194440 | None:intergenic |
| CCAACGTTTAACAAAAGAAA+AGG | 0.483690 | 1.1:+66190674 | MS.gene68433:CDS |
| ATCTTGCTGGAACACAAATT+GGG | 0.485543 | 1.1:+66190930 | MS.gene68433:CDS |
| TACAGTCTCTATGGGGTATG+AGG | 0.485942 | 1.1:-66194453 | None:intergenic |
| GAAGAAAGAGAAGAAGAAAG+AGG | 0.486025 | 1.1:-66185311 | None:intergenic |
| TGTCAATACCTCTTGTCCTT+GGG | 0.487085 | 1.1:-66192531 | None:intergenic |
| TGTTGAAGAGGGTGGCCAAA+TGG | 0.487491 | 1.1:-66191288 | None:intergenic |
| TTCCAGGTTACTATCTAAGA+AGG | 0.491500 | 1.1:+66189554 | MS.gene68433:CDS |
| TCCTCGATGATCTTGTACAC+TGG | 0.494343 | 1.1:+66189653 | MS.gene68433:CDS |
| GGGTGTTGGTCTTCCTCCAC+AGG | 0.494683 | 1.1:+66195452 | MS.gene68433:CDS |
| AGTGAAGGACGAGGGAATGA+TGG | 0.494890 | 1.1:-66185227 | None:intergenic |
| AGATTTCTTGATTGCAGGGA+AGG | 0.495120 | 1.1:-66196513 | None:intergenic |
| TGATGGAAGAAGATTGAGGT+TGG | 0.496207 | 1.1:-66185210 | None:intergenic |
| ATTCGTGATTCCGTGCTTGG+TGG | 0.497022 | 1.1:+66191261 | MS.gene68433:CDS |
| ACCCCAGCAAATTGAAATGT+TGG | 0.497846 | 1.1:-66188429 | None:intergenic |
| GAAAGTGATTGTACCTGAAC+GGG | 0.499135 | 1.1:-66196546 | None:intergenic |
| TTTGAAAATTAAGCTGGAAG+AGG | 0.499156 | 1.1:+66186056 | MS.gene68433:CDS |
| TTGAAGATTTCTTGATTGCA+GGG | 0.499401 | 1.1:-66196517 | None:intergenic |
| TCTTCTTAAATCCCAGTTGG+CGG | 0.499715 | 1.1:+66186732 | MS.gene68433:CDS |
| ACTCCGGGGATTGGTTCAAC+AGG | 0.500414 | 1.1:+66195201 | MS.gene68433:CDS |
| GAGATGCAGGATAAACCATT+TGG | 0.500912 | 1.1:+66194833 | MS.gene68433:CDS |
| GGGTCGGAAGTATTAACATA+TGG | 0.501335 | 1.1:+66194410 | MS.gene68433:CDS |
| ATCCTTTGAGGCCTGAAGGA+TGG | 0.501907 | 1.1:-66195874 | None:intergenic |
| AGAAATTGTCCATTGTAGCT+AGG | 0.503045 | 1.1:-66195903 | None:intergenic |
| TCAGTGTGGCTGAGAGATGC+AGG | 0.503417 | 1.1:+66194820 | MS.gene68433:CDS |
| GAGAAGAAGAAAGAGGTGGT+GGG | 0.504187 | 1.1:-66185304 | None:intergenic |
| TACTGGCCTTCGTGTTGTGT+TGG | 0.505611 | 1.1:+66189323 | MS.gene68433:CDS |
| GCTAATGATCCATATGCTAG+AGG | 0.506432 | 1.1:+66187473 | MS.gene68433:CDS |
| TACATACAATTCCAATAACT+GGG | 0.506875 | 1.1:+66195431 | MS.gene68433:CDS |
| TTCTCTTCTTAAATCCCAGT+TGG | 0.507410 | 1.1:+66186729 | MS.gene68433:CDS |
| GCTCAGCTGATGAGAAATGC+AGG | 0.508969 | 1.1:+66187046 | MS.gene68433:intron |
| AGAAGAAGAAAGAGGTGGTG+GGG | 0.509162 | 1.1:-66185303 | None:intergenic |
| AAGCATCTTTGCTGGAAAGT+AGG | 0.511681 | 1.1:-66185562 | None:intergenic |
| GAGAAATTTCCACACATTCG+AGG | 0.514797 | 1.1:+66186667 | MS.gene68433:CDS |
| GCTAGGATGTCAATCCTTTG+AGG | 0.514911 | 1.1:-66195886 | None:intergenic |
| AAGGAGAACTGGAGAAATGT+TGG | 0.516865 | 1.1:+66188462 | MS.gene68433:CDS |
| CCTCGATGATCTTGTACACT+GGG | 0.517069 | 1.1:+66189654 | MS.gene68433:CDS |
| AAGCTGTATCACTTTACTTG+TGG | 0.517453 | 1.1:+66187151 | MS.gene68433:CDS |
| AAGGATTACCATCAAAGTAA+AGG | 0.517953 | 1.1:-66188191 | None:intergenic |
| CATAGAAATTGTTCCTCTTG+AGG | 0.518870 | 1.1:+66187340 | MS.gene68433:CDS |
| TCACAACACTGGACCATCGC+TGG | 0.519979 | 1.1:+66196277 | MS.gene68433:CDS |
| ATGGTCATGATGGCTTTCCT+GGG | 0.520278 | 1.1:+66196330 | MS.gene68433:CDS |
| CTAAAGAAATTATCAAGTGC+GGG | 0.526067 | 1.1:+66188384 | MS.gene68433:CDS |
| TCATGTTTATTAGATTGGAA+TGG | 0.526733 | 1.1:+66192475 | MS.gene68433:intron |
| GATTTCTTGATTGCAGGGAA+GGG | 0.527032 | 1.1:-66196512 | None:intergenic |
| ACCCATCCTTCAGGCCTCAA+AGG | 0.528067 | 1.1:+66195872 | MS.gene68433:CDS |
| AGGACAGAATGTTCATCAAA+GGG | 0.528465 | 1.1:-66189378 | None:intergenic |
| GATTGAGGTTGGAAATTGAA+GGG | 0.530581 | 1.1:-66185199 | None:intergenic |
| TATGGTGAAGGATGGGACTT+TGG | 0.531936 | 1.1:+66190863 | MS.gene68433:CDS |
| CTAACAAATGATATTTCTTG+TGG | 0.533664 | 1.1:-66196489 | None:intergenic |
| GTCACAAAACCCTGTTGAAG+AGG | 0.535691 | 1.1:-66191300 | None:intergenic |
| GCAGACTTTCATCAGACGGC+AGG | 0.535852 | 1.1:+66187622 | MS.gene68433:intron |
| AATTCCAATAACTGGGGTGT+TGG | 0.536708 | 1.1:+66195438 | MS.gene68433:CDS |
| AAAACAGATATGGTGAAGGA+TGG | 0.537753 | 1.1:+66190855 | MS.gene68433:intron |
| CTATGGGATCATCTCCTGAT+GGG | 0.539056 | 1.1:-66187322 | None:intergenic |
| GGAAGGTACAGTGAAGGACG+AGG | 0.540346 | 1.1:-66185236 | None:intergenic |
| GTCAATCCTTTGAGGCCTGA+AGG | 0.542746 | 1.1:-66195878 | None:intergenic |
| GATACTCCGCTCAAAATCAC+TGG | 0.543487 | 1.1:+66195163 | MS.gene68433:CDS |
| TATACCACCCGAGCACTTCG+CGG | 0.543517 | 1.1:+66187435 | MS.gene68433:CDS |
| AGATTGAGGTTGGAAATTGA+AGG | 0.543706 | 1.1:-66185200 | None:intergenic |
| AATACACTTACAGTCTCTAT+GGG | 0.543898 | 1.1:-66194461 | None:intergenic |
| TGGAAAGTAGTAGATGAAGA+AGG | 0.545285 | 1.1:-66185257 | None:intergenic |
| AGAAAATATACTTGAGCGGT+AGG | 0.545851 | 1.1:-66187177 | None:intergenic |
| TCTTCATTATATGACCCATA+AGG | 0.548661 | 1.1:-66190137 | None:intergenic |
| TTTCAGAATGAAACCAAGAC+TGG | 0.549922 | 1.1:+66195846 | MS.gene68433:intron |
| AGCTATGCAAGTAATCCAAA+TGG | 0.550803 | 1.1:+66189100 | MS.gene68433:CDS |
| TCTTACGAAACTCAATTGTA+CGG | 0.551046 | 1.1:-66189129 | None:intergenic |
| TCCATCAGGTTTCAACTCAT+CGG | 0.551583 | 1.1:-66187670 | None:intergenic |
| TAAGCTCACAATGTCAAAGA+GGG | 0.552824 | 1.1:-66194677 | None:intergenic |
| AAGGACAGAATGTTCATCAA+AGG | 0.554747 | 1.1:-66189379 | None:intergenic |
| GCCGTCCTCAGGCGGAAAAG+TGG | 0.554849 | 1.1:-66195955 | None:intergenic |
| AAGTAGTAGATGAAGAAGGA+AGG | 0.555513 | 1.1:-66185253 | None:intergenic |
| TCCGATGAGTTGAAACCTGA+TGG | 0.558445 | 1.1:+66187669 | MS.gene68433:CDS |
| TCAAGAGGAACAATTTCTAT+GGG | 0.559947 | 1.1:-66187338 | None:intergenic |
| TCTATGGGATCATCTCCTGA+TGG | 0.560305 | 1.1:-66187323 | None:intergenic |
| TCTGTGCAGCCTGAATTTCG+CGG | 0.561682 | 1.1:+66188157 | MS.gene68433:CDS |
| TCGGAAGTATTAACATATGG+TGG | 0.569218 | 1.1:+66194413 | MS.gene68433:CDS |
| TGAAAGTGATTGTACCTGAA+CGG | 0.570977 | 1.1:-66196547 | None:intergenic |
| GAGAAATGCAGGGACTGTAC+TGG | 0.571550 | 1.1:+66187057 | MS.gene68433:CDS |
| CTAATGATCCATATGCTAGA+GGG | 0.572308 | 1.1:+66187474 | MS.gene68433:CDS |
| ATCCATTGATGCAGAAAGCA+TGG | 0.572725 | 1.1:-66191741 | None:intergenic |
| AAACAGATATGGTGAAGGAT+GGG | 0.572848 | 1.1:+66190856 | MS.gene68433:intron |
| GATCGAGATTCATACAACTC+CGG | 0.574564 | 1.1:+66195185 | MS.gene68433:CDS |
| TCTAAAGAAATTATCAAGTG+CGG | 0.576534 | 1.1:+66188383 | MS.gene68433:CDS |
| ATACCTGTTGAACCAATCCC+CGG | 0.577271 | 1.1:-66195204 | None:intergenic |
| ATGAGTTGAAACCTGATGGA+TGG | 0.577800 | 1.1:+66187673 | MS.gene68433:CDS |
| CAACCCGCGAAGTGCTCGGG+TGG | 0.578847 | 1.1:-66187439 | None:intergenic |
| ACACCGTGTTCCTCCTCAAG+AGG | 0.582367 | 1.1:-66187353 | None:intergenic |
| ACGGTGTTTGGAGAACTAAA+GGG | 0.582788 | 1.1:+66187369 | MS.gene68433:CDS |
| GGGGTATGAGGCAAATGCAA+CGG | 0.586241 | 1.1:-66194441 | None:intergenic |
| AAATGGAGATCCACCAAGCA+CGG | 0.587147 | 1.1:-66191271 | None:intergenic |
| AGGCTGCACAGAGAGATCAT+TGG | 0.587643 | 1.1:-66188146 | None:intergenic |
| ATAAATAACAACCGCCAACT+GGG | 0.590711 | 1.1:-66186743 | None:intergenic |
| AAACTTTGATGGATATAACT+GGG | 0.593002 | 1.1:+66188960 | MS.gene68433:CDS |
| CAGCTGTGTTCGTCGAGCCA+AGG | 0.598123 | 1.1:+66196725 | MS.gene68433:CDS |
| TTTGGCCACCCTCTTCAACA+GGG | 0.599209 | 1.1:+66191291 | MS.gene68433:CDS |
| GAAGAAGGAAGGTACAGTGA+AGG | 0.600053 | 1.1:-66185242 | None:intergenic |
| ATACCACCCGAGCACTTCGC+GGG | 0.601456 | 1.1:+66187436 | MS.gene68433:CDS |
| AACCAACTCCCAAGGACAAG+AGG | 0.601989 | 1.1:+66192523 | MS.gene68433:CDS |
| TAGCATTTGCCGTCCTCAGG+CGG | 0.604532 | 1.1:-66195963 | None:intergenic |
| CGAGTACGCTTTCACAACAC+TGG | 0.604677 | 1.1:+66196266 | MS.gene68433:CDS |
| GCTTTGTAACCTCGAATGTG+TGG | 0.606246 | 1.1:-66186676 | None:intergenic |
| TTAAGCAGACTTTCATCAGA+CGG | 0.607912 | 1.1:+66187618 | MS.gene68433:intron |
| GACTTTCATCAGACGGCAGG+CGG | 0.608491 | 1.1:+66187625 | MS.gene68433:intron |
| TTAAGCTCACAATGTCAAAG+AGG | 0.608541 | 1.1:-66194678 | None:intergenic |
| GTTCCTCTTGAGGAGGAACA+CGG | 0.610875 | 1.1:+66187350 | MS.gene68433:CDS |
| TTCCTTCTTAGATAGTAACC+TGG | 0.611688 | 1.1:-66189556 | None:intergenic |
| GAACTAATATCTGAACTGGA+AGG | 0.614512 | 1.1:-66186709 | None:intergenic |
| GGTGTATTACATTTGCAGGA+AGG | 0.615206 | 1.1:-66186089 | None:intergenic |
| AAGTGTTATAGCATTATCAC+AGG | 0.618531 | 1.1:+66194860 | MS.gene68433:CDS |
| CGTTTAACAAAAGAAAAGGA+TGG | 0.620727 | 1.1:+66190678 | MS.gene68433:CDS |
| ATAGTGATGAGCATTGAAGA+TGG | 0.621334 | 1.1:+66196311 | MS.gene68433:CDS |
| AGCATTGAAGATGGTCATGA+TGG | 0.623024 | 1.1:+66196320 | MS.gene68433:CDS |
| CTCAGCTGATGAGAAATGCA+GGG | 0.623428 | 1.1:+66187047 | MS.gene68433:intron |
| TCACAAAACCCTGTTGAAGA+GGG | 0.624283 | 1.1:-66191299 | None:intergenic |
| GAAAGAGAAGAAGAAAGAGG+TGG | 0.624466 | 1.1:-66185308 | None:intergenic |
| TATTCACTTTCAGACTCCGT+CGG | 0.625705 | 1.1:+66194794 | MS.gene68433:intron |
| CGGAAGTATTAACATATGGT+GGG | 0.626066 | 1.1:+66194414 | MS.gene68433:CDS |
| AGAAATTGTTCCTCTTGAGG+AGG | 0.628595 | 1.1:+66187343 | MS.gene68433:CDS |
| GCCAACATTTCAATTTGCTG+GGG | 0.628938 | 1.1:+66188428 | MS.gene68433:CDS |
| TATCTAAGAAGGAACACAGA+TGG | 0.629387 | 1.1:+66189565 | MS.gene68433:CDS |
| ACTGTCTACAATCATTTGCA+GGG | 0.631190 | 1.1:+66189348 | MS.gene68433:CDS |
| TGAGTTGAAACCTGATGGAT+GGG | 0.632039 | 1.1:+66187674 | MS.gene68433:CDS |
| GATTGACATCCTAGCTACAA+TGG | 0.635719 | 1.1:+66195894 | MS.gene68433:CDS |
| AACCATAGAGTGCTCACTCG+CGG | 0.635769 | 1.1:-66189620 | None:intergenic |
| AACTTTGATGGATATAACTG+GGG | 0.637519 | 1.1:+66188961 | MS.gene68433:CDS |
| CAAAACCCTGTTGAAGAGGG+TGG | 0.637841 | 1.1:-66191296 | None:intergenic |
| TAGGGACACCCCAAAGAACA+GGG | 0.638095 | 1.1:-66189072 | None:intergenic |
| AAAAGCTCATCTAAAACACC+AGG | 0.639357 | 1.1:-66187090 | None:intergenic |
| AGGTACAACCCTGTTCTTTG+GGG | 0.639374 | 1.1:+66189064 | MS.gene68433:intron |
| TTTGTACTAACCAACTCCCA+AGG | 0.641013 | 1.1:+66192515 | MS.gene68433:CDS |
| AAGCTGGAAGAGGATAAGGC+TGG | 0.643162 | 1.1:+66186066 | MS.gene68433:CDS |
| TGTTGATCATCATCAAAATG+GGG | 0.643992 | 1.1:+66185532 | MS.gene68433:CDS |
| CACCATTCTGATAGATACGT+CGG | 0.645570 | 1.1:+66188879 | MS.gene68433:intron |
| GGAAGTAGTTTGATCGACAG+AGG | 0.652097 | 1.1:-66185336 | None:intergenic |
| GGAATGATGGAAGAAGATTG+AGG | 0.653567 | 1.1:-66185214 | None:intergenic |
| TGTTGCTGATCTGAATCAGG+TGG | 0.655693 | 1.1:-66188916 | None:intergenic |
| GTGCAGCCTGAATTTCGCGG+TGG | 0.661169 | 1.1:+66188160 | MS.gene68433:CDS |
| TCAGCCACACTGATATCCGA+CGG | 0.662189 | 1.1:-66194810 | None:intergenic |
| GAATGCGAAGTGAAGTAGTG+TGG | 0.667419 | 1.1:-66185277 | None:intergenic |
| TGGAAGAAAATATACTTGAG+CGG | 0.673604 | 1.1:-66187181 | None:intergenic |
| TTGCTGGAACACAAATTGGG+AGG | 0.682244 | 1.1:+66190933 | MS.gene68433:CDS |
| GGATCCAGCTGAGACAACCC+AGG | 0.682593 | 1.1:-66196347 | None:intergenic |
| ACATACAATTCCAATAACTG+GGG | 0.685335 | 1.1:+66195432 | MS.gene68433:CDS |
| GAAGGTACAGTGAAGGACGA+GGG | 0.701785 | 1.1:-66185235 | None:intergenic |
| TCATATAATGAAGAGTACAA+TGG | 0.703829 | 1.1:+66190146 | MS.gene68433:CDS |
| ACTTTGATGGATATAACTGG+GGG | 0.707527 | 1.1:+66188962 | MS.gene68433:CDS |
| TCTGAGAAAAGTGCACCGAG+TGG | 0.708335 | 1.1:-66187126 | None:intergenic |
| GACTCCGTCGGATATCAGTG+TGG | 0.715396 | 1.1:+66194806 | MS.gene68433:intron |
| TGTTGGCAATAGATGGACAT+GGG | 0.721283 | 1.1:-66188412 | None:intergenic |
| ATGTTGGCAATAGATGGACA+TGG | 0.721857 | 1.1:-66188413 | None:intergenic |
| ATGACTCCAGAAACCAGCGA+TGG | 0.732163 | 1.1:-66196290 | None:intergenic |
| ATACACTTACAGTCTCTATG+GGG | 0.740403 | 1.1:-66194460 | None:intergenic |
| CAGTATCCAACACAACACGA+AGG | 0.750779 | 1.1:-66189329 | None:intergenic |
| TCGAGATTCATACAACTCCG+GGG | 0.753701 | 1.1:+66195187 | MS.gene68433:CDS |
| CCCAGTGTACAAGATCATCG+AGG | 0.774079 | 1.1:-66189654 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66185161 | 66196756 | 66185161 | ID=MS.gene68433 |
| chr1.1 | mRNA | 66185161 | 66196756 | 66185161 | ID=MS.gene68433.t1;Parent=MS.gene68433 |
| chr1.1 | exon | 66185161 | 66185367 | 66185161 | ID=MS.gene68433.t1.exon1;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66185161 | 66185367 | 66185161 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66185467 | 66185614 | 66185467 | ID=MS.gene68433.t1.exon2;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66185467 | 66185614 | 66185467 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66186049 | 66186101 | 66186049 | ID=MS.gene68433.t1.exon3;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66186049 | 66186101 | 66186049 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66186661 | 66186769 | 66186661 | ID=MS.gene68433.t1.exon4;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66186661 | 66186769 | 66186661 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66187052 | 66187188 | 66187052 | ID=MS.gene68433.t1.exon5;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66187052 | 66187188 | 66187052 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66187296 | 66187495 | 66187296 | ID=MS.gene68433.t1.exon6;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66187296 | 66187495 | 66187296 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66187626 | 66187775 | 66187626 | ID=MS.gene68433.t1.exon7;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66187626 | 66187775 | 66187626 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66188144 | 66188204 | 66188144 | ID=MS.gene68433.t1.exon8;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66188144 | 66188204 | 66188144 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66188363 | 66188483 | 66188363 | ID=MS.gene68433.t1.exon9;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66188363 | 66188483 | 66188363 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66188893 | 66188983 | 66188893 | ID=MS.gene68433.t1.exon10;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66188893 | 66188983 | 66188893 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66189066 | 66189159 | 66189066 | ID=MS.gene68433.t1.exon11;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66189066 | 66189159 | 66189066 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66189312 | 66189407 | 66189312 | ID=MS.gene68433.t1.exon12;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66189312 | 66189407 | 66189312 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66189550 | 66189690 | 66189550 | ID=MS.gene68433.t1.exon13;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66189550 | 66189690 | 66189550 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66190117 | 66190167 | 66190117 | ID=MS.gene68433.t1.exon14;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66190117 | 66190167 | 66190117 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66190654 | 66190724 | 66190654 | ID=MS.gene68433.t1.exon15;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66190654 | 66190724 | 66190654 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66190862 | 66190954 | 66190862 | ID=MS.gene68433.t1.exon16;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66190862 | 66190954 | 66190862 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66191248 | 66191338 | 66191248 | ID=MS.gene68433.t1.exon17;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66191248 | 66191338 | 66191248 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66191701 | 66191772 | 66191701 | ID=MS.gene68433.t1.exon18;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66191701 | 66191772 | 66191701 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66192488 | 66192544 | 66192488 | ID=MS.gene68433.t1.exon19;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66192488 | 66192544 | 66192488 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66194404 | 66194472 | 66194404 | ID=MS.gene68433.t1.exon20;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66194404 | 66194472 | 66194404 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66194646 | 66194702 | 66194646 | ID=MS.gene68433.t1.exon21;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66194646 | 66194702 | 66194646 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66194807 | 66194881 | 66194807 | ID=MS.gene68433.t1.exon22;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66194807 | 66194881 | 66194807 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66195134 | 66195222 | 66195134 | ID=MS.gene68433.t1.exon23;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66195134 | 66195222 | 66195134 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66195422 | 66195499 | 66195422 | ID=MS.gene68433.t1.exon24;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66195422 | 66195499 | 66195422 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66195852 | 66195990 | 66195852 | ID=MS.gene68433.t1.exon25;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66195852 | 66195990 | 66195852 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66196263 | 66196372 | 66196263 | ID=MS.gene68433.t1.exon26;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66196263 | 66196372 | 66196263 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66196455 | 66196554 | 66196455 | ID=MS.gene68433.t1.exon27;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66196455 | 66196554 | 66196455 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| chr1.1 | exon | 66196646 | 66196756 | 66196646 | ID=MS.gene68433.t1.exon28;Parent=MS.gene68433.t1 |
| chr1.1 | CDS | 66196646 | 66196756 | 66196646 | ID=cds.MS.gene68433.t1;Parent=MS.gene68433.t1 |
| Gene Sequence |
| Protein sequence |
