Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68586.t1 | XP_013458374.1 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.70E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68586.t1 | Q94A32 | 72.9 | 107 | 29 | 0 | 123 | 229 | 134 | 240 | 1.3e-37 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68586.t1 | B7FFA9 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.0e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050762 | MS.gene68586 | -0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene68586 | -0.806526 | 7.88E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68586.t1 | MTR_4g123593 | 93.886 | 229 | 13 | 1 | 1 | 229 | 1 | 228 | 7.76e-121 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68586.t1 | AT3G43520 | 69.748 | 119 | 35 | 1 | 111 | 229 | 123 | 240 | 4.17e-51 | 166 |
| MS.gene68586.t1 | AT2G26240 | 63.810 | 105 | 38 | 0 | 124 | 228 | 4 | 108 | 3.63e-38 | 129 |
Find 76 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGTCAAATTGACTGGTTT+TGG | 0.265563 | 8.2:+9410135 | None:intergenic |
| GAAATCAGGGAAGGTCTTTC+CGG | 0.282767 | 8.2:-9407767 | MS.gene68586:CDS |
| GGAGTGTGGGATCGGGTTGT+AGG | 0.296999 | 8.2:+9410256 | None:intergenic |
| GGTTCTCGTTTCAAGAAATC+AGG | 0.336113 | 8.2:-9407781 | MS.gene68586:CDS |
| AAAGGAAACGGAGACGATTT+CGG | 0.340053 | 8.2:-9410070 | MS.gene68586:CDS |
| TTGACAGCGGGTGGTGTAAT+GGG | 0.345679 | 8.2:-9408766 | MS.gene68586:intron |
| TGATGCAAGAACAGGTCTTC+CGG | 0.347788 | 8.2:+9408660 | None:intergenic |
| TTTGACAGCGGGTGGTGTAA+TGG | 0.350276 | 8.2:-9408767 | MS.gene68586:intron |
| TGGCAGCCAGAAGTCGCTTT+TGG | 0.351977 | 8.2:-9408731 | MS.gene68586:CDS |
| AAGGATCTGACGGTGATAAA+AGG | 0.360224 | 8.2:-9409985 | MS.gene68586:CDS |
| GGTGGTGGTGGTGAAGGAGG+AGG | 0.373824 | 8.2:-9410037 | MS.gene68586:CDS |
| GGTGGTGAAGGAGGAGGCGG+AGG | 0.375033 | 8.2:-9410031 | MS.gene68586:CDS |
| TGCTGCACTTCTTGTGGTGA+TGG | 0.380439 | 8.2:-9407803 | MS.gene68586:CDS |
| CCCCAGCCAAAAGCGACTTC+TGG | 0.386183 | 8.2:+9408725 | None:intergenic |
| GCCGCCGGTAATGTCTAAAT+CGG | 0.388850 | 8.2:+9410105 | None:intergenic |
| GGTGGTGGTGAAGGAGGAGG+CGG | 0.392210 | 8.2:-9410034 | MS.gene68586:CDS |
| CCGCCGGTAATGTCTAAATC+GGG | 0.413389 | 8.2:+9410106 | None:intergenic |
| TAGTGGTGGGAGTGTGGGAT+CGG | 0.421797 | 8.2:+9410248 | None:intergenic |
| GACGATTTCGGCGGAGGAGG+TGG | 0.426057 | 8.2:-9410058 | MS.gene68586:CDS |
| CTTGCATCATCTGTGGGCCT+TGG | 0.426584 | 8.2:-9408646 | MS.gene68586:intron |
| GATGCAAGAACAGGTCTTCC+GGG | 0.430490 | 8.2:+9408661 | None:intergenic |
| GAGAAATAGTGGTGGGAGTG+TGG | 0.440353 | 8.2:+9410242 | None:intergenic |
| GCTGCACTTCTTGTGGTGAT+GGG | 0.443502 | 8.2:-9407802 | MS.gene68586:CDS |
| AGCGAGTTGAGAATGTGAAT+TGG | 0.445867 | 8.2:+9410174 | None:intergenic |
| GGCGGAGGAGGTGGTGGTGG+TGG | 0.449465 | 8.2:-9410049 | MS.gene68586:CDS |
| AGTGGTGGGAGTGTGGGATC+GGG | 0.454693 | 8.2:+9410249 | None:intergenic |
| TTCGGCGGAGGAGGTGGTGG+TGG | 0.461763 | 8.2:-9410052 | MS.gene68586:CDS |
| GATTTCGGCGGAGGAGGTGG+TGG | 0.468875 | 8.2:-9410055 | MS.gene68586:CDS |
| GACAAGTAAGGGAAAGAAGC+AGG | 0.472035 | 8.2:+9410202 | None:intergenic |
| GGCACTTAGGTCAAATTGAC+TGG | 0.474158 | 8.2:+9410129 | None:intergenic |
| ACCTGTTCTTGCATCATCTG+TGG | 0.483230 | 8.2:-9408653 | MS.gene68586:CDS |
| AACGGAGACGATTTCGGCGG+AGG | 0.486679 | 8.2:-9410064 | MS.gene68586:CDS |
| AGAAGCAGGAGAAGCAAGGA+AGG | 0.489884 | 8.2:+9410216 | None:intergenic |
| CCCACAGATGATGCAAGAAC+AGG | 0.490656 | 8.2:+9408652 | None:intergenic |
| CTAGGTTATGCTATTCTCGT+TGG | 0.491350 | 8.2:-9409929 | MS.gene68586:CDS |
| AAGGAAGGAGCGAGAAATAG+TGG | 0.498256 | 8.2:+9410231 | None:intergenic |
| AACAGGTCTTCCGGGTAGCT+CGG | 0.505808 | 8.2:+9408669 | None:intergenic |
| TTTGATATCACCGCCGCCGC+CGG | 0.506217 | 8.2:+9410090 | None:intergenic |
| TTAGACATTACCGGCGGCGG+CGG | 0.514783 | 8.2:-9410100 | MS.gene68586:CDS |
| GGTTATGCTATTCTCGTTGG+AGG | 0.515433 | 8.2:-9409926 | MS.gene68586:intron |
| CCTGTTCTTGCATCATCTGT+GGG | 0.521720 | 8.2:-9408652 | MS.gene68586:CDS |
| GGAGACGATTTCGGCGGAGG+AGG | 0.526381 | 8.2:-9410061 | MS.gene68586:CDS |
| GAGTGTGGGATCGGGTTGTA+GGG | 0.536706 | 8.2:+9410257 | None:intergenic |
| GGCGGTGATATCAAAGGAAA+CGG | 0.540755 | 8.2:-9410082 | MS.gene68586:CDS |
| GATAGTAACAAAGGCGAGGA+AGG | 0.548487 | 8.2:-9410004 | MS.gene68586:CDS |
| CATATCTGCTGCACTTCTTG+TGG | 0.550309 | 8.2:-9407809 | MS.gene68586:CDS |
| AAGGAGCGAGAAATAGTGGT+GGG | 0.557007 | 8.2:+9410235 | None:intergenic |
| TCAGGGAAGGTCTTTCCGGC+AGG | 0.561022 | 8.2:-9407763 | MS.gene68586:CDS |
| CTTGTGTCGTTCATAATGAC+CGG | 0.562716 | 8.2:-9407730 | MS.gene68586:CDS |
| ACAAGTGACACAACACCTGC+CGG | 0.564042 | 8.2:+9407748 | None:intergenic |
| AGAAATAGTGGTGGGAGTGT+GGG | 0.564262 | 8.2:+9410243 | None:intergenic |
| GGTTGTAGGGCGAAGAGAGA+GGG | 0.564448 | 8.2:+9410270 | None:intergenic |
| ATGACCGGTGGTTACTTGCA+TGG | 0.564829 | 8.2:-9407715 | MS.gene68586:CDS |
| GTAGGGCGAAGAGAGAGGGA+AGG | 0.571612 | 8.2:+9410274 | None:intergenic |
| TGACGGTGATAAAAGGAAGA+TGG | 0.578241 | 8.2:-9409978 | MS.gene68586:CDS |
| ATGTCGCAGAAATTAACTCT+AGG | 0.581649 | 8.2:-9409947 | MS.gene68586:CDS |
| GAATTGGAAAGAGACAAGTA+AGG | 0.589380 | 8.2:+9410190 | None:intergenic |
| GATTTAGACATTACCGGCGG+CGG | 0.591983 | 8.2:-9410103 | MS.gene68586:CDS |
| CGCCGGTAATGTCTAAATCG+GGG | 0.604362 | 8.2:+9410107 | None:intergenic |
| GGAAAGAAGCAGGAGAAGCA+AGG | 0.608774 | 8.2:+9410212 | None:intergenic |
| AATTGGAAAGAGACAAGTAA+GGG | 0.611539 | 8.2:+9410191 | None:intergenic |
| GGCGGCGGCGGTGATATCAA+AGG | 0.624581 | 8.2:-9410088 | MS.gene68586:CDS |
| GTTCTCGTTTCAAGAAATCA+GGG | 0.628947 | 8.2:-9407780 | MS.gene68586:CDS |
| TCGTTTCAAGAAATCAGGGA+AGG | 0.630412 | 8.2:-9407776 | MS.gene68586:CDS |
| GCCGGTAATGTCTAAATCGG+GGG | 0.634119 | 8.2:+9410108 | None:intergenic |
| GTAATGGGCTTTCTGAAGAG+TGG | 0.639725 | 8.2:-9408751 | MS.gene68586:CDS |
| AATTCCATGCAAGTAACCAC+CGG | 0.644415 | 8.2:+9407711 | None:intergenic |
| AAAGGCGAGGAAGGATCTGA+CGG | 0.645896 | 8.2:-9409995 | MS.gene68586:CDS |
| AGACGATAGTAACAAAGGCG+AGG | 0.650186 | 8.2:-9410008 | MS.gene68586:CDS |
| GAAGGAGCGAGAAATAGTGG+TGG | 0.655482 | 8.2:+9410234 | None:intergenic |
| CCCGATTTAGACATTACCGG+CGG | 0.658939 | 8.2:-9410106 | MS.gene68586:CDS |
| GGAGGAGACGATAGTAACAA+AGG | 0.659434 | 8.2:-9410013 | MS.gene68586:CDS |
| GGGTTGTAGGGCGAAGAGAG+AGG | 0.659984 | 8.2:+9410269 | None:intergenic |
| GTGTCGTTCATAATGACCGG+TGG | 0.667012 | 8.2:-9407727 | MS.gene68586:CDS |
| GTCAATGGCAGAAACTGCAG+CGG | 0.675091 | 8.2:-9410323 | None:intergenic |
| GGAAACGGAGACGATTTCGG+CGG | 0.728758 | 8.2:-9410067 | MS.gene68586:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAATTATTTAACA+TGG | - | chr8.2:9409546-9409565 | MS.gene68586:intron | 10.0% |
| !!! | TTTATTTTGGAATATTATTT+TGG | - | chr8.2:9410007-9410026 | MS.gene68586:CDS | 10.0% |
| !! | AAAAAATTATTTAACATGGA+TGG | - | chr8.2:9409550-9409569 | MS.gene68586:intron | 15.0% |
| !! | CTACATAATGATATTTATTT+GGG | - | chr8.2:9409221-9409240 | MS.gene68586:intron | 15.0% |
| !! | TAATATTCCAAAATAAATTC+AGG | + | chr8.2:9410004-9410023 | None:intergenic | 15.0% |
| !! | TCTACATAATGATATTTATT+TGG | - | chr8.2:9409220-9409239 | MS.gene68586:intron | 15.0% |
| !! | TTTCTTATGTTAGTTATTTA+AGG | - | chr8.2:9408292-9408311 | MS.gene68586:intron | 15.0% |
| !! | ATAAACTGGAATAAATTGTA+TGG | - | chr8.2:9408900-9408919 | MS.gene68586:intron | 20.0% |
| !! | ATAGATAAGTGTTTATAAGT+GGG | + | chr8.2:9408742-9408761 | None:intergenic | 20.0% |
| !! | GATATTTGACAACATTAAAT+TGG | - | chr8.2:9409026-9409045 | MS.gene68586:intron | 20.0% |
| !!! | AGTTTTTTATCCATACTTTA+AGG | - | chr8.2:9409738-9409757 | MS.gene68586:intron | 20.0% |
| !!! | TTCTAAAAAACCTTAAAGTA+TGG | + | chr8.2:9409751-9409770 | None:intergenic | 20.0% |
| ! | AATTCCTCCATATAATATTG+CGG | - | chr8.2:9408492-9408511 | MS.gene68586:intron | 25.0% |
| ! | ATTATCGTCGTTATCAAATA+TGG | + | chr8.2:9409940-9409959 | None:intergenic | 25.0% |
| ! | CATAGATAAGTGTTTATAAG+TGG | + | chr8.2:9408743-9408762 | None:intergenic | 25.0% |
| ! | GAAATAAAATCTCACAAAAC+CGG | - | chr8.2:9408696-9408715 | MS.gene68586:CDS | 25.0% |
| ! | TAGATAAGTGTTTATAAGTG+GGG | + | chr8.2:9408741-9408760 | None:intergenic | 25.0% |
| ! | TAGTTATAGATCAGTTTCTA+GGG | + | chr8.2:9408158-9408177 | None:intergenic | 25.0% |
| ! | TCTTAAAGTCTTAAGAACAA+AGG | - | chr8.2:9409503-9409522 | MS.gene68586:intron | 25.0% |
| ! | TTAGTTATAGATCAGTTTCT+AGG | + | chr8.2:9408159-9408178 | None:intergenic | 25.0% |
| !! | GAATAAACTCTTTTACTGTT+GGG | - | chr8.2:9409450-9409469 | MS.gene68586:intron | 25.0% |
| !! | TGAATAAACTCTTTTACTGT+TGG | - | chr8.2:9409449-9409468 | MS.gene68586:intron | 25.0% |
| !!! | GTTTTGAATTTACCTTCAAT+TGG | - | chr8.2:9408192-9408211 | MS.gene68586:intron | 25.0% |
| AAACATTAACACATGAGAGA+AGG | + | chr8.2:9410160-9410179 | None:intergenic | 30.0% | |
| AATATGAAGTGTAGAGTTCA+GGG | + | chr8.2:9409704-9409723 | None:intergenic | 30.0% | |
| AATTGGAAAGAGACAAGTAA+GGG | + | chr8.2:9407824-9407843 | None:intergenic | 30.0% | |
| AATTGTATGGAAATTCCATG+TGG | - | chr8.2:9408913-9408932 | MS.gene68586:intron | 30.0% | |
| AGATAAGTGTTTATAAGTGG+GGG | + | chr8.2:9408740-9408759 | None:intergenic | 30.0% | |
| AGTTAGAATGAAGAACATGT+TGG | - | chr8.2:9408218-9408237 | MS.gene68586:intron | 30.0% | |
| ATTGTATGGAAATTCCATGT+GGG | - | chr8.2:9408914-9408933 | MS.gene68586:intron | 30.0% | |
| GCAAACTCTTTATGAGTTTA+CGG | - | chr8.2:9410036-9410055 | MS.gene68586:CDS | 30.0% | |
| GGAATTTCATATGTATCAGA+AGG | - | chr8.2:9409524-9409543 | MS.gene68586:intron | 30.0% | |
| GTAAAAGAGTTTATTCAGAC+AGG | + | chr8.2:9409446-9409465 | None:intergenic | 30.0% | |
| TAATATGAAGTGTAGAGTTC+AGG | + | chr8.2:9409705-9409724 | None:intergenic | 30.0% | |
| TATGTTGCAAATTGTTCAAC+TGG | - | chr8.2:9409801-9409820 | MS.gene68586:intron | 30.0% | |
| ! | GTGAATTGTAAAGCATTCTT+TGG | - | chr8.2:9409674-9409693 | MS.gene68586:intron | 30.0% |
| !! | ATTTATTTGGGTTTTGACAG+CGG | - | chr8.2:9409233-9409252 | MS.gene68586:intron | 30.0% |
| !! | GATCATTTTTCCTGATGTAT+AGG | - | chr8.2:9410180-9410199 | MS.gene68586:CDS | 30.0% |
| !! | GTTTCTTTGCTTTGAAGTTT+AGG | - | chr8.2:9409903-9409922 | MS.gene68586:intron | 30.0% |
| !!! | AACATGTTTTGTTTGTGTTG+TGG | - | chr8.2:9408866-9408885 | MS.gene68586:intron | 30.0% |
| !!! | ACATGTTTTGTTTGTGTTGT+GGG | - | chr8.2:9408867-9408886 | MS.gene68586:intron | 30.0% |
| ACAATGATGCATCATTCCAT+TGG | - | chr8.2:9409835-9409854 | MS.gene68586:intron | 35.0% | |
| ACATAGCCATGTCTAAATTC+TGG | - | chr8.2:9409638-9409657 | MS.gene68586:intron | 35.0% | |
| AGACTCTTTAACAGATAGTG+AGG | - | chr8.2:9408782-9408801 | MS.gene68586:intron | 35.0% | |
| ATATGAAGTGTAGAGTTCAG+GGG | + | chr8.2:9409703-9409722 | None:intergenic | 35.0% | |
| ATGTCGCAGAAATTAACTCT+AGG | - | chr8.2:9408065-9408084 | MS.gene68586:intron | 35.0% | |
| ATTCTAACTCAGCCAATTGA+AGG | + | chr8.2:9408207-9408226 | None:intergenic | 35.0% | |
| CATAATTCGTTTGATGCCTT+TGG | + | chr8.2:9409785-9409804 | None:intergenic | 35.0% | |
| GAATTGGAAAGAGACAAGTA+AGG | + | chr8.2:9407825-9407844 | None:intergenic | 35.0% | |
| GAGAAGACTGATACAACTAT+TGG | + | chr8.2:9408456-9408475 | None:intergenic | 35.0% | |
| GATGTCAAATATCTTTGTGG+AGG | - | chr8.2:9408957-9408976 | MS.gene68586:intron | 35.0% | |
| GCAAATTGTTCAACTGGTTA+TGG | - | chr8.2:9409807-9409826 | MS.gene68586:intron | 35.0% | |
| GTTCTCGTTTCAAGAAATCA+GGG | - | chr8.2:9410232-9410251 | MS.gene68586:CDS | 35.0% | |
| TAGAACCTACCATTTACCAA+AGG | - | chr8.2:9409766-9409785 | MS.gene68586:intron | 35.0% | |
| TCCCCACTGTTCAAAATTTA+TGG | + | chr8.2:9408551-9408570 | None:intergenic | 35.0% | |
| TGGGGGAAATCAAAATAAAC+TGG | - | chr8.2:9408886-9408905 | MS.gene68586:intron | 35.0% | |
| TGTATCAGTCTTCTCAATAG+TGG | - | chr8.2:9408461-9408480 | MS.gene68586:intron | 35.0% | |
| ! | ATCAATTCTAGTTGCTCACA+AGG | + | chr8.2:9410106-9410125 | None:intergenic | 35.0% |
| ! | CTCGCTTCCTGAATTTATTT+TGG | - | chr8.2:9409994-9410013 | MS.gene68586:CDS | 35.0% |
| ! | GCCATAAATTTTGAACAGTG+GGG | - | chr8.2:9408547-9408566 | MS.gene68586:intron | 35.0% |
| ! | GGCCATAAATTTTGAACAGT+GGG | - | chr8.2:9408546-9408565 | MS.gene68586:intron | 35.0% |
| !! | TTTATTTGGGTTTTGACAGC+GGG | - | chr8.2:9409234-9409253 | MS.gene68586:intron | 35.0% |
| !! | TTTTTCGATTCCATGAAACG+AGG | - | chr8.2:9408615-9408634 | MS.gene68586:intron | 35.0% |
| !!! | ATGTTTTGTTTGTGTTGTGG+GGG | - | chr8.2:9408869-9408888 | MS.gene68586:intron | 35.0% |
| !!! | CATGTTTTGTTTGTGTTGTG+GGG | - | chr8.2:9408868-9408887 | MS.gene68586:intron | 35.0% |
| !!! | TAGGTCAAATTGACTGGTTT+TGG | + | chr8.2:9407880-9407899 | None:intergenic | 35.0% |
| AAAGGAAACGGAGACGATTT+CGG | - | chr8.2:9407942-9407961 | MS.gene68586:intron | 40.0% | |
| AAGGATCTGACGGTGATAAA+AGG | - | chr8.2:9408027-9408046 | MS.gene68586:intron | 40.0% | |
| AATTCCATGCAAGTAACCAC+CGG | + | chr8.2:9410304-9410323 | None:intergenic | 40.0% | |
| ACCATTGCACGAAATTTGTC+TGG | - | chr8.2:9408571-9408590 | MS.gene68586:intron | 40.0% | |
| AGAAAGAGATGATCGTAGGT+GGG | - | chr8.2:9408669-9408688 | MS.gene68586:CDS | 40.0% | |
| AGAGAGAAAGAGATGATCGT+AGG | - | chr8.2:9408665-9408684 | MS.gene68586:CDS | 40.0% | |
| AGAGCACAATTGTGTACCAA+TGG | + | chr8.2:9409854-9409873 | None:intergenic | 40.0% | |
| AGCAGATATGCCTATACATC+AGG | + | chr8.2:9410193-9410212 | None:intergenic | 40.0% | |
| AGTGCCGCAATATTATATGG+AGG | + | chr8.2:9408499-9408518 | None:intergenic | 40.0% | |
| ATTGCACGAAATTTGTCTGG+AGG | - | chr8.2:9408574-9408593 | MS.gene68586:intron | 40.0% | |
| CAACCTCCAGAATTTAGACA+TGG | + | chr8.2:9409647-9409666 | None:intergenic | 40.0% | |
| CGTTTGATGCCTTTGGTAAA+TGG | + | chr8.2:9409778-9409797 | None:intergenic | 40.0% | |
| CTAGGTTATGCTATTCTCGT+TGG | - | chr8.2:9408083-9408102 | MS.gene68586:intron | 40.0% | |
| CTTTAACAGATAGTGAGGCA+GGG | - | chr8.2:9408787-9408806 | MS.gene68586:intron | 40.0% | |
| GAGCTAGAAAAATTCCACAC+TGG | + | chr8.2:9409977-9409996 | None:intergenic | 40.0% | |
| GGGGATGTCAAATATCTTTG+TGG | - | chr8.2:9408954-9408973 | MS.gene68586:intron | 40.0% | |
| GGTTCTCGTTTCAAGAAATC+AGG | - | chr8.2:9410231-9410250 | MS.gene68586:CDS | 40.0% | |
| TAGCCATGTCTAAATTCTGG+AGG | - | chr8.2:9409641-9409660 | MS.gene68586:intron | 40.0% | |
| TCAAATATCTTTGTGGAGGC+AGG | - | chr8.2:9408961-9408980 | MS.gene68586:intron | 40.0% | |
| TCCAGACAAATTTCGTGCAA+TGG | + | chr8.2:9408575-9408594 | None:intergenic | 40.0% | |
| TCGTTTCAAGAAATCAGGGA+AGG | - | chr8.2:9410236-9410255 | MS.gene68586:CDS | 40.0% | |
| TCTGTTAAAGAGTCTCACCT+CGG | + | chr8.2:9408777-9408796 | None:intergenic | 40.0% | |
| TCTTTAACAGATAGTGAGGC+AGG | - | chr8.2:9408786-9408805 | MS.gene68586:intron | 40.0% | |
| TGACGGTGATAAAAGGAAGA+TGG | - | chr8.2:9408034-9408053 | MS.gene68586:intron | 40.0% | |
| TGATGCCTTTGGTAAATGGT+AGG | + | chr8.2:9409774-9409793 | None:intergenic | 40.0% | |
| TGGTACACAATTGTGCTCTT+TGG | - | chr8.2:9409855-9409874 | MS.gene68586:intron | 40.0% | |
| TTGCACGAAATTTGTCTGGA+GGG | - | chr8.2:9408575-9408594 | MS.gene68586:intron | 40.0% | |
| ! | AGCGAGTTGAGAATGTGAAT+TGG | + | chr8.2:9407841-9407860 | None:intergenic | 40.0% |
| ! | CTTGTGTCGTTCATAATGAC+CGG | - | chr8.2:9410282-9410301 | MS.gene68586:CDS | 40.0% |
| ! | GGGCCATAAATTTTGAACAG+TGG | - | chr8.2:9408545-9408564 | MS.gene68586:intron | 40.0% |
| !! | TATGTTTTTACCGAGCTACC+CGG | - | chr8.2:9409333-9409352 | MS.gene68586:intron | 40.0% |
| AAGGAAGGAGCGAGAAATAG+TGG | + | chr8.2:9407784-9407803 | None:intergenic | 45.0% | |
| AAGGAGCGAGAAATAGTGGT+GGG | + | chr8.2:9407780-9407799 | None:intergenic | 45.0% | |
| AATTTGTCTGGAGGGAGAGT+TGG | - | chr8.2:9408583-9408602 | MS.gene68586:intron | 45.0% | |
| ACCATACTTGTCTACCCACA+TGG | + | chr8.2:9408931-9408950 | None:intergenic | 45.0% | |
| ACCTGTTCTTGCATCATCTG+TGG | - | chr8.2:9409359-9409378 | MS.gene68586:intron | 45.0% | |
| AGACGATAGTAACAAAGGCG+AGG | - | chr8.2:9408004-9408023 | MS.gene68586:intron | 45.0% | |
| CACTGCCATCCTTCACTAAT+TGG | - | chr8.2:9408515-9408534 | MS.gene68586:intron | 45.0% | |
| CATATCTGCTGCACTTCTTG+TGG | - | chr8.2:9410203-9410222 | MS.gene68586:CDS | 45.0% | |
| CCTGTTCTTGCATCATCTGT+GGG | - | chr8.2:9409360-9409379 | MS.gene68586:intron | 45.0% | |
| CGATTCCATGAAACGAGGAA+GGG | - | chr8.2:9408620-9408639 | MS.gene68586:intron | 45.0% | |
| GAAAACCCTTCCTCGTTTCA+TGG | + | chr8.2:9408628-9408647 | None:intergenic | 45.0% | |
| GAAATCAGGGAAGGTCTTTC+CGG | - | chr8.2:9410245-9410264 | MS.gene68586:CDS | 45.0% | |
| GACAAGTAAGGGAAAGAAGC+AGG | + | chr8.2:9407813-9407832 | None:intergenic | 45.0% | |
| GAGAAAGAGATGATCGTAGG+TGG | - | chr8.2:9408668-9408687 | MS.gene68586:CDS | 45.0% | |
| GATAGTAACAAAGGCGAGGA+AGG | - | chr8.2:9408008-9408027 | MS.gene68586:intron | 45.0% | |
| GCAATATACACCTCACATGC+CGG | + | chr8.2:9408718-9408737 | None:intergenic | 45.0% | |
| GGAGGAGACGATAGTAACAA+AGG | - | chr8.2:9407999-9408018 | MS.gene68586:intron | 45.0% | |
| GGCACTTAGGTCAAATTGAC+TGG | + | chr8.2:9407886-9407905 | None:intergenic | 45.0% | |
| GGCAGTGCCGCAATATTATA+TGG | + | chr8.2:9408502-9408521 | None:intergenic | 45.0% | |
| GGCGGTGATATCAAAGGAAA+CGG | - | chr8.2:9407930-9407949 | MS.gene68586:intron | 45.0% | |
| GGTTATGCTATTCTCGTTGG+AGG | - | chr8.2:9408086-9408105 | MS.gene68586:intron | 45.0% | |
| GTGGGTAGACAAGTATGGTA+GGG | - | chr8.2:9408932-9408951 | MS.gene68586:intron | 45.0% | |
| TCAAATATCTGCCACCACAG+TGG | + | chr8.2:9409015-9409034 | None:intergenic | 45.0% | |
| TCCATGTGGGTAGACAAGTA+TGG | - | chr8.2:9408927-9408946 | MS.gene68586:intron | 45.0% | |
| TCGATTCCATGAAACGAGGA+AGG | - | chr8.2:9408619-9408638 | MS.gene68586:intron | 45.0% | |
| TCTATGTCATCTCTCAACCG+AGG | - | chr8.2:9408757-9408776 | MS.gene68586:CDS | 45.0% | |
| TGATGCAAGAACAGGTCTTC+CGG | + | chr8.2:9409355-9409374 | None:intergenic | 45.0% | |
| TGCCATCCTTCACTAATTGG+CGG | - | chr8.2:9408518-9408537 | MS.gene68586:intron | 45.0% | |
| TGGCTATGTTTCAGCCTTAG+CGG | + | chr8.2:9409627-9409646 | None:intergenic | 45.0% | |
| TGGGTAGACAAGTATGGTAG+GGG | - | chr8.2:9408933-9408952 | MS.gene68586:intron | 45.0% | |
| TGTGGGTAGACAAGTATGGT+AGG | - | chr8.2:9408931-9408950 | MS.gene68586:intron | 45.0% | |
| ! | AGAAATAGTGGTGGGAGTGT+GGG | + | chr8.2:9407772-9407791 | None:intergenic | 45.0% |
| ! | TTTAGCACTGAAGTCCAGTG+TGG | - | chr8.2:9409960-9409979 | MS.gene68586:CDS | 45.0% |
| !! | GTAATGGGCTTTCTGAAGAG+TGG | - | chr8.2:9409261-9409280 | MS.gene68586:intron | 45.0% |
| AAAGGCGAGGAAGGATCTGA+CGG | - | chr8.2:9408017-9408036 | MS.gene68586:intron | 50.0% | |
| AATATCTGCCACCACAGTGG+TGG | + | chr8.2:9409012-9409031 | None:intergenic | 50.0% | |
| ACAAGTGACACAACACCTGC+CGG | + | chr8.2:9410267-9410286 | None:intergenic | 50.0% | |
| AGAAGCAGGAGAAGCAAGGA+AGG | + | chr8.2:9407799-9407818 | None:intergenic | 50.0% | |
| AGCCAGACACAAGGTTGTGT+GGG | + | chr8.2:9408989-9409008 | None:intergenic | 50.0% | |
| AGCTCAGCAGTGACTTACCA+AGG | + | chr8.2:9409386-9409405 | None:intergenic | 50.0% | |
| ATGACCGGTGGTTACTTGCA+TGG | - | chr8.2:9410297-9410316 | MS.gene68586:CDS | 50.0% | |
| CACCGCCAATTAGTGAAGGA+TGG | + | chr8.2:9408523-9408542 | None:intergenic | 50.0% | |
| CCCACAGATGATGCAAGAAC+AGG | + | chr8.2:9409363-9409382 | None:intergenic | 50.0% | |
| CCCGATTTAGACATTACCGG+CGG | - | chr8.2:9407906-9407925 | MS.gene68586:intron | 50.0% | |
| CCGCCGGTAATGTCTAAATC+GGG | + | chr8.2:9407909-9407928 | None:intergenic | 50.0% | |
| CGCCGGTAATGTCTAAATCG+GGG | + | chr8.2:9407908-9407927 | None:intergenic | 50.0% | |
| CTTCACTAATTGGCGGTGCA+GGG | - | chr8.2:9408525-9408544 | MS.gene68586:intron | 50.0% | |
| GAAGGAGCGAGAAATAGTGG+TGG | + | chr8.2:9407781-9407800 | None:intergenic | 50.0% | |
| GATGCAAGAACAGGTCTTCC+GGG | + | chr8.2:9409354-9409373 | None:intergenic | 50.0% | |
| GATTTAGACATTACCGGCGG+CGG | - | chr8.2:9407909-9407928 | MS.gene68586:intron | 50.0% | |
| GCCCCCGATTTAGACATTAC+CGG | - | chr8.2:9407903-9407922 | MS.gene68586:intron | 50.0% | |
| GCCGCCGGTAATGTCTAAAT+CGG | + | chr8.2:9407910-9407929 | None:intergenic | 50.0% | |
| GCCGGTAATGTCTAAATCGG+GGG | + | chr8.2:9407907-9407926 | None:intergenic | 50.0% | |
| GCTGCACTTCTTGTGGTGAT+GGG | - | chr8.2:9410210-9410229 | MS.gene68586:CDS | 50.0% | |
| GGAAAGAAGCAGGAGAAGCA+AGG | + | chr8.2:9407803-9407822 | None:intergenic | 50.0% | |
| GGCTATGTTTCAGCCTTAGC+GGG | + | chr8.2:9409626-9409645 | None:intergenic | 50.0% | |
| GGGTAGACAAGTATGGTAGG+GGG | - | chr8.2:9408934-9408953 | MS.gene68586:intron | 50.0% | |
| GGTAGACAAGTATGGTAGGG+GGG | - | chr8.2:9408935-9408954 | MS.gene68586:intron | 50.0% | |
| TCTCACAAAACCGGCATGTG+AGG | - | chr8.2:9408705-9408724 | MS.gene68586:CDS | 50.0% | |
| TCTTGAGTTTCTGCCCGCTA+AGG | - | chr8.2:9409610-9409629 | MS.gene68586:intron | 50.0% | |
| TGCTGCACTTCTTGTGGTGA+TGG | - | chr8.2:9410209-9410228 | MS.gene68586:CDS | 50.0% | |
| TTGACAGCGGGTGGTGTAAT+GGG | - | chr8.2:9409246-9409265 | MS.gene68586:intron | 50.0% | |
| TTTGACAGCGGGTGGTGTAA+TGG | - | chr8.2:9409245-9409264 | MS.gene68586:intron | 50.0% | |
| ! | GAGAAATAGTGGTGGGAGTG+TGG | + | chr8.2:9407773-9407792 | None:intergenic | 50.0% |
| ! | GCAGAAACTGCAGCGGTTTT+CGG | - | chr8.2:9407696-9407715 | MS.gene68586:CDS | 50.0% |
| ! | GTGTCGTTCATAATGACCGG+TGG | - | chr8.2:9410285-9410304 | MS.gene68586:CDS | 50.0% |
| !! | ATTTGGGTTTTGACAGCGGG+TGG | - | chr8.2:9409237-9409256 | MS.gene68586:intron | 50.0% |
| !! | TGTCTAAATCGGGGGCACTT+AGG | + | chr8.2:9407899-9407918 | None:intergenic | 50.0% |
| AACAGGTCTTCCGGGTAGCT+CGG | + | chr8.2:9409346-9409365 | None:intergenic | 55.0% | |
| AGCCCACACAACCTTGTGTC+TGG | - | chr8.2:9408984-9409003 | MS.gene68586:intron | 55.0% | |
| CCTGCACCGCCAATTAGTGA+AGG | + | chr8.2:9408527-9408546 | None:intergenic | 55.0% | |
| CCTTCACTAATTGGCGGTGC+AGG | - | chr8.2:9408524-9408543 | MS.gene68586:intron | 55.0% | |
| CTTGCATCATCTGTGGGCCT+TGG | - | chr8.2:9409366-9409385 | MS.gene68586:intron | 55.0% | |
| GAGCCAGACACAAGGTTGTG+TGG | + | chr8.2:9408990-9409009 | None:intergenic | 55.0% | |
| GGAAACGGAGACGATTTCGG+CGG | - | chr8.2:9407945-9407964 | MS.gene68586:intron | 55.0% | |
| GGTTGTAGGGCGAAGAGAGA+GGG | + | chr8.2:9407745-9407764 | None:intergenic | 55.0% | |
| ! | GAGTGTGGGATCGGGTTGTA+GGG | + | chr8.2:9407758-9407777 | None:intergenic | 55.0% |
| ! | TAGTGGTGGGAGTGTGGGAT+CGG | + | chr8.2:9407767-9407786 | None:intergenic | 55.0% |
| !! | TGGCAGCCAGAAGTCGCTTT+TGG | - | chr8.2:9409281-9409300 | MS.gene68586:intron | 55.0% |
| !!! | AGCCAGAAGTCGCTTTTGGC+TGG | - | chr8.2:9409285-9409304 | MS.gene68586:intron | 55.0% |
| !!! | CAGAAGTCGCTTTTGGCTGG+GGG | - | chr8.2:9409288-9409307 | MS.gene68586:intron | 55.0% |
| !!! | CCAGAAGTCGCTTTTGGCTG+GGG | - | chr8.2:9409287-9409306 | MS.gene68586:intron | 55.0% |
| !!! | GCCAGAAGTCGCTTTTGGCT+GGG | - | chr8.2:9409286-9409305 | MS.gene68586:intron | 55.0% |
| AACGGAGACGATTTCGGCGG+AGG | - | chr8.2:9407948-9407967 | MS.gene68586:intron | 60.0% | |
| CCCCAGCCAAAAGCGACTTC+TGG | + | chr8.2:9409290-9409309 | None:intergenic | 60.0% | |
| GGGTTGTAGGGCGAAGAGAG+AGG | + | chr8.2:9407746-9407765 | None:intergenic | 60.0% | |
| GTAGGGCGAAGAGAGAGGGA+AGG | + | chr8.2:9407741-9407760 | None:intergenic | 60.0% | |
| TCAGGGAAGGTCTTTCCGGC+AGG | - | chr8.2:9410249-9410268 | MS.gene68586:CDS | 60.0% | |
| TTAGACATTACCGGCGGCGG+CGG | - | chr8.2:9407912-9407931 | MS.gene68586:intron | 60.0% | |
| TTTGATATCACCGCCGCCGC+CGG | + | chr8.2:9407925-9407944 | None:intergenic | 60.0% | |
| ! | AGTGGTGGGAGTGTGGGATC+GGG | + | chr8.2:9407766-9407785 | None:intergenic | 60.0% |
| ! | CAGTGGTGGAGCCAGACACA+AGG | + | chr8.2:9408998-9409017 | None:intergenic | 60.0% |
| ! | GGAGTGTGGGATCGGGTTGT+AGG | + | chr8.2:9407759-9407778 | None:intergenic | 60.0% |
| ! | TGTGTCTGGCTCCACCACTG+TGG | - | chr8.2:9408998-9409017 | MS.gene68586:intron | 60.0% |
| !! | GTCTGGAGGGAGAGTTGGTG+TGG | - | chr8.2:9408588-9408607 | MS.gene68586:intron | 60.0% |
| GACGATTTCGGCGGAGGAGG+TGG | - | chr8.2:9407954-9407973 | MS.gene68586:intron | 65.0% | |
| GATTTCGGCGGAGGAGGTGG+TGG | - | chr8.2:9407957-9407976 | MS.gene68586:intron | 65.0% | |
| GGAGACGATTTCGGCGGAGG+AGG | - | chr8.2:9407951-9407970 | MS.gene68586:intron | 65.0% | |
| GGCGGCGGCGGTGATATCAA+AGG | - | chr8.2:9407924-9407943 | MS.gene68586:intron | 65.0% | |
| ! | GGTGGTGGTGAAGGAGGAGG+CGG | - | chr8.2:9407978-9407997 | MS.gene68586:intron | 65.0% |
| ! | GTCTGGCTCCACCACTGTGG+TGG | - | chr8.2:9409001-9409020 | MS.gene68586:intron | 65.0% |
| !! | GGAGGTGGTGGTGGTGGTGA+AGG | - | chr8.2:9407969-9407988 | MS.gene68586:intron | 65.0% |
| !! | GGTGGTGGTGGTGAAGGAGG+AGG | - | chr8.2:9407975-9407994 | MS.gene68586:intron | 65.0% |
| !! | GGTGGTGGTGGTGGTGAAGG+AGG | - | chr8.2:9407972-9407991 | MS.gene68586:intron | 65.0% |
| GGTGGTGAAGGAGGAGGCGG+AGG | - | chr8.2:9407981-9408000 | MS.gene68586:intron | 70.0% | |
| ! | TTCGGCGGAGGAGGTGGTGG+TGG | - | chr8.2:9407960-9407979 | MS.gene68586:intron | 70.0% |
| !! | GGCGGAGGAGGTGGTGGTGG+TGG | - | chr8.2:9407963-9407982 | MS.gene68586:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 9407693 | 9410341 | 9407693 | ID=MS.gene68586 |
| chr8.2 | mRNA | 9407693 | 9410341 | 9407693 | ID=MS.gene68586.t1;Parent=MS.gene68586 |
| chr8.2 | exon | 9409927 | 9410341 | 9409927 | ID=MS.gene68586.t1.exon1;Parent=MS.gene68586.t1 |
| chr8.2 | CDS | 9409927 | 9410341 | 9409927 | ID=cds.MS.gene68586.t1;Parent=MS.gene68586.t1 |
| chr8.2 | exon | 9408647 | 9408781 | 9408647 | ID=MS.gene68586.t1.exon2;Parent=MS.gene68586.t1 |
| chr8.2 | CDS | 9408647 | 9408781 | 9408647 | ID=cds.MS.gene68586.t1;Parent=MS.gene68586.t1 |
| chr8.2 | exon | 9407693 | 9407832 | 9407693 | ID=MS.gene68586.t1.exon3;Parent=MS.gene68586.t1 |
| chr8.2 | CDS | 9407693 | 9407832 | 9407693 | ID=cds.MS.gene68586.t1;Parent=MS.gene68586.t1 |
| Gene Sequence |
| Protein sequence |
