AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68683

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68683.t1 MTR_2g449850 77.982 109 19 2 6 109 203 311 1.41e-51 172
MS.gene68683.t1 MTR_2g449850 67.692 65 20 1 117 180 33 97 2.38e-20 87.8
MS.gene68683.t1 MTR_3g434850 46.552 116 55 3 1 109 188 303 2.07e-25 101
MS.gene68683.t1 MTR_3g434850 64.912 57 20 0 124 180 33 89 8.97e-19 83.2
MS.gene68683.t1 MTR_7g021130 52.273 88 37 2 10 92 200 287 1.58e-22 94.0
MS.gene68683.t1 MTR_7g021130 52.459 61 28 1 121 180 29 89 6.74e-13 66.2
MS.gene68683.t1 MTR_8g099930 50.000 88 39 2 10 92 203 290 5.77e-21 89.4
MS.gene68683.t1 MTR_8g099930 55.357 56 25 0 125 180 37 92 6.36e-14 69.3
MS.gene68683.t1 MTR_3g498755 47.727 88 41 2 9 91 185 272 7.83e-20 86.3
MS.gene68683.t1 MTR_3g498755 52.542 59 27 1 123 180 16 74 6.17e-13 66.2
MS.gene68683.t1 MTR_1g040370 59.375 64 25 1 118 180 26 89 4.46e-18 81.3
MS.gene68683.t1 MTR_1g040370 49.206 63 27 2 8 65 195 257 4.05e-11 61.2
MS.gene68683.t1 MTR_1g021010 59.322 59 23 1 124 181 78 136 1.57e-14 71.2
MS.gene68683.t1 MTR_1g021020 59.322 59 23 1 124 181 80 138 1.92e-14 70.9
MS.gene68683.t1 MTR_1g102130 53.448 58 27 0 123 180 93 150 3.97e-14 70.1
MS.gene68683.t1 MTR_1g102130 37.647 85 48 2 12 91 236 320 1.47e-12 65.5
MS.gene68683.t1 MTR_4g089155 54.386 57 26 0 125 181 57 113 6.30e-14 69.3
MS.gene68683.t1 MTR_0075s0010 56.140 57 24 1 124 180 10 65 7.91e-14 68.6
MS.gene68683.t1 MTR_0075s0010 40.476 84 45 2 12 90 156 239 3.10e-13 67.0
MS.gene68683.t1 MTR_1g020090 55.932 59 25 1 124 181 92 150 7.92e-14 68.9
MS.gene68683.t1 MTR_3g090150 58.621 58 24 0 123 180 35 92 1.81e-13 68.2
MS.gene68683.t1 MTR_2g012850 56.140 57 25 0 125 181 39 95 2.87e-13 67.4
MS.gene68683.t1 MTR_2g012860 50.847 59 29 0 123 181 43 101 3.09e-13 67.4
MS.gene68683.t1 MTR_3g079630 55.000 60 26 1 123 181 79 138 3.92e-13 67.0
MS.gene68683.t1 MTR_5g072570 55.172 58 26 0 123 180 31 88 4.17e-13 67.0
MS.gene68683.t1 MTR_3g079560 50.746 67 31 2 117 181 72 138 8.21e-13 66.2
MS.gene68683.t1 MTR_3g079620 55.000 60 26 1 123 181 79 138 8.49e-13 66.2
MS.gene68683.t1 MTR_4g075150 49.153 59 30 0 125 183 38 96 1.68e-12 65.1
MS.gene68683.t1 MTR_4g075150 49.153 59 30 0 125 183 38 96 1.80e-12 65.1
MS.gene68683.t1 MTR_3g079570 53.333 60 27 1 123 181 80 139 1.80e-12 65.1
MS.gene68683.t1 MTR_3g079590 53.333 60 27 1 123 181 79 138 2.44e-12 64.7
MS.gene68683.t1 MTR_3g079600 50.769 65 30 2 119 181 72 136 6.78e-12 63.5
MS.gene68683.t1 MTR_3g090130 55.172 58 26 0 123 180 30 87 8.26e-12 63.2
MS.gene68683.t1 MTR_3g090130 29.577 142 74 6 10 146 201 321 3.42e-11 61.2
MS.gene68683.t1 MTR_7g013790 45.614 57 31 0 125 181 39 95 2.03e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68683.t1 AT1G28110 54.023 87 35 2 10 91 201 287 2.91e-23 95.9
MS.gene68683.t1 AT1G28110 57.143 56 24 0 125 180 35 90 4.83e-15 72.4
MS.gene68683.t1 AT1G28110 54.023 87 35 2 10 91 201 287 2.91e-23 95.9
MS.gene68683.t1 AT1G28110 57.143 56 24 0 125 180 35 90 4.83e-15 72.4
MS.gene68683.t1 AT2G33530 54.023 87 35 2 10 91 203 289 3.69e-23 95.5
MS.gene68683.t1 AT2G33530 61.224 49 19 0 125 173 37 85 1.88e-14 70.9
MS.gene68683.t1 AT1G61130 56.140 57 25 0 125 181 35 91 3.26e-13 67.4
MS.gene68683.t1 AT5G42230 55.172 58 26 0 123 180 30 87 3.01e-12 64.3
MS.gene68683.t1 AT5G42230 35.238 105 62 3 10 109 201 304 9.76e-11 60.1
MS.gene68683.t1 AT5G42230 55.172 58 26 0 123 180 30 87 3.01e-12 64.3
MS.gene68683.t1 AT5G42230 35.238 105 62 3 10 109 201 304 9.76e-11 60.1
MS.gene68683.t1 AT5G23210 49.123 57 29 0 125 181 55 111 3.10e-12 64.3
MS.gene68683.t1 AT5G23210 49.123 57 29 0 125 181 55 111 3.65e-12 64.3
MS.gene68683.t1 AT3G56540 55.102 49 22 0 125 173 83 131 4.80e-12 63.2
MS.gene68683.t1 AT1G11080 52.632 57 27 0 125 181 54 110 8.18e-12 63.2
MS.gene68683.t1 AT1G11080 52.632 57 27 0 125 181 54 110 8.57e-12 63.2
MS.gene68683.t1 AT1G43780 50.794 63 31 0 118 180 34 96 8.74e-12 63.2
MS.gene68683.t1 AT1G43780 34.286 105 63 3 9 108 210 313 1.69e-11 62.4
MS.gene68683.t1 AT4G15100 51.724 58 28 0 124 181 47 104 1.35e-11 62.8
MS.gene68683.t1 AT3G02110 46.552 58 31 0 124 181 40 97 1.50e-11 62.4
MS.gene68683.t1 AT5G42240 53.448 58 27 0 123 180 34 91 1.78e-11 62.4
MS.gene68683.t1 AT3G63470 50.877 57 28 0 125 181 85 141 2.53e-11 62.0
MS.gene68683.t1 AT2G12480 50.000 56 28 0 125 180 35 90 7.84e-11 60.5
MS.gene68683.t1 AT2G12480 50.000 56 28 0 125 180 35 90 8.39e-11 60.5
MS.gene68683.t1 AT2G12480 50.000 56 28 0 125 180 35 90 8.70e-11 60.1
MS.gene68683.t1 AT2G12480 50.000 56 28 0 125 180 35 90 9.04e-11 60.1

Find 45 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTGGTCACATGGCCTTAT+AGG 0.173160 2.3:-39081392 MS.gene68683:CDS
TTGTTCCTGGCGTTTGAATA+TGG 0.252866 2.3:+39081337 None:intergenic
CGTGGTCACATGGCCTTATA+GGG 0.259428 2.3:-39081391 MS.gene68683:CDS
CTTCAGGTCAATGTTGGGTT+GGG 0.277459 2.3:+39081569 None:intergenic
GCAGATTGGGAATTCTCTTT+TGG 0.280950 2.3:-39081444 MS.gene68683:intron
TAATCTTTGATTTAGCATTC+TGG 0.283397 2.3:-39081019 MS.gene68683:intron
TATGGAGAAATTGCAACTTT+TGG 0.341716 2.3:+39081355 None:intergenic
TGATATTACCAATTTGTTCC+TGG 0.347066 2.3:+39081324 None:intergenic
TACCGGTCAAAATCTACTTT+TGG 0.356029 2.3:+39080505 None:intergenic
TTCAAACGCCAGGAACAAAT+TGG 0.362605 2.3:-39081332 MS.gene68683:CDS
GTATGCAAATTACATTACTA+TGG 0.372719 2.3:-39080485 MS.gene68683:CDS
GGAGCACCAAGGAGCGTTGC+TGG 0.387042 2.3:-39080248 MS.gene68683:CDS
TGAATGTGGAATCCCCTATA+AGG 0.396885 2.3:+39081378 None:intergenic
CACCTACCGCAATACCCTTC+AGG 0.404306 2.3:+39081553 None:intergenic
TGCAGATAGGCTGCATCATC+CGG 0.416393 2.3:-39081116 MS.gene68683:intron
TTCAGGTCAATGTTGGGTTG+GGG 0.428035 2.3:+39081570 None:intergenic
CCTTCAGGTCAATGTTGGGT+TGG 0.468324 2.3:+39081568 None:intergenic
TCCTTTATGAACAGACTAGC+AGG 0.475755 2.3:-39081189 MS.gene68683:intron
TTAGCATTCTGGAAAGAAGA+TGG 0.480459 2.3:-39081008 MS.gene68683:intron
TCAGGTCAATGTTGGGTTGG+GGG 0.484845 2.3:+39081571 None:intergenic
ATAGTAAACGTACGGACTAC+AGG 0.486293 2.3:+39080889 None:intergenic
TAGATTTCCTACATGCAGAT+AGG 0.491769 2.3:-39081129 MS.gene68683:CDS
ATACCCTTCAGGTCAATGTT+GGG 0.495008 2.3:+39081564 None:intergenic
TCATAACCAGCAACGCTCCT+TGG 0.495051 2.3:+39080242 None:intergenic
AATACCCTTCAGGTCAATGT+TGG 0.501841 2.3:+39081563 None:intergenic
ATAATCTTCAGAGACTAGTA+AGG 0.528473 2.3:-39080545 MS.gene68683:intron
CGATCCAGCTTCAAAACCAT+TGG 0.537499 2.3:-39080413 MS.gene68683:CDS
TTTCTCCATATTCAAACGCC+AGG 0.544582 2.3:-39081342 MS.gene68683:CDS
TAGTAATGTAATTTGCATAC+CGG 0.545218 2.3:+39080488 None:intergenic
CCATTCAACAAAAGCACCAA+TGG 0.551134 2.3:+39080397 None:intergenic
CCAACCCAACATTGACCTGA+AGG 0.580024 2.3:-39081568 MS.gene68683:CDS
GCTGAATATCCGTGGTCACA+TGG 0.587997 2.3:-39081401 MS.gene68683:CDS
CATTGACCTGAAGGGTATTG+CGG 0.592324 2.3:-39081559 MS.gene68683:intron
GTCATACACATCAGAGCAGA+TGG 0.608333 2.3:+39081298 None:intergenic
CACATCGGAGGTTACATCGA+AGG 0.628243 2.3:+39081156 None:intergenic
GATGCAGCCTATCTGCATGT+AGG 0.628727 2.3:+39081122 None:intergenic
GTGGTCACATGGCCTTATAG+GGG 0.629985 2.3:-39081390 MS.gene68683:CDS
CAACCCAACATTGACCTGAA+GGG 0.635797 2.3:-39081567 MS.gene68683:CDS
CCTATAAGGCCATGTGACCA+CGG 0.645994 2.3:+39081392 None:intergenic
TAGGAAATCTAGACACACAT+CGG 0.671427 2.3:+39081141 None:intergenic
ATTATAGAGCTGAATATCCG+TGG 0.679132 2.3:-39081409 MS.gene68683:CDS
ACGTTGTAGGGATCTCACAT+TGG 0.686503 2.3:-39080916 MS.gene68683:intron
GAAATCTAGACACACATCGG+AGG 0.703734 2.3:+39081144 None:intergenic
CCGTTGGCCTAGGAGCACCA+AGG 0.726967 2.3:-39080259 MS.gene68683:intron
GTATGACGAAGTCACAACAT+CGG 0.746373 2.3:-39081282 MS.gene68683:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTTATGTTATAAAAG+GGG - chr2.3:39080950-39080969 MS.gene68683:intron 10.0%
!! CAATTATTTATGTTATAAAA+GGG - chr2.3:39080949-39080968 MS.gene68683:intron 10.0%
!! TCAATTATTTATGTTATAAA+AGG - chr2.3:39080948-39080967 MS.gene68683:intron 10.0%
!! TATGCAAATGATAATATATT+CGG - chr2.3:39081455-39081474 MS.gene68683:intron 15.0%
!! ATAATTGAATAGTAAACGTA+CGG + chr2.3:39080936-39080955 None:intergenic 20.0%
!! ATTAGCATTAAATACAAAAC+TGG + chr2.3:39081141-39081160 None:intergenic 20.0%
!!! AATAGAAAAGTTTTCTATCT+TGG + chr2.3:39081362-39081381 None:intergenic 20.0%
!!! ACATTTTATATCCTTCAAAT+TGG + chr2.3:39081034-39081053 None:intergenic 20.0%
!!! TTCTAGATTTTTTTTTTCTC+TGG - chr2.3:39081007-39081026 MS.gene68683:CDS 20.0%
!!! TTTTTTTTTGGGATTTTGAA+GGG - chr2.3:39081519-39081538 MS.gene68683:intron 20.0%
!!! TTTTTTTTTTGGGATTTTGA+AGG - chr2.3:39081518-39081537 MS.gene68683:intron 20.0%
! AAATTACTGTTCTATTGAGA+TGG + chr2.3:39081077-39081096 None:intergenic 25.0%
! AATGAGTGTAAGTAACTATT+AGG + chr2.3:39081195-39081214 None:intergenic 25.0%
! ATATATGAACAGAAAACGAA+AGG + chr2.3:39080757-39080776 None:intergenic 25.0%
! GAATGCTAAATCAAAGATTA+AGG + chr2.3:39080795-39080814 None:intergenic 25.0%
! GTATGCAAATTACATTACTA+TGG - chr2.3:39081329-39081348 MS.gene68683:CDS 25.0%
! TATTTATGTTATAAAAGGGG+TGG - chr2.3:39080953-39080972 MS.gene68683:intron 25.0%
!! TAATCTTTGATTTAGCATTC+TGG - chr2.3:39080795-39080814 MS.gene68683:intron 25.0%
!! TAGTAATGTAATTTGCATAC+CGG + chr2.3:39081329-39081348 None:intergenic 25.0%
!! TATTCAAGTATTTTGCAATG+TGG + chr2.3:39080848-39080867 None:intergenic 25.0%
AATGCATCAAGTGTATATAC+CGG + chr2.3:39080720-39080739 None:intergenic 30.0%
ACTGGACAAAATGAACTAAA+CGG + chr2.3:39081123-39081142 None:intergenic 30.0%
ATAATCTTCAGAGACTAGTA+AGG - chr2.3:39081269-39081288 MS.gene68683:intron 30.0%
CTGTAACAGAAGAGAAATAT+TGG + chr2.3:39081165-39081184 None:intergenic 30.0%
TGTGTTTACAATTGCAGATT+GGG - chr2.3:39080357-39080376 MS.gene68683:intron 30.0%
! ACTTTTCTATTATTTCGTCG+AGG - chr2.3:39081371-39081390 MS.gene68683:CDS 30.0%
! TATGGAGAAATTGCAACTTT+TGG + chr2.3:39080462-39080481 None:intergenic 30.0%
! TGATATTACCAATTTGTTCC+TGG + chr2.3:39080493-39080512 None:intergenic 30.0%
!! TTCTCTTTTGGATTTTGACA+CGG - chr2.3:39080382-39080401 MS.gene68683:intron 30.0%
ATTATAGAGCTGAATATCCG+TGG - chr2.3:39080405-39080424 MS.gene68683:CDS 35.0%
CAATCTGCAATTGTAAACAC+AGG + chr2.3:39080358-39080377 None:intergenic 35.0%
CTGTGTTTACAATTGCAGAT+TGG - chr2.3:39080356-39080375 MS.gene68683:intron 35.0%
GCTAAATCAAAGATTAAGGC+AGG + chr2.3:39080791-39080810 None:intergenic 35.0%
TAGATTTCCTACATGCAGAT+AGG - chr2.3:39080685-39080704 MS.gene68683:intron 35.0%
TAGGAAATCTAGACACACAT+CGG + chr2.3:39080676-39080695 None:intergenic 35.0%
TATATTCGGATGTAAACCAC+TGG - chr2.3:39081469-39081488 MS.gene68683:intron 35.0%
TGGAGTTTAGAAGAATACTG+TGG - chr2.3:39080973-39080992 MS.gene68683:intron 35.0%
! ATTGCAACTTTTGGTGAATG+TGG + chr2.3:39080453-39080472 None:intergenic 35.0%
! TACCGGTCAAAATCTACTTT+TGG + chr2.3:39081312-39081331 None:intergenic 35.0%
! TTAGCATTCTGGAAAGAAGA+TGG - chr2.3:39080806-39080825 MS.gene68683:intron 35.0%
! TTTTCTCTGGTCCAATTTGA+AGG - chr2.3:39081020-39081039 MS.gene68683:intron 35.0%
!! AAATCTACTTTTGGCTGATC+AGG + chr2.3:39081303-39081322 None:intergenic 35.0%
!! AGCCAAAAGTAGATTTTGAC+CGG - chr2.3:39081307-39081326 MS.gene68683:CDS 35.0%
AATACCCTTCAGGTCAATGT+TGG + chr2.3:39080254-39080273 None:intergenic 40.0%
ATACCCTTCAGGTCAATGTT+GGG + chr2.3:39080253-39080272 None:intergenic 40.0%
CTCTTCACAACAACGTTGTA+GGG - chr2.3:39080886-39080905 MS.gene68683:intron 40.0%
GTATGACGAAGTCACAACAT+CGG - chr2.3:39080532-39080551 MS.gene68683:CDS 40.0%
TCCTTTATGAACAGACTAGC+AGG - chr2.3:39080625-39080644 MS.gene68683:intron 40.0%
TGAATGTGGAATCCCCTATA+AGG + chr2.3:39080439-39080458 None:intergenic 40.0%
TTCAAACGCCAGGAACAAAT+TGG - chr2.3:39080482-39080501 MS.gene68683:CDS 40.0%
TTGTTCCTGGCGTTTGAATA+TGG + chr2.3:39080480-39080499 None:intergenic 40.0%
TTTCTCCATATTCAAACGCC+AGG - chr2.3:39080472-39080491 MS.gene68683:CDS 40.0%
! ACCTGCTAGTCTGTTCATAA+AGG + chr2.3:39080629-39080648 None:intergenic 40.0%
! ATAGTAAACGTACGGACTAC+AGG + chr2.3:39080928-39080947 None:intergenic 40.0%
! GCAGATTGGGAATTCTCTTT+TGG - chr2.3:39080370-39080389 MS.gene68683:intron 40.0%
! GCTTTTGTTGAATGGAGGTA+AGG - chr2.3:39081425-39081444 MS.gene68683:CDS 40.0%
!! CCATTCAACAAAAGCACCAA+TGG + chr2.3:39081420-39081439 None:intergenic 40.0%
!! CCATTGGTGCTTTTGTTGAA+TGG - chr2.3:39081417-39081436 MS.gene68683:CDS 40.0%
!! TTGGTGCTTTTGTTGAATGG+AGG - chr2.3:39081420-39081439 MS.gene68683:CDS 40.0%
!!! CAATGGTTTTGAAGCTGGAT+CGG + chr2.3:39081403-39081422 None:intergenic 40.0%
!!! TTTTGGGATTTTGAAGGGCT+TGG - chr2.3:39081524-39081543 MS.gene68683:intron 40.0%
ACGTTGTAGGGATCTCACAT+TGG - chr2.3:39080898-39080917 MS.gene68683:intron 45.0%
CAACCCAACATTGACCTGAA+GGG - chr2.3:39080247-39080266 MS.gene68683:CDS 45.0%
CGATCCAGCTTCAAAACCAT+TGG - chr2.3:39081401-39081420 MS.gene68683:CDS 45.0%
CGTTGTTGTGAAGAGCTTTG+TGG + chr2.3:39080881-39080900 None:intergenic 45.0%
CTTCAGGTCAATGTTGGGTT+GGG + chr2.3:39080248-39080267 None:intergenic 45.0%
GAAATCTAGACACACATCGG+AGG + chr2.3:39080673-39080692 None:intergenic 45.0%
GCTCTTCACAACAACGTTGT+AGG - chr2.3:39080885-39080904 MS.gene68683:intron 45.0%
GTCATACACATCAGAGCAGA+TGG + chr2.3:39080519-39080538 None:intergenic 45.0%
! AGATCAGATCAAAGCACCAG+TGG + chr2.3:39081488-39081507 None:intergenic 45.0%
! TTCAGGTCAATGTTGGGTTG+GGG + chr2.3:39080247-39080266 None:intergenic 45.0%
!! CATTGACCTGAAGGGTATTG+CGG - chr2.3:39080255-39080274 MS.gene68683:intron 45.0%
!!! AGCACCAATGGTTTTGAAGC+TGG + chr2.3:39081408-39081427 None:intergenic 45.0%
!!! TACTTTTTTTTTTTTTTTTT+GGG - chr2.3:39081508-39081527 MS.gene68683:intron 5.0%
!!! TTACTTTTTTTTTTTTTTTT+TGG - chr2.3:39081507-39081526 MS.gene68683:intron 5.0%
CACATCGGAGGTTACATCGA+AGG + chr2.3:39080661-39080680 None:intergenic 50.0%
CCAACCCAACATTGACCTGA+AGG - chr2.3:39080246-39080265 MS.gene68683:CDS 50.0%
CCTATAAGGCCATGTGACCA+CGG + chr2.3:39080425-39080444 None:intergenic 50.0%
CCTTCAGGTCAATGTTGGGT+TGG + chr2.3:39080249-39080268 None:intergenic 50.0%
GACGAAGTCACAACATCGGT+TGG - chr2.3:39080536-39080555 MS.gene68683:CDS 50.0%
GATGCAGCCTATCTGCATGT+AGG + chr2.3:39080695-39080714 None:intergenic 50.0%
GCTGAATATCCGTGGTCACA+TGG - chr2.3:39080413-39080432 MS.gene68683:CDS 50.0%
TCATAACCAGCAACGCTCCT+TGG + chr2.3:39081575-39081594 None:intergenic 50.0%
TGCAGATAGGCTGCATCATC+CGG - chr2.3:39080698-39080717 MS.gene68683:intron 50.0%
!! CGTGGTCACATGGCCTTATA+GGG - chr2.3:39080423-39080442 MS.gene68683:CDS 50.0%
!! GTGGTCACATGGCCTTATAG+GGG - chr2.3:39080424-39080443 MS.gene68683:CDS 50.0%
!! TCAATGTTGGGTTGGGGGTA+AGG + chr2.3:39080241-39080260 None:intergenic 50.0%
!! TCAGGTCAATGTTGGGTTGG+GGG + chr2.3:39080246-39080265 None:intergenic 50.0%
CACCTACCGCAATACCCTTC+AGG + chr2.3:39080264-39080283 None:intergenic 55.0%
!! CCGTGGTCACATGGCCTTAT+AGG - chr2.3:39080422-39080441 MS.gene68683:CDS 55.0%
!! GACCTGAAGGGTATTGCGGT+AGG - chr2.3:39080259-39080278 MS.gene68683:intron 55.0%
! GGGCTTGGTTGCTCTTCCGT+TGG - chr2.3:39081539-39081558 MS.gene68683:intron 60.0%
! GGTTGCTCTTCCGTTGGCCT+AGG - chr2.3:39081545-39081564 MS.gene68683:intron 60.0%
!! CAACGCTCCTTGGTGCTCCT+AGG + chr2.3:39081565-39081584 None:intergenic 60.0%
!! CCTTGGTGCTCCTAGGCCAA+CGG + chr2.3:39081558-39081577 None:intergenic 60.0%
!! CCGTTGGCCTAGGAGCACCA+AGG - chr2.3:39081555-39081574 MS.gene68683:intron 65.0%
!! GGAGCACCAAGGAGCGTTGC+TGG - chr2.3:39081566-39081585 MS.gene68683:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 39080232 39081604 39080232 ID=MS.gene68683
chr2.3 mRNA 39080232 39081604 39080232 ID=MS.gene68683.t1;Parent=MS.gene68683
chr2.3 exon 39081560 39081604 39081560 ID=MS.gene68683.t1.exon1;Parent=MS.gene68683.t1
chr2.3 CDS 39081560 39081604 39081560 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39081283 39081462 39081283 ID=MS.gene68683.t1.exon2;Parent=MS.gene68683.t1
chr2.3 CDS 39081283 39081462 39081283 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39081117 39081197 39081117 ID=MS.gene68683.t1.exon3;Parent=MS.gene68683.t1
chr2.3 CDS 39081117 39081197 39081117 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39081006 39081026 39081006 ID=MS.gene68683.t1.exon4;Parent=MS.gene68683.t1
chr2.3 CDS 39081006 39081026 39081006 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39080902 39080929 39080902 ID=MS.gene68683.t1.exon5;Parent=MS.gene68683.t1
chr2.3 CDS 39080902 39080929 39080902 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39080395 39080556 39080395 ID=MS.gene68683.t1.exon6;Parent=MS.gene68683.t1
chr2.3 CDS 39080395 39080556 39080395 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
chr2.3 exon 39080232 39080269 39080232 ID=MS.gene68683.t1.exon7;Parent=MS.gene68683.t1
chr2.3 CDS 39080232 39080269 39080232 ID=cds.MS.gene68683.t1;Parent=MS.gene68683.t1
Gene Sequence

>MS.gene68683

ATGCTACCTTACCCCCAACCCAACATTGACCTGAAGGGTATTGCGGTAGGTGCACACATGAGTATTTTCTAATTATTATAGACTAAAAAATATGAATGTTTTATAATATTGATAATGTTGATTCCTGTGTTTACAATTGCAGATTGGGAATTCTCTTTTGGATTTTGACACGGATTATAGAGCTGAATATCCGTGGTCACATGGCCTTATAGGGGATTCCACATTCACCAAAAGTTGCAATTTCTCCATATTCAAACGCCAGGAACAAATTGGTAATATCAGTACCATCTGCTCTGATGTGTATGACGAAGTCACAACATCGGTTGGTAGATATATAATATTTCTAAATTTCTTCTCTTGAAATTAGAAGCTCAAACTCTAACATAAGCTTTATCCTTTATGAACAGACTAGCAGGTTCATTGATACCTTCGATGTAACCTCCGATGTGTGTCTAGATTTCCTACATGCAGATAGGCTGCATCATCCGGTATATACACTTGATGCATTTTTTTTTTATTCTTCCTTTCGTTTTCTGTTCATATATATTCTTATGCGCCTGCCTTAATCTTTGATTTAGCATTCTGGAAAGAAGATGGAAGTTTGTCTAGAAGACCACATTGCAAAATACTTGAATAGATAAGATGTCCACAAAGCTCTTCACAACAACGTTGTAGGGATCTCACATTGGTCGACCTGTAGTCCGTACGTTTACTATTCAATTATTTATGTTATAAAAGGGGTGGAGTTTAGAAGAATACTGTGGTTCAATTTCATTTCTAGATTTTTTTTTTCTCTGGTCCAATTTGAAGGATATAAAATGTAGCAACAAATTTTGTTTGTTCCATCTCAATAGAACAGTAATTTCATTCTAGTTGATTTTATTTCATCCGTTTAGTTCATTTTGTCCAGTTTTGTATTTAATGCTAATACCAATATTTCTCTTCTGTTACAGTGTTCTGCCTAATAGTTACTTACACTCATTGTTAGCTTAAGCTTATCTCTGTCATTTTTGTCACTAATTTTTGCTTTTATGTTAATAATCTTCAGAGACTAGTAAGGTAACTTTACCTGATCAGCCAAAAGTAGATTTTGACCGGTATGCAAATTACATTACTATGGATGAAATCCAAGATAGAAAACTTTTCTATTATTTCGTCGAGGCAAAGACCGATCCAGCTTCAAAACCATTGGTGCTTTTGTTGAATGGAGGTAAGGATTTTATTATGCAAATGATAATATATTCGGATGTAAACCACTGGTGCTTTGATCTGATCTTACTTTTTTTTTTTTTTTTTGGGATTTTGAAGGGCTTGGTTGCTCTTCCGTTGGCCTAGGAGCACCAAGGAGCGTTGCTGGTTATGATGATCATTAA
Protein sequence

>MS.gene68683.t1

MLPYPQPNIDLKGIAIGNSLLDFDTDYRAEYPWSHGLIGDSTFTKSCNFSIFKRQEQIGNISTICSDVYDEVTTSTSRFIDTFDVTSDVCLDFLHADRLHHPHSGKKMEGSHIGRPVVQTSKVTLPDQPKVDFDRYANYITMDEIQDRKLFYYFVEAKTDPASKPLVLLLNGGAPRSVAGYDDH