Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68917.t1 | XP_003605063.1 | 98.6 | 219 | 3 | 0 | 23 | 241 | 80 | 298 | 5.50E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68917.t1 | Q8GWW8 | 55.4 | 222 | 92 | 1 | 27 | 241 | 92 | 313 | 1.4e-64 | 247.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68917.t1 | G7JDD2 | 98.6 | 219 | 3 | 0 | 23 | 241 | 80 | 298 | 3.9e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052176 | MS.gene68917 | 0.815821 | 7.59E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene68917 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene68917 | 0.828734 | 7.63E-55 | -1.69E-46 |
| MS.gene059317 | MS.gene68917 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene68917 | 0.815018 | 1.15E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene68917 | 0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene68917 | -0.805697 | 1.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68917.t1 | MTR_4g023470 | 95.197 | 229 | 11 | 0 | 23 | 251 | 80 | 308 | 8.71e-161 | 453 |
| MS.gene68917.t1 | MTR_4g023490 | 66.250 | 240 | 69 | 3 | 15 | 250 | 2 | 233 | 2.86e-102 | 302 |
| MS.gene68917.t1 | MTR_3g027580 | 64.192 | 229 | 80 | 1 | 23 | 251 | 83 | 309 | 2.98e-101 | 302 |
| MS.gene68917.t1 | MTR_5g065160 | 39.732 | 224 | 116 | 4 | 23 | 236 | 77 | 291 | 1.45e-48 | 167 |
| MS.gene68917.t1 | MTR_5g065160 | 39.732 | 224 | 116 | 4 | 23 | 236 | 70 | 284 | 1.48e-48 | 166 |
| MS.gene68917.t1 | MTR_5g065160 | 39.732 | 224 | 116 | 4 | 23 | 236 | 77 | 291 | 1.53e-48 | 166 |
| MS.gene68917.t1 | MTR_5g065160 | 39.732 | 224 | 116 | 4 | 23 | 236 | 76 | 290 | 1.87e-48 | 166 |
| MS.gene68917.t1 | MTR_3g087030 | 41.096 | 219 | 120 | 4 | 30 | 241 | 83 | 299 | 7.22e-39 | 140 |
| MS.gene68917.t1 | MTR_2g104030 | 35.510 | 245 | 124 | 6 | 30 | 250 | 71 | 305 | 2.52e-35 | 132 |
| MS.gene68917.t1 | MTR_8g006430 | 39.827 | 231 | 106 | 9 | 30 | 241 | 15 | 231 | 1.20e-34 | 129 |
| MS.gene68917.t1 | MTR_2g087660 | 39.367 | 221 | 120 | 6 | 30 | 241 | 14 | 229 | 1.24e-24 | 100 |
| MS.gene68917.t1 | MTR_2g087660 | 39.367 | 221 | 120 | 6 | 30 | 241 | 14 | 229 | 2.36e-24 | 100 |
| MS.gene68917.t1 | MTR_6g471050 | 31.401 | 207 | 110 | 5 | 57 | 241 | 9 | 205 | 2.06e-22 | 95.5 |
| MS.gene68917.t1 | MTR_4g050420 | 38.938 | 226 | 122 | 7 | 25 | 241 | 9 | 227 | 8.85e-22 | 93.6 |
| MS.gene68917.t1 | MTR_1g110310 | 28.099 | 242 | 130 | 4 | 23 | 224 | 10 | 247 | 1.87e-19 | 87.0 |
| MS.gene68917.t1 | MTR_7g109340 | 33.168 | 202 | 100 | 5 | 22 | 199 | 19 | 209 | 2.61e-18 | 83.2 |
| MS.gene68917.t1 | MTR_3g108020 | 40.196 | 102 | 55 | 2 | 30 | 130 | 5 | 101 | 7.35e-17 | 79.0 |
| MS.gene68917.t1 | MTR_5g004570 | 41.509 | 106 | 49 | 3 | 30 | 132 | 7 | 102 | 3.89e-16 | 75.9 |
| MS.gene68917.t1 | MTR_5g035770 | 50.000 | 72 | 36 | 0 | 26 | 97 | 22 | 93 | 4.33e-16 | 77.4 |
| MS.gene68917.t1 | MTR_2g090705 | 38.596 | 114 | 58 | 3 | 29 | 130 | 4 | 117 | 4.40e-16 | 77.0 |
| MS.gene68917.t1 | MTR_8g037810 | 56.061 | 66 | 29 | 0 | 29 | 94 | 6 | 71 | 5.01e-16 | 76.6 |
| MS.gene68917.t1 | MTR_2g014470 | 41.071 | 112 | 50 | 3 | 30 | 130 | 5 | 111 | 1.01e-15 | 75.9 |
| MS.gene68917.t1 | MTR_4g078850 | 39.316 | 117 | 50 | 3 | 30 | 130 | 5 | 116 | 1.75e-15 | 75.1 |
| MS.gene68917.t1 | MTR_1g029470 | 54.545 | 66 | 30 | 0 | 29 | 94 | 6 | 71 | 2.57e-15 | 75.1 |
| MS.gene68917.t1 | MTR_7g092380 | 55.224 | 67 | 30 | 0 | 28 | 94 | 21 | 87 | 7.02e-15 | 72.8 |
| MS.gene68917.t1 | MTR_1g029460 | 53.846 | 65 | 30 | 0 | 30 | 94 | 7 | 71 | 9.15e-15 | 73.6 |
| MS.gene68917.t1 | MTR_7g101070 | 52.778 | 72 | 33 | 1 | 22 | 92 | 351 | 422 | 1.10e-14 | 73.6 |
| MS.gene68917.t1 | MTR_1g105540 | 57.377 | 61 | 25 | 1 | 31 | 91 | 37 | 96 | 2.88e-14 | 71.2 |
| MS.gene68917.t1 | MTR_2g014480 | 40.708 | 113 | 50 | 4 | 30 | 130 | 5 | 112 | 4.11e-14 | 71.2 |
| MS.gene68917.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 1 | 30 | 91 | 17 | 82 | 3.24e-13 | 65.1 |
| MS.gene68917.t1 | MTR_1g052110 | 53.030 | 66 | 31 | 0 | 29 | 94 | 38 | 103 | 4.42e-13 | 67.8 |
| MS.gene68917.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 1 | 30 | 91 | 17 | 82 | 7.76e-13 | 65.1 |
| MS.gene68917.t1 | MTR_4g015840 | 37.168 | 113 | 54 | 3 | 30 | 130 | 5 | 112 | 8.20e-13 | 67.4 |
| MS.gene68917.t1 | MTR_2g436560 | 39.604 | 101 | 57 | 2 | 30 | 130 | 105 | 201 | 4.45e-12 | 65.5 |
| MS.gene68917.t1 | MTR_5g065860 | 43.284 | 67 | 38 | 0 | 25 | 91 | 44 | 110 | 7.56e-12 | 62.0 |
| MS.gene68917.t1 | MTR_2g097690 | 47.143 | 70 | 36 | 1 | 22 | 91 | 68 | 136 | 7.71e-12 | 63.2 |
| MS.gene68917.t1 | MTR_2g097690 | 47.143 | 70 | 36 | 1 | 22 | 91 | 68 | 136 | 4.90e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68917.t1 | AT5G48030 | 57.399 | 223 | 86 | 2 | 27 | 241 | 92 | 313 | 2.53e-83 | 256 |
| MS.gene68917.t1 | AT1G28210 | 41.518 | 224 | 113 | 5 | 25 | 241 | 44 | 256 | 6.43e-51 | 171 |
| MS.gene68917.t1 | AT1G28210 | 41.518 | 224 | 113 | 5 | 25 | 241 | 44 | 256 | 9.91e-51 | 171 |
| MS.gene68917.t1 | AT1G28210 | 41.518 | 224 | 113 | 5 | 25 | 241 | 44 | 256 | 1.11e-50 | 171 |
| MS.gene68917.t1 | AT2G22360 | 40.175 | 229 | 107 | 8 | 30 | 241 | 87 | 302 | 1.65e-38 | 139 |
| MS.gene68917.t1 | AT1G80030 | 36.327 | 245 | 122 | 6 | 30 | 250 | 76 | 310 | 1.59e-37 | 138 |
| MS.gene68917.t1 | AT1G80030 | 36.327 | 245 | 122 | 6 | 30 | 250 | 76 | 310 | 1.59e-37 | 138 |
| MS.gene68917.t1 | AT1G80030 | 36.327 | 245 | 122 | 6 | 30 | 250 | 76 | 310 | 1.59e-37 | 138 |
| MS.gene68917.t1 | AT1G80030 | 36.327 | 245 | 122 | 6 | 30 | 250 | 76 | 310 | 1.78e-37 | 137 |
| MS.gene68917.t1 | AT4G39960 | 36.992 | 246 | 118 | 7 | 30 | 251 | 86 | 318 | 2.05e-36 | 134 |
| MS.gene68917.t1 | AT4G39960 | 36.992 | 246 | 118 | 7 | 30 | 251 | 86 | 318 | 2.05e-36 | 134 |
| MS.gene68917.t1 | AT3G17830 | 30.769 | 247 | 137 | 5 | 30 | 251 | 64 | 301 | 2.60e-29 | 115 |
| MS.gene68917.t1 | AT5G22060 | 38.009 | 221 | 123 | 7 | 30 | 241 | 15 | 230 | 4.95e-24 | 100 |
| MS.gene68917.t1 | AT3G44110 | 37.273 | 220 | 125 | 7 | 30 | 241 | 15 | 229 | 5.79e-22 | 93.6 |
| MS.gene68917.t1 | AT3G44110 | 37.273 | 220 | 125 | 7 | 30 | 241 | 15 | 229 | 7.52e-22 | 94.0 |
| MS.gene68917.t1 | AT5G25530 | 44.340 | 106 | 49 | 3 | 30 | 130 | 5 | 105 | 7.53e-20 | 87.4 |
| MS.gene68917.t1 | AT1G68370 | 27.426 | 237 | 128 | 4 | 28 | 224 | 16 | 248 | 2.00e-17 | 81.3 |
| MS.gene68917.t1 | AT5G25530 | 41.228 | 114 | 49 | 4 | 30 | 130 | 5 | 113 | 3.24e-17 | 80.1 |
| MS.gene68917.t1 | AT3G62600 | 37.086 | 151 | 81 | 3 | 28 | 170 | 25 | 169 | 3.84e-17 | 80.1 |
| MS.gene68917.t1 | AT4G39150 | 56.716 | 67 | 29 | 0 | 30 | 96 | 7 | 73 | 1.35e-16 | 78.6 |
| MS.gene68917.t1 | AT4G39150 | 56.716 | 67 | 29 | 0 | 30 | 96 | 7 | 73 | 1.35e-16 | 78.6 |
| MS.gene68917.t1 | AT4G39150 | 56.716 | 67 | 29 | 0 | 30 | 96 | 7 | 73 | 1.35e-16 | 78.6 |
| MS.gene68917.t1 | AT5G06910 | 56.061 | 66 | 29 | 0 | 29 | 94 | 29 | 94 | 3.73e-16 | 76.6 |
| MS.gene68917.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 30 | 117 | 7 | 98 | 4.24e-16 | 77.0 |
| MS.gene68917.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 30 | 117 | 7 | 98 | 4.24e-16 | 77.0 |
| MS.gene68917.t1 | AT2G21510 | 46.809 | 94 | 44 | 2 | 29 | 117 | 6 | 98 | 4.37e-16 | 77.0 |
| MS.gene68917.t1 | AT1G59980 | 36.296 | 135 | 70 | 4 | 28 | 158 | 22 | 144 | 4.98e-16 | 77.0 |
| MS.gene68917.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 30 | 117 | 7 | 98 | 5.14e-16 | 77.0 |
| MS.gene68917.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 30 | 117 | 7 | 98 | 5.14e-16 | 77.0 |
| MS.gene68917.t1 | AT1G59980 | 50.000 | 70 | 35 | 0 | 28 | 97 | 22 | 91 | 9.18e-16 | 76.6 |
| MS.gene68917.t1 | AT1G76700 | 56.923 | 65 | 28 | 0 | 30 | 94 | 7 | 71 | 1.42e-15 | 75.9 |
| MS.gene68917.t1 | AT1G24120 | 48.611 | 72 | 37 | 0 | 26 | 97 | 17 | 88 | 6.15e-15 | 74.3 |
| MS.gene68917.t1 | AT3G12170 | 51.429 | 70 | 34 | 0 | 25 | 94 | 7 | 76 | 6.31e-15 | 72.8 |
| MS.gene68917.t1 | AT1G77020 | 53.846 | 65 | 30 | 0 | 30 | 94 | 7 | 71 | 6.32e-15 | 73.9 |
| MS.gene68917.t1 | AT3G12170 | 51.429 | 70 | 34 | 0 | 25 | 94 | 43 | 112 | 6.40e-15 | 73.2 |
| MS.gene68917.t1 | AT1G71000 | 44.286 | 70 | 35 | 1 | 26 | 91 | 5 | 74 | 7.55e-15 | 70.5 |
| MS.gene68917.t1 | AT1G21080 | 53.846 | 65 | 30 | 0 | 30 | 94 | 7 | 71 | 1.01e-14 | 73.6 |
| MS.gene68917.t1 | AT1G21080 | 53.846 | 65 | 30 | 0 | 30 | 94 | 7 | 71 | 1.02e-14 | 73.6 |
| MS.gene68917.t1 | AT2G20560 | 40.367 | 109 | 57 | 3 | 30 | 130 | 5 | 113 | 1.41e-14 | 72.8 |
| MS.gene68917.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 30 | 130 | 5 | 111 | 1.60e-14 | 71.2 |
| MS.gene68917.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 30 | 130 | 5 | 111 | 3.15e-14 | 70.5 |
| MS.gene68917.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 30 | 130 | 5 | 111 | 3.39e-14 | 70.9 |
| MS.gene68917.t1 | AT1G71000 | 44.286 | 70 | 35 | 1 | 26 | 91 | 5 | 74 | 4.24e-14 | 68.6 |
| MS.gene68917.t1 | AT1G56300 | 49.254 | 67 | 30 | 1 | 29 | 91 | 13 | 79 | 4.58e-14 | 67.4 |
| MS.gene68917.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 30 | 130 | 5 | 111 | 5.38e-14 | 70.9 |
| MS.gene68917.t1 | AT1G56300 | 45.833 | 72 | 35 | 1 | 24 | 91 | 8 | 79 | 8.89e-14 | 67.4 |
| MS.gene68917.t1 | AT1G59725 | 36.522 | 115 | 56 | 3 | 30 | 130 | 5 | 116 | 1.75e-13 | 69.3 |
| MS.gene68917.t1 | AT1G10350 | 35.652 | 115 | 57 | 3 | 30 | 130 | 5 | 116 | 2.66e-13 | 68.9 |
| MS.gene68917.t1 | AT3G08970 | 47.561 | 82 | 36 | 2 | 31 | 112 | 29 | 103 | 3.56e-13 | 69.3 |
| MS.gene68917.t1 | AT3G08970 | 47.561 | 82 | 36 | 2 | 31 | 112 | 29 | 103 | 3.56e-13 | 69.3 |
| MS.gene68917.t1 | AT3G08910 | 42.453 | 106 | 55 | 3 | 30 | 130 | 5 | 109 | 3.95e-13 | 68.6 |
| MS.gene68917.t1 | AT5G03160 | 47.368 | 95 | 44 | 3 | 22 | 115 | 363 | 452 | 4.46e-13 | 68.9 |
| MS.gene68917.t1 | AT1G61770 | 50.820 | 61 | 29 | 1 | 31 | 91 | 36 | 95 | 1.39e-12 | 66.6 |
| MS.gene68917.t1 | AT4G28480 | 38.532 | 109 | 57 | 3 | 29 | 127 | 4 | 112 | 1.57e-12 | 66.6 |
| MS.gene68917.t1 | AT4G28480 | 38.532 | 109 | 57 | 3 | 29 | 127 | 4 | 112 | 1.58e-12 | 66.2 |
| MS.gene68917.t1 | AT5G49060 | 49.231 | 65 | 32 | 1 | 30 | 94 | 100 | 163 | 9.87e-12 | 64.3 |
| MS.gene68917.t1 | AT5G49060 | 49.231 | 65 | 32 | 1 | 30 | 94 | 100 | 163 | 9.87e-12 | 64.3 |
| MS.gene68917.t1 | AT5G05750 | 34.545 | 110 | 68 | 2 | 28 | 137 | 113 | 218 | 2.69e-11 | 62.8 |
| MS.gene68917.t1 | AT5G16650 | 45.714 | 70 | 38 | 0 | 25 | 94 | 7 | 76 | 3.18e-11 | 60.8 |
| MS.gene68917.t1 | AT5G16650 | 45.714 | 70 | 38 | 0 | 25 | 94 | 7 | 76 | 7.03e-11 | 58.9 |
| MS.gene68917.t1 | AT5G18140 | 43.939 | 66 | 36 | 1 | 28 | 93 | 76 | 140 | 8.03e-11 | 61.6 |
Find 55 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATCGCTTACAAGTTTC+AGG | 0.178751 | 4.3:+74841130 | None:intergenic |
| AACGATGCTGCGAGATAGTT+TGG | 0.273726 | 4.3:+74844465 | None:intergenic |
| GAAATAAAGAAAGCTTACTA+TGG | 0.322849 | 4.3:-74844390 | MS.gene68917:CDS |
| CTTTGTTCCTTTGACAACTT+TGG | 0.344548 | 4.3:+74840625 | None:intergenic |
| ATAGTAAGCTTTCTTTATTT+CGG | 0.347885 | 4.3:+74844392 | None:intergenic |
| GTCCAGATGTTTGTACAAAC+TGG | 0.376510 | 4.3:-74841018 | MS.gene68917:intron |
| GGATCATCTTTATTTGCGTC+TGG | 0.383886 | 4.3:+74843109 | None:intergenic |
| AGGAGCTATTACGATGTTCT+TGG | 0.393663 | 4.3:-74844438 | MS.gene68917:CDS |
| AACAACCAAAGTGGTGGTTT+CGG | 0.424450 | 4.3:-74842269 | MS.gene68917:CDS |
| CTTTGACAACTTTGGCACCT+TGG | 0.428176 | 4.3:+74840633 | None:intergenic |
| TGTTTGAAATGACAAAGTTT+TGG | 0.428748 | 4.3:+74841329 | None:intergenic |
| TGTGCTACATGCAAGGGAAC+TGG | 0.431002 | 4.3:-74840973 | MS.gene68917:CDS |
| AGAAGTTACATTGGCATATG+AGG | 0.434595 | 4.3:-74843065 | MS.gene68917:intron |
| TTCTAGATCAATTCATGGCT+CGG | 0.443208 | 4.3:-74844770 | None:intergenic |
| CGATGTTCTTGGTGTGAGTA+AGG | 0.456412 | 4.3:-74844427 | MS.gene68917:CDS |
| GGTGGGAGTGGTCTTCCTCC+TGG | 0.467186 | 4.3:-74841160 | MS.gene68917:CDS |
| ACGATGCTGCGAGATAGTTT+GGG | 0.490625 | 4.3:+74844466 | None:intergenic |
| CATCTTTATTTGCGTCTGGA+TGG | 0.490868 | 4.3:+74843113 | None:intergenic |
| AAATAAAGAAAGCTTACTAT+GGG | 0.491279 | 4.3:-74844389 | MS.gene68917:CDS |
| TGCCTCCGAAACCACCACTT+TGG | 0.495412 | 4.3:+74842264 | None:intergenic |
| TGTAAGCGATGCAAAGGGTC+AGG | 0.507844 | 4.3:-74841121 | MS.gene68917:CDS |
| GAAGTTTCAAGAAGTTACAT+TGG | 0.513562 | 4.3:-74843074 | MS.gene68917:CDS |
| CCACGGAACATCTGCTCGAA+AGG | 0.515788 | 4.3:+74842227 | None:intergenic |
| CGAACTATTTCAGGTGGGAG+TGG | 0.521446 | 4.3:-74841172 | MS.gene68917:intron |
| ACCACTTTGGTTGTTTACAT+AGG | 0.523371 | 4.3:+74842277 | None:intergenic |
| TCTAGATCAATTCATGGCTC+GGG | 0.526862 | 4.3:-74844769 | None:intergenic |
| GTCAAGTTGCATACTTATCC+TGG | 0.529199 | 4.3:-74840599 | MS.gene68917:CDS |
| TGTGGTTGAACTATCTTTCA+CGG | 0.532096 | 4.3:-74841370 | MS.gene68917:CDS |
| AGTGGTGGTTTCGGAGGCAA+TGG | 0.540722 | 4.3:-74842260 | MS.gene68917:CDS |
| AAAACGTCAACAGTATGATC+AGG | 0.540871 | 4.3:-74842914 | MS.gene68917:intron |
| ATCTCGCAGCATCGTTGGCA+AGG | 0.550201 | 4.3:-74844458 | MS.gene68917:CDS |
| AAACTATCTCGCAGCATCGT+TGG | 0.550950 | 4.3:-74844463 | MS.gene68917:CDS |
| AAGTACTTGTGCTACATGCA+AGG | 0.554627 | 4.3:-74840980 | MS.gene68917:CDS |
| GAAACTTGTAAGCGATGCAA+AGG | 0.557844 | 4.3:-74841127 | MS.gene68917:CDS |
| ACAAACTGGAATATTCAGAA+TGG | 0.567594 | 4.3:-74841004 | MS.gene68917:CDS |
| AATTCGAAATAATAATTACC+AGG | 0.569718 | 4.3:+74840581 | None:intergenic |
| GGTGGTTTCGGAGGCAATGG+TGG | 0.571135 | 4.3:-74842257 | MS.gene68917:CDS |
| TCTTTCACGGAAGCTATCCA+AGG | 0.575784 | 4.3:-74841357 | MS.gene68917:CDS |
| CAAGGTGCCAAAGTTGTCAA+AGG | 0.589611 | 4.3:-74840632 | MS.gene68917:CDS |
| ATTTGGCGGAGAAGATGTCA+AGG | 0.593689 | 4.3:-74841482 | MS.gene68917:intron |
| TACATTACAAGTTACAACAA+TGG | 0.594910 | 4.3:+74840549 | None:intergenic |
| AGTTTCTGCAAGTCTTGCCA+AGG | 0.595904 | 4.3:-74840650 | MS.gene68917:CDS |
| AACCAAAGTGGTGGTTTCGG+AGG | 0.598376 | 4.3:-74842266 | MS.gene68917:CDS |
| AAACTTGTAAGCGATGCAAA+GGG | 0.601982 | 4.3:-74841126 | MS.gene68917:CDS |
| CCTTTCGAGCAGATGTTCCG+TGG | 0.604194 | 4.3:-74842227 | MS.gene68917:CDS |
| CGCAAATAAAGATGATCCTG+AGG | 0.611520 | 4.3:-74843104 | MS.gene68917:CDS |
| AGTACTTGTGCTACATGCAA+GGG | 0.618060 | 4.3:-74840979 | MS.gene68917:CDS |
| CTTTCACGGAAGCTATCCAA+GGG | 0.653887 | 4.3:-74841356 | MS.gene68917:CDS |
| TTCGAGCAGATGTTCCGTGG+TGG | 0.661342 | 4.3:-74842224 | MS.gene68917:CDS |
| TATGTAAACAACCAAAGTGG+TGG | 0.673516 | 4.3:-74842275 | MS.gene68917:CDS |
| GCGATGCAAAGGGTCAGGAG+TGG | 0.682796 | 4.3:-74841116 | MS.gene68917:intron |
| AAGTCATTACATGGCCACCA+CGG | 0.693473 | 4.3:+74842210 | None:intergenic |
| AATAAAGAAAGCTTACTATG+GGG | 0.700800 | 4.3:-74844388 | MS.gene68917:intron |
| GACGTGCTTTGTAATGCTTG+TGG | 0.721251 | 4.3:-74841306 | MS.gene68917:intron |
| GCCTATGTAAACAACCAAAG+TGG | 0.723719 | 4.3:-74842278 | MS.gene68917:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATTAGATTCATATT+TGG | + | chr4.3:74843753-74843772 | None:intergenic | 10.0% |
| !! | ATAATATTAGATTCATATTT+GGG | + | chr4.3:74843752-74843771 | None:intergenic | 10.0% |
| !! | ATATTGAATTAAAAATATGA+TGG | + | chr4.3:74843357-74843376 | None:intergenic | 10.0% |
| !! | ATTTATACCTATATATAAAA+GGG | + | chr4.3:74841770-74841789 | None:intergenic | 10.0% |
| !! | GAATTTATTTACAAAATTAA+GGG | + | chr4.3:74844514-74844533 | None:intergenic | 10.0% |
| !! | TGAATTTATTTACAAAATTA+AGG | + | chr4.3:74844515-74844534 | None:intergenic | 10.0% |
| !!! | TTTGATTTAGAATTTAAATT+AGG | - | chr4.3:74841386-74841405 | MS.gene68917:intron | 10.0% |
| !! | AAAGTAACTTAGTAAATTAT+AGG | - | chr4.3:74841070-74841089 | MS.gene68917:intron | 15.0% |
| !! | ATTGTATAACATAGTATTTA+TGG | + | chr4.3:74841961-74841980 | None:intergenic | 15.0% |
| !! | CATTTATACCTATATATAAA+AGG | + | chr4.3:74841771-74841790 | None:intergenic | 15.0% |
| !! | GATCATAAAGATTATTAATA+TGG | + | chr4.3:74843913-74843932 | None:intergenic | 15.0% |
| !! | TATTTAACTCTTAAAAATCA+TGG | + | chr4.3:74843575-74843594 | None:intergenic | 15.0% |
| !! | TTTGATTCAAAATTGAAATT+AGG | - | chr4.3:74841420-74841439 | MS.gene68917:intron | 15.0% |
| !!! | ATTTTCATTTTAATGTTTGT+AGG | - | chr4.3:74842356-74842375 | MS.gene68917:intron | 15.0% |
| !!! | TACTAAGTTACTTTATTTTT+AGG | + | chr4.3:74841064-74841083 | None:intergenic | 15.0% |
| !! | AAAGTGAAATATGACTATAT+GGG | - | chr4.3:74844596-74844615 | MS.gene68917:intron | 20.0% |
| !! | AAATAAAGAAAGCTTACTAT+GGG | - | chr4.3:74840920-74840939 | MS.gene68917:intron | 20.0% |
| !! | AACAAAGTTTCAAAGAAAAT+AGG | + | chr4.3:74842436-74842455 | None:intergenic | 20.0% |
| !! | AATTCGAAATAATAATTACC+AGG | + | chr4.3:74844731-74844750 | None:intergenic | 20.0% |
| !! | ATTCTAATGAATGAAAAAAG+TGG | - | chr4.3:74842532-74842551 | MS.gene68917:intron | 20.0% |
| !! | CATATAGAAGAAAATCAATA+TGG | + | chr4.3:74844404-74844423 | None:intergenic | 20.0% |
| !! | TAAAGTAAATCAAATGAAAG+AGG | + | chr4.3:74842980-74842999 | None:intergenic | 20.0% |
| !! | TAAAGTGAAATATGACTATA+TGG | - | chr4.3:74844595-74844614 | MS.gene68917:intron | 20.0% |
| !! | TGAATCTATGTATTGAAATA+TGG | - | chr4.3:74840974-74840993 | MS.gene68917:CDS | 20.0% |
| !!! | AATAGTATGATTTAAGTTGT+TGG | - | chr4.3:74842587-74842606 | MS.gene68917:intron | 20.0% |
| !!! | ATAGTAAGCTTTCTTTATTT+CGG | + | chr4.3:74840920-74840939 | None:intergenic | 20.0% |
| !!! | GATTAGTTTAGATTAATTCT+AGG | - | chr4.3:74841352-74841371 | MS.gene68917:CDS | 20.0% |
| !!! | TTAATTTTTCATGAATGTGT+AGG | - | chr4.3:74842997-74843016 | MS.gene68917:intron | 20.0% |
| !!! | TTTTGAATAAAAATTGAGCA+AGG | - | chr4.3:74841330-74841349 | MS.gene68917:CDS | 20.0% |
| ! | AACTCTTAAAAATCATGGTT+GGG | + | chr4.3:74843570-74843589 | None:intergenic | 25.0% |
| ! | AAGAAGAAAACTTCAATACT+AGG | - | chr4.3:74842758-74842777 | MS.gene68917:intron | 25.0% |
| ! | AATAAAGAAAGCTTACTATG+GGG | - | chr4.3:74840921-74840940 | MS.gene68917:intron | 25.0% |
| ! | AATGTGAAGTTTAATGCATA+TGG | - | chr4.3:74842560-74842579 | MS.gene68917:intron | 25.0% |
| ! | ACATTATTAAGCATATGCTA+AGG | - | chr4.3:74843871-74843890 | MS.gene68917:intron | 25.0% |
| ! | ACTTGATAGAAAAAGAAAGA+CGG | - | chr4.3:74842646-74842665 | MS.gene68917:intron | 25.0% |
| ! | AGTAGCTCAAAATAAATTTC+CGG | + | chr4.3:74842629-74842648 | None:intergenic | 25.0% |
| ! | CATGTATATTGACAATTATG+AGG | + | chr4.3:74840956-74840975 | None:intergenic | 25.0% |
| ! | CATTATTAAGCATATGCTAA+GGG | - | chr4.3:74843872-74843891 | MS.gene68917:intron | 25.0% |
| ! | GAAATAAAGAAAGCTTACTA+TGG | - | chr4.3:74840919-74840938 | MS.gene68917:intron | 25.0% |
| ! | GAGCAATAATAAAAAAAGTC+AGG | + | chr4.3:74840598-74840617 | None:intergenic | 25.0% |
| ! | GTTTAAATGAAGGGTAAATT+TGG | - | chr4.3:74841714-74841733 | MS.gene68917:intron | 25.0% |
| ! | TAAAAATATGATGGTTGTGT+AGG | + | chr4.3:74843348-74843367 | None:intergenic | 25.0% |
| ! | TAACTCTTAAAAATCATGGT+TGG | + | chr4.3:74843571-74843590 | None:intergenic | 25.0% |
| ! | TAAGATAGATATCTGACTTT+GGG | + | chr4.3:74842301-74842320 | None:intergenic | 25.0% |
| ! | TACTCAAGAGTTTAAATGAA+GGG | - | chr4.3:74841705-74841724 | MS.gene68917:intron | 25.0% |
| ! | TATATCTGAGTTTAGTGAAA+AGG | + | chr4.3:74842475-74842494 | None:intergenic | 25.0% |
| ! | TTAAGATAGATATCTGACTT+TGG | + | chr4.3:74842302-74842321 | None:intergenic | 25.0% |
| ! | TTATTGCTCATATAATCACA+CGG | - | chr4.3:74840609-74840628 | MS.gene68917:CDS | 25.0% |
| ! | TTTCAAAAGACTCTCTTATT+GGG | + | chr4.3:74841655-74841674 | None:intergenic | 25.0% |
| !! | CATATTTGGGATTAATTTGA+CGG | + | chr4.3:74843739-74843758 | None:intergenic | 25.0% |
| !! | CATATTTTGTCAAAAGAAAC+TGG | - | chr4.3:74843279-74843298 | MS.gene68917:intron | 25.0% |
| !! | GTTTGTGTATTTTATTGAGT+GGG | - | chr4.3:74842927-74842946 | MS.gene68917:CDS | 25.0% |
| !! | TGTTTGTGTATTTTATTGAG+TGG | - | chr4.3:74842926-74842945 | MS.gene68917:CDS | 25.0% |
| !! | TTATTTCTCAATTCCTTTCA+TGG | - | chr4.3:74843768-74843787 | MS.gene68917:intron | 25.0% |
| !! | TTGGTATCCCTTTTATATAT+AGG | - | chr4.3:74841760-74841779 | MS.gene68917:intron | 25.0% |
| !! | TTTTCAAAAGACTCTCTTAT+TGG | + | chr4.3:74841656-74841675 | None:intergenic | 25.0% |
| !! | TTTTTCCATCAAAAATTTGG+CGG | - | chr4.3:74843813-74843832 | MS.gene68917:intron | 25.0% |
| !!! | AGCTTTTTCCATCAAAAATT+TGG | - | chr4.3:74843810-74843829 | MS.gene68917:intron | 25.0% |
| !!! | GGTTTTTAATCTTTTGTTGT+TGG | - | chr4.3:74844630-74844649 | MS.gene68917:intron | 25.0% |
| !!! | TGTATTTGTTTCTATGTTTG+TGG | - | chr4.3:74842857-74842876 | MS.gene68917:intron | 25.0% |
| !!! | TGTTTGAAATGACAAAGTTT+TGG | + | chr4.3:74843983-74844002 | None:intergenic | 25.0% |
| !!! | TGTTTGTGTTATTTATAGCT+TGG | - | chr4.3:74840665-74840684 | MS.gene68917:intron | 25.0% |
| !!! | TTAATGTTTGTAGGTTTTGA+AGG | - | chr4.3:74842365-74842384 | MS.gene68917:intron | 25.0% |
| AAGTTCATGTCAAAGAAGAA+AGG | + | chr4.3:74842015-74842034 | None:intergenic | 30.0% | |
| ACAAACTGGAATATTCAGAA+TGG | - | chr4.3:74844305-74844324 | MS.gene68917:intron | 30.0% | |
| ACTACTTTCTATTGCTTACT+AGG | - | chr4.3:74840697-74840716 | MS.gene68917:intron | 30.0% | |
| ACTGTTAAAGAGTTCCAAAT+CGG | - | chr4.3:74843465-74843484 | MS.gene68917:intron | 30.0% | |
| AGAATACAAAATACCAGTGA+AGG | + | chr4.3:74844059-74844078 | None:intergenic | 30.0% | |
| AGTCATTACCTGTTAACTTA+TGG | - | chr4.3:74844553-74844572 | MS.gene68917:intron | 30.0% | |
| AGTTCATGTCAAAGAAGAAA+GGG | + | chr4.3:74842014-74842033 | None:intergenic | 30.0% | |
| ATGCATTGAGTCAAATGTAT+CGG | + | chr4.3:74843630-74843649 | None:intergenic | 30.0% | |
| CTACTCAAGAGTTTAAATGA+AGG | - | chr4.3:74841704-74841723 | MS.gene68917:intron | 30.0% | |
| CTGAACATGTGTTTATAAGT+GGG | - | chr4.3:74843500-74843519 | MS.gene68917:intron | 30.0% | |
| GAAATTAGGATACAACAACT+GGG | - | chr4.3:74841434-74841453 | MS.gene68917:intron | 30.0% | |
| GAAGTTTCAAGAAGTTACAT+TGG | - | chr4.3:74842235-74842254 | MS.gene68917:CDS | 30.0% | |
| GTAATCAAACAGATCTAAAC+AGG | + | chr4.3:74843447-74843466 | None:intergenic | 30.0% | |
| TAAAAAGCGATACAAAGACT+TGG | - | chr4.3:74841741-74841760 | MS.gene68917:intron | 30.0% | |
| TACCTGTTAACTTATGGATA+TGG | - | chr4.3:74844559-74844578 | MS.gene68917:intron | 30.0% | |
| TCAAAGAAAATAGGCAGTAA+TGG | + | chr4.3:74842427-74842446 | None:intergenic | 30.0% | |
| TGAAATTAGGATACAACAAC+TGG | - | chr4.3:74841433-74841452 | MS.gene68917:intron | 30.0% | |
| TGAACATGTGTTTATAAGTG+GGG | - | chr4.3:74843501-74843520 | MS.gene68917:intron | 30.0% | |
| TGAAGTTTAATGCATATGGA+GGG | - | chr4.3:74842564-74842583 | MS.gene68917:intron | 30.0% | |
| TGTATAATCTGATGAAAACC+AGG | + | chr4.3:74841838-74841857 | None:intergenic | 30.0% | |
| ! | AAGCTTAATTTTTGCCATGA+TGG | + | chr4.3:74841252-74841271 | None:intergenic | 30.0% |
| ! | ACTGGTATTTTGTATTCTGT+TGG | - | chr4.3:74844061-74844080 | MS.gene68917:intron | 30.0% |
| ! | CTGGTATTTTGTATTCTGTT+GGG | - | chr4.3:74844062-74844081 | MS.gene68917:intron | 30.0% |
| ! | TTTTGTTGGGTGAAATACAT+GGG | - | chr4.3:74841554-74841573 | MS.gene68917:intron | 30.0% |
| ! | TTTTTCATGAATGTGTAGGT+TGG | - | chr4.3:74843001-74843020 | MS.gene68917:intron | 30.0% |
| !! | TGACATGAACTTTTTAAGCA+GGG | - | chr4.3:74842023-74842042 | MS.gene68917:intron | 30.0% |
| !! | TTGACATGAACTTTTTAAGC+AGG | - | chr4.3:74842022-74842041 | MS.gene68917:intron | 30.0% |
| !!! | AAGTCCACCATTTTAAAACT+AGG | + | chr4.3:74841599-74841618 | None:intergenic | 30.0% |
| !!! | GTTTTAGTTTTGCTTTCTTG+TGG | - | chr4.3:74842692-74842711 | MS.gene68917:intron | 30.0% |
| AAAACGTCAACAGTATGATC+AGG | - | chr4.3:74842395-74842414 | MS.gene68917:intron | 35.0% | |
| AAACTTGTAAGCGATGCAAA+GGG | - | chr4.3:74844183-74844202 | MS.gene68917:intron | 35.0% | |
| AATATCCTGATCACCATGAA+AGG | + | chr4.3:74843784-74843803 | None:intergenic | 35.0% | |
| ACCACTTTGGTTGTTTACAT+AGG | + | chr4.3:74843035-74843054 | None:intergenic | 35.0% | |
| ACGAAGTTTAACAACGCAAT+GGG | + | chr4.3:74841026-74841045 | None:intergenic | 35.0% | |
| ACTATATGGGAATGTACTGA+TGG | - | chr4.3:74844609-74844628 | MS.gene68917:intron | 35.0% | |
| AGAAAAGCCGACAAAATAAC+AGG | + | chr4.3:74841206-74841225 | None:intergenic | 35.0% | |
| AGAAGAAAGGGAAAAGGTAA+AGG | + | chr4.3:74842002-74842021 | None:intergenic | 35.0% | |
| AGAAGTTACATTGGCATATG+AGG | - | chr4.3:74842244-74842263 | MS.gene68917:CDS | 35.0% | |
| ATACCAGCAGTCAGTTAATT+TGG | + | chr4.3:74842336-74842355 | None:intergenic | 35.0% | |
| ATCTTTATGATCACAGACTG+TGG | - | chr4.3:74843921-74843940 | MS.gene68917:intron | 35.0% | |
| CACCATATCCATAAGTTAAC+AGG | + | chr4.3:74844564-74844583 | None:intergenic | 35.0% | |
| CCACTTATAAACACATGTTC+AGG | + | chr4.3:74843502-74843521 | None:intergenic | 35.0% | |
| CCTGAACATGTGTTTATAAG+TGG | - | chr4.3:74843499-74843518 | MS.gene68917:intron | 35.0% | |
| CTAGGATAGTAGATGTATGT+AGG | - | chr4.3:74840715-74840734 | MS.gene68917:intron | 35.0% | |
| CTGTTAACTTATGGATATGG+TGG | - | chr4.3:74844562-74844581 | MS.gene68917:intron | 35.0% | |
| CTTCTTTCCAATGAATGCTA+GGG | + | chr4.3:74842744-74842763 | None:intergenic | 35.0% | |
| CTTTGTTCCTTTGACAACTT+TGG | + | chr4.3:74844687-74844706 | None:intergenic | 35.0% | |
| GAACATGTGTTTATAAGTGG+GGG | - | chr4.3:74843502-74843521 | MS.gene68917:intron | 35.0% | |
| GAAGAAAGGGAAAAGGTAAA+GGG | + | chr4.3:74842001-74842020 | None:intergenic | 35.0% | |
| GAATGTAGCAAGTCATTACA+TGG | + | chr4.3:74843111-74843130 | None:intergenic | 35.0% | |
| GATAGAAAAAGAAAGACGGA+GGG | - | chr4.3:74842650-74842669 | MS.gene68917:intron | 35.0% | |
| GGGAACTGGAAAAATTGTAT+CGG | - | chr4.3:74844350-74844369 | MS.gene68917:intron | 35.0% | |
| GTATTTCACCCAACAAAAGA+GGG | + | chr4.3:74841552-74841571 | None:intergenic | 35.0% | |
| GTGAAGTTTAATGCATATGG+AGG | - | chr4.3:74842563-74842582 | MS.gene68917:intron | 35.0% | |
| TAAAACTAGGCCCCTAAAAT+TGG | + | chr4.3:74841586-74841605 | None:intergenic | 35.0% | |
| TAAACTTCGTCCTTTGATGT+GGG | - | chr4.3:74841106-74841125 | MS.gene68917:intron | 35.0% | |
| TACCAGCAGTCAGTTAATTT+GGG | + | chr4.3:74842335-74842354 | None:intergenic | 35.0% | |
| TATGTAAACAACCAAAGTGG+TGG | - | chr4.3:74843034-74843053 | MS.gene68917:intron | 35.0% | |
| TCAATTGAACAACACTTCTC+AGG | + | chr4.3:74844258-74844277 | None:intergenic | 35.0% | |
| TCTTCTTTCCAATGAATGCT+AGG | + | chr4.3:74842745-74842764 | None:intergenic | 35.0% | |
| TGATAGAAAAAGAAAGACGG+AGG | - | chr4.3:74842649-74842668 | MS.gene68917:intron | 35.0% | |
| TGTATTTCACCCAACAAAAG+AGG | + | chr4.3:74841553-74841572 | None:intergenic | 35.0% | |
| TGTCAAAGAAGAAAGGGAAA+AGG | + | chr4.3:74842008-74842027 | None:intergenic | 35.0% | |
| TGTGGTTGAACTATCTTTCA+CGG | - | chr4.3:74843939-74843958 | MS.gene68917:intron | 35.0% | |
| TGTTCTTGTATCCATTTACG+TGG | - | chr4.3:74844463-74844482 | MS.gene68917:CDS | 35.0% | |
| TTAAACTTCGTCCTTTGATG+TGG | - | chr4.3:74841105-74841124 | MS.gene68917:intron | 35.0% | |
| TTCCAGTTTGTACAAACATC+TGG | + | chr4.3:74844296-74844315 | None:intergenic | 35.0% | |
| TTCTTTCCAATGAATGCTAG+GGG | + | chr4.3:74842743-74842762 | None:intergenic | 35.0% | |
| TTTGTTGGGTGAAATACATG+GGG | - | chr4.3:74841555-74841574 | MS.gene68917:intron | 35.0% | |
| ! | AGTGAGATGTGTTGATATCA+AGG | + | chr4.3:74844112-74844131 | None:intergenic | 35.0% |
| ! | CTGGAAAAATTGTATCGGTA+TGG | - | chr4.3:74844355-74844374 | MS.gene68917:intron | 35.0% |
| ! | CTTAATTTTTGCCATGATGG+AGG | + | chr4.3:74841249-74841268 | None:intergenic | 35.0% |
| ! | CTTTTGTTGGGTGAAATACA+TGG | - | chr4.3:74841553-74841572 | MS.gene68917:intron | 35.0% |
| !!! | ACACTGACCTGTTATTTTGT+CGG | - | chr4.3:74841196-74841215 | MS.gene68917:intron | 35.0% |
| !!! | GTTTGTAGGTTTTGAAGGAT+GGG | - | chr4.3:74842370-74842389 | MS.gene68917:intron | 35.0% |
| !!! | TGTTTGTAGGTTTTGAAGGA+TGG | - | chr4.3:74842369-74842388 | MS.gene68917:intron | 35.0% |
| !!! | TTAGGGGCCTAGTTTTAAAA+TGG | - | chr4.3:74841589-74841608 | MS.gene68917:intron | 35.0% |
| !!! | TTTGTAGGTTTTGAAGGATG+GGG | - | chr4.3:74842371-74842390 | MS.gene68917:intron | 35.0% |
| AAAATTTGACCCCACTTAGC+GGG | + | chr4.3:74841466-74841485 | None:intergenic | 40.0% | |
| AACAACCAAAGTGGTGGTTT+CGG | - | chr4.3:74843040-74843059 | MS.gene68917:intron | 40.0% | |
| AAGAAAGCTTACTATGGGGT+AGG | - | chr4.3:74840925-74840944 | MS.gene68917:intron | 40.0% | |
| AAGCCCTATTACACTAAGTG+GGG | - | chr4.3:74841912-74841931 | MS.gene68917:intron | 40.0% | |
| AAGTACTTGTGCTACATGCA+AGG | - | chr4.3:74844329-74844348 | MS.gene68917:intron | 40.0% | |
| ACAAGCCCTATTACACTAAG+TGG | - | chr4.3:74841910-74841929 | MS.gene68917:intron | 40.0% | |
| AGGAGCTATTACGATGTTCT+TGG | - | chr4.3:74840871-74840890 | MS.gene68917:intron | 40.0% | |
| AGTACTTGTGCTACATGCAA+GGG | - | chr4.3:74844330-74844349 | MS.gene68917:intron | 40.0% | |
| ATCCCAAATTAACTGACTGC+TGG | - | chr4.3:74842330-74842349 | MS.gene68917:intron | 40.0% | |
| ATGGTTGTGTAGGATTGCTT+AGG | + | chr4.3:74843338-74843357 | None:intergenic | 40.0% | |
| CAAAATTTGACCCCACTTAG+CGG | + | chr4.3:74841467-74841486 | None:intergenic | 40.0% | |
| CAACCCCACTTAGTGTAATA+GGG | + | chr4.3:74841918-74841937 | None:intergenic | 40.0% | |
| CAACTATGCACAAGAAAGCA+AGG | + | chr4.3:74840782-74840801 | None:intergenic | 40.0% | |
| CAAGCCCTATTACACTAAGT+GGG | - | chr4.3:74841911-74841930 | MS.gene68917:intron | 40.0% | |
| CAATTCCTTTCATGGTGATC+AGG | - | chr4.3:74843776-74843795 | MS.gene68917:intron | 40.0% | |
| CGCAAATAAAGATGATCCTG+AGG | - | chr4.3:74842205-74842224 | MS.gene68917:intron | 40.0% | |
| CTAACACAACCCCACAAAAT+CGG | + | chr4.3:74843546-74843565 | None:intergenic | 40.0% | |
| GAAACTTGTAAGCGATGCAA+AGG | - | chr4.3:74844182-74844201 | MS.gene68917:intron | 40.0% | |
| GAATGTGCTGAAACTTCAGT+CGG | - | chr4.3:74843416-74843435 | MS.gene68917:intron | 40.0% | |
| GACGAAGTTTAACAACGCAA+TGG | + | chr4.3:74841027-74841046 | None:intergenic | 40.0% | |
| GCCTATGTAAACAACCAAAG+TGG | - | chr4.3:74843031-74843050 | MS.gene68917:intron | 40.0% | |
| GTCCAGATGTTTGTACAAAC+TGG | - | chr4.3:74844291-74844310 | MS.gene68917:intron | 40.0% | |
| GTTCCAAATCGGACAAAAGA+TGG | - | chr4.3:74843476-74843495 | MS.gene68917:intron | 40.0% | |
| TATGAATTGTCGTCCTTCAC+TGG | - | chr4.3:74844043-74844062 | MS.gene68917:intron | 40.0% | |
| TCTCGAATGAATACCATAGC+TGG | - | chr4.3:74841223-74841242 | MS.gene68917:intron | 40.0% | |
| TCTTTCCAATGAATGCTAGG+GGG | + | chr4.3:74842742-74842761 | None:intergenic | 40.0% | |
| TGAAAGAGGCAGTAGATACT+AGG | + | chr4.3:74842966-74842985 | None:intergenic | 40.0% | |
| TGCATGTGCGTAACATCATT+CGG | + | chr4.3:74841627-74841646 | None:intergenic | 40.0% | |
| TTGCATCGCTTACAAGTTTC+AGG | + | chr4.3:74844182-74844201 | None:intergenic | 40.0% | |
| ! | CATCTTTATTTGCGTCTGGA+TGG | + | chr4.3:74842199-74842218 | None:intergenic | 40.0% |
| ! | CTTCTCCGCCAAATTTTTGA+TGG | + | chr4.3:74843821-74843840 | None:intergenic | 40.0% |
| ! | GAGTTGTGTTTTATGTGTCC+TGG | - | chr4.3:74841817-74841836 | MS.gene68917:intron | 40.0% |
| ! | GGATCATCTTTATTTGCGTC+TGG | + | chr4.3:74842203-74842222 | None:intergenic | 40.0% |
| ! | GTCAAGTTGCATACTTATCC+TGG | - | chr4.3:74844710-74844729 | MS.gene68917:intron | 40.0% |
| ! | TAAGTTGTTGGCCTCTTTCA+TGG | - | chr4.3:74842599-74842618 | MS.gene68917:intron | 40.0% |
| ! | TGAAACTTCTTTTCAGCCTC+AGG | + | chr4.3:74842224-74842243 | None:intergenic | 40.0% |
| !!! | AAGGCTTGGTTTTTGGTTGT+TGG | - | chr4.3:74842122-74842141 | MS.gene68917:intron | 40.0% |
| !!! | CAAGTTTCAGGTTTTGTACC+AGG | + | chr4.3:74844170-74844189 | None:intergenic | 40.0% |
| AAACTATCTCGCAGCATCGT+TGG | - | chr4.3:74840846-74840865 | MS.gene68917:intron | 45.0% | |
| AACGATGCTGCGAGATAGTT+TGG | + | chr4.3:74840847-74840866 | None:intergenic | 45.0% | |
| AACTAGGCCCCTAAAATTGG+TGG | + | chr4.3:74841583-74841602 | None:intergenic | 45.0% | |
| AAGTCATTACATGGCCACCA+CGG | + | chr4.3:74843102-74843121 | None:intergenic | 45.0% | |
| ACGATGCTGCGAGATAGTTT+GGG | + | chr4.3:74840846-74840865 | None:intergenic | 45.0% | |
| ACTAGGCCCCTAAAATTGGT+GGG | + | chr4.3:74841582-74841601 | None:intergenic | 45.0% | |
| ACTGAAGACTGCCACGTAAA+TGG | + | chr4.3:74844477-74844496 | None:intergenic | 45.0% | |
| AGTTTCTGCAAGTCTTGCCA+AGG | - | chr4.3:74844659-74844678 | MS.gene68917:intron | 45.0% | |
| ATTTGGCGGAGAAGATGTCA+AGG | - | chr4.3:74843827-74843846 | MS.gene68917:intron | 45.0% | |
| CACTCCCACCTGAAATAGTT+CGG | + | chr4.3:74844139-74844158 | None:intergenic | 45.0% | |
| CACTGTTGCCGAACTATTTC+AGG | - | chr4.3:74844128-74844147 | MS.gene68917:intron | 45.0% | |
| CATTTCCCCCTAGCATTCAT+TGG | - | chr4.3:74842734-74842753 | MS.gene68917:intron | 45.0% | |
| CCAACCCCACTTAGTGTAAT+AGG | + | chr4.3:74841919-74841938 | None:intergenic | 45.0% | |
| CCTATTACACTAAGTGGGGT+TGG | - | chr4.3:74841916-74841935 | MS.gene68917:intron | 45.0% | |
| CTTTCACGGAAGCTATCCAA+GGG | - | chr4.3:74843953-74843972 | MS.gene68917:intron | 45.0% | |
| CTTTGACAACTTTGGCACCT+TGG | + | chr4.3:74844679-74844698 | None:intergenic | 45.0% | |
| GACGTGCTTTGTAATGCTTG+TGG | - | chr4.3:74844003-74844022 | MS.gene68917:intron | 45.0% | |
| TCTTTCACGGAAGCTATCCA+AGG | - | chr4.3:74843952-74843971 | MS.gene68917:intron | 45.0% | |
| TCTTTGCAAGCTGCAGAGTA+TGG | + | chr4.3:74842172-74842191 | None:intergenic | 45.0% | |
| TGTTGCCGAACTATTTCAGG+TGG | - | chr4.3:74844131-74844150 | MS.gene68917:intron | 45.0% | |
| TTATTGCCGACCCACTTAGT+GGG | - | chr4.3:74842097-74842116 | MS.gene68917:intron | 45.0% | |
| TTGCTTAGGATCTGCTCGTA+TGG | + | chr4.3:74843324-74843343 | None:intergenic | 45.0% | |
| TTTCCGGATCTCCATGAAAG+AGG | + | chr4.3:74842613-74842632 | None:intergenic | 45.0% | |
| ! | ACTAACGCTCCCTCTTTTGT+TGG | - | chr4.3:74841540-74841559 | MS.gene68917:intron | 45.0% |
| ! | AGGCCATCTTTTGTCCGATT+TGG | + | chr4.3:74843482-74843501 | None:intergenic | 45.0% |
| ! | ATGGGGTCCCACCAATTTTA+GGG | - | chr4.3:74841572-74841591 | MS.gene68917:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.3:74842110-74842129 | None:intergenic | 45.0% |
| ! | CAAGGTGCCAAAGTTGTCAA+AGG | - | chr4.3:74844677-74844696 | MS.gene68917:intron | 45.0% |
| ! | CGATGTTCTTGGTGTGAGTA+AGG | - | chr4.3:74840882-74840901 | MS.gene68917:intron | 45.0% |
| ! | CGATTTTGTGGGGTTGTGTT+AGG | - | chr4.3:74843544-74843563 | MS.gene68917:intron | 45.0% |
| ! | CTAACGCTCCCTCTTTTGTT+GGG | - | chr4.3:74841541-74841560 | MS.gene68917:intron | 45.0% |
| ! | GTTGCCGAACTATTTCAGGT+GGG | - | chr4.3:74844132-74844151 | MS.gene68917:intron | 45.0% |
| !! | ACAAAGTTTTGGTGCACCCT+TGG | + | chr4.3:74843972-74843991 | None:intergenic | 45.0% |
| !! | GTGGGATAAGGCTTGGTTTT+TGG | - | chr4.3:74842115-74842134 | MS.gene68917:intron | 45.0% |
| !!! | GGGGCCTAGTTTTAAAATGG+TGG | - | chr4.3:74841592-74841611 | MS.gene68917:intron | 45.0% |
| !!! | GTTTCAGGTTTTGTACCAGG+AGG | + | chr4.3:74844167-74844186 | None:intergenic | 45.0% |
| AACCAAAGTGGTGGTTTCGG+AGG | - | chr4.3:74843043-74843062 | MS.gene68917:intron | 50.0% | |
| AGGAGTGGTCAGTATCGTGT+TGG | - | chr4.3:74844208-74844227 | MS.gene68917:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.3:74842108-74842127 | MS.gene68917:intron | 50.0% | |
| CCTCTCTCATCCCACATCAA+AGG | + | chr4.3:74841119-74841138 | None:intergenic | 50.0% | |
| CCTTATCCCACTAAGTGGGT+CGG | + | chr4.3:74842106-74842125 | None:intergenic | 50.0% | |
| CCTTTGATGTGGGATGAGAG+AGG | - | chr4.3:74841116-74841135 | MS.gene68917:intron | 50.0% | |
| CTTATTGCCGACCCACTTAG+TGG | - | chr4.3:74842096-74842115 | MS.gene68917:intron | 50.0% | |
| TGGCCTCTTTCATGGAGATC+CGG | - | chr4.3:74842607-74842626 | MS.gene68917:intron | 50.0% | |
| TGTAAGCGATGCAAAGGGTC+AGG | - | chr4.3:74844188-74844207 | MS.gene68917:intron | 50.0% | |
| TGTGCTACATGCAAGGGAAC+TGG | - | chr4.3:74844336-74844355 | MS.gene68917:intron | 50.0% | |
| ! | CATGGGGTCCCACCAATTTT+AGG | - | chr4.3:74841571-74841590 | MS.gene68917:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.3:74842111-74842130 | None:intergenic | 50.0% |
| ! | CGAACTATTTCAGGTGGGAG+TGG | - | chr4.3:74844137-74844156 | MS.gene68917:intron | 50.0% |
| ! | TGGGGTCCCACCAATTTTAG+GGG | - | chr4.3:74841573-74841592 | MS.gene68917:intron | 50.0% |
| ! | TGGGTCTTATCCCGCTAAGT+GGG | - | chr4.3:74841453-74841472 | MS.gene68917:intron | 50.0% |
| !! | ACCCTACGAGCCGATTTTGT+GGG | - | chr4.3:74843533-74843552 | MS.gene68917:intron | 50.0% |
| AGTGGTGGTTTCGGAGGCAA+TGG | - | chr4.3:74843049-74843068 | MS.gene68917:intron | 55.0% | |
| ATCTCGCAGCATCGTTGGCA+AGG | - | chr4.3:74840851-74840870 | MS.gene68917:intron | 55.0% | |
| CCACGGAACATCTGCTCGAA+AGG | + | chr4.3:74843085-74843104 | None:intergenic | 55.0% | |
| CCGACCCACTTAGTGGGATA+AGG | - | chr4.3:74842103-74842122 | MS.gene68917:intron | 55.0% | |
| CCTTTCGAGCAGATGTTCCG+TGG | - | chr4.3:74843082-74843101 | MS.gene68917:CDS | 55.0% | |
| GCAAGCTGCAGAGTATGGAG+AGG | + | chr4.3:74842167-74842186 | None:intergenic | 55.0% | |
| TGCCTCCGAAACCACCACTT+TGG | + | chr4.3:74843048-74843067 | None:intergenic | 55.0% | |
| TTCGAGCAGATGTTCCGTGG+TGG | - | chr4.3:74843085-74843104 | MS.gene68917:CDS | 55.0% | |
| ! | ACCATAGCTGGCCTCCATCA+TGG | - | chr4.3:74841235-74841254 | MS.gene68917:intron | 55.0% |
| ! | CTGGGTCTTATCCCGCTAAG+TGG | - | chr4.3:74841452-74841471 | MS.gene68917:intron | 55.0% |
| ! | GGGTCTTATCCCGCTAAGTG+GGG | - | chr4.3:74841454-74841473 | MS.gene68917:intron | 55.0% |
| !! | ACCCCACAAAATCGGCTCGT+AGG | + | chr4.3:74843538-74843557 | None:intergenic | 55.0% |
| !! | CAAAATCGGCTCGTAGGGTG+AGG | + | chr4.3:74843532-74843551 | None:intergenic | 55.0% |
| !! | CACCCTACGAGCCGATTTTG+TGG | - | chr4.3:74843532-74843551 | MS.gene68917:intron | 55.0% |
| !! | CCCCACAAAATCGGCTCGTA+GGG | + | chr4.3:74843537-74843556 | None:intergenic | 55.0% |
| !! | CCCTACGAGCCGATTTTGTG+GGG | - | chr4.3:74843534-74843553 | MS.gene68917:intron | 55.0% |
| GCGATGCAAAGGGTCAGGAG+TGG | - | chr4.3:74844193-74844212 | MS.gene68917:intron | 60.0% | |
| GGTGGTTTCGGAGGCAATGG+TGG | - | chr4.3:74843052-74843071 | MS.gene68917:intron | 60.0% | |
| ! | GCCATGATGGAGGCCAGCTA+TGG | + | chr4.3:74841239-74841258 | None:intergenic | 60.0% |
| GGTGGGAGTGGTCTTCCTCC+TGG | - | chr4.3:74844149-74844168 | MS.gene68917:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 74840553 | 74844778 | 74840553 | ID=MS.gene68917 |
| chr4.3 | mRNA | 74840553 | 74844778 | 74840553 | ID=MS.gene68917.t1;Parent=MS.gene68917 |
| chr4.3 | exon | 74844770 | 74844778 | 74844770 | ID=MS.gene68917.t1.exon1;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74844770 | 74844778 | 74844770 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74844389 | 74844532 | 74844389 | ID=MS.gene68917.t1.exon2;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74844389 | 74844532 | 74844389 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74843066 | 74843149 | 74843066 | ID=MS.gene68917.t1.exon3;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74843066 | 74843149 | 74843066 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74842915 | 74842953 | 74842915 | ID=MS.gene68917.t1.exon4;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74842915 | 74842953 | 74842915 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74842220 | 74842312 | 74842220 | ID=MS.gene68917.t1.exon5;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74842220 | 74842312 | 74842220 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74841483 | 74841533 | 74841483 | ID=MS.gene68917.t1.exon6;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74841483 | 74841533 | 74841483 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74841307 | 74841394 | 74841307 | ID=MS.gene68917.t1.exon7;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74841307 | 74841394 | 74841307 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74841117 | 74841181 | 74841117 | ID=MS.gene68917.t1.exon8;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74841117 | 74841181 | 74841117 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74840960 | 74841034 | 74840960 | ID=MS.gene68917.t1.exon9;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74840960 | 74841034 | 74840960 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| chr4.3 | exon | 74840553 | 74840672 | 74840553 | ID=MS.gene68917.t1.exon10;Parent=MS.gene68917.t1 |
| chr4.3 | CDS | 74840553 | 74840672 | 74840553 | ID=cds.MS.gene68917.t1;Parent=MS.gene68917.t1 |
| Gene Sequence |
| Protein sequence |
