AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68939


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68939.t1 MTR_4g132280 98.273 521 9 0 1 521 1 521 0.0 1053
MS.gene68939.t1 MTR_5g078200 60.230 435 173 0 40 474 18 452 0.0 563
MS.gene68939.t1 MTR_1g031900 59.333 450 177 2 44 487 23 472 0.0 561
MS.gene68939.t1 MTR_1g031900 59.954 432 173 0 44 475 23 454 0.0 558
MS.gene68939.t1 MTR_5g078200 60.382 419 166 0 56 474 1 419 0.0 543
MS.gene68939.t1 MTR_3g065460 56.782 435 188 0 40 474 19 453 0.0 527
MS.gene68939.t1 MTR_8g085720 53.380 429 199 1 42 469 23 451 3.50e-167 483
MS.gene68939.t1 MTR_3g083580 50.577 433 211 2 42 473 23 453 1.24e-159 463
MS.gene68939.t1 MTR_5g085580 41.480 446 235 4 45 467 25 467 4.87e-121 363
MS.gene68939.t1 MTR_6g088885 40.618 453 255 5 42 485 24 471 8.38e-117 354
MS.gene68939.t1 MTR_1g056640 38.293 457 245 5 45 467 38 491 4.15e-111 339
MS.gene68939.t1 MTR_8g102340 41.975 405 223 5 103 499 52 452 5.90e-106 325
MS.gene68939.t1 MTR_7g053500 38.073 436 253 7 46 467 27 459 1.34e-93 293
MS.gene68939.t1 MTR_8g012400 36.721 433 260 6 46 467 30 459 5.70e-92 289
MS.gene68939.t1 MTR_4g088155 36.818 440 257 7 45 467 23 458 2.40e-91 287
MS.gene68939.t1 MTR_4g069940 35.469 437 265 4 44 467 28 460 5.46e-89 281
MS.gene68939.t1 MTR_4g083500 35.833 480 270 12 45 494 44 515 1.83e-87 279
MS.gene68939.t1 MTR_1g022160 34.423 459 266 5 43 469 22 477 2.22e-86 275
MS.gene68939.t1 MTR_1g022160 34.649 456 263 5 43 466 22 474 8.32e-86 273
MS.gene68939.t1 MTR_7g026340 35.763 439 250 11 45 465 23 447 3.48e-84 268
MS.gene68939.t1 MTR_7g053500 38.542 384 219 7 98 467 2 382 4.07e-83 263
MS.gene68939.t1 MTR_3g080410 42.547 322 181 3 42 362 23 341 4.97e-83 262
MS.gene68939.t1 MTR_1g022160 34.298 449 260 5 43 459 22 467 5.65e-83 266
MS.gene68939.t1 MTR_3g116510 34.101 434 273 4 44 468 27 456 6.39e-83 265
MS.gene68939.t1 MTR_8g012400 35.433 381 232 6 98 467 2 379 2.32e-77 248
MS.gene68939.t1 MTR_4g084480 39.264 326 193 3 46 370 26 347 9.33e-76 244
MS.gene68939.t1 MTR_4g084480 39.264 326 193 3 46 370 33 354 1.25e-75 244
MS.gene68939.t1 MTR_4g084480 39.144 327 194 3 45 370 32 354 1.81e-75 244
MS.gene68939.t1 MTR_1g077990 40.432 324 187 4 45 367 31 349 4.95e-73 238
MS.gene68939.t1 MTR_4g010200 37.538 325 199 2 46 369 34 355 9.97e-73 236
MS.gene68939.t1 MTR_4g114850 38.154 325 197 2 46 369 27 348 1.67e-72 235
MS.gene68939.t1 MTR_4g114850 38.154 325 197 2 46 369 27 348 1.78e-72 235
MS.gene68939.t1 MTR_2g086530 38.532 327 194 3 39 364 2 322 5.06e-72 234
MS.gene68939.t1 MTR_4g114850 38.154 325 197 2 46 369 27 348 6.31e-72 234
MS.gene68939.t1 MTR_4g052970 37.462 331 202 3 39 368 23 349 1.06e-71 233
MS.gene68939.t1 MTR_2g086530 38.462 325 193 3 39 362 23 341 1.08e-71 234
MS.gene68939.t1 MTR_1g007810 40.498 321 180 6 45 362 16 328 7.97e-70 228
MS.gene68939.t1 MTR_2g019345 39.441 322 189 4 42 362 21 337 3.87e-68 224
MS.gene68939.t1 MTR_1g022160 36.449 321 201 2 43 362 22 340 2.69e-63 213
MS.gene68939.t1 MTR_7g081350 35.312 320 196 6 45 364 27 335 4.66e-62 207
MS.gene68939.t1 MTR_3g116510 33.129 326 206 3 151 468 1 322 2.27e-58 197
MS.gene68939.t1 MTR_2g027560 31.954 435 271 13 45 466 28 450 8.12e-58 200
MS.gene68939.t1 MTR_2g034480 35.474 327 196 8 45 368 27 341 1.23e-55 191
MS.gene68939.t1 MTR_4g112025 29.461 482 294 17 2 467 6 457 5.10e-55 193
MS.gene68939.t1 MTR_3g031770 30.512 449 271 14 45 474 27 453 1.76e-54 191
MS.gene68939.t1 MTR_1g053320 29.778 450 269 13 44 467 29 457 4.14e-54 190
MS.gene68939.t1 MTR_4g076490 33.538 325 201 5 45 369 97 406 5.70e-54 188
MS.gene68939.t1 MTR_4g076570 32.258 310 201 3 45 354 22 322 6.27e-54 186
MS.gene68939.t1 MTR_2g034470 34.969 326 199 7 45 368 30 344 1.88e-53 185
MS.gene68939.t1 MTR_2g034440 35.256 312 189 6 45 354 22 322 3.30e-53 183
MS.gene68939.t1 MTR_4g076255 33.750 320 196 6 45 364 25 328 2.20e-52 181
MS.gene68939.t1 MTR_2g034470 34.810 316 193 7 55 368 5 309 2.22e-52 181
MS.gene68939.t1 MTR_8g092070 29.385 439 284 13 43 467 32 458 3.72e-52 187
MS.gene68939.t1 MTR_4g076430 34.268 321 193 7 45 364 23 326 5.18e-52 180
MS.gene68939.t1 MTR_4g076500 31.290 310 202 2 45 354 78 376 6.18e-52 181
MS.gene68939.t1 MTR_7g081370 32.812 320 191 7 45 364 28 323 9.93e-52 179
MS.gene68939.t1 MTR_4g076440 33.019 318 197 6 45 362 23 324 1.11e-51 179
MS.gene68939.t1 MTR_4g076470 33.333 318 196 6 45 362 23 324 3.49e-51 178
MS.gene68939.t1 MTR_1g052430 32.258 310 201 4 45 354 32 332 1.00e-50 179
MS.gene68939.t1 MTR_1g010120 29.655 435 281 14 45 466 26 448 8.12e-50 178
MS.gene68939.t1 MTR_3g108600 29.452 438 260 15 45 466 31 435 2.18e-49 177
MS.gene68939.t1 MTR_4g124440 28.132 423 270 14 62 466 45 451 1.42e-48 175
MS.gene68939.t1 MTR_7g085390 29.478 441 276 16 45 466 26 450 9.78e-48 172
MS.gene68939.t1 MTR_3g095050 29.157 439 283 15 43 467 32 456 1.61e-47 172
MS.gene68939.t1 MTR_5g081720 34.915 295 182 7 70 362 62 348 3.37e-45 163
MS.gene68939.t1 MTR_6g032820 29.742 427 264 17 45 450 26 437 5.11e-43 159
MS.gene68939.t1 MTR_4g134280 29.086 361 219 13 149 494 21 359 1.85e-36 139
MS.gene68939.t1 MTR_8g085440 50.562 89 43 1 379 467 29 116 8.11e-26 102
MS.gene68939.t1 MTR_8g085390 45.794 107 50 2 363 469 18 116 1.07e-25 104
MS.gene68939.t1 MTR_5g097420 51.724 87 42 0 380 466 28 114 4.91e-25 100
MS.gene68939.t1 MTR_5g091650 43.750 112 58 2 377 488 103 209 2.66e-24 102
MS.gene68939.t1 MTR_5g091650 46.809 94 49 1 377 470 103 195 8.27e-24 99.4
MS.gene68939.t1 MTR_8g089400 49.451 91 44 1 381 469 36 126 8.28e-24 98.2
MS.gene68939.t1 MTR_8g089400 49.451 91 44 1 381 469 56 146 1.78e-23 97.8
MS.gene68939.t1 MTR_2g049670 54.348 92 40 2 382 473 158 247 2.41e-23 101
MS.gene68939.t1 MTR_4g133730 51.765 85 41 0 382 466 28 112 3.59e-23 95.1
MS.gene68939.t1 MTR_7g111600 53.488 86 39 1 382 467 160 244 7.42e-23 98.2
MS.gene68939.t1 MTR_1g084820 54.217 83 36 2 380 462 418 498 1.35e-22 101
MS.gene68939.t1 MTR_7g111600 53.488 86 39 1 382 467 160 244 1.41e-22 98.6
MS.gene68939.t1 MTR_1g084820 54.217 83 36 2 380 462 418 498 1.66e-22 101
MS.gene68939.t1 MTR_7g111600 53.488 86 39 1 382 467 160 244 1.98e-22 98.2
MS.gene68939.t1 MTR_3g048280 53.012 83 38 1 381 463 111 192 3.28e-22 95.1
MS.gene68939.t1 MTR_4g079530 44.330 97 54 0 380 476 35 131 3.83e-22 94.0
MS.gene68939.t1 MTR_8g085420 49.398 83 41 1 380 462 30 111 5.20e-22 92.4
MS.gene68939.t1 MTR_8g088120 41.071 112 57 2 394 505 60 162 1.81e-21 93.6
MS.gene68939.t1 MTR_4g133735 49.412 85 43 0 382 466 28 112 3.62e-21 89.4
MS.gene68939.t1 MTR_5g044530 46.667 90 45 2 382 469 22 110 4.33e-21 93.2
MS.gene68939.t1 MTR_4g083070 49.438 89 43 2 382 469 21 108 7.36e-21 90.9
MS.gene68939.t1 MTR_4g079530 45.455 88 48 0 380 467 35 122 1.40e-20 88.2
MS.gene68939.t1 MTR_8g085400 53.086 81 34 2 380 460 31 107 1.77e-20 87.4
MS.gene68939.t1 MTR_5g015720 47.727 88 45 1 380 466 327 414 2.45e-20 93.6
MS.gene68939.t1 MTR_4g109490 43.820 89 48 2 378 466 20 106 2.00e-18 84.7
MS.gene68939.t1 MTR_3g082080 46.835 79 41 1 382 460 157 234 4.09e-18 84.3
MS.gene68939.t1 MTR_1g116870 40.000 85 50 1 382 466 276 359 1.53e-16 81.6
MS.gene68939.t1 MTR_2g072500 36.782 87 53 1 380 466 6 90 7.61e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68939.t1 AT1G11820 81.278 454 84 1 37 490 36 488 0.0 793
MS.gene68939.t1 AT1G11820 82.311 424 75 0 37 460 36 459 0.0 753
MS.gene68939.t1 AT1G11820 80.299 335 66 0 37 371 36 370 0.0 572
MS.gene68939.t1 AT2G01630 56.667 450 191 1 44 489 22 471 0.0 545
MS.gene68939.t1 AT1G66250 54.167 480 206 3 40 506 27 505 0.0 545
MS.gene68939.t1 AT2G01630 58.753 417 172 0 44 460 22 438 0.0 528
MS.gene68939.t1 AT2G01630 57.493 367 156 0 44 410 22 388 1.98e-154 446
MS.gene68939.t1 AT3G13560 50.465 430 212 1 44 473 25 453 6.46e-151 441
MS.gene68939.t1 AT3G13560 50.465 430 212 1 44 473 25 453 6.46e-151 441
MS.gene68939.t1 AT3G13560 50.465 430 212 1 44 473 25 453 6.46e-151 441
MS.gene68939.t1 AT3G13560 50.465 430 212 1 44 473 25 453 6.46e-151 441
MS.gene68939.t1 AT3G13560 50.465 430 212 1 44 473 25 453 6.46e-151 441
MS.gene68939.t1 AT2G05790 41.295 448 235 5 45 467 25 469 9.64e-121 363
MS.gene68939.t1 AT5G55180 38.391 435 254 3 44 467 26 457 1.91e-109 333
MS.gene68939.t1 AT5G56590 37.267 483 278 8 42 514 23 490 1.12e-108 333
MS.gene68939.t1 AT4G29360 39.381 452 241 2 45 466 27 475 4.52e-107 330
MS.gene68939.t1 AT4G29360 39.381 452 241 2 45 466 37 485 6.08e-107 330
MS.gene68939.t1 AT4G26830 38.568 433 253 4 44 467 28 456 1.89e-106 326
MS.gene68939.t1 AT4G26830 38.657 432 252 4 45 467 25 452 3.41e-106 325
MS.gene68939.t1 AT5G55180 37.995 429 252 3 44 461 26 451 2.62e-104 321
MS.gene68939.t1 AT4G34480 38.695 429 255 4 43 467 24 448 2.17e-95 299
MS.gene68939.t1 AT5G24318 36.250 480 262 11 5 466 2 455 2.49e-93 292
MS.gene68939.t1 AT3G55430 38.479 434 242 13 45 466 29 449 5.72e-93 291
MS.gene68939.t1 AT2G16230 35.597 486 298 7 44 520 24 503 1.82e-92 291
MS.gene68939.t1 AT5G24318 36.076 474 259 11 5 460 2 449 1.44e-89 282
MS.gene68939.t1 AT3G23770 36.818 440 257 6 45 467 37 472 3.12e-88 280
MS.gene68939.t1 AT4G14080 35.021 474 289 8 8 467 6 474 1.75e-86 275
MS.gene68939.t1 AT3G07320 36.782 435 258 8 46 467 26 456 3.24e-86 274
MS.gene68939.t1 AT2G26600 39.130 322 189 3 37 354 23 341 5.73e-77 247
MS.gene68939.t1 AT2G39640 35.748 428 256 12 45 467 30 443 2.40e-76 251
MS.gene68939.t1 AT2G39640 36.364 88 55 1 382 469 460 546 5.01e-15 78.2
MS.gene68939.t1 AT1G32860 41.176 323 183 4 45 364 29 347 1.67e-74 242
MS.gene68939.t1 AT2G27500 37.500 336 198 3 38 368 22 350 5.18e-74 239
MS.gene68939.t1 AT2G27500 37.500 336 198 3 38 368 22 350 1.76e-73 238
MS.gene68939.t1 AT5G24318 39.077 325 177 6 154 466 1 316 2.41e-72 233
MS.gene68939.t1 AT4G34480 38.643 339 200 4 133 467 3 337 1.46e-71 233
MS.gene68939.t1 AT5G42100 38.037 326 194 5 45 366 27 348 4.59e-69 228
MS.gene68939.t1 AT4G18340 37.651 332 202 3 45 375 34 361 8.43e-69 226
MS.gene68939.t1 AT5G42100 38.037 326 194 5 45 366 27 348 8.84e-69 227
MS.gene68939.t1 AT4G18340 37.651 332 202 3 45 375 34 361 3.21e-68 225
MS.gene68939.t1 AT1G30080 37.654 324 197 3 40 362 31 350 6.39e-68 224
MS.gene68939.t1 AT3G15800 36.503 326 202 3 46 369 44 366 6.89e-68 224
MS.gene68939.t1 AT1G30080 37.654 324 197 3 40 362 31 350 1.19e-67 224
MS.gene68939.t1 AT5G24318 36.986 365 199 8 5 362 2 342 4.03e-67 221
MS.gene68939.t1 AT3G61810 35.467 375 223 6 1 367 9 372 2.33e-66 219
MS.gene68939.t1 AT4G34480 38.006 321 195 2 43 362 24 341 2.90e-63 211
MS.gene68939.t1 AT5G42720 36.646 322 199 4 43 362 24 342 6.11e-62 209
MS.gene68939.t1 AT2G26600 40.964 249 142 3 108 354 2 247 6.32e-61 202
MS.gene68939.t1 AT2G27500 38.710 279 159 3 95 368 1 272 2.49e-60 201
MS.gene68939.t1 AT3G57270 35.404 322 197 6 42 362 24 335 7.74e-59 198
MS.gene68939.t1 AT3G46570 39.938 323 180 9 45 362 27 340 2.49e-56 192
MS.gene68939.t1 AT4G16260 35.443 316 193 6 42 357 21 325 2.12e-55 189
MS.gene68939.t1 AT3G24330 30.549 455 276 16 45 477 39 475 7.29e-55 192
MS.gene68939.t1 AT4G16260 35.644 303 184 6 55 357 5 296 1.90e-54 186
MS.gene68939.t1 AT4G17180 32.184 435 263 15 45 466 25 440 2.35e-54 190
MS.gene68939.t1 AT2G19440 30.752 439 274 15 45 467 21 445 6.61e-54 189
MS.gene68939.t1 AT2G19440 30.752 439 274 15 45 467 21 445 6.61e-54 189
MS.gene68939.t1 AT3G57260 35.535 318 190 6 45 362 32 334 7.46e-54 185
MS.gene68939.t1 AT3G57260 35.535 318 190 6 45 362 48 350 8.81e-54 186
MS.gene68939.t1 AT4G31140 30.115 435 278 15 45 466 27 448 1.11e-51 183
MS.gene68939.t1 AT5G64790 27.918 437 289 13 45 467 28 452 1.51e-51 183
MS.gene68939.t1 AT5G20870 27.505 469 310 15 45 495 30 486 2.04e-51 183
MS.gene68939.t1 AT5G18220 29.705 441 278 15 45 467 30 456 1.91e-50 180
MS.gene68939.t1 AT1G64760 29.613 439 279 13 45 467 25 449 1.96e-50 180
MS.gene68939.t1 AT1G64760 29.613 439 279 13 45 467 25 449 1.96e-50 180
MS.gene68939.t1 AT5G58480 29.425 435 278 12 45 466 26 444 6.72e-50 178
MS.gene68939.t1 AT5G58090 27.828 442 293 14 40 467 17 446 5.57e-49 176
MS.gene68939.t1 AT5G20340 34.056 323 198 8 45 364 43 353 1.40e-48 172
MS.gene68939.t1 AT5G20330 33.746 323 199 8 45 364 34 344 1.58e-48 171
MS.gene68939.t1 AT3G57240 33.333 321 198 8 45 365 35 339 1.59e-48 171
MS.gene68939.t1 AT5G20390 34.084 311 193 6 45 354 33 332 3.72e-48 170
MS.gene68939.t1 AT3G55780 35.314 303 187 7 71 370 61 357 4.43e-48 171
MS.gene68939.t1 AT3G04010 28.571 441 282 15 45 467 33 458 8.73e-47 170
MS.gene68939.t1 AT1G77780 31.250 320 207 6 44 362 23 330 1.81e-45 164
MS.gene68939.t1 AT1G33220 33.333 300 187 6 45 342 34 322 3.92e-45 162
MS.gene68939.t1 AT5G20560 30.769 299 197 5 45 342 34 323 4.42e-41 151
MS.gene68939.t1 AT1G77790 29.538 325 217 7 42 364 27 341 2.95e-38 143
MS.gene68939.t1 AT5G35740 50.538 93 45 1 375 466 23 115 1.69e-27 107
MS.gene68939.t1 AT2G30933 50.485 103 47 2 379 478 79 180 3.58e-27 109
MS.gene68939.t1 AT4G13600 53.409 88 40 1 382 469 61 147 1.11e-25 105
MS.gene68939.t1 AT2G04910 50.588 85 42 0 382 466 15 99 1.38e-25 101
MS.gene68939.t1 AT5G67460 51.765 85 41 0 382 466 293 377 5.04e-24 104
MS.gene68939.t1 AT4G05430 46.154 91 49 0 381 471 22 112 5.78e-24 98.2
MS.gene68939.t1 AT4G05430 46.154 91 49 0 381 471 47 137 9.46e-24 98.2
MS.gene68939.t1 AT1G29380 54.023 87 35 2 382 466 148 231 1.41e-23 101
MS.gene68939.t1 AT1G29380 54.023 87 35 2 382 466 148 231 1.60e-23 100
MS.gene68939.t1 AT5G61130 47.126 87 45 1 381 467 20 105 1.86e-23 98.6
MS.gene68939.t1 AT2G30933 52.439 82 38 1 379 460 79 159 4.59e-23 96.3
MS.gene68939.t1 AT2G30933 52.439 82 38 1 379 460 79 159 4.59e-23 96.3
MS.gene68939.t1 AT1G18650 44.565 92 50 1 378 469 17 107 1.46e-22 94.0
MS.gene68939.t1 AT1G18650 43.617 94 52 1 378 471 17 109 1.98e-22 95.1
MS.gene68939.t1 AT1G66870 33.582 134 71 2 333 466 22 137 3.68e-22 92.8
MS.gene68939.t1 AT5G67460 53.165 79 37 0 382 460 293 371 5.27e-22 98.2
MS.gene68939.t1 AT1G66870 35.965 114 62 1 353 466 8 110 5.82e-22 91.3
MS.gene68939.t1 AT2G04910 49.367 79 40 0 382 460 15 93 4.64e-21 89.4
MS.gene68939.t1 AT3G58100 38.947 95 58 0 380 474 39 133 6.77e-21 90.5
MS.gene68939.t1 AT1G09460 50.575 87 40 2 378 464 133 216 8.53e-21 94.0
MS.gene68939.t1 AT3G58100 38.947 95 58 0 380 474 115 209 1.18e-20 92.0
MS.gene68939.t1 AT1G29380 53.086 81 33 2 382 460 148 225 1.42e-20 91.3
MS.gene68939.t1 AT1G29380 53.086 81 33 2 382 460 148 225 1.42e-20 91.3
MS.gene68939.t1 AT4G05430 47.500 80 42 0 381 460 47 126 3.01e-20 87.0
MS.gene68939.t1 AT4G16165 35.965 114 62 1 353 466 8 110 5.74e-20 85.9
MS.gene68939.t1 AT1G66855 37.931 87 54 0 380 466 24 110 2.02e-19 84.3
MS.gene68939.t1 AT1G69295 46.512 86 44 2 378 463 17 100 5.41e-19 86.3
MS.gene68939.t1 AT5G63240 42.529 87 48 1 382 466 40 126 1.41e-18 82.4
MS.gene68939.t1 AT4G09462 41.573 89 51 1 378 466 25 112 2.30e-18 81.3
MS.gene68939.t1 AT5G63225 40.230 87 51 1 378 464 21 106 3.26e-18 80.9
MS.gene68939.t1 AT1G66852 39.080 87 52 1 380 466 24 109 3.46e-18 80.9
MS.gene68939.t1 AT1G69295 43.478 92 50 2 372 463 7 96 3.76e-18 84.0
MS.gene68939.t1 AT4G09465 40.449 89 52 1 378 466 27 114 6.13e-18 80.1
MS.gene68939.t1 AT5G08000 45.977 87 46 1 381 467 39 124 6.52e-18 83.2
MS.gene68939.t1 AT4G09467 40.449 89 52 1 378 466 27 114 6.89e-18 80.1
MS.gene68939.t1 AT4G09464 40.449 89 52 1 378 466 27 114 6.89e-18 80.1
MS.gene68939.t1 AT5G08000 45.556 90 48 1 378 467 17 105 9.47e-18 82.0
MS.gene68939.t1 AT1G79480 41.573 89 51 1 378 466 307 394 9.69e-18 85.9
MS.gene68939.t1 AT1G79480 41.573 89 51 1 378 466 306 393 1.08e-17 85.5
MS.gene68939.t1 AT5G63250 40.230 87 50 1 382 466 42 128 4.23e-17 78.2
MS.gene68939.t1 AT5G53610 39.326 89 52 1 378 466 24 110 1.19e-16 76.3
MS.gene68939.t1 AT2G43670 37.079 89 54 1 376 464 29 115 7.75e-16 74.3
MS.gene68939.t1 AT4G09466 38.202 89 54 1 378 466 27 114 8.10e-16 74.3
MS.gene68939.t1 AT5G53600 36.667 90 55 1 377 466 24 111 1.25e-15 73.6
MS.gene68939.t1 AT2G03505 39.759 83 49 1 378 460 17 98 2.37e-15 72.8
MS.gene68939.t1 AT2G03505 39.759 83 49 1 378 460 17 98 3.41e-15 73.9
MS.gene68939.t1 AT2G03505 39.759 83 49 1 378 460 17 98 3.41e-15 73.9
MS.gene68939.t1 AT2G03505 39.759 83 49 1 378 460 17 98 3.41e-15 73.9
MS.gene68939.t1 AT4G09090 36.471 85 53 1 382 466 31 114 7.21e-15 71.2
MS.gene68939.t1 AT1G13830 40.000 80 47 1 382 461 35 113 9.40e-15 73.9
MS.gene68939.t1 AT5G63230 37.079 89 55 1 378 466 22 109 1.04e-14 70.9
MS.gene68939.t1 AT1G13830 40.000 80 47 1 382 461 21 99 1.14e-14 73.2
MS.gene68939.t1 AT1G78520 32.110 109 72 1 358 466 8 114 1.46e-14 70.5
MS.gene68939.t1 AT2G43660 31.858 113 74 1 361 470 11 123 6.76e-14 68.9
MS.gene68939.t1 AT1G26450 41.558 77 43 2 378 454 17 91 7.29e-14 70.9
MS.gene68939.t1 AT2G29735 37.931 87 51 2 380 464 29 114 1.32e-12 65.1
MS.gene68939.t1 AT2G42930 46.970 66 33 2 396 461 54 117 2.39e-12 64.7
MS.gene68939.t1 AT2G43660 31.858 113 73 2 361 470 11 122 7.95e-12 62.8

Find 107 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAGCCTTCCCTTCTTTC+TGG 0.073281 8.2:+1765609 None:intergenic
ATTGCTAAAAGTTGATTATT+TGG 0.132265 8.2:+1766622 None:intergenic
TAGTACCAGACAAAGATTTA+AGG 0.200756 8.2:+1766668 None:intergenic
AATTATTTGCACCTCATAAA+AGG 0.219139 8.2:+1764109 None:intergenic
AATAAGCAACAACGTTTCTT+TGG 0.232693 8.2:+1766566 None:intergenic
CACCAGTTTCGGAGGCTAAT+TGG 0.236218 8.2:-1765886 MS.gene68939:CDS
TTCTGCATGAAAACATAATA+AGG 0.241332 8.2:+1766259 None:intergenic
GCATGGCTCTTAACATTATT+AGG 0.247506 8.2:+1765656 None:intergenic
GTTAACTGTATTTATCTTGA+TGG 0.253335 8.2:+1764182 None:intergenic
ATCAATATTTATTACCTTCC+AGG 0.272719 8.2:+1764400 None:intergenic
ACCAGTTTCGGAGGCTAATT+GGG 0.293156 8.2:-1765885 MS.gene68939:CDS
GTTGTTCTTGTTACTGAAAC+TGG 0.305945 8.2:-1766079 MS.gene68939:CDS
TTGCTAAAAGTTGATTATTT+GGG 0.314146 8.2:+1766623 None:intergenic
GTTTATTTGCTTCATGTGTC+TGG 0.323555 8.2:-1765836 MS.gene68939:CDS
TTGCTTCATGTGTCTGGAAT+TGG 0.332763 8.2:-1765830 MS.gene68939:CDS
ATTTCTTTACTAGGAGTAAC+AGG 0.333468 8.2:+1766199 None:intergenic
GTATAATGAAGCAAAGTATT+AGG 0.335193 8.2:+1766169 None:intergenic
GAACAAAGGTGTTGTTCCTT+TGG 0.335719 8.2:-1766239 MS.gene68939:CDS
CTCGTCACCGACGGAGATTC+CGG 0.346085 8.2:+1766525 None:intergenic
AAAACACTAGAAGTAGTTTC+AGG 0.346605 8.2:+1765944 None:intergenic
GTTGGATTGGGCGTGTGGAC+CGG 0.349653 8.2:-1765726 MS.gene68939:CDS
TTGGATTGGGCGTGTGGACC+GGG 0.354336 8.2:-1765725 MS.gene68939:CDS
TTTGAGGTCTCCACCAGTTT+CGG 0.366293 8.2:-1765897 MS.gene68939:CDS
AGTAACATTAAGATTCTTCA+TGG 0.366407 8.2:+1766108 None:intergenic
ATTGCAGGCTGCGTTGGATT+GGG 0.368596 8.2:-1765738 MS.gene68939:CDS
CAAACACAACAGCAGCTTCA+TGG 0.368886 8.2:-1766591 MS.gene68939:CDS
GGATCCACCATTTCTTTACT+AGG 0.370594 8.2:+1766190 None:intergenic
TTCCTCTCCATTTCCACTCC+AGG 0.384069 8.2:-1766956 MS.gene68939:intron
CATTGCAGGCTGCGTTGGAT+TGG 0.386054 8.2:-1765739 MS.gene68939:CDS
CCCCAATTAGCCTCCGAAAC+TGG 0.387785 8.2:+1765884 None:intergenic
GACAAAGATTTAAGGATGTC+TGG 0.389969 8.2:+1766676 None:intergenic
CACGGGAGCTGTGAATTTCC+TGG 0.394429 8.2:-1764418 MS.gene68939:CDS
TCTTTAGAATCACCCTTACT+AGG 0.396789 8.2:+1766052 None:intergenic
TGAAACTGGTTGGCCTAGTA+AGG 0.399770 8.2:-1766065 MS.gene68939:CDS
GATTATACCTGGAGTGGAAA+TGG 0.405316 8.2:+1766949 None:intergenic
CAGAAAGAAGGGAAGGCTCC+TGG 0.417886 8.2:-1765608 MS.gene68939:CDS
TTTGAAAGAAACTGAAGAAT+AGG 0.421559 8.2:+1766313 None:intergenic
GATAGCTATTACCAGAAAGA+AGG 0.426213 8.2:-1765620 MS.gene68939:CDS
TAAAGAGCCTTATGCTACTA+AGG 0.434455 8.2:-1766035 MS.gene68939:CDS
ATGTCTCCCCGCATTGTTGT+TGG 0.434537 8.2:-1764133 MS.gene68939:CDS
TCTACTCACACAAGCAGTGC+TGG 0.436422 8.2:-1764225 MS.gene68939:CDS
GAAGAACAGACACAAGGGTT+TGG 0.445231 8.2:+1766338 None:intergenic
GACATCCTTAAATCTTTGTC+TGG 0.452797 8.2:-1766673 MS.gene68939:CDS
GAAGACATTGCAGGCTGCGT+TGG 0.457589 8.2:-1765744 MS.gene68939:CDS
TTGGGCGTGTGGACCGGGGA+GGG 0.460760 8.2:-1765720 MS.gene68939:CDS
AAAGCTTGAGAAGGTGGAAA+AGG 0.468839 8.2:+1766367 None:intergenic
GGCTTGTAGCAACTCTCTCC+AGG 0.474324 8.2:+1765677 None:intergenic
TCCTCTTCTTCTACCTGCTA+TGG 0.475155 8.2:-1766476 MS.gene68939:CDS
CCATTCATTGGTGTTAACAT+TGG 0.477053 8.2:-1766790 MS.gene68939:CDS
GAAAATGAAGAACAAGAAAG+AGG 0.477626 8.2:-1766814 MS.gene68939:CDS
ATTGGGCGTGTGGACCGGGG+AGG 0.479462 8.2:-1765721 MS.gene68939:CDS
TGTTACTCCTAGTAAAGAAA+TGG 0.482625 8.2:-1766197 MS.gene68939:CDS
CAAGAAAGAGGACCATTCAT+TGG 0.489949 8.2:-1766802 MS.gene68939:CDS
GCATTATCCTTAGTAGCATA+AGG 0.490331 8.2:+1766028 None:intergenic
GCAGTGCTGGGGAGAAGTTA+AGG 0.490725 8.2:-1764212 MS.gene68939:CDS
TTCCGGTGATTAATGTTTGA+GGG 0.494760 8.2:+1766542 None:intergenic
ATTCCGGTGATTAATGTTTG+AGG 0.505322 8.2:+1766541 None:intergenic
CTACTCACACAAGCAGTGCT+GGG 0.507943 8.2:-1764224 MS.gene68939:CDS
GAGGAAGGAAAATGAGAGGA+TGG 0.511501 8.2:+1766973 None:intergenic
TTCTTGTTACTGAAACTGGT+TGG 0.520012 8.2:-1766075 MS.gene68939:CDS
AAAAGGACCAACAACAATGC+GGG 0.532278 8.2:+1764126 None:intergenic
AGAAGAAGAGGAGCAGAAGA+AGG 0.533656 8.2:+1766487 None:intergenic
GAAGTAGTTTCAGGATTCAA+AGG 0.538932 8.2:+1765953 None:intergenic
TACCCTCAAACATTAATCAC+CGG 0.539504 8.2:-1766544 MS.gene68939:CDS
TGGAACAGACGTTGAAAACA+TGG 0.540554 8.2:-1766770 MS.gene68939:CDS
AGAAAGAAGGGAAGGCTCCT+GGG 0.543759 8.2:-1765607 MS.gene68939:CDS
GCTGCGTTGGATTGGGCGTG+TGG 0.545065 8.2:-1765731 MS.gene68939:CDS
TCCATAGCAGGTAGAAGAAG+AGG 0.546292 8.2:+1766475 None:intergenic
TTGTAAAGAGACTCCATAGC+AGG 0.547474 8.2:+1766463 None:intergenic
GGAATACCTTTGCAGGTCAC+GGG 0.548366 8.2:-1764435 MS.gene68939:intron
ACGTACTGCATTGCGATGGA+TGG 0.552902 8.2:-1765776 MS.gene68939:CDS
ATGAGAGGATGGAAAAGAGA+AGG 0.553329 8.2:+1766984 None:intergenic
AATTGTTCAGAGATTCAACC+TGG 0.556815 8.2:-1765695 MS.gene68939:CDS
GGATAAAGATTCATCATCAA+AGG 0.557537 8.2:+1766280 None:intergenic
ATAGCTATTACCAGAAAGAA+GGG 0.560758 8.2:-1765619 MS.gene68939:CDS
TGGAGAGGAAGGAAAATGAG+AGG 0.560979 8.2:+1766969 None:intergenic
CCTTTGAAATCACAGCTCCC+AGG 0.562281 8.2:+1765590 None:intergenic
CCAGTTTCGGAGGCTAATTG+GGG 0.563743 8.2:-1765884 MS.gene68939:CDS
TTGATTGATTATACCTGGAG+TGG 0.569597 8.2:+1766943 None:intergenic
CGGAATCTCCGTCGGTGACG+AGG 0.571434 8.2:-1766524 MS.gene68939:CDS
TGGAGTGGAAATGGAGAGGA+AGG 0.571840 8.2:+1766958 None:intergenic
CCTGGGAGCTGTGATTTCAA+AGG 0.573205 8.2:-1765590 MS.gene68939:CDS
TATCAAAAGCATAAGAAGCA+TGG 0.573291 8.2:+1765639 None:intergenic
TACTCCTAGTAAAGAAATGG+TGG 0.581925 8.2:-1766194 MS.gene68939:CDS
CCAATGTTAACACCAATGAA+TGG 0.582929 8.2:+1766790 None:intergenic
AGGAGCAGAAGAAGGAACAG+TGG 0.586211 8.2:+1766495 None:intergenic
TGGATTGGGCGTGTGGACCG+GGG 0.589282 8.2:-1765724 MS.gene68939:CDS
AAGCAACAAGACAAAGGAAG+TGG 0.589638 8.2:-1764253 MS.gene68939:CDS
GAAACTGGTTGGCCTAGTAA+GGG 0.590428 8.2:-1766064 MS.gene68939:CDS
TCTGAACAATTAGCCCTCCC+CGG 0.594471 8.2:+1765707 None:intergenic
GAGGTCTCCACCAGTTTCGG+AGG 0.600438 8.2:-1765894 MS.gene68939:CDS
CAATTAGCCTCCGAAACTGG+TGG 0.601892 8.2:+1765887 None:intergenic
CTATTACCAGAAAGAAGGGA+AGG 0.620079 8.2:-1765615 MS.gene68939:CDS
TACTCACACAAGCAGTGCTG+GGG 0.632654 8.2:-1764223 MS.gene68939:CDS
GAATGTAAGCAACAAGACAA+AGG 0.641001 8.2:-1764259 MS.gene68939:CDS
TCAGACGTACTGCATTGCGA+TGG 0.641902 8.2:-1765780 MS.gene68939:CDS
TACCTGGAGTGGAAATGGAG+AGG 0.644213 8.2:+1766954 None:intergenic
GGTGAGAACCTCGTCACCGA+CGG 0.644463 8.2:+1766516 None:intergenic
AGAATAACAGAAGCAGCATG+AGG 0.644610 8.2:+1766394 None:intergenic
TAAGCACTTACTGGGATCTG+TGG 0.657745 8.2:+1765550 None:intergenic
TAGGAAGAAGAACAGACACA+AGG 0.659038 8.2:+1766332 None:intergenic
GGAGCTGTGAATTTCCTGGA+AGG 0.663981 8.2:-1764414 MS.gene68939:intron
CAGTTTCGGAGGCTAATTGG+GGG 0.670003 8.2:-1765883 MS.gene68939:CDS
AGGAAGAAGAACAGACACAA+GGG 0.673536 8.2:+1766333 None:intergenic
AAAGGACCAACAACAATGCG+GGG 0.677073 8.2:+1764127 None:intergenic
TAAAAGGACCAACAACAATG+CGG 0.682023 8.2:+1764125 None:intergenic
TTAATCACCGGAATCTCCGT+CGG 0.695649 8.2:-1766532 MS.gene68939:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGATGATTAT+TGG + chr8.2:1764261-1764280 None:intergenic 10.0%
!! AATAAAAACATACAAAATTG+TGG + chr8.2:1766597-1766616 None:intergenic 15.0%
!!! ATATAATATTTTTGTTTTCG+TGG - chr8.2:1766671-1766690 MS.gene68939:CDS 15.0%
!!! TATAATATTTTTGTTTTCGT+GGG - chr8.2:1766672-1766691 MS.gene68939:CDS 15.0%
!! AAAAGAGTTAATTCTTCTTT+AGG + chr8.2:1765916-1765935 None:intergenic 20.0%
!! AAGCAAGAAAATTATAGATT+TGG + chr8.2:1766495-1766514 None:intergenic 20.0%
!! TTAAGCATAATAAAACAAGA+GGG + chr8.2:1766766-1766785 None:intergenic 20.0%
!! TTTAAGCATAATAAAACAAG+AGG + chr8.2:1766767-1766786 None:intergenic 20.0%
!!! AACAATCTATAAAGTATTTG+GGG + chr8.2:1766554-1766573 None:intergenic 20.0%
!!! AATAATCAACTTTTAGCAAT+TGG - chr8.2:1764510-1764529 MS.gene68939:intron 20.0%
!!! ATAATATTTTTGTTTTCGTG+GGG - chr8.2:1766673-1766692 MS.gene68939:CDS 20.0%
!!! ATCATCTTTTTTTTTTTTGC+AGG - chr8.2:1764264-1764283 MS.gene68939:CDS 20.0%
!!! ATTGCTAAAAGTTGATTATT+TGG + chr8.2:1764510-1764529 None:intergenic 20.0%
!!! CAACAATCTATAAAGTATTT+GGG + chr8.2:1766555-1766574 None:intergenic 20.0%
!!! CATGTAAATAAAAGTCTTTT+GGG + chr8.2:1765764-1765783 None:intergenic 20.0%
!!! CTTCATTTTCTTGTTTTATT+TGG + chr8.2:1764305-1764324 None:intergenic 20.0%
!!! TCATGTAAATAAAAGTCTTT+TGG + chr8.2:1765765-1765784 None:intergenic 20.0%
!!! TGATACATTTTGGTAAATTT+GGG - chr8.2:1765682-1765701 MS.gene68939:CDS 20.0%
!!! TTGATACATTTTGGTAAATT+TGG - chr8.2:1765681-1765700 MS.gene68939:CDS 20.0%
!!! TTGCTAAAAGTTGATTATTT+GGG + chr8.2:1764509-1764528 None:intergenic 20.0%
! AAATTATTGTAAGCACTTAC+TGG + chr8.2:1765591-1765610 None:intergenic 25.0%
! AATTATTGTAAGCACTTACT+GGG + chr8.2:1765590-1765609 None:intergenic 25.0%
! ACTATTCAATCAAGATTGAA+CGG + chr8.2:1766444-1766463 None:intergenic 25.0%
! ACTTTACTGATGATTTGAAA+AGG - chr8.2:1765970-1765989 MS.gene68939:CDS 25.0%
! AGTAACATTAAGATTCTTCA+TGG + chr8.2:1765024-1765043 None:intergenic 25.0%
! ATCAATATTTATTACCTTCC+AGG + chr8.2:1766732-1766751 None:intergenic 25.0%
! ATTGTTTGATTGATTATACC+TGG + chr8.2:1764194-1764213 None:intergenic 25.0%
! CATTTCATATTGACAAAATG+TGG - chr8.2:1765619-1765638 MS.gene68939:CDS 25.0%
! CTTTACTGATGATTTGAAAA+GGG - chr8.2:1765971-1765990 MS.gene68939:CDS 25.0%
! GTTAACTGTATTTATCTTGA+TGG + chr8.2:1766950-1766969 None:intergenic 25.0%
! TACTTTATAGATTGTTGCAT+AGG - chr8.2:1766558-1766577 MS.gene68939:CDS 25.0%
! TTAAAAGTAGAACTATGACT+AGG - chr8.2:1766002-1766021 MS.gene68939:CDS 25.0%
! TTCTGCATGAAAACATAATA+AGG + chr8.2:1764873-1764892 None:intergenic 25.0%
! TTTGAAAGAAACTGAAGAAT+AGG + chr8.2:1764819-1764838 None:intergenic 25.0%
!! AGCTTTTTAATGAAGATTTG+AGG - chr8.2:1765216-1765235 MS.gene68939:intron 25.0%
!! CACATTTTGTCAATATGAAA+TGG + chr8.2:1765621-1765640 None:intergenic 25.0%
!! GCAACAATCTATAAAGTATT+TGG + chr8.2:1766556-1766575 None:intergenic 25.0%
!! GTATAATGAAGCAAAGTATT+AGG + chr8.2:1764963-1764982 None:intergenic 25.0%
!! GTGAAATTTGAAATGAAAAG+AGG - chr8.2:1766126-1766145 MS.gene68939:CDS 25.0%
!! TGTTGCTAATTGATACATTT+TGG - chr8.2:1765672-1765691 MS.gene68939:CDS 25.0%
!!! AAAATTTCTAAGACATGTGA+AGG + chr8.2:1766269-1766288 None:intergenic 25.0%
!!! ACTCTTTTGAGAGTAATAAA+AGG - chr8.2:1765928-1765947 MS.gene68939:CDS 25.0%
!!! AGACTTTTATTTACATGATG+TGG - chr8.2:1765767-1765786 MS.gene68939:CDS 25.0%
!!! GACTTTTATTTACATGATGT+GGG - chr8.2:1765768-1765787 MS.gene68939:CDS 25.0%
!!! GTCTTAGAAATTTTTGAAAC+TGG - chr8.2:1766275-1766294 MS.gene68939:CDS 25.0%
!!! TAAATAAAAGTCTTTTGGGT+TGG + chr8.2:1765760-1765779 None:intergenic 25.0%
AAAACACTAGAAGTAGTTTC+AGG + chr8.2:1765188-1765207 None:intergenic 30.0%
AAATGAAATGCATTTGTGTG+TGG - chr8.2:1766052-1766071 MS.gene68939:CDS 30.0%
AATAAAACAAGAGGGTAAGT+TGG + chr8.2:1766758-1766777 None:intergenic 30.0%
AATAAGCAACAACGTTTCTT+TGG + chr8.2:1764566-1764585 None:intergenic 30.0%
AATCAAGTCCAATTTGTGTT+AGG + chr8.2:1765797-1765816 None:intergenic 30.0%
ACTGTCAAGAAAAACAAACA+GGG + chr8.2:1766215-1766234 None:intergenic 30.0%
ATAGCTATTACCAGAAAGAA+GGG - chr8.2:1765510-1765529 MS.gene68939:intron 30.0%
ATTGTTGCATAGGTGTAAAA+TGG - chr8.2:1766568-1766587 MS.gene68939:CDS 30.0%
ATTTCTTTACTAGGAGTAAC+AGG + chr8.2:1764933-1764952 None:intergenic 30.0%
GAAAATGAAGAACAAGAAAG+AGG - chr8.2:1764315-1764334 MS.gene68939:intron 30.0%
GACCATAAAGTACGTTAATT+AGG + chr8.2:1765894-1765913 None:intergenic 30.0%
GGATAAAGATTCATCATCAA+AGG + chr8.2:1764852-1764871 None:intergenic 30.0%
TACTGTCAAGAAAAACAAAC+AGG + chr8.2:1766216-1766235 None:intergenic 30.0%
TAGTACCAGACAAAGATTTA+AGG + chr8.2:1764464-1764483 None:intergenic 30.0%
TGCCTAATTAACGTACTTTA+TGG - chr8.2:1765889-1765908 MS.gene68939:CDS 30.0%
TGTCAATATGAAATGGCATA+AGG + chr8.2:1765614-1765633 None:intergenic 30.0%
TGTTACTCCTAGTAAAGAAA+TGG - chr8.2:1764932-1764951 MS.gene68939:intron 30.0%
TTGTTGCATAGGTGTAAAAT+GGG - chr8.2:1766569-1766588 MS.gene68939:CDS 30.0%
! CTAAAAAGTGCATTATCCAA+AGG + chr8.2:1764909-1764928 None:intergenic 30.0%
! TATCAAAAGCATAAGAAGCA+TGG + chr8.2:1765493-1765512 None:intergenic 30.0%
! TATGTTTTCATGCAGAACAA+AGG - chr8.2:1764876-1764895 MS.gene68939:intron 30.0%
! TTTGGGATTTCAATTCAATG+TGG - chr8.2:1765699-1765718 MS.gene68939:CDS 30.0%
!! AAGCATGTTTTTGATCATAG+TGG - chr8.2:1765149-1765168 MS.gene68939:intron 30.0%
!!! GCTTTTTTATGGGAATATGT+CGG - chr8.2:1765268-1765287 MS.gene68939:intron 30.0%
AACTGTTCAGATTTCAAGCT+CGG - chr8.2:1766372-1766391 MS.gene68939:CDS 35.0%
AATTGTTCAGAGATTCAACC+TGG - chr8.2:1765434-1765453 MS.gene68939:intron 35.0%
ATTCCGGTGATTAATGTTTG+AGG + chr8.2:1764591-1764610 None:intergenic 35.0%
CAAACAAAAAGCAGCAATGT+TGG + chr8.2:1765834-1765853 None:intergenic 35.0%
CAATGTGGCATCAAATTGTT+AGG - chr8.2:1765714-1765733 MS.gene68939:CDS 35.0%
CCAATGTTAACACCAATGAA+TGG + chr8.2:1764342-1764361 None:intergenic 35.0%
CTGAACAGTTCAATCTTAGT+CGG + chr8.2:1766362-1766381 None:intergenic 35.0%
GAAGTAGTTTCAGGATTCAA+AGG + chr8.2:1765179-1765198 None:intergenic 35.0%
GAATGTAAGCAACAAGACAA+AGG - chr8.2:1766870-1766889 MS.gene68939:intron 35.0%
GACAAAGATTTAAGGATGTC+TGG + chr8.2:1764456-1764475 None:intergenic 35.0%
GACATCCTTAAATCTTTGTC+TGG - chr8.2:1764456-1764475 MS.gene68939:intron 35.0%
GATAGCTATTACCAGAAAGA+AGG - chr8.2:1765509-1765528 MS.gene68939:intron 35.0%
GCATGGCTCTTAACATTATT+AGG + chr8.2:1765476-1765495 None:intergenic 35.0%
GCATTATCCTTAGTAGCATA+AGG + chr8.2:1765104-1765123 None:intergenic 35.0%
GGCAAAACAACATGAATTTG+AGG + chr8.2:1765873-1765892 None:intergenic 35.0%
GTGAAGGTAATCTACAAACA+TGG + chr8.2:1766253-1766272 None:intergenic 35.0%
GTTGTTCTTGTTACTGAAAC+TGG - chr8.2:1765050-1765069 MS.gene68939:intron 35.0%
GTTTATTTGCTTCATGTGTC+TGG - chr8.2:1765293-1765312 MS.gene68939:intron 35.0%
TAAAAGGACCAACAACAATG+CGG + chr8.2:1767007-1767026 None:intergenic 35.0%
TACCCTCAAACATTAATCAC+CGG - chr8.2:1764585-1764604 MS.gene68939:intron 35.0%
TACTCCTAGTAAAGAAATGG+TGG - chr8.2:1764935-1764954 MS.gene68939:intron 35.0%
TGGTTGAAAAAAGCTTGAGA+AGG + chr8.2:1764774-1764793 None:intergenic 35.0%
TTCCGGTGATTAATGTTTGA+GGG + chr8.2:1764590-1764609 None:intergenic 35.0%
TTCCTGAAATAGACACAACA+AGG + chr8.2:1766625-1766644 None:intergenic 35.0%
TTCTTGTTACTGAAACTGGT+TGG - chr8.2:1765054-1765073 MS.gene68939:intron 35.0%
TTGAAAAAAGCTTGAGAAGG+TGG + chr8.2:1764771-1764790 None:intergenic 35.0%
TTGATTGAATAGTCGAGATG+TGG - chr8.2:1766451-1766470 MS.gene68939:CDS 35.0%
TTGATTGATTATACCTGGAG+TGG + chr8.2:1764189-1764208 None:intergenic 35.0%
TTGTTTGATGTGGCTATTCT+GGG - chr8.2:1765847-1765866 MS.gene68939:CDS 35.0%
TTTGTTTGATGTGGCTATTC+TGG - chr8.2:1765846-1765865 MS.gene68939:CDS 35.0%
! TAAAGAGCCTTATGCTACTA+AGG - chr8.2:1765094-1765113 MS.gene68939:intron 35.0%
! TTCCTTGTTGTGTCTATTTC+AGG - chr8.2:1766620-1766639 MS.gene68939:CDS 35.0%
! TTTTTATGGGAATATGTCGG+CGG - chr8.2:1765271-1765290 MS.gene68939:intron 35.0%
!! CCATTCATTGGTGTTAACAT+TGG - chr8.2:1764339-1764358 MS.gene68939:intron 35.0%
!! CTGCAAAGGAACTTTTGATT+TGG - chr8.2:1766086-1766105 MS.gene68939:CDS 35.0%
!! TCTTTAGAATCACCCTTACT+AGG + chr8.2:1765080-1765099 None:intergenic 35.0%
!! TTTTGATTCGAAGACATTGC+AGG - chr8.2:1765376-1765395 MS.gene68939:intron 35.0%
!!! CTAATTGGGGGCTTTTTTAT+GGG - chr8.2:1765258-1765277 MS.gene68939:intron 35.0%
!!! GTCTGGAATTGGAACTTTTT+TGG - chr8.2:1765310-1765329 MS.gene68939:intron 35.0%
!!! TTGCTGCTTTTTGTTTGATG+TGG - chr8.2:1765837-1765856 MS.gene68939:CDS 35.0%
AAAAGGACCAACAACAATGC+GGG + chr8.2:1767006-1767025 None:intergenic 40.0%
AAAAGTTCCTTTGCAGTGTG+TGG + chr8.2:1766082-1766101 None:intergenic 40.0%
AAAGCTTGAGAAGGTGGAAA+AGG + chr8.2:1764765-1764784 None:intergenic 40.0%
AAAGTTCCTTTGCAGTGTGT+GGG + chr8.2:1766081-1766100 None:intergenic 40.0%
AAGCAACAAGACAAAGGAAG+TGG - chr8.2:1766876-1766895 MS.gene68939:intron 40.0%
ACAAACCAACATCCAACTCA+TGG + chr8.2:1766183-1766202 None:intergenic 40.0%
ACAGTTCAATCTTAGTCGGA+CGG + chr8.2:1766358-1766377 None:intergenic 40.0%
AGAATAACAGAAGCAGCATG+AGG + chr8.2:1764738-1764757 None:intergenic 40.0%
AGGAAGAAGAACAGACACAA+GGG + chr8.2:1764799-1764818 None:intergenic 40.0%
ATGAGAGGATGGAAAAGAGA+AGG + chr8.2:1764148-1764167 None:intergenic 40.0%
CAAGAAAGAGGACCATTCAT+TGG - chr8.2:1764327-1764346 MS.gene68939:intron 40.0%
CTATTACCAGAAAGAAGGGA+AGG - chr8.2:1765514-1765533 MS.gene68939:intron 40.0%
CTTGACAGTAGCAAAGATTC+TGG - chr8.2:1766226-1766245 MS.gene68939:CDS 40.0%
GATTATACCTGGAGTGGAAA+TGG + chr8.2:1764183-1764202 None:intergenic 40.0%
GGATCCACCATTTCTTTACT+AGG + chr8.2:1764942-1764961 None:intergenic 40.0%
TAGGAAGAAGAACAGACACA+AGG + chr8.2:1764800-1764819 None:intergenic 40.0%
TGGAACAGACGTTGAAAACA+TGG - chr8.2:1764359-1764378 MS.gene68939:intron 40.0%
TTGTAAAGAGACTCCATAGC+AGG + chr8.2:1764669-1764688 None:intergenic 40.0%
! TTGCTTCATGTGTCTGGAAT+TGG - chr8.2:1765299-1765318 MS.gene68939:intron 40.0%
!! GAACAAAGGTGTTGTTCCTT+TGG - chr8.2:1764890-1764909 MS.gene68939:intron 40.0%
!!! GCTAATTGGGGGCTTTTTTA+TGG - chr8.2:1765257-1765276 MS.gene68939:intron 40.0%
AAAGGACCAACAACAATGCG+GGG + chr8.2:1767005-1767024 None:intergenic 45.0%
AACATCCAACTCATGGAGAG+TGG + chr8.2:1766176-1766195 None:intergenic 45.0%
AAGTTCCTTTGCAGTGTGTG+GGG + chr8.2:1766080-1766099 None:intergenic 45.0%
ACATCCAACTCATGGAGAGT+GGG + chr8.2:1766175-1766194 None:intergenic 45.0%
ACCAGTTTCGGAGGCTAATT+GGG - chr8.2:1765244-1765263 MS.gene68939:intron 45.0%
AGAAGAAGAGGAGCAGAAGA+AGG + chr8.2:1764645-1764664 None:intergenic 45.0%
CAAACACAACAGCAGCTTCA+TGG - chr8.2:1764538-1764557 MS.gene68939:intron 45.0%
CTTGATTGCGTCCAACCAAA+CGG + chr8.2:1766320-1766339 None:intergenic 45.0%
GAAGAACAGACACAAGGGTT+TGG + chr8.2:1764794-1764813 None:intergenic 45.0%
GAGGAAGGAAAATGAGAGGA+TGG + chr8.2:1764159-1764178 None:intergenic 45.0%
GGAAACTGTAGTAGTAGCAC+TGG - chr8.2:1766147-1766166 MS.gene68939:CDS 45.0%
GTGGGACTCCTAACACAAAT+TGG - chr8.2:1765786-1765805 MS.gene68939:CDS 45.0%
TAAGCACTTACTGGGATCTG+TGG + chr8.2:1765582-1765601 None:intergenic 45.0%
TCCATAGCAGGTAGAAGAAG+AGG + chr8.2:1764657-1764676 None:intergenic 45.0%
TCCTCTTCTTCTACCTGCTA+TGG - chr8.2:1764653-1764672 MS.gene68939:intron 45.0%
TGGAGAGGAAGGAAAATGAG+AGG + chr8.2:1764163-1764182 None:intergenic 45.0%
TTAATCACCGGAATCTCCGT+CGG - chr8.2:1764597-1764616 MS.gene68939:intron 45.0%
TTGATTGCGTCCAACCAAAC+GGG + chr8.2:1766319-1766338 None:intergenic 45.0%
! ACTCTCCATGAGTTGGATGT+TGG - chr8.2:1766175-1766194 MS.gene68939:CDS 45.0%
! TTTGAGGTCTCCACCAGTTT+CGG - chr8.2:1765232-1765251 MS.gene68939:intron 45.0%
!! GAAACTGGTTGGCCTAGTAA+GGG - chr8.2:1765065-1765084 MS.gene68939:intron 45.0%
!! TGAAACTGGTTGGCCTAGTA+AGG - chr8.2:1765064-1765083 MS.gene68939:intron 45.0%
ACGTACTGCATTGCGATGGA+TGG - chr8.2:1765353-1765372 MS.gene68939:intron 50.0%
AGAAAGAAGGGAAGGCTCCT+GGG - chr8.2:1765522-1765541 MS.gene68939:intron 50.0%
AGGAGCAGAAGAAGGAACAG+TGG + chr8.2:1764637-1764656 None:intergenic 50.0%
ATGTCTCCCCGCATTGTTGT+TGG - chr8.2:1766996-1767015 MS.gene68939:CDS 50.0%
ATTGCAGGCTGCGTTGGATT+GGG - chr8.2:1765391-1765410 MS.gene68939:intron 50.0%
CACCAGTTTCGGAGGCTAAT+TGG - chr8.2:1765243-1765262 MS.gene68939:intron 50.0%
CAGTTTCGGAGGCTAATTGG+GGG - chr8.2:1765246-1765265 MS.gene68939:intron 50.0%
CCAGTTTCGGAGGCTAATTG+GGG - chr8.2:1765245-1765264 MS.gene68939:intron 50.0%
CCTGGGAGCTGTGATTTCAA+AGG - chr8.2:1765539-1765558 MS.gene68939:intron 50.0%
CTACTCACACAAGCAGTGCT+GGG - chr8.2:1766905-1766924 MS.gene68939:intron 50.0%
GGAATACCTTTGCAGGTCAC+GGG - chr8.2:1766694-1766713 MS.gene68939:CDS 50.0%
GGAGCTGTGAATTTCCTGGA+AGG - chr8.2:1766715-1766734 MS.gene68939:CDS 50.0%
GGGAATACCTTTGCAGGTCA+CGG - chr8.2:1766693-1766712 MS.gene68939:CDS 50.0%
TACCTGGAGTGGAAATGGAG+AGG + chr8.2:1764178-1764197 None:intergenic 50.0%
TACTCACACAAGCAGTGCTG+GGG - chr8.2:1766906-1766925 MS.gene68939:intron 50.0%
TCAGACGTACTGCATTGCGA+TGG - chr8.2:1765349-1765368 MS.gene68939:intron 50.0%
TCTACTCACACAAGCAGTGC+TGG - chr8.2:1766904-1766923 MS.gene68939:intron 50.0%
TCTGAACAATTAGCCCTCCC+CGG + chr8.2:1765425-1765444 None:intergenic 50.0%
TGATTGCGTCCAACCAAACG+GGG + chr8.2:1766318-1766337 None:intergenic 50.0%
TGGAGTGGAAATGGAGAGGA+AGG + chr8.2:1764174-1764193 None:intergenic 50.0%
TTCCTCTCCATTTCCACTCC+AGG - chr8.2:1764173-1764192 MS.gene68939:CDS 50.0%
TTCGTGGGGAATACCTTTGC+AGG - chr8.2:1766687-1766706 MS.gene68939:CDS 50.0%
! CAATTAGCCTCCGAAACTGG+TGG + chr8.2:1765245-1765264 None:intergenic 50.0%
!! CCTTTGAAATCACAGCTCCC+AGG + chr8.2:1765542-1765561 None:intergenic 50.0%
!! TTGGGTTGGACTCTTCTCGT+GGG + chr8.2:1765746-1765765 None:intergenic 50.0%
!! TTTGGGTTGGACTCTTCTCG+TGG + chr8.2:1765747-1765766 None:intergenic 50.0%
CACGGGAGCTGTGAATTTCC+TGG - chr8.2:1766711-1766730 MS.gene68939:CDS 55.0%
CAGAAAGAAGGGAAGGCTCC+TGG - chr8.2:1765521-1765540 MS.gene68939:intron 55.0%
CAGGAGCCTTCCCTTCTTTC+TGG + chr8.2:1765523-1765542 None:intergenic 55.0%
CATTGCAGGCTGCGTTGGAT+TGG - chr8.2:1765390-1765409 MS.gene68939:intron 55.0%
CTGTCACAACCCCGTTTGGT+TGG - chr8.2:1766306-1766325 MS.gene68939:CDS 55.0%
GAAGACATTGCAGGCTGCGT+TGG - chr8.2:1765385-1765404 MS.gene68939:intron 55.0%
GGCTTGTAGCAACTCTCTCC+AGG + chr8.2:1765455-1765474 None:intergenic 55.0%
TGGAACCCCACACACTGCAA+AGG - chr8.2:1766072-1766091 MS.gene68939:CDS 55.0%
TGTGCTGTCACAACCCCGTT+TGG - chr8.2:1766302-1766321 MS.gene68939:CDS 55.0%
TTAGTCGGACGGTCGAGAAG+TGG + chr8.2:1766347-1766366 None:intergenic 55.0%
! CCCCAATTAGCCTCCGAAAC+TGG + chr8.2:1765248-1765267 None:intergenic 55.0%
! GCAGTGCTGGGGAGAAGTTA+AGG - chr8.2:1766917-1766936 MS.gene68939:intron 55.0%
ACAGCTCCCGTGACCTGCAA+AGG + chr8.2:1766703-1766722 None:intergenic 60.0%
CTCGTCACCGACGGAGATTC+CGG + chr8.2:1764607-1764626 None:intergenic 60.0%
GAGGTCTCCACCAGTTTCGG+AGG - chr8.2:1765235-1765254 MS.gene68939:intron 60.0%
GGCTCCCACTCTCCATGAGT+TGG - chr8.2:1766168-1766187 MS.gene68939:CDS 60.0%
GGTGAGAACCTCGTCACCGA+CGG + chr8.2:1764616-1764635 None:intergenic 60.0%
! GTTGGATTGGGCGTGTGGAC+CGG - chr8.2:1765403-1765422 MS.gene68939:intron 60.0%
! TTGGATTGGGCGTGTGGACC+GGG - chr8.2:1765404-1765423 MS.gene68939:intron 60.0%
CGGAATCTCCGTCGGTGACG+AGG - chr8.2:1764605-1764624 MS.gene68939:intron 65.0%
! GCTGCGTTGGATTGGGCGTG+TGG - chr8.2:1765398-1765417 MS.gene68939:intron 65.0%
! TGGATTGGGCGTGTGGACCG+GGG - chr8.2:1765405-1765424 MS.gene68939:intron 65.0%
ATTGGGCGTGTGGACCGGGG+AGG - chr8.2:1765408-1765427 MS.gene68939:intron 70.0%
TTGGGCGTGTGGACCGGGGA+GGG - chr8.2:1765409-1765428 MS.gene68939:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 1764122 1767029 1764122 ID=MS.gene68939
chr8.2 mRNA 1764122 1767029 1764122 ID=MS.gene68939.t1;Parent=MS.gene68939
chr8.2 exon 1766957 1767029 1766957 ID=MS.gene68939.t1.exon1;Parent=MS.gene68939.t1
chr8.2 CDS 1766957 1767029 1766957 ID=cds.MS.gene68939.t1;Parent=MS.gene68939.t1
chr8.2 exon 1765561 1766865 1765561 ID=MS.gene68939.t1.exon2;Parent=MS.gene68939.t1
chr8.2 CDS 1765561 1766865 1765561 ID=cds.MS.gene68939.t1;Parent=MS.gene68939.t1
chr8.2 exon 1764415 1764442 1764415 ID=MS.gene68939.t1.exon3;Parent=MS.gene68939.t1
chr8.2 CDS 1764415 1764442 1764415 ID=cds.MS.gene68939.t1;Parent=MS.gene68939.t1
chr8.2 exon 1764122 1764284 1764122 ID=MS.gene68939.t1.exon4;Parent=MS.gene68939.t1
chr8.2 CDS 1764122 1764284 1764122 ID=cds.MS.gene68939.t1;Parent=MS.gene68939.t1
Gene Sequence

>MS.gene68939

ATGGCAAATTCTAACTATCTCATCCTTCTCTTTTCCATCCTCTCATTTTCCTTCCTCTCCATTTCCACTCCAGGTATAATCAATCAAACAATTTTCTCTTCATTCATTCAATTCAACTTATTTTCTTTTTCTTGTTCCAATAATCATCTTTTTTTTTTTTGCAGGTGAAAGTTCACATTTCCAAATAAAACAAGAAAATGAAGAACAAGAAAGAGGACCATTCATTGGTGTTAACATTGGAACAGACGTTGAAAACATGGCATCAACTTCAGACATAGTTTCATTTCTGAAGTTACAAAAAATAACACATGTTCGTATCTATGATGCAAATCCAGACATCCTTAAATCTTTGTCTGGTACTAAAATTCGTGTCATCATTAGTGTCCCAAATAATCAACTTTTAGCAATTGGTTCTTCAAACACAACAGCAGCTTCATGGATCCAAAGAAACGTTGTTGCTTATTACCCTCAAACATTAATCACCGGAATCTCCGTCGGTGACGAGGTTCTCACCACTGTTCCTTCTTCTGCTCCTCTTCTTCTACCTGCTATGGAGTCTCTTTACAATGCTCTTGTTTCTTCAAATCTTCATCAACAAATCAAAGTTTCAACTCCTCATGCTGCTTCTGTTATTCTTGATCCTTTTCCACCTTCTCAAGCTTTTTTCAACCAAACCCTTGTGTCTGTTCTTCTTCCTATTCTTCAGTTTCTTTCAAAGACTGAATCTCCTTTGATGATGAATCTTTATCCTTATTATGTTTTCATGCAGAACAAAGGTGTTGTTCCTTTGGATAATGCACTTTTTAGACCTGTTACTCCTAGTAAAGAAATGGTGGATCCTAATACTTTGCTTCATTATACTAATGTTCTTGATGCAATGATTGATTCTGCTTATTTTTCCATGAAGAATCTTAATGTTACTGATGTTGTTGTTCTTGTTACTGAAACTGGTTGGCCTAGTAAGGGTGATTCTAAAGAGCCTTATGCTACTAAGGATAATGCTGATACTTATAATTCTAATTTGATTAAGCATGTTTTTGATCATAGTGGAACACCTTTGAATCCTGAAACTACTTCTAGTGTTTTTATCTATGAGCTTTTTAATGAAGATTTGAGGTCTCCACCAGTTTCGGAGGCTAATTGGGGGCTTTTTTATGGGAATATGTCGGCGGTTTATTTGCTTCATGTGTCTGGAATTGGAACTTTTTTGGCGAATGATACGACGAATCAGACGTACTGCATTGCGATGGATGGTTTTGATTCGAAGACATTGCAGGCTGCGTTGGATTGGGCGTGTGGACCGGGGAGGGCTAATTGTTCAGAGATTCAACCTGGAGAGAGTTGCTACAAGCCTAATAATGTTAAGAGCCATGCTTCTTATGCTTTTGATAGCTATTACCAGAAAGAAGGGAAGGCTCCTGGGAGCTGTGATTTCAAAGGAGTTGCTATGATCACAACCACAGATCCCAGTAAGTGCTTACAATAATTTCCTTATGCCATTTCATATTGACAAAATGTGGAAGCTTGATGCATGATTAATTGAAATGTGTTGTTGCTAATTGATACATTTTGGTAAATTTGGGATTTCAATTCAATGTGGCATCAAATTGTTAGGACTTAGCCCACGAGAAGAGTCCAACCCAAAAGACTTTTATTTACATGATGTGGGACTCCTAACACAAATTGGACTTGATTTTTGAAAGAGAAGACCAACATTGCTGCTTTTTGTTTGATGTGGCTATTCTGGGCCTCAAATTCATGTTGTTTTGCCTAATTAACGTACTTTATGGTCCTAAAGAAGAATTAACTCTTTTGAGAGTAATAAAAGGCTTGTGACTACTGTAACAAACTTTACTGATGATTTGAAAAGGGTTAATAATTTAAAAGTAGAACTATGACTAGGTATTGCTATGTTATGTAATGATTCATGAAATGAAATGCATTTGTGTGTGGAACCCCACACACTGCAAAGGAACTTTTGATTTGGCTCTAGTCTTATTTTATGTGAAATTTGAAATGAAAAGAGGAAACTGTAGTAGTAGCACTGGCTCCCACTCTCCATGAGTTGGATGTTGGTTTGTCATAGAGCACCCTGTTTGTTTTTCTTGACAGTAGCAAAGATTCTGGACCATGTTTGTAGATTACCTTCACATGTCTTAGAAATTTTTGAAACTGGATTTTGTGCTGTCACAACCCCGTTTGGTTGGACGCAATCAAGTTAGCCACTTCTCGACCGTCCGACTAAGATTGAACTGTTCAGATTTCAAGCTCGGTATTTTATAATTAAAAAGAAAATCAAAATATGCATTGAAATCTAGACCGTTCAATCTTGATTGAATAGTCGAGATGTGGAGTCAAGCTGTACACAATCCAAATCTATAATTTTCTTGCTTTGCACTCTTTAGTACATTGTCTTGTATGTAAACTCACCCCAAATACTTTATAGATTGTTGCATAGGTGTAAAATGGGCTCCACAATTTTGTATGTTTTTATTCTTTTCCTTGTTGTGTCTATTTCAGGAATAAATAACACTTGTGATTGATATAATATATAATATTTTTGTTTTCGTGGGGAATACCTTTGCAGGTCACGGGAGCTGTGAATTTCCTGGAAGGTAATAAATATTGATCTGCCAACTTACCCTCTTGTTTTATTATGCTTAAAATGTGAATACTTGAATTTAATTTATTTAACAACTTGCATCTTTTATCTAAGTGTTAGTCTCATTTGATGTGATATTGCAGCAAGAATGTAAGCAACAAGACAAAGGAAGTGGTGAACTCTACTCACACAAGCAGTGCTGGGGAGAAGTTAAGGTTCAGAACCATCAAGATAAATACAGTTAACAATATTTTGCATATTTTCTTGACAACATGTCTCCCCGCATTGTTGTTGGTCCTTTTATGA

Protein sequence

>MS.gene68939.t1

MANSNYLILLFSILSFSFLSISTPGESSHFQIKQENEEQERGPFIGVNIGTDVENMASTSDIVSFLKLQKITHVRIYDANPDILKSLSGTKIRVIISVPNNQLLAIGSSNTTAASWIQRNVVAYYPQTLITGISVGDEVLTTVPSSAPLLLPAMESLYNALVSSNLHQQIKVSTPHAASVILDPFPPSQAFFNQTLVSVLLPILQFLSKTESPLMMNLYPYYVFMQNKGVVPLDNALFRPVTPSKEMVDPNTLLHYTNVLDAMIDSAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATKDNADTYNSNLIKHVFDHSGTPLNPETTSSVFIYELFNEDLRSPPVSEANWGLFYGNMSAVYLLHVSGIGTFLANDTTNQTYCIAMDGFDSKTLQAALDWACGPGRANCSEIQPGESCYKPNNVKSHASYAFDSYYQKEGKAPGSCDFKGVAMITTTDPSHGSCEFPGSKNVSNKTKEVVNSTHTSSAGEKLRFRTIKINTVNNILHIFLTTCLPALLLVLL