Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69188.t1 | XP_013462112.1 | 94 | 284 | 16 | 1 | 1 | 284 | 1 | 283 | 2.00E-119 | 438.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69188.t1 | Q9ZU65 | 63.9 | 61 | 22 | 0 | 204 | 264 | 231 | 291 | 4.4e-14 | 80.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69188.t1 | A0A072V2Q5 | 94.0 | 284 | 16 | 1 | 1 | 284 | 1 | 283 | 1.5e-119 | 438.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69188.t1 | TF | OFP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055942 | MS.gene69188 | 0.826682 | 2.37E-54 | -1.69E-46 |
| MS.gene058628 | MS.gene69188 | 0.804093 | 2.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69188.t1 | MTR_3g111780 | 94.718 | 284 | 14 | 1 | 1 | 284 | 1 | 283 | 0.0 | 501 |
| MS.gene69188.t1 | MTR_8g103520 | 50.000 | 72 | 36 | 0 | 193 | 264 | 218 | 289 | 5.16e-20 | 87.8 |
| MS.gene69188.t1 | MTR_0907s0020 | 52.941 | 68 | 32 | 0 | 197 | 264 | 100 | 167 | 8.28e-20 | 85.1 |
| MS.gene69188.t1 | MTR_5g075210 | 58.462 | 65 | 27 | 0 | 199 | 263 | 280 | 344 | 6.43e-19 | 85.9 |
| MS.gene69188.t1 | MTR_7g105790 | 53.623 | 69 | 32 | 0 | 202 | 270 | 113 | 181 | 5.47e-18 | 80.5 |
| MS.gene69188.t1 | MTR_7g072875 | 32.468 | 154 | 80 | 2 | 129 | 260 | 129 | 280 | 5.60e-18 | 82.4 |
| MS.gene69188.t1 | MTR_4g052040 | 53.846 | 65 | 30 | 0 | 200 | 264 | 100 | 164 | 1.82e-17 | 78.6 |
| MS.gene69188.t1 | MTR_5g079710 | 50.725 | 69 | 34 | 0 | 196 | 264 | 88 | 156 | 9.95e-17 | 78.2 |
| MS.gene69188.t1 | MTR_7g072630 | 26.829 | 287 | 155 | 8 | 27 | 260 | 58 | 342 | 1.09e-16 | 79.3 |
| MS.gene69188.t1 | MTR_8g087530 | 47.692 | 65 | 34 | 0 | 199 | 263 | 258 | 322 | 6.48e-16 | 77.0 |
| MS.gene69188.t1 | MTR_2g018030 | 46.774 | 62 | 33 | 0 | 199 | 260 | 277 | 338 | 9.80e-16 | 76.6 |
| MS.gene69188.t1 | MTR_4g028930 | 50.820 | 61 | 30 | 0 | 200 | 260 | 315 | 375 | 6.36e-15 | 74.3 |
| MS.gene69188.t1 | MTR_4g052060 | 51.667 | 60 | 29 | 0 | 205 | 264 | 99 | 158 | 1.91e-13 | 67.8 |
| MS.gene69188.t1 | MTR_1g111640 | 45.161 | 62 | 34 | 0 | 198 | 259 | 136 | 197 | 3.67e-11 | 62.4 |
| MS.gene69188.t1 | MTR_4g132740 | 37.500 | 88 | 44 | 1 | 178 | 265 | 71 | 147 | 5.82e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69188.t1 | AT5G19650 | 62.121 | 66 | 25 | 0 | 199 | 264 | 154 | 219 | 7.03e-23 | 94.4 |
| MS.gene69188.t1 | AT2G18500 | 61.538 | 65 | 25 | 0 | 199 | 263 | 226 | 290 | 2.81e-20 | 89.0 |
| MS.gene69188.t1 | AT3G52525 | 55.385 | 65 | 29 | 0 | 197 | 261 | 64 | 128 | 2.10e-18 | 80.5 |
| MS.gene69188.t1 | AT2G30400 | 52.308 | 65 | 31 | 0 | 199 | 263 | 252 | 316 | 3.14e-18 | 83.6 |
| MS.gene69188.t1 | AT5G58360 | 53.846 | 65 | 30 | 0 | 199 | 263 | 224 | 288 | 3.68e-17 | 80.1 |
| MS.gene69188.t1 | AT2G36026 | 55.000 | 60 | 27 | 0 | 205 | 264 | 92 | 151 | 4.75e-17 | 77.8 |
| MS.gene69188.t1 | AT1G06920 | 33.010 | 103 | 64 | 1 | 167 | 264 | 206 | 308 | 3.53e-16 | 77.8 |
| MS.gene69188.t1 | AT5G01840 | 48.529 | 68 | 35 | 0 | 203 | 270 | 202 | 269 | 3.71e-15 | 73.9 |
| MS.gene69188.t1 | AT5G22240 | 44.118 | 68 | 38 | 0 | 196 | 263 | 93 | 160 | 4.25e-13 | 67.0 |
| MS.gene69188.t1 | AT4G18830 | 45.902 | 61 | 33 | 0 | 199 | 259 | 282 | 342 | 7.42e-12 | 65.5 |
Find 67 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGCAGGGCCTGGATTCC+CGG | 0.272464 | 3.4:+96907434 | None:intergenic |
| CTCAAATTATAGTGATAAAA+AGG | 0.274257 | 3.4:-96907130 | MS.gene69188:CDS |
| GGTCCATTCTTCTAGTACTA+TGG | 0.311039 | 3.4:-96907175 | MS.gene69188:CDS |
| TGCGAGCTTTCATGGAGATT+TGG | 0.332540 | 3.4:-96906753 | MS.gene69188:CDS |
| AGTAATTGTGCGAGCTTTCA+TGG | 0.344864 | 3.4:-96906761 | MS.gene69188:CDS |
| GACACGTTGCATTGGTGTTC+CGG | 0.349518 | 3.4:+96907345 | None:intergenic |
| CACCGGAGAAAGACGGTATA+TGG | 0.359937 | 3.4:+96907416 | None:intergenic |
| TCCTCTTTCCCCGGGAATCC+AGG | 0.367021 | 3.4:-96907444 | MS.gene69188:CDS |
| TTTGGCAACAAATGTTCGTT+TGG | 0.381425 | 3.4:-96906735 | MS.gene69188:CDS |
| GGCGACGAAGCAGGAAGGTT+TGG | 0.382600 | 3.4:+96907366 | None:intergenic |
| TTATCACTATAATTTGAGAT+AGG | 0.385663 | 3.4:+96907135 | None:intergenic |
| ATACCCTATGTCATATGCTT+TGG | 0.387292 | 3.4:+96907389 | None:intergenic |
| GGCAAAAGAAAGCTTTGCTT+TGG | 0.397965 | 3.4:-96906923 | MS.gene69188:CDS |
| AGTGAGGTTTCAAAGTATTA+CGG | 0.405418 | 3.4:-96907046 | MS.gene69188:CDS |
| ATTTAACTAGCTCGAATAGA+AGG | 0.424510 | 3.4:-96907098 | MS.gene69188:CDS |
| AATGACCTTTCCTCTTTCCC+CGG | 0.427656 | 3.4:-96907453 | MS.gene69188:CDS |
| ACTTGACATAACCTTCGTTT+CGG | 0.428668 | 3.4:+96906960 | None:intergenic |
| GATGTCCGAGGCCAAGGACT+TGG | 0.437700 | 3.4:-96906833 | MS.gene69188:CDS |
| ATGGCAGGGCCTGGATTCCC+GGG | 0.439698 | 3.4:+96907435 | None:intergenic |
| GTTAGAGATGATAGAAGAGA+TGG | 0.441612 | 3.4:-96906857 | MS.gene69188:CDS |
| TTCTTGCTTAGCAAGATTCT+CGG | 0.449560 | 3.4:-96907208 | MS.gene69188:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.4:-96906953 | MS.gene69188:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.4:-96907001 | MS.gene69188:CDS |
| CTATGGATAGTACTAAAGTT+AGG | 0.470027 | 3.4:-96907158 | MS.gene69188:CDS |
| TGAAGAAGGTTGAGAGAGTG+AGG | 0.472397 | 3.4:-96907062 | MS.gene69188:CDS |
| CAATAGTTGCTCCAAGTCCT+TGG | 0.478606 | 3.4:+96906822 | None:intergenic |
| TCAAACAAATGTTCAAACTA+AGG | 0.481359 | 3.4:-96906689 | MS.gene69188:CDS |
| GGGGAAAGAGGAAAGGTCAT+TGG | 0.484366 | 3.4:+96907455 | None:intergenic |
| AGACGGTATATGGCAGGGCC+TGG | 0.484707 | 3.4:+96907426 | None:intergenic |
| ACTAGAAGAATGGACCTTCT+CGG | 0.488884 | 3.4:+96907182 | None:intergenic |
| GCCTGGATTCCCGGGGAAAG+AGG | 0.494617 | 3.4:+96907443 | None:intergenic |
| TATCCATAGTACTAGAAGAA+TGG | 0.495158 | 3.4:+96907172 | None:intergenic |
| AGAAACTCACTTCTTCTTGA+GGG | 0.501729 | 3.4:+96907270 | None:intergenic |
| TGGTGTTCCGGCGACGAAGC+AGG | 0.502249 | 3.4:+96907357 | None:intergenic |
| GACGATAAGTCGTGTGAAGA+AGG | 0.503045 | 3.4:-96907076 | MS.gene69188:CDS |
| GATGGAGATGTCCGAGGCCA+AGG | 0.503048 | 3.4:-96906839 | MS.gene69188:CDS |
| TGCCATATACCGTCTTTCTC+CGG | 0.503136 | 3.4:-96907418 | MS.gene69188:CDS |
| GAGCGACACATTTGAAAAGA+AGG | 0.503682 | 3.4:+96907477 | None:intergenic |
| AAACCTTCCTGCTTCGTCGC+CGG | 0.514759 | 3.4:-96907364 | MS.gene69188:CDS |
| TTGCTCCAAGTCCTTGGCCT+CGG | 0.515968 | 3.4:+96906828 | None:intergenic |
| AGCGACACATTTGAAAAGAA+GGG | 0.522344 | 3.4:+96907478 | None:intergenic |
| ATGACCTTTCCTCTTTCCCC+GGG | 0.522963 | 3.4:-96907452 | MS.gene69188:CDS |
| GGAGAAAGACGGTATATGGC+AGG | 0.531009 | 3.4:+96907420 | None:intergenic |
| TAGAAACTCACTTCTTCTTG+AGG | 0.531127 | 3.4:+96907269 | None:intergenic |
| TCATATGCTTTGGAGTTCAC+CGG | 0.541099 | 3.4:+96907399 | None:intergenic |
| CTAAATTCTAGAGATTATCA+TGG | 0.544872 | 3.4:-96906784 | MS.gene69188:CDS |
| GTCAAGTAGAATGGAGGAGA+AGG | 0.546067 | 3.4:-96906944 | MS.gene69188:CDS |
| GATTTCTTGAAGTCTTCGTA+AGG | 0.562850 | 3.4:+96906883 | None:intergenic |
| AATTGATAAAATCAATGAAG+AGG | 0.573253 | 3.4:-96907247 | MS.gene69188:CDS |
| AAGATTCTCGGAAGCCGAGA+AGG | 0.578226 | 3.4:-96907196 | MS.gene69188:CDS |
| AACTCCAAAGCATATGACAT+AGG | 0.582440 | 3.4:-96907393 | MS.gene69188:CDS |
| TCTTTGATGACACGTTGCAT+TGG | 0.597146 | 3.4:+96907337 | None:intergenic |
| TCTTCTTGAGGGAACGTCGG+AGG | 0.601171 | 3.4:+96907281 | None:intergenic |
| ACTCCAAAGCATATGACATA+GGG | 0.601832 | 3.4:-96907392 | MS.gene69188:CDS |
| TCGAAGAGGAACCGAAACGA+AGG | 0.602284 | 3.4:-96906971 | MS.gene69188:CDS |
| ATTAAGAAAGTGAAATCCAA+AGG | 0.608408 | 3.4:-96907315 | MS.gene69188:CDS |
| TGGAGTTCACCGGAGAAAGA+CGG | 0.608559 | 3.4:+96907409 | None:intergenic |
| GTTCCGGCGACGAAGCAGGA+AGG | 0.630275 | 3.4:+96907361 | None:intergenic |
| GATTCCCGGGGAAAGAGGAA+AGG | 0.637825 | 3.4:+96907448 | None:intergenic |
| GAGAAAGACGGTATATGGCA+GGG | 0.639308 | 3.4:+96907421 | None:intergenic |
| ACTTCTTCTTGAGGGAACGT+CGG | 0.649804 | 3.4:+96907278 | None:intergenic |
| AGTATTACGGAGAATCAAAG+AGG | 0.650942 | 3.4:-96907033 | MS.gene69188:CDS |
| TGGCAGGGCCTGGATTCCCG+GGG | 0.653477 | 3.4:+96907436 | None:intergenic |
| GGTTATGTCAAGTAGAATGG+AGG | 0.656874 | 3.4:-96906950 | MS.gene69188:CDS |
| AGAATGGAAGAGAATCGAAG+AGG | 0.657497 | 3.4:-96906985 | MS.gene69188:CDS |
| TCAAAGAGGAAAAGAAACGA+AGG | 0.672215 | 3.4:-96907019 | MS.gene69188:CDS |
| AGAAGAGATGGAGATGTCCG+AGG | 0.675634 | 3.4:-96906845 | MS.gene69188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATAAAATCAATGAAG+AGG | - | chr3.4:96906938-96906957 | MS.gene69188:CDS | 20.0% |
| !! | CTCAAATTATAGTGATAAAA+AGG | - | chr3.4:96907055-96907074 | MS.gene69188:CDS | 20.0% |
| !!! | TTATCACTATAATTTGAGAT+AGG | + | chr3.4:96907053-96907072 | None:intergenic | 20.0% |
| ! | ATTAAGAAAGTGAAATCCAA+AGG | - | chr3.4:96906870-96906889 | MS.gene69188:CDS | 25.0% |
| ! | TCAAACAAATGTTCAAACTA+AGG | - | chr3.4:96907496-96907515 | MS.gene69188:CDS | 25.0% |
| !! | CTAAATTCTAGAGATTATCA+TGG | - | chr3.4:96907401-96907420 | MS.gene69188:CDS | 25.0% |
| !!! | TGAAGATTTTTTACTGACTT+AGG | + | chr3.4:96907479-96907498 | None:intergenic | 25.0% |
| ATTTAACTAGCTCGAATAGA+AGG | - | chr3.4:96907087-96907106 | MS.gene69188:CDS | 30.0% | |
| CTATGGATAGTACTAAAGTT+AGG | - | chr3.4:96907027-96907046 | MS.gene69188:CDS | 30.0% | |
| TATCCATAGTACTAGAAGAA+TGG | + | chr3.4:96907016-96907035 | None:intergenic | 30.0% | |
| ! | AGTGAGGTTTCAAAGTATTA+CGG | - | chr3.4:96907139-96907158 | MS.gene69188:CDS | 30.0% |
| AACTCCAAAGCATATGACAT+AGG | - | chr3.4:96906792-96906811 | MS.gene69188:CDS | 35.0% | |
| ACTCCAAAGCATATGACATA+GGG | - | chr3.4:96906793-96906812 | MS.gene69188:CDS | 35.0% | |
| ACTTGACATAACCTTCGTTT+CGG | + | chr3.4:96907180-96907199 | None:intergenic | 35.0% | |
| AGAAACTCACTTCTTCTTGA+GGG | + | chr3.4:96906918-96906937 | None:intergenic | 35.0% | |
| AGCGACACATTTGAAAAGAA+GGG | + | chr3.4:96906710-96906729 | None:intergenic | 35.0% | |
| AGTATTACGGAGAATCAAAG+AGG | - | chr3.4:96907152-96907171 | MS.gene69188:CDS | 35.0% | |
| ATACCCTATGTCATATGCTT+TGG | + | chr3.4:96906799-96906818 | None:intergenic | 35.0% | |
| GAAGGTTATGTCAAGTAGAA+TGG | - | chr3.4:96907184-96907203 | MS.gene69188:CDS | 35.0% | |
| GATTTCTTGAAGTCTTCGTA+AGG | + | chr3.4:96907305-96907324 | None:intergenic | 35.0% | |
| GTTAGAGATGATAGAAGAGA+TGG | - | chr3.4:96907328-96907347 | MS.gene69188:CDS | 35.0% | |
| TAGAAACTCACTTCTTCTTG+AGG | + | chr3.4:96906919-96906938 | None:intergenic | 35.0% | |
| TCAAAGAGGAAAAGAAACGA+AGG | - | chr3.4:96907166-96907185 | MS.gene69188:CDS | 35.0% | |
| TGCTTTGGTGAAAAAGTCAA+AGG | - | chr3.4:96907277-96907296 | MS.gene69188:CDS | 35.0% | |
| TTCTTGCTTAGCAAGATTCT+CGG | - | chr3.4:96906977-96906996 | MS.gene69188:CDS | 35.0% | |
| TTTGGCAACAAATGTTCGTT+TGG | - | chr3.4:96907450-96907469 | MS.gene69188:CDS | 35.0% | |
| !!! | GCAACTATTGCAGTGTTTTT+TGG | - | chr3.4:96907376-96907395 | MS.gene69188:CDS | 35.0% |
| ACTAGAAGAATGGACCTTCT+CGG | + | chr3.4:96907006-96907025 | None:intergenic | 40.0% | |
| AGAATGGAAGAGAATCGAAG+AGG | - | chr3.4:96907200-96907219 | MS.gene69188:CDS | 40.0% | |
| AGTAATTGTGCGAGCTTTCA+TGG | - | chr3.4:96907424-96907443 | MS.gene69188:CDS | 40.0% | |
| GAGCGACACATTTGAAAAGA+AGG | + | chr3.4:96906711-96906730 | None:intergenic | 40.0% | |
| GGCAAAAGAAAGCTTTGCTT+TGG | - | chr3.4:96907262-96907281 | MS.gene69188:CDS | 40.0% | |
| GGTCCATTCTTCTAGTACTA+TGG | - | chr3.4:96907010-96907029 | MS.gene69188:CDS | 40.0% | |
| GGTTATGTCAAGTAGAATGG+AGG | - | chr3.4:96907187-96907206 | MS.gene69188:CDS | 40.0% | |
| ! | TCTTTGATGACACGTTGCAT+TGG | + | chr3.4:96906851-96906870 | None:intergenic | 40.0% |
| !! | TCATATGCTTTGGAGTTCAC+CGG | + | chr3.4:96906789-96906808 | None:intergenic | 40.0% |
| AATGACCTTTCCTCTTTCCC+CGG | - | chr3.4:96906732-96906751 | MS.gene69188:CDS | 45.0% | |
| ACTTCTTCTTGAGGGAACGT+CGG | + | chr3.4:96906910-96906929 | None:intergenic | 45.0% | |
| CAATAGTTGCTCCAAGTCCT+TGG | + | chr3.4:96907366-96907385 | None:intergenic | 45.0% | |
| GACGATAAGTCGTGTGAAGA+AGG | - | chr3.4:96907109-96907128 | MS.gene69188:CDS | 45.0% | |
| GAGAAAGACGGTATATGGCA+GGG | + | chr3.4:96906767-96906786 | None:intergenic | 45.0% | |
| GTCAAGTAGAATGGAGGAGA+AGG | - | chr3.4:96907241-96907260 | MS.gene69188:CDS | 45.0% | |
| TGAAGAAGGTTGAGAGAGTG+AGG | - | chr3.4:96907123-96907142 | MS.gene69188:CDS | 45.0% | |
| TGCCATATACCGTCTTTCTC+CGG | - | chr3.4:96906767-96906786 | MS.gene69188:CDS | 45.0% | |
| TGCGAGCTTTCATGGAGATT+TGG | - | chr3.4:96907432-96907451 | MS.gene69188:CDS | 45.0% | |
| AAGATTCTCGGAAGCCGAGA+AGG | - | chr3.4:96906989-96907008 | MS.gene69188:CDS | 50.0% | |
| AGAAGAGATGGAGATGTCCG+AGG | - | chr3.4:96907340-96907359 | MS.gene69188:CDS | 50.0% | |
| ATGACCTTTCCTCTTTCCCC+GGG | - | chr3.4:96906733-96906752 | MS.gene69188:CDS | 50.0% | |
| CACCGGAGAAAGACGGTATA+TGG | + | chr3.4:96906772-96906791 | None:intergenic | 50.0% | |
| GGAGAAAGACGGTATATGGC+AGG | + | chr3.4:96906768-96906787 | None:intergenic | 50.0% | |
| GGGGAAAGAGGAAAGGTCAT+TGG | + | chr3.4:96906733-96906752 | None:intergenic | 50.0% | |
| TCGAAGAGGAACCGAAACGA+AGG | - | chr3.4:96907214-96907233 | MS.gene69188:CDS | 50.0% | |
| TGGAGTTCACCGGAGAAAGA+CGG | + | chr3.4:96906779-96906798 | None:intergenic | 50.0% | |
| ! | GACACGTTGCATTGGTGTTC+CGG | + | chr3.4:96906843-96906862 | None:intergenic | 50.0% |
| AAACCTTCCTGCTTCGTCGC+CGG | - | chr3.4:96906821-96906840 | MS.gene69188:CDS | 55.0% | |
| GATTCCCGGGGAAAGAGGAA+AGG | + | chr3.4:96906740-96906759 | None:intergenic | 55.0% | |
| TCTTCTTGAGGGAACGTCGG+AGG | + | chr3.4:96906907-96906926 | None:intergenic | 55.0% | |
| TTGCTCCAAGTCCTTGGCCT+CGG | + | chr3.4:96907360-96907379 | None:intergenic | 55.0% | |
| !!! | GAACGTCGGAGGTGCTTTTG+CGG | + | chr3.4:96906896-96906915 | None:intergenic | 55.0% |
| AGACGGTATATGGCAGGGCC+TGG | + | chr3.4:96906762-96906781 | None:intergenic | 60.0% | |
| GATGGAGATGTCCGAGGCCA+AGG | - | chr3.4:96907346-96907365 | MS.gene69188:CDS | 60.0% | |
| GATGTCCGAGGCCAAGGACT+TGG | - | chr3.4:96907352-96907371 | MS.gene69188:CDS | 60.0% | |
| GGCGACGAAGCAGGAAGGTT+TGG | + | chr3.4:96906822-96906841 | None:intergenic | 60.0% | |
| TATGGCAGGGCCTGGATTCC+CGG | + | chr3.4:96906754-96906773 | None:intergenic | 60.0% | |
| TCCTCTTTCCCCGGGAATCC+AGG | - | chr3.4:96906741-96906760 | MS.gene69188:CDS | 60.0% | |
| !!! | GGAGGTGCTTTTGCGGCCTT+TGG | + | chr3.4:96906889-96906908 | None:intergenic | 60.0% |
| ATGGCAGGGCCTGGATTCCC+GGG | + | chr3.4:96906753-96906772 | None:intergenic | 65.0% | |
| GCCTGGATTCCCGGGGAAAG+AGG | + | chr3.4:96906745-96906764 | None:intergenic | 65.0% | |
| GTTCCGGCGACGAAGCAGGA+AGG | + | chr3.4:96906827-96906846 | None:intergenic | 65.0% | |
| TGGTGTTCCGGCGACGAAGC+AGG | + | chr3.4:96906831-96906850 | None:intergenic | 65.0% | |
| TGGCAGGGCCTGGATTCCCG+GGG | + | chr3.4:96906752-96906771 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96906675 | 96907532 | 96906675 | ID=MS.gene69188 |
| chr3.4 | mRNA | 96906675 | 96907532 | 96906675 | ID=MS.gene69188.t1;Parent=MS.gene69188 |
| chr3.4 | exon | 96906675 | 96907532 | 96906675 | ID=MS.gene69188.t1.exon1;Parent=MS.gene69188.t1 |
| chr3.4 | CDS | 96906675 | 96907532 | 96906675 | ID=cds.MS.gene69188.t1;Parent=MS.gene69188.t1 |
| Gene Sequence |
| Protein sequence |
