AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69347

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69347.t1 MTR_3g115050 99.632 544 2 0 1 544 1 544 0.0 1114
MS.gene69347.t1 MTR_1g026410 85.055 542 77 1 7 544 2 543 0.0 942
MS.gene69347.t1 MTR_4g075690 74.906 534 133 1 11 544 11 543 0.0 849
MS.gene69347.t1 MTR_4g049390 71.042 518 150 0 23 540 20 537 0.0 793
MS.gene69347.t1 MTR_2g088080 72.921 517 140 0 23 539 23 539 0.0 785
MS.gene69347.t1 MTR_4g048350 69.498 518 157 1 23 540 20 536 0.0 771
MS.gene69347.t1 MTR_4g132320 70.872 539 156 1 7 544 7 545 0.0 763
MS.gene69347.t1 MTR_4g075690 73.973 438 113 1 11 448 11 447 0.0 684
MS.gene69347.t1 MTR_2g088080 71.397 458 131 0 82 539 1 458 0.0 674
MS.gene69347.t1 MTR_8g479390 60.928 517 199 2 25 540 26 540 0.0 644
MS.gene69347.t1 MTR_5g018270 59.923 519 204 2 22 540 23 537 0.0 627
MS.gene69347.t1 MTR_8g479380 56.809 514 219 3 24 536 23 534 0.0 609
MS.gene69347.t1 MTR_4g083190 53.008 532 241 4 11 534 8 538 0.0 561
MS.gene69347.t1 MTR_4g083210 52.052 536 249 5 3 534 1 532 0.0 560
MS.gene69347.t1 MTR_3g083440 51.481 540 250 5 3 534 1 536 0.0 550
MS.gene69347.t1 MTR_3g083390 51.481 540 250 5 3 534 1 536 0.0 549
MS.gene69347.t1 MTR_3g083430 51.296 540 251 5 3 534 1 536 0.0 547
MS.gene69347.t1 MTR_3g083400 51.296 540 251 5 3 534 1 536 0.0 546
MS.gene69347.t1 MTR_3g083450 52.703 518 236 4 25 534 21 537 0.0 542
MS.gene69347.t1 MTR_4g101650 52.294 545 239 7 11 535 8 551 0.0 533
MS.gene69347.t1 MTR_3g008580 51.705 528 234 7 27 534 26 552 1.28e-180 521
MS.gene69347.t1 MTR_7g051440 52.632 532 226 9 27 537 26 552 8.43e-179 517
MS.gene69347.t1 MTR_3g083410 52.033 492 227 4 51 534 10 500 5.72e-176 506
MS.gene69347.t1 MTR_1g090707 48.106 528 262 7 19 535 12 538 8.71e-162 473
MS.gene69347.t1 MTR_4g133150 58.654 208 67 2 134 339 21 211 1.14e-71 228
MS.gene69347.t1 MTR_5g020620 30.351 570 347 18 5 533 1 561 8.13e-61 210
MS.gene69347.t1 MTR_5g020600 29.550 555 335 19 20 533 27 566 3.34e-57 201
MS.gene69347.t1 MTR_3g462760 28.014 564 363 13 5 533 1 556 1.24e-54 193
MS.gene69347.t1 MTR_5g069680 27.866 567 364 16 3 533 1 558 1.14e-53 191
MS.gene69347.t1 MTR_5g081810 29.026 534 336 13 35 533 4 529 3.53e-53 189
MS.gene69347.t1 MTR_4g015120 27.437 554 365 12 11 533 10 557 8.44e-50 180
MS.gene69347.t1 MTR_3g078740 25.413 606 348 21 11 537 8 588 1.95e-46 172
MS.gene69347.t1 MTR_3g078700 26.496 585 329 20 5 537 4 539 1.64e-45 168
MS.gene69347.t1 MTR_8g091390 25.818 581 335 18 20 538 26 572 1.07e-43 164
MS.gene69347.t1 MTR_2g008330 27.533 523 337 15 51 533 59 579 3.11e-42 159
MS.gene69347.t1 MTR_5g073210 28.846 572 342 21 12 533 4 560 3.15e-42 159
MS.gene69347.t1 MTR_3g101640 29.084 502 302 16 44 499 44 537 2.20e-40 154
MS.gene69347.t1 MTR_7g458880 24.357 583 380 16 2 533 8 580 5.23e-40 153
MS.gene69347.t1 MTR_3g101635 29.006 493 298 15 51 499 48 532 2.31e-39 151
MS.gene69347.t1 MTR_3g071890 27.745 501 314 14 51 510 54 547 6.73e-39 150
MS.gene69347.t1 MTR_8g027375 26.121 513 341 11 30 506 34 544 1.55e-38 149
MS.gene69347.t1 MTR_7g065980 28.827 503 299 20 47 498 42 536 2.64e-38 148
MS.gene69347.t1 MTR_3g078730 24.826 576 341 16 10 537 7 538 4.77e-38 147
MS.gene69347.t1 MTR_7g060460 23.827 554 367 15 30 533 33 581 1.18e-36 144
MS.gene69347.t1 MTR_7g058690 24.368 554 363 17 30 533 33 580 2.73e-36 142
MS.gene69347.t1 MTR_5g083360 25.992 504 309 15 48 499 42 533 2.04e-35 140
MS.gene69347.t1 MTR_7g062250 24.682 551 362 16 30 533 34 578 6.20e-35 139
MS.gene69347.t1 MTR_7g062310 25.095 526 339 16 21 499 42 559 1.06e-33 135
MS.gene69347.t1 MTR_7g065970 25.824 546 336 18 1 493 1 530 2.35e-33 134
MS.gene69347.t1 MTR_4g064530 25.382 524 320 18 29 499 46 551 5.58e-33 133
MS.gene69347.t1 MTR_4g019225 26.316 551 347 16 34 533 30 572 1.26e-31 129
MS.gene69347.t1 MTR_4g064530 24.855 519 320 18 30 493 44 547 1.14e-30 126
MS.gene69347.t1 MTR_4g133160 51.376 109 39 1 415 523 1 95 7.64e-29 110
MS.gene69347.t1 MTR_5g018290 62.121 66 25 0 475 540 5 70 4.24e-23 93.2
MS.gene69347.t1 MTR_5g081790 28.462 260 153 8 258 491 168 420 3.72e-12 68.9
MS.gene69347.t1 MTR_5g081790 24.868 189 126 5 8 188 6 186 8.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69347.t1 AT1G76160 79.777 539 108 1 6 544 4 541 0.0 908
MS.gene69347.t1 AT1G41830 79.104 536 111 1 9 544 8 542 0.0 894
MS.gene69347.t1 AT1G21850 74.187 523 133 2 19 541 18 538 0.0 814
MS.gene69347.t1 AT1G21860 70.130 539 155 3 2 540 5 537 0.0 796
MS.gene69347.t1 AT4G22010 69.444 540 161 2 6 544 5 541 0.0 781
MS.gene69347.t1 AT4G38420 67.844 538 167 3 12 543 12 549 0.0 760
MS.gene69347.t1 AT4G28090 62.152 539 192 6 9 540 8 541 0.0 692
MS.gene69347.t1 AT4G38420 66.596 470 151 3 12 475 12 481 0.0 645
MS.gene69347.t1 AT5G66920 58.189 519 215 1 22 540 29 545 0.0 637
MS.gene69347.t1 AT4G38420 67.043 443 140 3 12 448 12 454 0.0 608
MS.gene69347.t1 AT1G55570 54.917 539 233 4 10 539 9 546 0.0 592
MS.gene69347.t1 AT3G13400 54.851 536 232 5 11 538 9 542 0.0 582
MS.gene69347.t1 AT3G13400 54.851 536 232 5 11 538 9 542 0.0 582
MS.gene69347.t1 AT1G55560 53.918 536 237 5 11 538 8 541 0.0 578
MS.gene69347.t1 AT4G37160 53.817 524 236 3 22 544 23 541 0.0 572
MS.gene69347.t1 AT2G23630 54.943 526 233 3 17 542 23 544 0.0 569
MS.gene69347.t1 AT2G23630 54.943 526 233 3 17 542 18 539 0.0 569
MS.gene69347.t1 AT3G13390 55.556 522 222 4 26 538 24 544 0.0 568
MS.gene69347.t1 AT5G48450 52.865 541 238 10 12 537 8 546 0.0 546
MS.gene69347.t1 AT5G48450 52.865 541 238 10 12 537 8 546 0.0 546
MS.gene69347.t1 AT4G12420 52.102 547 241 7 11 537 6 551 0.0 544
MS.gene69347.t1 AT4G12420 52.102 547 241 7 11 537 6 551 0.0 544
MS.gene69347.t1 AT1G75790 49.534 537 260 3 11 536 8 544 0.0 526
MS.gene69347.t1 AT4G25240 50.452 553 253 8 1 534 1 551 0.0 525
MS.gene69347.t1 AT4G25240 50.452 553 253 8 1 534 1 551 0.0 525
MS.gene69347.t1 AT5G51480 49.813 536 248 9 19 534 17 551 0.0 525
MS.gene69347.t1 AT4G37160 54.673 428 192 2 22 448 23 449 1.51e-165 478
MS.gene69347.t1 AT4G39830 28.857 551 325 15 11 506 17 555 2.04e-55 196
MS.gene69347.t1 AT2G38080 27.339 545 352 13 25 533 22 558 4.82e-54 192
MS.gene69347.t1 AT5G58910 28.196 571 352 16 11 533 7 567 1.80e-52 188
MS.gene69347.t1 AT5G21105 27.586 551 326 16 12 507 22 554 1.08e-51 186
MS.gene69347.t1 AT5G03260 28.470 562 352 18 11 533 7 557 1.10e-51 186
MS.gene69347.t1 AT5G58910 29.032 527 320 15 51 533 50 566 6.07e-51 184
MS.gene69347.t1 AT5G21105 28.037 535 312 16 12 491 22 538 2.93e-50 181
MS.gene69347.t1 AT5G01190 27.580 533 354 12 32 533 27 558 1.18e-49 180
MS.gene69347.t1 AT5G21100 26.715 554 333 17 34 534 28 561 2.51e-49 179
MS.gene69347.t1 AT5G01190 28.210 514 337 12 51 533 32 544 4.08e-49 178
MS.gene69347.t1 AT5G58910 28.463 527 316 16 51 533 14 523 1.44e-46 171
MS.gene69347.t1 AT2G46570 25.603 539 352 13 30 527 32 562 1.86e-41 157
MS.gene69347.t1 AT4G39830 28.942 463 263 14 98 506 8 458 4.78e-41 155
MS.gene69347.t1 AT4G39830 28.942 463 263 14 98 506 10 460 5.67e-41 154
MS.gene69347.t1 AT2G30210 27.788 529 331 16 10 493 8 530 9.46e-41 155
MS.gene69347.t1 AT5G05390 28.138 494 314 13 44 499 41 531 7.64e-40 152
MS.gene69347.t1 AT5G09360 28.719 484 303 13 51 498 57 534 1.12e-39 152
MS.gene69347.t1 AT5G01050 25.508 541 348 13 41 535 39 570 1.15e-38 149
MS.gene69347.t1 AT5G01040 26.160 539 345 14 41 535 39 568 7.13e-38 147
MS.gene69347.t1 AT2G29130 25.501 549 359 17 30 533 30 573 9.54e-38 147
MS.gene69347.t1 AT5G48100 27.146 501 315 16 51 507 43 537 2.47e-37 145
MS.gene69347.t1 AT3G09220 26.769 523 338 13 10 493 11 527 3.24e-37 145
MS.gene69347.t1 AT4G39830 28.078 463 254 14 98 506 10 447 9.26e-37 142
MS.gene69347.t1 AT5G07130 28.063 506 306 16 51 506 45 542 1.32e-36 143
MS.gene69347.t1 AT1G18140 26.731 520 314 19 32 493 31 541 2.78e-35 140
MS.gene69347.t1 AT2G40370 25.174 576 375 15 12 533 7 580 3.46e-34 137
MS.gene69347.t1 AT2G46570 25.519 482 310 13 87 527 4 477 2.32e-33 133
MS.gene69347.t1 AT5G21105 28.746 327 194 9 206 507 51 363 1.25e-31 126
MS.gene69347.t1 AT3G09220 26.107 429 278 11 103 493 3 430 1.97e-26 112
MS.gene69347.t1 AT5G07130 27.155 464 280 16 93 506 2 457 8.41e-26 111
MS.gene69347.t1 AT5G07130 27.155 464 280 16 93 506 2 457 8.41e-26 111
MS.gene69347.t1 AT5G60020 25.784 287 194 7 5 279 6 285 3.16e-24 107
MS.gene69347.t1 AT5G60020 25.784 287 194 7 5 279 6 285 3.33e-24 107
MS.gene69347.t1 AT5G60020 27.386 241 162 6 51 279 14 253 1.11e-23 105

Find 158 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAAAGCAGCTGGCGGTTT+TGG 0.198928 3.3:-93863025 MS.gene69347:CDS
GGAGATTACACTGTCCTTAT+TGG 0.249934 3.3:-93862947 MS.gene69347:CDS
CCACAGAGACGTGCATTCTT+TGG 0.252281 3.3:+93858574 None:intergenic
TTCCAGTTGAAGAATTTATA+TGG 0.264147 3.3:+93864802 None:intergenic
GAACAATGTTCTCGTTGTTT+TGG 0.267342 3.3:+93859450 None:intergenic
GGCTACTCTTTCTTTGTTGT+TGG 0.288891 3.3:-93859410 MS.gene69347:CDS
GGAACTTGAGGACCGAGTTT+TGG 0.289721 3.3:-93858675 MS.gene69347:CDS
GGGAAAGGAACTGGAATTCT+AGG 0.292928 3.3:+93862980 None:intergenic
AGCTCTCCTGGTCAGGTTAA+TGG 0.304843 3.3:-93859662 MS.gene69347:CDS
TCATTCGAAGATGGTGTTTC+GGG 0.308208 3.3:-93863145 MS.gene69347:CDS
CTCATTCGAAGATGGTGTTT+CGG 0.314795 3.3:-93863146 MS.gene69347:CDS
AACTCTGCAGGCGCAGTATC+AGG 0.316792 3.3:-93860174 MS.gene69347:CDS
GTGTAATCTCCAGCTGGTTC+AGG 0.327562 3.3:+93862959 None:intergenic
CTTCAAGTGAAGGATCAAAT+TGG 0.340873 3.3:-93863079 MS.gene69347:CDS
TGGTAGGATCCTTGTGGGTT+AGG 0.342056 3.3:+93859725 None:intergenic
GTTCAGAGCTATCATCTTGA+TGG 0.346311 3.3:-93859431 MS.gene69347:CDS
TAAAGGTATATCCCTATTCA+TGG 0.349134 3.3:-93858735 MS.gene69347:intron
TTGATCAATGGGCAATTTCC+TGG 0.354638 3.3:-93864604 MS.gene69347:CDS
ATCAATGGTCGTGGACCTAA+TGG 0.358266 3.3:-93860576 MS.gene69347:CDS
ATAAATAGCCGTCCATGAAT+AGG 0.359487 3.3:+93858723 None:intergenic
AAGTTCCTCCCTGGTGGGAT+GGG 0.362034 3.3:+93863112 None:intergenic
ATCCATATAAATTCTTCAAC+TGG 0.363390 3.3:-93864804 MS.gene69347:CDS
GCTACTCTTTCTTTGTTGTT+GGG 0.364251 3.3:-93859409 MS.gene69347:intron
GCGAGCTTAAGAGGCGTGTC+TGG 0.366650 3.3:+93859599 None:intergenic
CACAACAAAGACAATCATTC+TGG 0.374461 3.3:-93859687 MS.gene69347:CDS
GATCCTTGTGGGTTAGGCCT+TGG 0.380517 3.3:+93859731 None:intergenic
TAGGTCCACGACCATTGATT+AGG 0.384593 3.3:+93860580 None:intergenic
ACGTTGAATGATAATCCATT+AGG 0.386904 3.3:+93860561 None:intergenic
TAAACCTTTGCTAGCTCAAA+GGG 0.388940 3.3:+93858525 None:intergenic
GTTAATGGCAAGCAAAGATA+TGG 0.394297 3.3:-93859647 MS.gene69347:CDS
ACACTGTCCTTATTGGTGAT+TGG 0.395975 3.3:-93862940 MS.gene69347:CDS
TACAGGGTATATTGATCAAT+GGG 0.402058 3.3:-93864615 MS.gene69347:intron
CGAATGAGTTCCTTCTCTGC+TGG 0.403249 3.3:+93863161 None:intergenic
AAGTAATCAGCGAGCTTAAG+AGG 0.406604 3.3:+93859590 None:intergenic
ACTTGTACCAATCACCAATA+AGG 0.411862 3.3:+93862933 None:intergenic
ATCATTCTGGCTAGCTCTCC+TGG 0.412395 3.3:-93859674 MS.gene69347:CDS
TAAATAGCCGTCCATGAATA+GGG 0.412871 3.3:+93858724 None:intergenic
CTTCTACCAACTTCAGTTTG+TGG 0.415762 3.3:+93860367 None:intergenic
AATACCTGATTGAGCGGGCT+TGG 0.429385 3.3:+93860106 None:intergenic
TCTGGCTAGCTCTCCTGGTC+AGG 0.435795 3.3:-93859669 MS.gene69347:CDS
GAAGTTCCTCCCTGGTGGGA+TGG 0.436120 3.3:+93863111 None:intergenic
GCCTTGGTCCACTTGCTGTA+AGG 0.436164 3.3:+93859747 None:intergenic
TTACAGGGTATATTGATCAA+TGG 0.440666 3.3:-93864616 MS.gene69347:intron
GCTGGTTCAGGGAAAGGAAC+TGG 0.441020 3.3:+93862971 None:intergenic
TGAACCAAGCCCGCTCAATC+AGG 0.441372 3.3:-93860110 MS.gene69347:intron
AGACGTGCATTCTTTGGAAT+AGG 0.443501 3.3:+93858580 None:intergenic
ATTGAAAGCCCATCTTGATA+AGG 0.446007 3.3:-93860631 MS.gene69347:CDS
AACTGCTGATCAACCTTCTC+AGG 0.451706 3.3:-93860268 MS.gene69347:CDS
GACCAATCAACTTGGATTGT+AGG 0.454328 3.3:+93860135 None:intergenic
TTGAAAGCCCATCTTGATAA+GGG 0.458638 3.3:-93860630 MS.gene69347:CDS
TGGACAACTTCTAGCAGAAA+CGG 0.460958 3.3:-93859074 MS.gene69347:CDS
GTTCCTTTCCCTGAACCAGC+TGG 0.461491 3.3:-93862968 MS.gene69347:CDS
ATTAGGACTCCATCAGGTAT+AGG 0.466437 3.3:+93860597 None:intergenic
AGTTCCTCCCTGGTGGGATG+GGG 0.469341 3.3:+93863113 None:intergenic
ACTCTCAATTTAGCTGCTGT+TGG 0.471199 3.3:-93864880 MS.gene69347:CDS
GCTTCTTTCCCTTATCAAGA+TGG 0.472069 3.3:+93860622 None:intergenic
CTTCTTTCCCTTATCAAGAT+GGG 0.472616 3.3:+93860623 None:intergenic
AAACGCGTAAATAAAATTGT+TGG 0.475981 3.3:+93858635 None:intergenic
TTTGTAACAGAATGAATGTC+TGG 0.477062 3.3:+93864580 None:intergenic
TACGGTGACATTTACCCACT+TGG 0.481704 3.3:-93864772 MS.gene69347:CDS
CGTCTCTGTGGTAGGGCAAG+TGG 0.486667 3.3:-93858562 MS.gene69347:CDS
TGTAATCTCCAGCTGGTTCA+GGG 0.488077 3.3:+93862960 None:intergenic
CCACAAGGATCCTACCATTA+CGG 0.488883 3.3:-93859719 MS.gene69347:CDS
TTCAACTGGAATGTTACTTA+CGG 0.490501 3.3:-93864790 MS.gene69347:CDS
TGCTTGCCATTAACCTGACC+AGG 0.497002 3.3:+93859656 None:intergenic
CCCACTTGGAGTTCGTCAAA+GGG 0.500885 3.3:-93864758 MS.gene69347:intron
GACCTACAATCCAAGTTGAT+TGG 0.501737 3.3:-93860137 MS.gene69347:CDS
GTCTCTGTGGTAGGGCAAGT+GGG 0.506135 3.3:-93858561 MS.gene69347:CDS
CAGGAAAGACTTATAGACTT+AGG 0.506224 3.3:-93860437 MS.gene69347:CDS
CTCCTCACTTGATGTTCATG+TGG 0.506285 3.3:-93860313 MS.gene69347:CDS
ATTGTATCATACCGTATGGT+TGG 0.507927 3.3:+93862910 None:intergenic
ACAACATGCCCCATCCCACC+AGG 0.510773 3.3:-93863121 MS.gene69347:CDS
TCTCCAGCTGGTTCAGGGAA+AGG 0.511026 3.3:+93862965 None:intergenic
ACCCACTTGGAGTTCGTCAA+AGG 0.514899 3.3:-93864759 MS.gene69347:CDS
CTTCGCTATAGCAACTCTGC+AGG 0.516465 3.3:-93860186 MS.gene69347:CDS
TCAAAACCACAAACTGAAGT+TGG 0.517789 3.3:-93860373 MS.gene69347:CDS
GGACAACTTCTAGCAGAAAC+GGG 0.518926 3.3:-93859073 MS.gene69347:CDS
AGTGGTGGTGAGAATCTTAG+AGG 0.523161 3.3:+93860215 None:intergenic
ACTTGGATTGTAGGTCCACC+AGG 0.525149 3.3:+93860144 None:intergenic
ATGAACCCTTTCTCATCTCA+TGG 0.525350 3.3:-93864522 MS.gene69347:intron
CAAACTGAAGTTGGTAGAAG+TGG 0.526063 3.3:-93860364 MS.gene69347:CDS
AGGACTAACCTTACAGCAAG+TGG 0.527132 3.3:-93859755 MS.gene69347:CDS
CCTGATGGAGTCCTAATCAA+TGG 0.528672 3.3:-93860591 MS.gene69347:CDS
TCACAGATGTGTCAAGGTAA+AGG 0.529173 3.3:+93859510 None:intergenic
CTAGCATTTCAGAAAGCAGC+TGG 0.529779 3.3:-93863034 MS.gene69347:CDS
GGTTCAAAGACCAATCAACT+TGG 0.532843 3.3:+93860127 None:intergenic
CTTGTACCATGAGATGAGAA+AGG 0.533419 3.3:+93864516 None:intergenic
GCTGATTACTTCAAAATCTC+CGG 0.535779 3.3:-93859578 MS.gene69347:CDS
CGAGCTTAAGAGGCGTGTCT+GGG 0.536643 3.3:+93859600 None:intergenic
AGAATGCACGTCTCTGTGGT+AGG 0.539128 3.3:-93858570 MS.gene69347:CDS
ATTTCAATGTGTAGTATGGA+TGG 0.541372 3.3:-93859104 MS.gene69347:intron
AAGAAGCTTCCTATACCTGA+TGG 0.542552 3.3:-93860606 MS.gene69347:CDS
TCTGAGAGACCCACTGGTGG+TGG 0.543627 3.3:-93859533 MS.gene69347:CDS
AAGGTAAAGGCCACCACCAG+TGG 0.545521 3.3:+93859523 None:intergenic
AGGAAACTCGTCTCTGATTG+AGG 0.545951 3.3:+93858600 None:intergenic
CCATTGATTAGGACTCCATC+AGG 0.546662 3.3:+93860591 None:intergenic
AGAAGGAACTCATTCGAAGA+TGG 0.555890 3.3:-93863154 MS.gene69347:CDS
CGTAATGGTAGGATCCTTGT+GGG 0.556156 3.3:+93859720 None:intergenic
GGAATGGGATCCAGCAGAGA+AGG 0.564212 3.3:-93863171 MS.gene69347:CDS
GCTTTCTGAAATGCTAGAGA+TGG 0.570090 3.3:+93863040 None:intergenic
TTGTACCATGAGATGAGAAA+GGG 0.571758 3.3:+93864517 None:intergenic
TGTTGAAGACATTGATAATG+AGG 0.576283 3.3:+93864551 None:intergenic
AGCATATCTGAGAGACCCAC+TGG 0.578496 3.3:-93859539 MS.gene69347:CDS
CACTTGACAACGTTGGAATG+TGG 0.580641 3.3:-93858696 MS.gene69347:CDS
CACTTATATACTTCAAGTGA+AGG 0.581224 3.3:-93863089 MS.gene69347:CDS
TATGTTGCACTTGACAACGT+TGG 0.582455 3.3:-93858703 MS.gene69347:CDS
GGAGTCCTAATCAATGGTCG+TGG 0.582546 3.3:-93860585 MS.gene69347:CDS
ATACTGTCGTGCCCAAAACT+CGG 0.586339 3.3:+93858663 None:intergenic
TTATCATTCAACGTTGAACA+AGG 0.591618 3.3:-93860552 MS.gene69347:intron
AATCTTAGAGGAGAATCTTG+TGG 0.591739 3.3:+93860227 None:intergenic
AGGACAGTGTAATCTCCAGC+TGG 0.591788 3.3:+93862953 None:intergenic
GAATGCACGTCTCTGTGGTA+GGG 0.593245 3.3:-93858569 MS.gene69347:CDS
GATCTTCAGCTGAAGTAATG+TGG 0.599045 3.3:+93864824 None:intergenic
ACCCTTTGACGAACTCCAAG+TGG 0.599197 3.3:+93864757 None:intergenic
AACCTTTGCTAGCTCAAAGG+GGG 0.603610 3.3:+93858527 None:intergenic
AGTAGCAACACATAGAAGCA+AGG 0.603929 3.3:+93864855 None:intergenic
TTGTGTTTATGAGACCGTAA+TGG 0.605518 3.3:+93859705 None:intergenic
ACAGAATGAATGTCTGGACC+AGG 0.605888 3.3:+93864586 None:intergenic
CTGAAGTTGGTAGAAGTGGA+AGG 0.607607 3.3:-93860360 MS.gene69347:CDS
AGTGAAATACCTGATTGAGC+GGG 0.607815 3.3:+93860101 None:intergenic
AGTAGCGCGTTGCACCACTC+AGG 0.609268 3.3:-93859033 MS.gene69347:intron
ATATAAGTGAAGTTCCTCCC+TGG 0.613485 3.3:+93863103 None:intergenic
CCGTAATGGTAGGATCCTTG+TGG 0.613529 3.3:+93859719 None:intergenic
AAGTGAAATACCTGATTGAG+CGG 0.617943 3.3:+93860100 None:intergenic
ACGTTGGAATGTGGAACTTG+AGG 0.618713 3.3:-93858687 MS.gene69347:CDS
ATAGCGAAGCACCGCAGTGG+TGG 0.618940 3.3:+93860200 None:intergenic
ACAATGTAGTAGTCCTGAGA+AGG 0.622508 3.3:+93860255 None:intergenic
GTTTATGAGACCGTAATGGT+AGG 0.623341 3.3:+93859709 None:intergenic
TTGGTACAAGTCCAACCATA+CGG 0.625373 3.3:-93862921 MS.gene69347:intron
TCCTCACTTGATGTTCATGT+GGG 0.629604 3.3:-93860312 MS.gene69347:CDS
TAAGTGAAGTTCCTCCCTGG+TGG 0.629747 3.3:+93863106 None:intergenic
CTTGGATTGTAGGTCCACCA+GGG 0.631318 3.3:+93860145 None:intergenic
AAGTGAAGTTCCTCCCTGGT+GGG 0.631783 3.3:+93863107 None:intergenic
CTTGCATCACAGATGTGTCA+AGG 0.635259 3.3:+93859504 None:intergenic
GGTATATCCCTATTCATGGA+CGG 0.635653 3.3:-93858731 MS.gene69347:CDS
CCAAAGAATGCACGTCTCTG+TGG 0.641933 3.3:-93858574 MS.gene69347:CDS
ACCTTACAGCAAGTGGACCA+AGG 0.643171 3.3:-93859748 MS.gene69347:CDS
GAGGCATTAGGATACTCAGT+AGG 0.651245 3.3:-93863003 MS.gene69347:CDS
AACATCAAGTGAGGAGTACG+TGG 0.656057 3.3:+93860320 None:intergenic
AGGTAAAGGCCACCACCAGT+GGG 0.656498 3.3:+93859524 None:intergenic
GGACCAAGGCCTAACCCACA+AGG 0.659246 3.3:-93859734 MS.gene69347:CDS
CCCTTTGACGAACTCCAAGT+GGG 0.661178 3.3:+93864758 None:intergenic
TCAATGTGTAGTATGGATGG+AGG 0.663408 3.3:-93859101 MS.gene69347:intron
GCATTTCAGAAAGCAGCTGG+CGG 0.666254 3.3:-93863031 MS.gene69347:CDS
TTCTCAGGACTACTACATTG+TGG 0.670612 3.3:-93860253 MS.gene69347:CDS
CAACATGCCCCATCCCACCA+GGG 0.673364 3.3:-93863120 MS.gene69347:CDS
TAGACTTAGGATATCAAACG+TGG 0.675596 3.3:-93860424 MS.gene69347:CDS
TCCCACATGAACATCAAGTG+AGG 0.677217 3.3:+93860311 None:intergenic
TAATATGATTCTCACCTGAG+TGG 0.682067 3.3:+93859019 None:intergenic
TTGGATTGTAGGTCCACCAG+GGG 0.683406 3.3:+93860146 None:intergenic
AAACCTTTGCTAGCTCAAAG+GGG 0.688074 3.3:+93858526 None:intergenic
GCTATAGCGAAGCACCGCAG+TGG 0.699087 3.3:+93860197 None:intergenic
AGACTTAGGATATCAAACGT+GGG 0.700576 3.3:-93860423 MS.gene69347:CDS
ATATCTGAGAGACCCACTGG+TGG 0.716405 3.3:-93859536 MS.gene69347:CDS
CATGCCCCATCCCACCAGGG+AGG 0.735313 3.3:-93863117 MS.gene69347:CDS
GTAGTATGGATGGAGGACAG+TGG 0.742907 3.3:-93859094 MS.gene69347:intron
TGGATTGTAGGTCCACCAGG+GGG 0.761885 3.3:+93860147 None:intergenic
TAAGATTCTCACCACCACTG+CGG 0.773633 3.3:-93860211 MS.gene69347:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAATAAAAAAAAA+TGG + chr3.3:93858789-93858808 None:intergenic 0.0%
!! AAATTAAAACATTTAAAAAG+TGG + chr3.3:93859673-93859692 None:intergenic 10.0%
!!! ACAGTTTTTTTTTTTATATA+AGG + chr3.3:93862353-93862372 None:intergenic 10.0%
!!! CTTATAAATCAATTTTAAAA+TGG + chr3.3:93858980-93858999 None:intergenic 10.0%
!!! TTAAAATGAATTTTTTTACA+AGG - chr3.3:93861150-93861169 MS.gene69347:intron 10.0%
!!! TTATTTAAAAAAACTTTTCT+TGG - chr3.3:93862384-93862403 MS.gene69347:intron 10.0%
!! AATTTAAAAAGTTAAACTCA+CGG - chr3.3:93860913-93860932 MS.gene69347:intron 15.0%
!! ATATTACATATTATATGCAT+CGG + chr3.3:93860841-93860860 None:intergenic 15.0%
!! CATAAATATTATATGTTGTA+AGG + chr3.3:93863581-93863600 None:intergenic 15.0%
!! GAAATTGAAACATAAAATAT+AGG + chr3.3:93858754-93858773 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+CGG + chr3.3:93859835-93859854 None:intergenic 15.0%
!! TTTATCTATCAAAATGAAAA+AGG - chr3.3:93859107-93859126 MS.gene69347:intron 15.0%
!!! ATGATTTTCAATTTTCTTAA+AGG - chr3.3:93864671-93864690 MS.gene69347:intron 15.0%
!!! TTAAACAATCCTTATTTATT+TGG - chr3.3:93864127-93864146 MS.gene69347:intron 15.0%
!! AAATGTTACACAATCAATAT+TGG - chr3.3:93861208-93861227 MS.gene69347:intron 20.0%
!! AATTATTTCAATGTGTAGTA+TGG - chr3.3:93864315-93864334 MS.gene69347:intron 20.0%
!! AGGAATTTATTAACATTATG+TGG - chr3.3:93862756-93862775 MS.gene69347:intron 20.0%
!! AGTTAGAAACAACAAAAATT+GGG + chr3.3:93864641-93864660 None:intergenic 20.0%
!! ATGAAATAGCTATAAAAAGA+AGG + chr3.3:93860550-93860569 None:intergenic 20.0%
!! ATTTAAAAAGTTAAACTCAC+GGG - chr3.3:93860914-93860933 MS.gene69347:intron 20.0%
!! CTATTGTAAAACAAAAAAAC+CGG - chr3.3:93861973-93861992 MS.gene69347:intron 20.0%
!! CTTAAATTCGTATAAAGAAA+TGG + chr3.3:93860949-93860968 None:intergenic 20.0%
!! CTTTATACGAATTTAAGAAA+TGG - chr3.3:93860952-93860971 MS.gene69347:intron 20.0%
!! GATAATCTAATTCATATCTT+TGG - chr3.3:93859359-93859378 MS.gene69347:intron 20.0%
!! TAGTCATTTATTTAAAGAGT+AGG + chr3.3:93863556-93863575 None:intergenic 20.0%
!! TATTCATTCACTAAACAATA+TGG - chr3.3:93860577-93860596 MS.gene69347:CDS 20.0%
!! TATTGTAAAACAAAAAAACC+GGG - chr3.3:93861974-93861993 MS.gene69347:intron 20.0%
!! TCAAATTTGTGTATTTAAAC+CGG - chr3.3:93862668-93862687 MS.gene69347:intron 20.0%
!! TTAAAAATGAAAGAAAGATG+TGG + chr3.3:93861134-93861153 None:intergenic 20.0%
!! TTAAATCCACATTTCTTAAA+CGG + chr3.3:93860217-93860236 None:intergenic 20.0%
!! TTAAGTATCTTAAAACTTGT+AGG + chr3.3:93861836-93861855 None:intergenic 20.0%
!! TTACAAATGCCAAATAAATA+AGG + chr3.3:93864139-93864158 None:intergenic 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG + chr3.3:93859795-93859814 None:intergenic 20.0%
!!! GCAAGAAGTTTTTTTTTTTT+TGG + chr3.3:93862279-93862298 None:intergenic 20.0%
!!! TTAGAATGTATTTTTTCATC+CGG + chr3.3:93862690-93862709 None:intergenic 20.0%
! AAACGCGTAAATAAAATTGT+TGG + chr3.3:93864791-93864810 None:intergenic 25.0%
! AATACTAGTACTAGTATAGT+TGG + chr3.3:93861691-93861710 None:intergenic 25.0%
! AATTAAATACGTAGTCAGAT+CGG + chr3.3:93861519-93861538 None:intergenic 25.0%
! ACACTAATCACATGATTATT+TGG + chr3.3:93859042-93859061 None:intergenic 25.0%
! ACATTTAAATGTGAAGAAGT+GGG - chr3.3:93860797-93860816 MS.gene69347:intron 25.0%
! ACCATTAGTAAGAATATTTG+GGG + chr3.3:93861387-93861406 None:intergenic 25.0%
! ACTAATGGTCAAAATTTGAT+TGG - chr3.3:93861398-93861417 MS.gene69347:intron 25.0%
! AGGTATTAATGTTACTAGTT+GGG - chr3.3:93859333-93859352 MS.gene69347:intron 25.0%
! AGTAAAAGGTTAATTGATGA+TGG + chr3.3:93859570-93859589 None:intergenic 25.0%
! ATCCATATAAATTCTTCAAC+TGG - chr3.3:93858619-93858638 MS.gene69347:CDS 25.0%
! ATTAATTGTATCATACCGTA+TGG + chr3.3:93860520-93860539 None:intergenic 25.0%
! CAGTTAGAAACAACAAAAAT+TGG + chr3.3:93864642-93864661 None:intergenic 25.0%
! CATATAACAAACATTCAAAG+TGG + chr3.3:93859140-93859159 None:intergenic 25.0%
! GACCATTAGTAAGAATATTT+GGG + chr3.3:93861388-93861407 None:intergenic 25.0%
! GATTGTTTCAAACATAAGTA+AGG - chr3.3:93861016-93861035 MS.gene69347:intron 25.0%
! GTTAGAAACAACAAAAATTG+GGG + chr3.3:93864640-93864659 None:intergenic 25.0%
! GTTTCTATATTTAACCTTTC+CGG - chr3.3:93864591-93864610 MS.gene69347:CDS 25.0%
! TAAACAGTTATGATAAGTGA+GGG - chr3.3:93860029-93860048 MS.gene69347:intron 25.0%
! TAGGTATTAATGTTACTAGT+TGG - chr3.3:93859332-93859351 MS.gene69347:intron 25.0%
! TATCAGTTGAGTTAAACTTA+TGG - chr3.3:93860864-93860883 MS.gene69347:intron 25.0%
! TGACCATTAGTAAGAATATT+TGG + chr3.3:93861389-93861408 None:intergenic 25.0%
! TTATGGTACTTAATGGAATT+AGG - chr3.3:93859313-93859332 MS.gene69347:intron 25.0%
! TTCCAGTTGAAGAATTTATA+TGG + chr3.3:93858624-93858643 None:intergenic 25.0%
! TTTACTCTCTTCAATTCAAT+CGG + chr3.3:93859454-93859473 None:intergenic 25.0%
! TTTCAAACATAAGTAAGGAA+TGG - chr3.3:93861021-93861040 MS.gene69347:intron 25.0%
!! AGGAATTTACAAAAGTTGAT+AGG + chr3.3:93862301-93862320 None:intergenic 25.0%
!! ATCAATTACTTGAACTTTTG+TGG - chr3.3:93862559-93862578 MS.gene69347:intron 25.0%
!! CAAAATTGCACATTTTCAAA+TGG + chr3.3:93859796-93859815 None:intergenic 25.0%
!! CTTATGTTTGAAACAATCTA+CGG + chr3.3:93861014-93861033 None:intergenic 25.0%
!! TAACCTTTTACTATTTTCGT+TGG - chr3.3:93859578-93859597 MS.gene69347:CDS 25.0%
!! TATCATTTTGTTCGATATAG+AGG + chr3.3:93862522-93862541 None:intergenic 25.0%
!!! AAGTTTTTTTTTCTGAGAGA+AGG + chr3.3:93862321-93862340 None:intergenic 25.0%
!!! GTTTTGAATTCGAAAGTTAA+GGG + chr3.3:93863037-93863056 None:intergenic 25.0%
AAAATGAAAGAAAGATGTGG+TGG + chr3.3:93861131-93861150 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG + chr3.3:93859820-93859839 None:intergenic 30.0%
AAATGAAAGAAAGATGTGGT+GGG + chr3.3:93861130-93861149 None:intergenic 30.0%
AACACTTACGCTTTACATTA+TGG - chr3.3:93859532-93859551 MS.gene69347:CDS 30.0%
AACTTTCAATGTAATACAGC+GGG - chr3.3:93861594-93861613 MS.gene69347:intron 30.0%
AAGCTATGATCCATAATTTC+AGG - chr3.3:93863648-93863667 MS.gene69347:intron 30.0%
AATAGCTATAAAAAGAAGGC+AGG + chr3.3:93860546-93860565 None:intergenic 30.0%
AATGGTCAAAATTTGATTGG+CGG - chr3.3:93861401-93861420 MS.gene69347:intron 30.0%
ACATAGTAGCAGTGTTTAAT+CGG - chr3.3:93864542-93864561 MS.gene69347:CDS 30.0%
ACGTTGAATGATAATCCATT+AGG + chr3.3:93862865-93862884 None:intergenic 30.0%
ATATGACTCTAGCTAAATAG+TGG - chr3.3:93859155-93859174 MS.gene69347:intron 30.0%
ATTAATGTTACTAGTTGGGA+GGG - chr3.3:93859337-93859356 MS.gene69347:intron 30.0%
ATTTAATTGAATGAAACCGC+AGG - chr3.3:93860231-93860250 MS.gene69347:CDS 30.0%
ATTTCAATGTGTAGTATGGA+TGG - chr3.3:93864319-93864338 MS.gene69347:intron 30.0%
CACATGATTATGGTACTTAA+TGG - chr3.3:93859306-93859325 MS.gene69347:intron 30.0%
CACATTTAAATGTGAAGAAG+TGG - chr3.3:93860796-93860815 MS.gene69347:intron 30.0%
CACTTATATACTTCAAGTGA+AGG - chr3.3:93860334-93860353 MS.gene69347:CDS 30.0%
CCACTAAATTCATGTAATAC+AGG + chr3.3:93860132-93860151 None:intergenic 30.0%
CCATTAGTAAGAATATTTGG+GGG + chr3.3:93861386-93861405 None:intergenic 30.0%
CCTGTATTACATGAATTTAG+TGG - chr3.3:93860129-93860148 MS.gene69347:CDS 30.0%
CTAATGAGCATTAAAGTGAA+AGG + chr3.3:93864073-93864092 None:intergenic 30.0%
GAACTTTCAATGTAATACAG+CGG - chr3.3:93861593-93861612 MS.gene69347:intron 30.0%
GTAAACAGTTATGATAAGTG+AGG - chr3.3:93860028-93860047 MS.gene69347:intron 30.0%
TAAACACTGCTACTATGTAT+AGG + chr3.3:93864540-93864559 None:intergenic 30.0%
TAAAGAGTAGGAATCGAATT+CGG + chr3.3:93863544-93863563 None:intergenic 30.0%
TAACAAGAAAGCAACCATTA+TGG - chr3.3:93859384-93859403 MS.gene69347:intron 30.0%
TACAGGGTATATTGATCAAT+GGG - chr3.3:93858808-93858827 MS.gene69347:intron 30.0%
TATTAATGTTACTAGTTGGG+AGG - chr3.3:93859336-93859355 MS.gene69347:intron 30.0%
TCAACTGTGTCAAGTATTAT+AGG - chr3.3:93859993-93860012 MS.gene69347:intron 30.0%
TTACAGGGTATATTGATCAA+TGG - chr3.3:93858807-93858826 MS.gene69347:intron 30.0%
TTATCATTCAACGTTGAACA+AGG - chr3.3:93862871-93862890 MS.gene69347:intron 30.0%
TTCAATTGATATTGTGTCTC+TGG - chr3.3:93864262-93864281 MS.gene69347:intron 30.0%
TTTAAACGAGACAGTTTCTA+TGG - chr3.3:93862147-93862166 MS.gene69347:intron 30.0%
TTTGTAACAGAATGAATGTC+TGG + chr3.3:93858846-93858865 None:intergenic 30.0%
! AGTATTGAATCTGTAACGTT+TGG - chr3.3:93861705-93861724 MS.gene69347:intron 30.0%
! TAAAGGTATATCCCTATTCA+TGG - chr3.3:93864688-93864707 MS.gene69347:intron 30.0%
! TAAGGTTAGTCCTGAAATTA+TGG + chr3.3:93863661-93863680 None:intergenic 30.0%
! TTCAACTGGAATGTTACTTA+CGG - chr3.3:93858633-93858652 MS.gene69347:CDS 30.0%
!! AATTGATGATGGATTATGGA+TGG + chr3.3:93859559-93859578 None:intergenic 30.0%
!! ATTAGTGTTGACACACTTAA+GGG - chr3.3:93859054-93859073 MS.gene69347:CDS 30.0%
!! ATTGATGATGGATTATGGAT+GGG + chr3.3:93859558-93859577 None:intergenic 30.0%
!! GAAAAAAGAGTACTAGAAAC+TGG - chr3.3:93861325-93861344 MS.gene69347:intron 30.0%
!! GGTTAATTGATGATGGATTA+TGG + chr3.3:93859563-93859582 None:intergenic 30.0%
!! TGTTGAAGACATTGATAATG+AGG + chr3.3:93858875-93858894 None:intergenic 30.0%
!!! GGTTTTGAATTCGAAAGTTA+AGG + chr3.3:93863038-93863057 None:intergenic 30.0%
AAAAACAAGTGAACCAGATC+TGG + chr3.3:93859235-93859254 None:intergenic 35.0%
AAGCATCACATGAAAACTCA+CGG + chr3.3:93862194-93862213 None:intergenic 35.0%
AAGTGAAATACCTGATTGAG+CGG + chr3.3:93863326-93863345 None:intergenic 35.0%
AATCTTAGAGGAGAATCTTG+TGG + chr3.3:93863199-93863218 None:intergenic 35.0%
ACTGAACCGTTTAAGAAATG+TGG - chr3.3:93860208-93860227 MS.gene69347:CDS 35.0%
ACTTGTACCAATCACCAATA+AGG + chr3.3:93860493-93860512 None:intergenic 35.0%
ACTTTCAATGTAATACAGCG+GGG - chr3.3:93861595-93861614 MS.gene69347:intron 35.0%
AGACAGTTTCTATGGTTATC+CGG - chr3.3:93862155-93862174 MS.gene69347:intron 35.0%
AGACTTAGGATATCAAACGT+GGG - chr3.3:93863000-93863019 MS.gene69347:CDS 35.0%
ATAAATAGCCGTCCATGAAT+AGG + chr3.3:93864703-93864722 None:intergenic 35.0%
ATGAACTACGCGTTCAATAT+TGG - chr3.3:93861184-93861203 MS.gene69347:intron 35.0%
ATGTTTGTTTGATGCTGATG+TGG - chr3.3:93859078-93859097 MS.gene69347:CDS 35.0%
ATTCCGACAATATGCCATAA+TGG + chr3.3:93859401-93859420 None:intergenic 35.0%
ATTGAAAGCCCATCTTGATA+AGG - chr3.3:93862792-93862811 MS.gene69347:intron 35.0%
ATTGTATCATACCGTATGGT+TGG + chr3.3:93860516-93860535 None:intergenic 35.0%
CAACCATTATGGCATATTGT+CGG - chr3.3:93859395-93859414 MS.gene69347:intron 35.0%
CACAACAAAGACAATCATTC+TGG - chr3.3:93863736-93863755 MS.gene69347:intron 35.0%
CAGCCAACGAAAATAGTAAA+AGG + chr3.3:93859584-93859603 None:intergenic 35.0%
CAGGAAAGACTTATAGACTT+AGG - chr3.3:93862986-93863005 MS.gene69347:CDS 35.0%
CATATCTACAATTGCCCTTT+GGG + chr3.3:93860174-93860193 None:intergenic 35.0%
CCCCCAAATATTCTTACTAA+TGG - chr3.3:93861383-93861402 MS.gene69347:intron 35.0%
CTGTGTCAAGTATTATAGGA+AGG - chr3.3:93859997-93860016 MS.gene69347:intron 35.0%
CTTCAAGTGAAGGATCAAAT+TGG - chr3.3:93860344-93860363 MS.gene69347:CDS 35.0%
CTTCTTTCCCTTATCAAGAT+GGG + chr3.3:93862803-93862822 None:intergenic 35.0%
GAGACACAATATCAGTAACA+TGG + chr3.3:93864205-93864224 None:intergenic 35.0%
GCTGATTACTTCAAAATCTC+CGG - chr3.3:93863845-93863864 MS.gene69347:intron 35.0%
GTAACTAACCAACTAGTAAC+TGG + chr3.3:93864474-93864493 None:intergenic 35.0%
GTCAAGTATTATAGGAAGGA+GGG - chr3.3:93860001-93860020 MS.gene69347:intron 35.0%
GTTAATGGCAAGCAAAGATA+TGG - chr3.3:93863776-93863795 MS.gene69347:intron 35.0%
GTTGGTCGTTATGTAATGTA+AGG - chr3.3:93859496-93859515 MS.gene69347:CDS 35.0%
TAAATAGCCGTCCATGAATA+GGG + chr3.3:93864702-93864721 None:intergenic 35.0%
TAATATGATTCTCACCTGAG+TGG + chr3.3:93864407-93864426 None:intergenic 35.0%
TAGACTTAGGATATCAAACG+TGG - chr3.3:93862999-93863018 MS.gene69347:CDS 35.0%
TATCACCATTTGTACACAAC+AGG - chr3.3:93862967-93862986 MS.gene69347:CDS 35.0%
TCAAAACCACAAACTGAAGT+TGG - chr3.3:93863050-93863069 MS.gene69347:CDS 35.0%
TCACATAACAGAAAGAAAGC+CGG + chr3.3:93864613-93864632 None:intergenic 35.0%
TCCTTACAGATTACAGAACT+GGG + chr3.3:93862740-93862759 None:intergenic 35.0%
TCTTTCCTGTTGTGTACAAA+TGG + chr3.3:93862975-93862994 None:intergenic 35.0%
TGTCAAGTATTATAGGAAGG+AGG - chr3.3:93860000-93860019 MS.gene69347:intron 35.0%
TGTTACTGATATTGTGTCTC+TGG - chr3.3:93864205-93864224 MS.gene69347:intron 35.0%
TTCAAATGGGTCATCTATTG+CGG + chr3.3:93859782-93859801 None:intergenic 35.0%
TTCAATTCAATCGGTACCTT+AGG + chr3.3:93859445-93859464 None:intergenic 35.0%
TTCCTTACAGATTACAGAAC+TGG + chr3.3:93862741-93862760 None:intergenic 35.0%
TTGAAAGCCCATCTTGATAA+GGG - chr3.3:93862793-93862812 MS.gene69347:intron 35.0%
TTGTACCATGAGATGAGAAA+GGG + chr3.3:93858909-93858928 None:intergenic 35.0%
TTGTGTTTATGAGACCGTAA+TGG + chr3.3:93863721-93863740 None:intergenic 35.0%
! AAGAACTACTCGACTTTTTG+TGG - chr3.3:93861074-93861093 MS.gene69347:intron 35.0%
! AGAGCAAAAGCACATGATTA+TGG - chr3.3:93859296-93859315 MS.gene69347:intron 35.0%
! GAACAATGTTCTCGTTGTTT+TGG + chr3.3:93863976-93863995 None:intergenic 35.0%
!! AACTTTAAAACACATGCACC+CGG + chr3.3:93861995-93862014 None:intergenic 35.0%
!! GATTAGTGTTGACACACTTA+AGG - chr3.3:93859053-93859072 MS.gene69347:CDS 35.0%
!! GCTACTCTTTCTTTGTTGTT+GGG - chr3.3:93864014-93864033 MS.gene69347:intron 35.0%
!! GTGCTTTTGCTCTTTTAGAA+AGG + chr3.3:93859289-93859308 None:intergenic 35.0%
AAATGTGTGGACACTAGACA+CGG - chr3.3:93859207-93859226 MS.gene69347:intron 40.0%
AAGTAATCAGCGAGCTTAAG+AGG + chr3.3:93863836-93863855 None:intergenic 40.0%
ACAATGTAGTAGTCCTGAGA+AGG + chr3.3:93863171-93863190 None:intergenic 40.0%
ACACATTTGATCCAGCACAT+GGG + chr3.3:93859195-93859214 None:intergenic 40.0%
ACTCTCAATTTAGCTGCTGT+TGG - chr3.3:93858543-93858562 MS.gene69347:CDS 40.0%
AGAAGGAACTCATTCGAAGA+TGG - chr3.3:93860269-93860288 MS.gene69347:CDS 40.0%
AGTAGCAACACATAGAAGCA+AGG + chr3.3:93858571-93858590 None:intergenic 40.0%
AGTGAAATACCTGATTGAGC+GGG + chr3.3:93863325-93863344 None:intergenic 40.0%
ATATAAGTGAAGTTCCTCCC+TGG + chr3.3:93860323-93860342 None:intergenic 40.0%
ATGAACCCTTTCTCATCTCA+TGG - chr3.3:93858901-93858920 MS.gene69347:intron 40.0%
ATTGAATGAAACCGCAGGAA+TGG - chr3.3:93860236-93860255 MS.gene69347:CDS 40.0%
CCAAAGGGCAATTGTAGATA+TGG - chr3.3:93860172-93860191 MS.gene69347:CDS 40.0%
CCAACTACAACAACTACTTC+TGG + chr3.3:93859481-93859500 None:intergenic 40.0%
CCAGAAGTAGTTGTTGTAGT+TGG - chr3.3:93859478-93859497 MS.gene69347:CDS 40.0%
CCATATCTACAATTGCCCTT+TGG + chr3.3:93860175-93860194 None:intergenic 40.0%
CTACTATGTATAGGACAGCT+AGG + chr3.3:93864531-93864550 None:intergenic 40.0%
CTCATTCGAAGATGGTGTTT+CGG - chr3.3:93860277-93860296 MS.gene69347:CDS 40.0%
CTTCTACCAACTTCAGTTTG+TGG + chr3.3:93863059-93863078 None:intergenic 40.0%
CTTGTACCATGAGATGAGAA+AGG + chr3.3:93858910-93858929 None:intergenic 40.0%
GACAGTTTCTATGGTTATCC+GGG - chr3.3:93862156-93862175 MS.gene69347:intron 40.0%
GACCAATCAACTTGGATTGT+AGG + chr3.3:93863291-93863310 None:intergenic 40.0%
GAGTAGGTGGTAAGCTATAA+TGG + chr3.3:93859622-93859641 None:intergenic 40.0%
GATCTTCAGCTGAAGTAATG+TGG + chr3.3:93858602-93858621 None:intergenic 40.0%
GCTTCTTTCCCTTATCAAGA+TGG + chr3.3:93862804-93862823 None:intergenic 40.0%
GGAGATTACACTGTCCTTAT+TGG - chr3.3:93860476-93860495 MS.gene69347:intron 40.0%
GGCATATTGTCGGAATTATG+TGG - chr3.3:93859405-93859424 MS.gene69347:intron 40.0%
GGTAGAAGAAACTACTCCTA+AGG - chr3.3:93859426-93859445 MS.gene69347:CDS 40.0%
GGTATATCCCTATTCATGGA+CGG - chr3.3:93864692-93864711 MS.gene69347:intron 40.0%
GGTTCAAAGACCAATCAACT+TGG + chr3.3:93863299-93863318 None:intergenic 40.0%
GTTCAGAGCTATCATCTTGA+TGG - chr3.3:93863992-93864011 MS.gene69347:intron 40.0%
GTTTATGAGACCGTAATGGT+AGG + chr3.3:93863717-93863736 None:intergenic 40.0%
TAACAGAAAGAAAGCCGGAA+AGG + chr3.3:93864608-93864627 None:intergenic 40.0%
TATGTATAGGACAGCTAGGT+AGG + chr3.3:93864527-93864546 None:intergenic 40.0%
TATGTTGCACTTGACAACGT+TGG - chr3.3:93864720-93864739 MS.gene69347:intron 40.0%
TCAAATGGGTCATCTATTGC+GGG + chr3.3:93859781-93859800 None:intergenic 40.0%
TCAATGTGTAGTATGGATGG+AGG - chr3.3:93864322-93864341 MS.gene69347:intron 40.0%
TCACAGATGTGTCAAGGTAA+AGG + chr3.3:93863916-93863935 None:intergenic 40.0%
TCACGGACAAAATTTGAACC+CGG + chr3.3:93862177-93862196 None:intergenic 40.0%
TCATTCGAAGATGGTGTTTC+GGG - chr3.3:93860278-93860297 MS.gene69347:CDS 40.0%
TCCCAGTTCTGTAATCTGTA+AGG - chr3.3:93862736-93862755 MS.gene69347:intron 40.0%
TCCTCACTTGATGTTCATGT+GGG - chr3.3:93863111-93863130 MS.gene69347:CDS 40.0%
TGGACAACTTCTAGCAGAAA+CGG - chr3.3:93864349-93864368 MS.gene69347:intron 40.0%
TGTTTGATGCTGATGTGGAT+TGG - chr3.3:93859083-93859102 MS.gene69347:CDS 40.0%
TTCTCAGGACTACTACATTG+TGG - chr3.3:93863170-93863189 MS.gene69347:CDS 40.0%
TTGAATGAAACCGCAGGAAT+GGG - chr3.3:93860237-93860256 MS.gene69347:CDS 40.0%
TTGATCAATGGGCAATTTCC+TGG - chr3.3:93858819-93858838 MS.gene69347:intron 40.0%
TTGGTACAAGTCCAACCATA+CGG - chr3.3:93860502-93860521 MS.gene69347:intron 40.0%
TTTGCTGGCAAATTACGAAG+TGG - chr3.3:93861348-93861367 MS.gene69347:intron 40.0%
! AAAAGTGGCGCATGTGATTT+TGG + chr3.3:93859658-93859677 None:intergenic 40.0%
! ACACTGTCCTTATTGGTGAT+TGG - chr3.3:93860483-93860502 MS.gene69347:intron 40.0%
! GGCTACTCTTTCTTTGTTGT+TGG - chr3.3:93864013-93864032 MS.gene69347:intron 40.0%
! TGATTTTGGACAAACCGAGA+TGG + chr3.3:93859644-93859663 None:intergenic 40.0%
! TTTTTGTTCCTGAGCCCAAA+GGG - chr3.3:93860157-93860176 MS.gene69347:CDS 40.0%
!! AGACGTGCATTCTTTGGAAT+AGG + chr3.3:93864846-93864865 None:intergenic 40.0%
!! AGTACTAGAAACTGGTTTGC+TGG - chr3.3:93861333-93861352 MS.gene69347:intron 40.0%
!! CAAACTGAAGTTGGTAGAAG+TGG - chr3.3:93863059-93863078 MS.gene69347:CDS 40.0%
!! GACCTACAATCCAAGTTGAT+TGG - chr3.3:93863286-93863305 MS.gene69347:intron 40.0%
!! GCTTTCTGAAATGCTAGAGA+TGG + chr3.3:93860386-93860405 None:intergenic 40.0%
!!! CATTTTGAGTTGTGTGCCAA+GGG - chr3.3:93861475-93861494 MS.gene69347:intron 40.0%
!!! TTTTTTGTTCCTGAGCCCAA+AGG - chr3.3:93860156-93860175 MS.gene69347:CDS 40.0%
AACTGCTGATCAACCTTCTC+AGG - chr3.3:93863155-93863174 MS.gene69347:CDS 45.0%
ACAGAATGAATGTCTGGACC+AGG + chr3.3:93858840-93858859 None:intergenic 45.0%
ACGTTGGAATGTGGAACTTG+AGG - chr3.3:93864736-93864755 MS.gene69347:intron 45.0%
AGGAAACTCGTCTCTGATTG+AGG + chr3.3:93864826-93864845 None:intergenic 45.0%
AGGACTAACCTTACAGCAAG+TGG - chr3.3:93863668-93863687 MS.gene69347:intron 45.0%
ATACTGTCGTGCCCAAAACT+CGG + chr3.3:93864763-93864782 None:intergenic 45.0%
ATCAATGGTCGTGGACCTAA+TGG - chr3.3:93862847-93862866 MS.gene69347:intron 45.0%
ATCGACTACTCCTTAACCAC+GGG - chr3.3:93863462-93863481 MS.gene69347:intron 45.0%
CACACATTTGATCCAGCACA+TGG + chr3.3:93859196-93859215 None:intergenic 45.0%
CACTTGACAACGTTGGAATG+TGG - chr3.3:93864727-93864746 MS.gene69347:intron 45.0%
CATGTGCTGGATCAAATGTG+TGG - chr3.3:93859194-93859213 MS.gene69347:intron 45.0%
CCACAAGGATCCTACCATTA+CGG - chr3.3:93863704-93863723 MS.gene69347:intron 45.0%
CCTTGGCACACAACTCAAAA+TGG + chr3.3:93861477-93861496 None:intergenic 45.0%
CGTAATGGTAGGATCCTTGT+GGG + chr3.3:93863706-93863725 None:intergenic 45.0%
CTAGCATTTCAGAAAGCAGC+TGG - chr3.3:93860389-93860408 MS.gene69347:CDS 45.0%
CTCCTCACTTGATGTTCATG+TGG - chr3.3:93863110-93863129 MS.gene69347:CDS 45.0%
CTCTTAAGCAAGTTGCCAAG+CGG - chr3.3:93861541-93861560 MS.gene69347:intron 45.0%
CTTGCATCACAGATGTGTCA+AGG + chr3.3:93863922-93863941 None:intergenic 45.0%
GATCGACTACTCCTTAACCA+CGG - chr3.3:93863461-93863480 MS.gene69347:intron 45.0%
GCAAACGACCAGTTACTAGT+TGG - chr3.3:93864463-93864482 MS.gene69347:intron 45.0%
GGACAACTTCTAGCAGAAAC+GGG - chr3.3:93864350-93864369 MS.gene69347:intron 45.0%
GGGAAAGGAACTGGAATTCT+AGG + chr3.3:93860446-93860465 None:intergenic 45.0%
GTAGTCAGATCGGATAGAAG+AGG + chr3.3:93861509-93861528 None:intergenic 45.0%
TAAGATTCTCACCACCACTG+CGG - chr3.3:93863212-93863231 MS.gene69347:intron 45.0%
TACGGTGACATTTACCCACT+TGG - chr3.3:93858651-93858670 MS.gene69347:CDS 45.0%
TATACTCCCTCAGTGTCCAT+GGG + chr3.3:93862446-93862465 None:intergenic 45.0%
TCAGATCGGATAGAAGAGGA+GGG + chr3.3:93861505-93861524 None:intergenic 45.0%
TCCCACATGAACATCAAGTG+AGG + chr3.3:93863115-93863134 None:intergenic 45.0%
TCTAATGAGTGATCACCGCT+TGG + chr3.3:93861559-93861578 None:intergenic 45.0%
TTATACTCCCTCAGTGTCCA+TGG + chr3.3:93862447-93862466 None:intergenic 45.0%
! AAAGAAAGATGTGGTGGGAG+TGG + chr3.3:93861125-93861144 None:intergenic 45.0%
! AACATCAAGTGAGGAGTACG+TGG + chr3.3:93863106-93863125 None:intergenic 45.0%
! AAGAAAGATGTGGTGGGAGT+GGG + chr3.3:93861124-93861143 None:intergenic 45.0%
! AGTGGTGGTGAGAATCTTAG+AGG + chr3.3:93863211-93863230 None:intergenic 45.0%
! GAACTTGAGGACCGAGTTTT+GGG - chr3.3:93864749-93864768 MS.gene69347:intron 45.0%
! GAGGCATTAGGATACTCAGT+AGG - chr3.3:93860420-93860439 MS.gene69347:CDS 45.0%
! TAGGTCCACGACCATTGATT+AGG + chr3.3:93862846-93862865 None:intergenic 45.0%
! TGTAATCTCCAGCTGGTTCA+GGG + chr3.3:93860466-93860485 None:intergenic 45.0%
! TTTTGGGCACGACAGTATCT+TGG - chr3.3:93864765-93864784 MS.gene69347:CDS 45.0%
!! CTGAAGTTGGTAGAAGTGGA+AGG - chr3.3:93863063-93863082 MS.gene69347:CDS 45.0%
!!! CCATTTTGAGTTGTGTGCCA+AGG - chr3.3:93861474-93861493 MS.gene69347:intron 45.0%
!! AAAAATTACAATAAAAAAAA+TGG - chr3.3:93860723-93860742 MS.gene69347:intron 5.0%
!! AAATTAACTTATAAAAATAT+GGG - chr3.3:93861854-93861873 MS.gene69347:intron 5.0%
!! TAAATTAACTTATAAAAATA+TGG - chr3.3:93861853-93861872 MS.gene69347:intron 5.0%
!!! TAATTAATATTTTATTTTTC+TGG - chr3.3:93861771-93861790 MS.gene69347:intron 5.0%
!!! TTTTTTATTTAATTTTTACA+GGG - chr3.3:93858792-93858811 MS.gene69347:intron 5.0%
!!! TTTTTTTATTTAATTTTTAC+AGG - chr3.3:93858791-93858810 MS.gene69347:intron 5.0%
AAGTGAAGTTCCTCCCTGGT+GGG + chr3.3:93860319-93860338 None:intergenic 50.0%
ACAAACCGAGATGGAGTAGG+TGG + chr3.3:93859635-93859654 None:intergenic 50.0%
ACCCACTTGGAGTTCGTCAA+AGG - chr3.3:93858664-93858683 MS.gene69347:CDS 50.0%
ACCCTTTGACGAACTCCAAG+TGG + chr3.3:93858669-93858688 None:intergenic 50.0%
ACCTTACAGCAAGTGGACCA+AGG - chr3.3:93863675-93863694 MS.gene69347:intron 50.0%
ACTAGACACGGATCCAGATC+TGG - chr3.3:93859219-93859238 MS.gene69347:intron 50.0%
ACTTGGATTGTAGGTCCACC+AGG + chr3.3:93863282-93863301 None:intergenic 50.0%
AGAAGAGGAGGGTTATCCCT+TGG + chr3.3:93861494-93861513 None:intergenic 50.0%
AGAATGCACGTCTCTGTGGT+AGG - chr3.3:93864853-93864872 MS.gene69347:CDS 50.0%
AGCATATCTGAGAGACCCAC+TGG - chr3.3:93863884-93863903 MS.gene69347:intron 50.0%
AGCTCTCCTGGTCAGGTTAA+TGG - chr3.3:93863761-93863780 MS.gene69347:intron 50.0%
AGGACAGTGTAATCTCCAGC+TGG + chr3.3:93860473-93860492 None:intergenic 50.0%
ATACTCCCTCAGTGTCCATG+GGG + chr3.3:93862445-93862464 None:intergenic 50.0%
ATATCTGAGAGACCCACTGG+TGG - chr3.3:93863887-93863906 MS.gene69347:intron 50.0%
ATGGGTCATCTATTGCGGGA+CGG + chr3.3:93859777-93859796 None:intergenic 50.0%
CACTAAAGTCTCCCATGTGC+TGG - chr3.3:93859181-93859200 MS.gene69347:intron 50.0%
CCAAAGAATGCACGTCTCTG+TGG - chr3.3:93864849-93864868 MS.gene69347:CDS 50.0%
CCACAGAGACGTGCATTCTT+TGG + chr3.3:93864852-93864871 None:intergenic 50.0%
CCCACTTGGAGTTCGTCAAA+GGG - chr3.3:93858665-93858684 MS.gene69347:CDS 50.0%
CCCTTTGACGAACTCCAAGT+GGG + chr3.3:93858668-93858687 None:intergenic 50.0%
CCGTAATGGTAGGATCCTTG+TGG + chr3.3:93863707-93863726 None:intergenic 50.0%
CGAATGAGTTCCTTCTCTGC+TGG + chr3.3:93860265-93860284 None:intergenic 50.0%
CTTCGCTATAGCAACTCTGC+AGG - chr3.3:93863237-93863256 MS.gene69347:intron 50.0%
CTTGGATTGTAGGTCCACCA+GGG + chr3.3:93863281-93863300 None:intergenic 50.0%
GAATGCACGTCTCTGTGGTA+GGG - chr3.3:93864854-93864873 MS.gene69347:CDS 50.0%
GCATTTCAGAAAGCAGCTGG+CGG - chr3.3:93860392-93860411 MS.gene69347:CDS 50.0%
GCTTACCACCTACTCCATCT+CGG - chr3.3:93859627-93859646 MS.gene69347:CDS 50.0%
GCTTCCAACGCGAAAAACAC+CGG + chr3.3:93863867-93863886 None:intergenic 50.0%
GTAGTATGGATGGAGGACAG+TGG - chr3.3:93864329-93864348 MS.gene69347:intron 50.0%
GTCAGATCGGATAGAAGAGG+AGG + chr3.3:93861506-93861525 None:intergenic 50.0%
TAAGTGAAGTTCCTCCCTGG+TGG + chr3.3:93860320-93860339 None:intergenic 50.0%
TACAATTGCCCTTTGGGCTC+AGG + chr3.3:93860168-93860187 None:intergenic 50.0%
TCGACTACTCCTTAACCACG+GGG - chr3.3:93863463-93863482 MS.gene69347:intron 50.0%
TGCTTGCCATTAACCTGACC+AGG + chr3.3:93863770-93863789 None:intergenic 50.0%
TGGACAAACCGAGATGGAGT+AGG + chr3.3:93859638-93859657 None:intergenic 50.0%
TGGTAGGATCCTTGTGGGTT+AGG + chr3.3:93863701-93863720 None:intergenic 50.0%
TTGGATTGTAGGTCCACCAG+GGG + chr3.3:93863280-93863299 None:intergenic 50.0%
! AATACCTGATTGAGCGGGCT+TGG + chr3.3:93863320-93863339 None:intergenic 50.0%
! AGAAAGATGTGGTGGGAGTG+GGG + chr3.3:93861123-93861142 None:intergenic 50.0%
! ATCATTCTGGCTAGCTCTCC+TGG - chr3.3:93863749-93863768 MS.gene69347:intron 50.0%
! ATCTCCGGTGTTTTTCGCGT+TGG - chr3.3:93863860-93863879 MS.gene69347:intron 50.0%
! CGCTTGGCAACTTGCTTAAG+AGG + chr3.3:93861543-93861562 None:intergenic 50.0%
! GGAACTTGAGGACCGAGTTT+TGG - chr3.3:93864748-93864767 MS.gene69347:intron 50.0%
! GTGTAATCTCCAGCTGGTTC+AGG + chr3.3:93860467-93860486 None:intergenic 50.0%
!! TTCGTTGGCTGTTAGCTTGC+TGG - chr3.3:93859593-93859612 MS.gene69347:CDS 50.0%
AACTCTGCAGGCGCAGTATC+AGG - chr3.3:93863249-93863268 MS.gene69347:intron 55.0%
AAGGTAAAGGCCACCACCAG+TGG + chr3.3:93863903-93863922 None:intergenic 55.0%
AAGTTCCTCCCTGGTGGGAT+GGG + chr3.3:93860314-93860333 None:intergenic 55.0%
AGGTAAAGGCCACCACCAGT+GGG + chr3.3:93863902-93863921 None:intergenic 55.0%
CGACTACTCCTTAACCACGG+GGG - chr3.3:93863464-93863483 MS.gene69347:intron 55.0%
GGAATGGGATCCAGCAGAGA+AGG - chr3.3:93860252-93860271 MS.gene69347:CDS 55.0%
GTCATCTATTGCGGGACGGA+GGG + chr3.3:93859773-93859792 None:intergenic 55.0%
GTCTCTGTGGTAGGGCAAGT+GGG - chr3.3:93864862-93864881 MS.gene69347:CDS 55.0%
GTTCCTTTCCCTGAACCAGC+TGG - chr3.3:93860455-93860474 MS.gene69347:intron 55.0%
TCTGCTGGATCCCATTCCTG+CGG + chr3.3:93860250-93860269 None:intergenic 55.0%
TGAACCAAGCCCGCTCAATC+AGG - chr3.3:93863313-93863332 MS.gene69347:intron 55.0%
TGGATTGTAGGTCCACCAGG+GGG + chr3.3:93863279-93863298 None:intergenic 55.0%
! CAGAAAGCAGCTGGCGGTTT+TGG - chr3.3:93860398-93860417 MS.gene69347:CDS 55.0%
! CGAGCTTAAGAGGCGTGTCT+GGG + chr3.3:93863826-93863845 None:intergenic 55.0%
! GCTGGTTCAGGGAAAGGAAC+TGG + chr3.3:93860455-93860474 None:intergenic 55.0%
! TCTCCAGCTGGTTCAGGGAA+AGG + chr3.3:93860461-93860480 None:intergenic 55.0%
!! AAAGCAGCTGGCGGTTTTGG+AGG - chr3.3:93860401-93860420 MS.gene69347:CDS 55.0%
!! GATCCTTGTGGGTTAGGCCT+TGG + chr3.3:93863695-93863714 None:intergenic 55.0%
!! GCCTTGGTCCACTTGCTGTA+AGG + chr3.3:93863679-93863698 None:intergenic 55.0%
!!! CTGGCGGTTTTGGAGGCATT+AGG - chr3.3:93860408-93860427 MS.gene69347:CDS 55.0%
ACAACATGCCCCATCCCACC+AGG - chr3.3:93860302-93860321 MS.gene69347:CDS 60.0%
AGTAGCGCGTTGCACCACTC+AGG - chr3.3:93864390-93864409 MS.gene69347:intron 60.0%
AGTTCCTCCCTGGTGGGATG+GGG + chr3.3:93860313-93860332 None:intergenic 60.0%
ATTGTAGGTCCACCAGGGGG+TGG + chr3.3:93863276-93863295 None:intergenic 60.0%
CAACATGCCCCATCCCACCA+GGG - chr3.3:93860303-93860322 MS.gene69347:CDS 60.0%
CGTCTCTGTGGTAGGGCAAG+TGG - chr3.3:93864861-93864880 MS.gene69347:CDS 60.0%
GAAGTTCCTCCCTGGTGGGA+TGG + chr3.3:93860315-93860334 None:intergenic 60.0%
GCACTAGACCCCCGTGGTTA+AGG + chr3.3:93863475-93863494 None:intergenic 60.0%
GGACCAAGGCCTAACCCACA+AGG - chr3.3:93863689-93863708 MS.gene69347:intron 60.0%
GGTCATCTATTGCGGGACGG+AGG + chr3.3:93859774-93859793 None:intergenic 60.0%
TCTGAGAGACCCACTGGTGG+TGG - chr3.3:93863890-93863909 MS.gene69347:intron 60.0%
TTGTAGGTCCACCAGGGGGT+GGG + chr3.3:93863275-93863294 None:intergenic 60.0%
! GCGAGCTTAAGAGGCGTGTC+TGG + chr3.3:93863827-93863846 None:intergenic 60.0%
! TCTGGCTAGCTCTCCTGGTC+AGG - chr3.3:93863754-93863773 MS.gene69347:intron 60.0%
!! ATAGCGAAGCACCGCAGTGG+TGG + chr3.3:93863226-93863245 None:intergenic 60.0%
!! GCTATAGCGAAGCACCGCAG+TGG + chr3.3:93863229-93863248 None:intergenic 60.0%
CCACGGGGGTCTAGTGCAAG+TGG - chr3.3:93863478-93863497 MS.gene69347:intron 65.0%
CCACTTGCACTAGACCCCCG+TGG + chr3.3:93863481-93863500 None:intergenic 65.0%
CTCCCTCAGTGTCCATGGGG+CGG + chr3.3:93862442-93862461 None:intergenic 65.0%
TGCCGCCCCATGGACACTGA+GGG - chr3.3:93862437-93862456 MS.gene69347:intron 65.0%
CATGCCCCATCCCACCAGGG+AGG - chr3.3:93860306-93860325 MS.gene69347:CDS 70.0%
CTACCTCTGCTGCCGCCCCA+TGG - chr3.3:93862427-93862446 MS.gene69347:intron 70.0%
CTGCCGCCCCATGGACACTG+AGG - chr3.3:93862436-93862455 MS.gene69347:intron 70.0%
GCAGTATCAGGCCCACCCCC+TGG - chr3.3:93863261-93863280 MS.gene69347:intron 70.0%
GTATCAGGCCCACCCCCTGG+TGG - chr3.3:93863264-93863283 MS.gene69347:intron 70.0%
TGTCCATGGGGCGGCAGCAG+AGG + chr3.3:93862433-93862452 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 93858540 93864905 93858540 ID=MS.gene69347
chr3.3 mRNA 93858540 93864905 93858540 ID=MS.gene69347.t1;Parent=MS.gene69347
chr3.3 exon 93864759 93864905 93864759 ID=MS.gene69347.t1.exon1;Parent=MS.gene69347.t1
chr3.3 CDS 93864759 93864905 93864759 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93864523 93864632 93864523 ID=MS.gene69347.t1.exon2;Parent=MS.gene69347.t1
chr3.3 CDS 93864523 93864632 93864523 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93862922 93863192 93862922 ID=MS.gene69347.t1.exon3;Parent=MS.gene69347.t1
chr3.3 CDS 93862922 93863192 93862922 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93860553 93860655 93860553 ID=MS.gene69347.t1.exon4;Parent=MS.gene69347.t1
chr3.3 CDS 93860553 93860655 93860553 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93860111 93860456 93860111 ID=MS.gene69347.t1.exon5;Parent=MS.gene69347.t1
chr3.3 CDS 93860111 93860456 93860111 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93859410 93859775 93859410 ID=MS.gene69347.t1.exon6;Parent=MS.gene69347.t1
chr3.3 CDS 93859410 93859775 93859410 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93859034 93859112 93859034 ID=MS.gene69347.t1.exon7;Parent=MS.gene69347.t1
chr3.3 CDS 93859034 93859112 93859034 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
chr3.3 exon 93858540 93858752 93858540 ID=MS.gene69347.t1.exon8;Parent=MS.gene69347.t1
chr3.3 CDS 93858540 93858752 93858540 ID=cds.MS.gene69347.t1;Parent=MS.gene69347.t1
Gene Sequence

>MS.gene69347

ATGACTCTCAATTTAGCTGCTGTTGGAGCCTTGCTTCTATGTGTTGCTACTTCTTTGTTCCACATTACTTCAGCTGAAGATCCATATAAATTCTTCAACTGGAATGTTACTTACGGTGACATTTACCCACTTGGAGTTCGTCAAAGGGTACGTGTGTTTCATGTCAAATCAAATCTCAATCTCACTCACTTTCTCATGCTTTTGTTTTCTTCCTATATTTTATGTTTCAATTTCATAACACTAACTCCATTTTTTTTTATTTAATTTTTACAGGGTATATTGATCAATGGGCAATTTCCTGGTCCAGACATTCATTCTGTTACAAACGACAACCTCATTATCAATGTCTTCAACAGTTTGAATGAACCCTTTCTCATCTCATGGTACAAGCTCTTTTTCTCTGTTCAAATATTTACATTATTAGCACTTTCAATCTACCATTTTAAAATTGATTTATAAGTAACAATATAAAACTCAAAGCACAAAAAGTTAATTAAAACCAAATAATCATGTGATTAGTGTTGACACACTTAAGGGTATGTTTGTTTGATGCTGATGTGGATTGGATTTATCTATCAAAATGAAAAAGGCAATTCTCCACTTTGAATGTTTGTTATATGACTCTAGCTAAATAGTGGCAGCACTAAAGTCTCCCATGTGCTGGATCAAATGTGTGGACACTAGACACGGATCCAGATCTGGTTCACTTGTTTTTTCATTCTTATTTATTTTTGTCACATTTTTTTCCTTTCTAAAAGAGCAAAAGCACATGATTATGGTACTTAATGGAATTAGGTATTAATGTTACTAGTTGGGAGGGATAATCTAATTCATATCTTTGGACTAACAAGAAAGCAACCATTATGGCATATTGTCGGAATTATGTGGTAGAAGAAACTACTCCTAAGGTACCGATTGAATTGAAGAGAGTAAAGTTTCCAGAAGTAGTTGTTGTAGTTGGTCGTTATGTAATGTAAGGTTGAAAAAAACGCAACACTTACGCTTTACATTATGGCCCATCCATAATCCATCATCAATTAACCTTTTACTATTTTCGTTGGCTGTTAGCTTGCTGGAATCCATTATAGCTTACCACCTACTCCATCTCGGTTTGTCCAAAATCACATGCGCCACTTTTTAAATGTTTTAATTTTAAAAAAAGTTACTAAAATTATTTGTTAAAAAAAGTTTTTTAATTTAGAAATTATTTTCATAAACTTTTTAAATACTCCCTCCGTCCCGCAATAGATGACCCATTTGAAAATGTGCAATTTTGACCTAACTTACTTTGACCGTATTTTTCTACTAATATACAAAGATAAATAATATCATATAAGATGTCGTTAGATTCGTCTCAATGAATATTGTCAAAATATCAAATTTTCATAATTTTCTCTAATATATTATTCAAGATATTTAAGCTCAAAGTTATGCATTGACATGCGTAATAAGATCAACTGTGTCAAGTATTATAGGAAGGAGGGAGTAGTAAACAGTTATGATAAGTGAGGGTGAATCTGTTAATGAAAGTTTACAAGCACAGTACTTTTTTATGATTGTAAAAATAGTACGTAATTTTTTTTTTTATTCCTGTATTACATGAATTTAGTGGTAGATTTTTTGTTCCTGAGCCCAAAGGGCAATTGTAGATATGGCAATGTGACAACAACTGAACCGTTTAAGAAATGTGGATTTAATTGAATGAAACCGCAGGAATGGGATCCAGCAGAGAAGGAACTCATTCGAAGATGGTGTTTCGGGAACAACATGCCCCATCCCACCAGGGAGGAACTTCACTTATATACTTCAAGTGAAGGATCAAATTGGAAGCTTTTACTACTTTCCATCTCTAGCATTTCAGAAAGCAGCTGGCGGTTTTGGAGGCATTAGGATACTCAGTAGGCCTAGAATTCCAGTTCCTTTCCCTGAACCAGCTGGAGATTACACTGTCCTTATTGGTGATTGGTACAAGTCCAACCATACGGTATGATACAATTAATTAACCTGCCTTCTTTTTATAGCTATTTCATTCTCATATATTCATTCACTAAACAATATGGTAATAATATTTATTTAAAGACAATTTTTCTTAAAATAATATATTTTAATGAGAAGAAATATTTTTAAATTAAATAAGTCAAATATTTTTATCGATCAAACGATCACGCTTGACTGACAACAAGAAAAATTACAATAAAAAAAATGGTACAAAAATTAAATTATATTTTTATTTTTTTGTCAAGTAGTCAGCGCTCACACATTTAAATGTGAAGAAGTGGGATGTCTGAGATTCGAACTCCGATGCATATAATATGTAATATCACTATCAGTTGAGTTAAACTTATGGAGATTCTATTTTCATTTCTTTATATGAATTTAAAAAGTTAAACTCACGGGATTCTATTTCCATTTCTTTATACGAATTTAAGAAATGGTACAAAAATTAAGTTCTATTTTCATTTCTTTATATACCGTAGATTGTTTCAAACATAAGTAAGGAATGGATTCAAATGATCTGCAAGCTAGTAAAAAACAAGAACTACTCGACTTTTTGTGGTCTAGTCTCTATCATATAGTAGTCCCCACTCCCACCACATCTTTCTTTCATTTTTAAAATGAATTTTTTTACAAGGAATTTTTTAAAATGAACTACGCGTTCAATATTGGAAAATGTTACACAATCAATATTGGAAAATTTTAACATTTGATTGTGTAACATTTTTTAAAATGAACTACGCGTTCAATATTAGAAGTACTAGAAACTGAATTTTCAAAAAAAAGAAAAGAAAAAAGAGTACTAGAAACTGGTTTGCTGGCAAATTACGAAGTGGTTACAGTTTCATCCCCCAAATATTCTTACTAATGGTCAAAATTTGATTGGCGGCAATGAAACACATTTACTCGTTCATGACAAATTGCATTTGTTTTTTCATTCCATTTTGAGTTGTGTGCCAAGGGATAACCCTCCTCTTCTATCCGATCTGACTACGTATTTAATTGCCTCTTAAGCAAGTTGCCAAGCGGTGATCACTCATTAGAGACTTCTTGAATTTGAACTTTCAATGTAATACAGCGGGGACGACAGACACGCTGTGAATTTGATATTCACATAGCAAATGACTCATAAGCTAACTTATACGCTCATATTCCAACTATACTAGTACTAGTATTGAATCTGTAACGTTTGGCTAAACTGACTTATAAATATGAAAATACATACAATAATGTATTTAATTAATATTTTATTTTTCTGGATTTAGATTACAAGAATAAAATTGAGAGAAAAATGATAACCTACAAGTTTTAAGATACTTAAATTAACTTATAAAAATATGGGATAAGATAATATAATAAAGCTATAAATTTGTGAGAAAATGACAGATACTAATAGAGTCTTTTTTAATCATATGAATTTATAAGCTATAAAACTCAACTATTGTAAAACAAAAAAACCGGGTGCATGTGTTTTAAAGTTAATTTATGAGTGTAATTTTTACTATCGTAAGCATAAAAATGTTCTATATATGTATTTATTTATTTATTAATGTGTTACTACAGTAAAAAATATGTGTTGCTAGAATACGATAAATTAGTACTAGTATGTGTTTTTAAACGAGACAGTTTCTATGGTTATCCGGGTTCAAATTTTGTCCGTGAGTTTTCATGTGATGCTTATTACTTCTTCTGACAAAAAATAATTCATGCAAAATTTTTTTGTAACTTATTACTATTTCAGCCAAAAAAAAAAAAACTTCTTGCCTATCAACTTTTGTAAATTCCTTCTCTCAGAAAAAAAAACTTCTGTTAATTCCTTATATAAAAAAAAAAACTGTTTTTTAATTTATTATTTAAAAAAACTTTTCTTGGCTAAAAAATACTATTGACTTCTACCTCTGCTGCCGCCCCATGGACACTGAGGGAGTATAAGTTTACTTATACTAGTACACTATTATTACATATTACGTATTAATACTAACTACCTCTATATCGAACAAAATGATACTCTTTGAAAACAATAAATCAATTACTTGAACTTTTGTGGATTAGTGCTATATTTTGACTTAAATTTTCTAATCTTATCAAATTTTAAATGAAGTTTTCTTTTTGTTGCTTAAAACAAAAATCACATCAAATTTGTGTATTTAAACCGGATGAAAAAATACATTCTAAATTATTATGTGATTCAACTTCAATTCTCCCAGTTCTGTAATCTGTAAGGAATTTATTAACATTATGTGGATGTTATGCAGACATTGAAAGCCCATCTTGATAAGGGAAAGAAGCTTCCTATACCTGATGGAGTCCTAATCAATGGTCGTGGACCTAATGGATTATCATTCAACGTTGAACAAGGTATGCAATAATTAAATTAAATAAAAAGAAAATGTTGTATTAAACACACAAATAAATAATCTTGTTTTAATGCTTATCACCATTTGTACACAACAGGAAAGACTTATAGACTTAGGATATCAAACGTGGGATTGCAACATTCCCTTAACTTTCGAATTCAAAACCACAAACTGAAGTTGGTAGAAGTGGAAGGAACACACACACTTCAAACCACGTACTCCTCACTTGATGTTCATGTGGGACAATCTTACTCAGTGCTAGTAACTGCTGATCAACCTTCTCAGGACTACTACATTGTGGCTTCCACAAGATTCTCCTCTAAGATTCTCACCACCACTGCGGTGCTTCGCTATAGCAACTCTGCAGGCGCAGTATCAGGCCCACCCCCTGGTGGACCTACAATCCAAGTTGATTGGTCTTTGAACCAAGCCCGCTCAATCAGGTATTTCACTTTTAAGCTGTTTTGAATAATATCTACATTGTTGTTTTACAAAATTAAGTATGTTTGAATATAAAAATTAACTAATTGAATCATTAATTTAGTATCTAAAATTCAACTATGAGCTCAGATCGACTACTCCTTAACCACGGGGGTCTAGTGCAAGTGGTTCATGCACAGTTTGTATGAGTGCTGTAAATTCTAAGATACCGAATTCGATTCCTACTCTTTAAATAAATGACTACTCCTTACAACATATAATATTTATGTTGTTTGTATGATTCAGTTACAGTGCATGAAATGATTATTGTGACTCAAGCTATGATCCATAATTTCAGGACTAACCTTACAGCAAGTGGACCAAGGCCTAACCCACAAGGATCCTACCATTACGGTCTCATAAACACAACAAAGACAATCATTCTGGCTAGCTCTCCTGGTCAGGTTAATGGCAAGCAAAGATATGGAATAAACAGTGTGTCTTATGTTGTCCCAGACACGCCTCTTAAGCTCGCTGATTACTTCAAAATCTCCGGTGTTTTTCGCGTTGGAAGCATATCTGAGAGACCCACTGGTGGTGGCCTTTACCTTGACACATCTGTGATGCAAGCTGATTACAGATCTTTTGTTGAGATTGTCTTCCAAAACAACGAGAACATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGGTGAGCACACTGCACATATATAACTTCTACTTATCCTTTCACTTTAATGCTCATTAGTTATTTACTTATATTTTTAAATATTACAATTTCTTTAAACAATCCTTATTTATTTGGCATTTGTAACTGTAACATGTTTTTTACTTTTGTAAAAGAAGTATATAAACTACCATGTTACTGATATTGTGTCTCTGGAATTTCTAAAATAACACTTTGTGACTTAAATTATTTCAATTGATATTGTGTCTCTGGTATTTCTAAAATTTATCACTTTGTGACTTAAATTATTTCAATGTGTAGTATGGATGGAGGACAGTGGACAACTTCTAGCAGAAACGGGTACAATCTTCGAGATGCAGTAGCGCGTTGCACCACTCAGGTGAGAATCATATTATATAGTTGTTATTGAGTAGAGTTAGTAATTCAGAATGCAAACGACCAGTTACTAGTTGGTTAGTTACTTACACGTTCAGTTTGTTGATTTACAACTACCTACCTAGCTGTCCTATACATAGTAGCAGTGTTTAATCGGTGTGTGAGACTCTTGAATAAAAATTTGTTTCTATATTTAACCTTTCCGGCTTTCTTTCTGTTATGTGAGATTCCCCAATTTTTGTTGTTTCTAACTGATGCAATATATGATTTTCAATTTTCTTAAAGGTATATCCCTATTCATGGACGGCTATTTATGTTGCACTTGACAACGTTGGAATGTGGAACTTGAGGACCGAGTTTTGGGCACGACAGTATCTTGGCCAACAATTTTATTTACGCGTTTACACAGCATCAACCTCAATCAGAGACGAGTTTCCTATTCCAAAGAATGCACGTCTCTGTGGTAGGGCAAGTGGGAGACATACCCGCCCCCTTTGA
Protein sequence

>MS.gene69347.t1

MTLNLAAVGALLLCVATSLFHITSAEDPYKFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLNEPFLISWNGIQQRRNSFEDGVSGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLAFQKAAGGFGGIRILSRPRIPVPFPEPAGDYTVLIGDWYKSNHTTLKAHLDKGKKLPIPDGVLINGRGPNGLSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPSQDYYIVASTRFSSKILTTTAVLRYSNSAGAVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSPGQVNGKQRYGINSVSYVVPDTPLKLADYFKISGVFRVGSISERPTGGGLYLDTSVMQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNGYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGRASGRHTRPL