Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28548.t1 | XP_013446472.1 | 97.2 | 541 | 14 | 1 | 1 | 541 | 1 | 540 | 0.00E+00 | 1087 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28548.t1 | P29162 | 50.4 | 540 | 256 | 5 | 10 | 538 | 8 | 546 | 4.4e-164 | 579.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28548.t1 | A0A072TSL7 | 97.2 | 541 | 14 | 1 | 1 | 541 | 1 | 540 | 0.0e+00 | 1087.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04926 | MS.gene28548 | 0.823285 | 1.50E-53 | -1.69E-46 |
| MS.gene04932 | MS.gene28548 | 0.812606 | 3.89E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene28548 | 0.874435 | 6.77E-68 | -1.69E-46 |
| MS.gene050095 | MS.gene28548 | 0.807466 | 4.99E-50 | -1.69E-46 |
| MS.gene050096 | MS.gene28548 | 0.810299 | 1.23E-50 | -1.69E-46 |
| MS.gene050133 | MS.gene28548 | 0.802637 | 5.10E-49 | -1.69E-46 |
| MS.gene050329 | MS.gene28548 | 0.857271 | 1.83E-62 | -1.69E-46 |
| MS.gene050344 | MS.gene28548 | 0.820283 | 7.44E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene28548 | 0.804526 | 2.07E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene28548 | 0.809132 | 2.20E-50 | -1.69E-46 |
| MS.gene050809 | MS.gene28548 | 0.806594 | 7.63E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene28548 | 0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene28548 | 0.822012 | 2.97E-53 | -1.69E-46 |
| MS.gene051158 | MS.gene28548 | 0.847889 | 8.69E-60 | -1.69E-46 |
| MS.gene051552 | MS.gene28548 | 0.802687 | 4.98E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene28548 | 0.819174 | 1.33E-52 | -1.69E-46 |
| MS.gene051996 | MS.gene28548 | 0.852054 | 5.94E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene28548 | 0.804187 | 2.44E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene28548 | -0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene28548 | -0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene28548 | 0.862372 | 5.31E-64 | -1.69E-46 |
| MS.gene052212 | MS.gene28548 | 0.814441 | 1.54E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene28548 | 0.861059 | 1.34E-63 | -1.69E-46 |
| MS.gene05240 | MS.gene28548 | 0.857128 | 2.02E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene28548 | -0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene05244 | MS.gene28548 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene28548 | -0.803703 | 3.07E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene28548 | -0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene052606 | MS.gene28548 | 0.803316 | 3.70E-49 | -1.69E-46 |
| MS.gene052702 | MS.gene28548 | 0.824653 | 7.18E-54 | -1.69E-46 |
| MS.gene052705 | MS.gene28548 | 0.831573 | 1.55E-55 | -1.69E-46 |
| MS.gene052706 | MS.gene28548 | 0.82803 | 1.13E-54 | -1.69E-46 |
| MS.gene053031 | MS.gene28548 | 0.807858 | 4.12E-50 | -1.69E-46 |
| MS.gene053403 | MS.gene28548 | 0.816607 | 5.07E-52 | -1.69E-46 |
| MS.gene053406 | MS.gene28548 | 0.86777 | 1.07E-65 | -1.69E-46 |
| MS.gene054102 | MS.gene28548 | -0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene054138 | MS.gene28548 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene28548 | 0.841587 | 4.34E-58 | -1.69E-46 |
| MS.gene054147 | MS.gene28548 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene054181 | MS.gene28548 | 0.807601 | 4.67E-50 | -1.69E-46 |
| MS.gene054277 | MS.gene28548 | 0.884359 | 2.05E-71 | -1.69E-46 |
| MS.gene054290 | MS.gene28548 | 0.814544 | 1.46E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene28548 | 0.894913 | 1.58E-75 | -1.69E-46 |
| MS.gene054884 | MS.gene28548 | 0.816018 | 6.87E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene28548 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene055240 | MS.gene28548 | 0.837597 | 4.73E-57 | -1.69E-46 |
| MS.gene055595 | MS.gene28548 | 0.800731 | 1.26E-48 | -1.69E-46 |
| MS.gene055597 | MS.gene28548 | 0.808259 | 3.38E-50 | -1.69E-46 |
| MS.gene055601 | MS.gene28548 | 0.831424 | 1.68E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene28548 | 0.828494 | 8.72E-55 | -1.69E-46 |
| MS.gene056218 | MS.gene28548 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene28548 | 0.880077 | 7.39E-70 | -1.69E-46 |
| MS.gene056590 | MS.gene28548 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene28548 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene056680 | MS.gene28548 | 0.85072 | 1.42E-60 | -1.69E-46 |
| MS.gene056690 | MS.gene28548 | 0.81687 | 4.43E-52 | -1.69E-46 |
| MS.gene056691 | MS.gene28548 | 0.815308 | 9.88E-52 | -1.69E-46 |
| MS.gene056715 | MS.gene28548 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene28548 | 0.811905 | 5.54E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene28548 | 0.829205 | 5.86E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene28548 | 0.883091 | 6.01E-71 | -1.69E-46 |
| MS.gene056922 | MS.gene28548 | 0.84927 | 3.60E-60 | -1.69E-46 |
| MS.gene056923 | MS.gene28548 | 0.831146 | 1.97E-55 | -1.69E-46 |
| MS.gene056924 | MS.gene28548 | 0.830382 | 3.03E-55 | -1.69E-46 |
| MS.gene056925 | MS.gene28548 | 0.802156 | 6.41E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene28548 | -0.816391 | 5.66E-52 | -1.69E-46 |
| MS.gene057261 | MS.gene28548 | 0.832465 | 9.31E-56 | -1.69E-46 |
| MS.gene057544 | MS.gene28548 | 0.835624 | 1.51E-56 | -1.69E-46 |
| MS.gene058177 | MS.gene28548 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene28548 | 0.827944 | 1.18E-54 | -1.69E-46 |
| MS.gene058381 | MS.gene28548 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene058450 | MS.gene28548 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene28548 | 0.819675 | 1.03E-52 | -1.69E-46 |
| MS.gene059043 | MS.gene28548 | 0.823259 | 1.53E-53 | -1.69E-46 |
| MS.gene059265 | MS.gene28548 | 0.803754 | 3.00E-49 | -1.69E-46 |
| MS.gene059328 | MS.gene28548 | 0.807548 | 4.79E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene28548 | 0.818785 | 1.64E-52 | -1.69E-46 |
| MS.gene059891 | MS.gene28548 | 0.839616 | 1.42E-57 | -1.69E-46 |
| MS.gene059892 | MS.gene28548 | 0.847691 | 9.85E-60 | -1.69E-46 |
| MS.gene059953 | MS.gene28548 | 0.840858 | 6.75E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene28548 | 0.866411 | 2.91E-65 | -1.69E-46 |
| MS.gene060087 | MS.gene28548 | 0.89517 | 1.24E-75 | -1.69E-46 |
| MS.gene061038 | MS.gene28548 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene061092 | MS.gene28548 | 0.855303 | 6.91E-62 | -1.69E-46 |
| MS.gene061094 | MS.gene28548 | 0.859791 | 3.24E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041141 | MS.gene28548 | PPI |
| MS.gene064814 | MS.gene28548 | PPI |
| MS.gene52790 | MS.gene28548 | PPI |
| MS.gene014367 | MS.gene28548 | PPI |
| MS.gene87345 | MS.gene28548 | PPI |
| MS.gene28548 | MS.gene28549 | PPI |
| MS.gene011878 | MS.gene28548 | PPI |
| MS.gene28548 | MS.gene71379 | PPI |
| MS.gene27107 | MS.gene28548 | PPI |
| MS.gene28548 | MS.gene88938 | PPI |
| MS.gene28548 | MS.gene24091 | PPI |
| MS.gene28548 | MS.gene88984 | PPI |
| MS.gene28548 | MS.gene44956 | PPI |
| MS.gene28548 | MS.gene047683 | PPI |
| MS.gene69347 | MS.gene28548 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28548.t1 | MTR_8g479380 | 97.227 | 541 | 14 | 1 | 1 | 541 | 1 | 540 | 0.0 | 1081 |
| MS.gene28548.t1 | MTR_8g479390 | 66.016 | 512 | 173 | 1 | 24 | 535 | 26 | 536 | 0.0 | 730 |
| MS.gene28548.t1 | MTR_5g018270 | 66.732 | 514 | 167 | 3 | 22 | 535 | 24 | 533 | 0.0 | 707 |
| MS.gene28548.t1 | MTR_4g132320 | 59.586 | 532 | 213 | 2 | 5 | 535 | 7 | 537 | 0.0 | 639 |
| MS.gene28548.t1 | MTR_4g049390 | 57.310 | 513 | 217 | 2 | 24 | 535 | 22 | 533 | 0.0 | 628 |
| MS.gene28548.t1 | MTR_4g075690 | 54.291 | 536 | 240 | 3 | 1 | 535 | 4 | 535 | 0.0 | 621 |
| MS.gene28548.t1 | MTR_4g048350 | 56.530 | 513 | 220 | 3 | 24 | 535 | 22 | 532 | 0.0 | 613 |
| MS.gene28548.t1 | MTR_3g115050 | 56.140 | 513 | 223 | 2 | 24 | 535 | 25 | 536 | 0.0 | 606 |
| MS.gene28548.t1 | MTR_1g026410 | 56.311 | 515 | 223 | 2 | 22 | 535 | 22 | 535 | 0.0 | 606 |
| MS.gene28548.t1 | MTR_2g088080 | 56.140 | 513 | 223 | 2 | 24 | 535 | 25 | 536 | 0.0 | 595 |
| MS.gene28548.t1 | MTR_4g083190 | 50.370 | 540 | 259 | 4 | 9 | 540 | 7 | 545 | 0.0 | 553 |
| MS.gene28548.t1 | MTR_3g083440 | 48.699 | 538 | 267 | 4 | 11 | 540 | 7 | 543 | 0.0 | 535 |
| MS.gene28548.t1 | MTR_3g083390 | 48.513 | 538 | 268 | 4 | 11 | 540 | 7 | 543 | 0.0 | 534 |
| MS.gene28548.t1 | MTR_3g083430 | 48.513 | 538 | 268 | 4 | 11 | 540 | 7 | 543 | 0.0 | 532 |
| MS.gene28548.t1 | MTR_4g083210 | 48.876 | 534 | 268 | 4 | 11 | 540 | 7 | 539 | 0.0 | 531 |
| MS.gene28548.t1 | MTR_3g083400 | 48.513 | 538 | 268 | 4 | 11 | 540 | 7 | 543 | 0.0 | 531 |
| MS.gene28548.t1 | MTR_3g083450 | 49.245 | 530 | 260 | 4 | 19 | 540 | 16 | 544 | 0.0 | 529 |
| MS.gene28548.t1 | MTR_4g075690 | 54.464 | 448 | 199 | 3 | 1 | 447 | 4 | 447 | 0.0 | 518 |
| MS.gene28548.t1 | MTR_2g088080 | 54.386 | 456 | 206 | 2 | 81 | 535 | 1 | 455 | 3.06e-176 | 505 |
| MS.gene28548.t1 | MTR_4g101650 | 48.925 | 558 | 257 | 9 | 7 | 540 | 4 | 557 | 1.15e-175 | 508 |
| MS.gene28548.t1 | MTR_3g083410 | 48.497 | 499 | 248 | 4 | 50 | 540 | 10 | 507 | 5.10e-168 | 486 |
| MS.gene28548.t1 | MTR_3g008580 | 47.170 | 530 | 253 | 7 | 34 | 540 | 34 | 559 | 1.08e-165 | 483 |
| MS.gene28548.t1 | MTR_7g051440 | 46.057 | 558 | 265 | 10 | 14 | 540 | 4 | 556 | 5.43e-159 | 466 |
| MS.gene28548.t1 | MTR_1g090707 | 45.491 | 499 | 257 | 7 | 50 | 536 | 45 | 540 | 3.83e-144 | 428 |
| MS.gene28548.t1 | MTR_4g133150 | 56.311 | 206 | 70 | 3 | 135 | 337 | 23 | 211 | 1.72e-65 | 212 |
| MS.gene28548.t1 | MTR_3g078740 | 26.679 | 551 | 321 | 16 | 52 | 533 | 49 | 585 | 5.93e-49 | 179 |
| MS.gene28548.t1 | MTR_5g020600 | 28.229 | 542 | 311 | 20 | 9 | 498 | 17 | 532 | 7.65e-49 | 177 |
| MS.gene28548.t1 | MTR_4g015120 | 27.203 | 522 | 337 | 13 | 13 | 498 | 9 | 523 | 2.38e-48 | 176 |
| MS.gene28548.t1 | MTR_5g069680 | 29.338 | 559 | 343 | 18 | 9 | 526 | 9 | 556 | 7.29e-48 | 175 |
| MS.gene28548.t1 | MTR_3g078700 | 26.969 | 508 | 325 | 17 | 52 | 533 | 49 | 536 | 1.20e-47 | 174 |
| MS.gene28548.t1 | MTR_5g081810 | 28.482 | 481 | 303 | 11 | 52 | 498 | 22 | 495 | 3.70e-47 | 172 |
| MS.gene28548.t1 | MTR_8g091390 | 26.678 | 566 | 339 | 16 | 24 | 536 | 29 | 571 | 1.37e-46 | 172 |
| MS.gene28548.t1 | MTR_5g020620 | 28.067 | 538 | 312 | 20 | 9 | 498 | 17 | 527 | 7.93e-46 | 169 |
| MS.gene28548.t1 | MTR_3g462760 | 27.190 | 548 | 344 | 16 | 21 | 526 | 20 | 554 | 7.80e-43 | 161 |
| MS.gene28548.t1 | MTR_3g078730 | 26.705 | 528 | 301 | 17 | 52 | 533 | 48 | 535 | 1.80e-42 | 160 |
| MS.gene28548.t1 | MTR_3g101640 | 27.385 | 566 | 362 | 16 | 9 | 527 | 7 | 570 | 9.15e-42 | 158 |
| MS.gene28548.t1 | MTR_5g073210 | 28.327 | 526 | 333 | 16 | 10 | 498 | 8 | 526 | 5.52e-41 | 155 |
| MS.gene28548.t1 | MTR_7g065980 | 27.256 | 543 | 339 | 17 | 10 | 505 | 11 | 544 | 3.32e-39 | 151 |
| MS.gene28548.t1 | MTR_8g027375 | 24.512 | 563 | 341 | 12 | 29 | 532 | 34 | 571 | 6.40e-38 | 147 |
| MS.gene28548.t1 | MTR_5g083360 | 27.355 | 552 | 322 | 19 | 5 | 498 | 3 | 533 | 6.63e-38 | 147 |
| MS.gene28548.t1 | MTR_7g065970 | 26.443 | 537 | 329 | 18 | 32 | 514 | 28 | 552 | 8.50e-37 | 144 |
| MS.gene28548.t1 | MTR_2g008330 | 26.389 | 504 | 327 | 14 | 50 | 512 | 59 | 559 | 7.96e-36 | 141 |
| MS.gene28548.t1 | MTR_3g101635 | 28.150 | 508 | 319 | 15 | 50 | 516 | 48 | 550 | 1.09e-35 | 140 |
| MS.gene28548.t1 | MTR_3g071890 | 27.168 | 519 | 326 | 17 | 50 | 524 | 54 | 564 | 5.78e-33 | 133 |
| MS.gene28548.t1 | MTR_4g019225 | 24.719 | 534 | 343 | 15 | 32 | 514 | 29 | 554 | 5.13e-31 | 127 |
| MS.gene28548.t1 | MTR_7g062250 | 25.331 | 529 | 330 | 17 | 22 | 498 | 29 | 544 | 1.76e-30 | 125 |
| MS.gene28548.t1 | MTR_7g058690 | 24.630 | 540 | 350 | 19 | 9 | 498 | 14 | 546 | 4.82e-29 | 121 |
| MS.gene28548.t1 | MTR_7g062310 | 26.157 | 497 | 314 | 16 | 50 | 498 | 68 | 559 | 5.28e-29 | 121 |
| MS.gene28548.t1 | MTR_7g060460 | 24.818 | 548 | 341 | 19 | 9 | 498 | 13 | 547 | 8.14e-29 | 120 |
| MS.gene28548.t1 | MTR_7g458880 | 24.900 | 502 | 315 | 19 | 50 | 498 | 54 | 546 | 1.17e-27 | 117 |
| MS.gene28548.t1 | MTR_4g064530 | 24.486 | 486 | 319 | 15 | 50 | 492 | 65 | 545 | 1.02e-25 | 111 |
| MS.gene28548.t1 | MTR_5g018290 | 67.742 | 62 | 20 | 0 | 474 | 535 | 5 | 66 | 2.86e-25 | 99.4 |
| MS.gene28548.t1 | MTR_4g064530 | 24.380 | 484 | 318 | 15 | 50 | 490 | 65 | 543 | 3.58e-24 | 106 |
| MS.gene28548.t1 | MTR_4g133160 | 39.623 | 106 | 50 | 2 | 414 | 519 | 1 | 92 | 1.03e-20 | 87.4 |
| MS.gene28548.t1 | MTR_5g081790 | 29.008 | 262 | 154 | 9 | 254 | 490 | 166 | 420 | 6.08e-13 | 71.2 |
| MS.gene28548.t1 | MTR_5g081790 | 30.348 | 201 | 120 | 7 | 6 | 192 | 1 | 195 | 9.85e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28548.t1 | AT4G37160 | 68.727 | 534 | 165 | 2 | 5 | 537 | 7 | 539 | 0.0 | 757 |
| MS.gene28548.t1 | AT2G23630 | 66.603 | 527 | 173 | 3 | 16 | 541 | 21 | 545 | 0.0 | 727 |
| MS.gene28548.t1 | AT2G23630 | 66.603 | 527 | 173 | 3 | 16 | 541 | 16 | 540 | 0.0 | 726 |
| MS.gene28548.t1 | AT5G66920 | 61.047 | 516 | 199 | 2 | 20 | 535 | 28 | 541 | 0.0 | 670 |
| MS.gene28548.t1 | AT4G37160 | 68.694 | 444 | 137 | 2 | 5 | 447 | 7 | 449 | 0.0 | 622 |
| MS.gene28548.t1 | AT4G22010 | 57.171 | 516 | 220 | 1 | 22 | 536 | 19 | 534 | 0.0 | 622 |
| MS.gene28548.t1 | AT1G76160 | 54.269 | 527 | 237 | 2 | 9 | 535 | 11 | 533 | 0.0 | 605 |
| MS.gene28548.t1 | AT1G41830 | 53.524 | 525 | 242 | 2 | 13 | 536 | 12 | 535 | 0.0 | 602 |
| MS.gene28548.t1 | AT1G21850 | 54.389 | 524 | 236 | 3 | 13 | 535 | 12 | 533 | 0.0 | 589 |
| MS.gene28548.t1 | AT1G21860 | 53.672 | 531 | 237 | 3 | 5 | 535 | 12 | 533 | 0.0 | 585 |
| MS.gene28548.t1 | AT4G38420 | 52.399 | 542 | 247 | 4 | 1 | 535 | 5 | 542 | 0.0 | 582 |
| MS.gene28548.t1 | AT1G55560 | 50.000 | 544 | 261 | 6 | 6 | 539 | 1 | 543 | 0.0 | 556 |
| MS.gene28548.t1 | AT3G13400 | 48.889 | 540 | 265 | 5 | 10 | 539 | 6 | 544 | 0.0 | 552 |
| MS.gene28548.t1 | AT3G13400 | 48.889 | 540 | 265 | 5 | 10 | 539 | 6 | 544 | 0.0 | 552 |
| MS.gene28548.t1 | AT1G55570 | 49.449 | 544 | 262 | 5 | 10 | 541 | 7 | 549 | 0.0 | 549 |
| MS.gene28548.t1 | AT4G28090 | 50.760 | 526 | 256 | 2 | 13 | 535 | 12 | 537 | 0.0 | 543 |
| MS.gene28548.t1 | AT3G13390 | 49.714 | 525 | 254 | 4 | 25 | 540 | 24 | 547 | 0.0 | 537 |
| MS.gene28548.t1 | AT4G12420 | 48.663 | 561 | 255 | 9 | 3 | 540 | 5 | 555 | 0.0 | 526 |
| MS.gene28548.t1 | AT4G12420 | 48.663 | 561 | 255 | 9 | 3 | 540 | 5 | 555 | 0.0 | 526 |
| MS.gene28548.t1 | AT4G38420 | 51.975 | 481 | 220 | 4 | 1 | 474 | 5 | 481 | 1.49e-176 | 507 |
| MS.gene28548.t1 | AT5G48450 | 48.603 | 537 | 258 | 8 | 18 | 540 | 18 | 550 | 4.63e-175 | 507 |
| MS.gene28548.t1 | AT5G48450 | 48.603 | 537 | 258 | 8 | 18 | 540 | 18 | 550 | 1.10e-174 | 507 |
| MS.gene28548.t1 | AT5G51480 | 47.495 | 539 | 260 | 9 | 23 | 540 | 22 | 558 | 4.87e-169 | 491 |
| MS.gene28548.t1 | AT1G75790 | 46.293 | 553 | 267 | 10 | 6 | 536 | 1 | 545 | 8.27e-169 | 489 |
| MS.gene28548.t1 | AT4G25240 | 48.556 | 554 | 256 | 10 | 10 | 540 | 11 | 558 | 1.25e-168 | 490 |
| MS.gene28548.t1 | AT4G25240 | 48.556 | 554 | 256 | 10 | 10 | 540 | 11 | 558 | 1.25e-168 | 490 |
| MS.gene28548.t1 | AT4G38420 | 52.423 | 454 | 205 | 4 | 1 | 447 | 5 | 454 | 6.24e-168 | 484 |
| MS.gene28548.t1 | AT5G21105 | 27.758 | 562 | 332 | 18 | 31 | 538 | 40 | 581 | 1.60e-53 | 191 |
| MS.gene28548.t1 | AT4G39830 | 26.027 | 584 | 361 | 16 | 9 | 536 | 13 | 581 | 2.79e-53 | 190 |
| MS.gene28548.t1 | AT5G21100 | 27.599 | 558 | 325 | 20 | 32 | 533 | 27 | 561 | 6.55e-53 | 189 |
| MS.gene28548.t1 | AT5G21105 | 28.210 | 514 | 300 | 17 | 31 | 490 | 40 | 538 | 6.61e-50 | 180 |
| MS.gene28548.t1 | AT5G58910 | 29.878 | 492 | 293 | 15 | 50 | 498 | 50 | 532 | 1.49e-47 | 174 |
| MS.gene28548.t1 | AT5G58910 | 29.301 | 529 | 320 | 16 | 13 | 498 | 16 | 533 | 1.62e-47 | 174 |
| MS.gene28548.t1 | AT2G38080 | 26.296 | 540 | 360 | 13 | 10 | 516 | 8 | 542 | 2.45e-47 | 173 |
| MS.gene28548.t1 | AT5G03260 | 29.109 | 505 | 310 | 16 | 50 | 516 | 47 | 541 | 7.73e-43 | 161 |
| MS.gene28548.t1 | AT5G58910 | 29.065 | 492 | 290 | 16 | 50 | 498 | 14 | 489 | 1.81e-42 | 159 |
| MS.gene28548.t1 | AT5G05390 | 26.903 | 565 | 364 | 15 | 9 | 532 | 9 | 565 | 5.65e-42 | 159 |
| MS.gene28548.t1 | AT5G01190 | 26.040 | 553 | 357 | 13 | 5 | 516 | 1 | 542 | 2.03e-41 | 157 |
| MS.gene28548.t1 | AT2G46570 | 27.326 | 516 | 313 | 13 | 29 | 496 | 32 | 533 | 1.70e-40 | 154 |
| MS.gene28548.t1 | AT5G01190 | 27.362 | 508 | 317 | 13 | 50 | 516 | 32 | 528 | 1.79e-40 | 154 |
| MS.gene28548.t1 | AT2G30210 | 27.368 | 570 | 356 | 18 | 10 | 532 | 12 | 570 | 2.16e-40 | 154 |
| MS.gene28548.t1 | AT5G09360 | 26.316 | 513 | 334 | 13 | 23 | 498 | 30 | 535 | 3.90e-39 | 150 |
| MS.gene28548.t1 | AT5G01050 | 25.993 | 554 | 341 | 18 | 34 | 534 | 33 | 570 | 1.59e-38 | 149 |
| MS.gene28548.t1 | AT4G39830 | 25.050 | 503 | 296 | 16 | 93 | 536 | 4 | 484 | 3.14e-38 | 147 |
| MS.gene28548.t1 | AT4G39830 | 25.050 | 503 | 296 | 16 | 93 | 536 | 6 | 486 | 3.17e-38 | 147 |
| MS.gene28548.t1 | AT1G18140 | 25.912 | 521 | 311 | 18 | 47 | 505 | 47 | 554 | 5.46e-38 | 147 |
| MS.gene28548.t1 | AT5G01040 | 26.923 | 546 | 315 | 21 | 2 | 492 | 10 | 526 | 2.24e-36 | 143 |
| MS.gene28548.t1 | AT5G48100 | 25.882 | 510 | 332 | 13 | 50 | 517 | 43 | 548 | 9.14e-35 | 138 |
| MS.gene28548.t1 | AT4G39830 | 24.056 | 503 | 288 | 16 | 93 | 536 | 6 | 473 | 2.59e-33 | 132 |
| MS.gene28548.t1 | AT3G09220 | 25.000 | 548 | 343 | 13 | 3 | 498 | 2 | 533 | 1.67e-32 | 131 |
| MS.gene28548.t1 | AT5G21105 | 27.143 | 350 | 224 | 9 | 207 | 538 | 54 | 390 | 2.25e-32 | 129 |
| MS.gene28548.t1 | AT2G40370 | 24.698 | 579 | 374 | 15 | 9 | 532 | 9 | 580 | 2.33e-31 | 128 |
| MS.gene28548.t1 | AT2G46570 | 26.856 | 458 | 273 | 13 | 87 | 496 | 5 | 448 | 2.83e-30 | 124 |
| MS.gene28548.t1 | AT2G29130 | 25.151 | 497 | 316 | 16 | 50 | 498 | 51 | 539 | 3.88e-28 | 119 |
| MS.gene28548.t1 | AT5G07130 | 30.225 | 311 | 196 | 9 | 6 | 299 | 4 | 310 | 2.39e-27 | 116 |
| MS.gene28548.t1 | AT5G60020 | 24.759 | 311 | 212 | 7 | 13 | 309 | 6 | 308 | 3.20e-24 | 107 |
| MS.gene28548.t1 | AT5G60020 | 24.012 | 329 | 228 | 7 | 13 | 327 | 6 | 326 | 3.30e-24 | 106 |
| MS.gene28548.t1 | AT5G60020 | 24.913 | 289 | 198 | 6 | 50 | 327 | 14 | 294 | 9.07e-23 | 102 |
| MS.gene28548.t1 | AT3G09220 | 23.884 | 448 | 276 | 11 | 102 | 498 | 3 | 436 | 3.96e-19 | 90.9 |
| MS.gene28548.t1 | AT5G07130 | 28.000 | 225 | 144 | 7 | 92 | 299 | 2 | 225 | 4.22e-13 | 72.0 |
| MS.gene28548.t1 | AT5G07130 | 28.000 | 225 | 144 | 7 | 92 | 299 | 2 | 225 | 4.22e-13 | 72.0 |
Find 149 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAACCACCAGCTGCTTTA+TGG | 0.113225 | 8.4:-27587535 | None:intergenic |
| ACCAGCTGCTTTATGGATTT+TGG | 0.126630 | 8.4:-27587528 | None:intergenic |
| CTCAATTAACTTTAGAATTC+AGG | 0.135921 | 8.4:+27588076 | MS.gene28548:CDS |
| TCTTGCAATGCTTATAATTT+AGG | 0.174337 | 8.4:-27589486 | None:intergenic |
| AAACTCTTGGACTACCATTT+TGG | 0.192777 | 8.4:+27589299 | MS.gene28548:CDS |
| AATATGGGAAAATCGGTATT+TGG | 0.193531 | 8.4:+27589362 | MS.gene28548:CDS |
| GATGGTTCTGGCTTGCTTAA+TGG | 0.218273 | 8.4:-27588354 | None:intergenic |
| AAAGATAATGTTGTATTTAC+AGG | 0.218715 | 8.4:+27587921 | MS.gene28548:CDS |
| TTTGGTGTCTTTGGACAATA+AGG | 0.243139 | 8.4:+27589317 | MS.gene28548:CDS |
| CCTGATGCTCTCCTTATAAA+TGG | 0.253725 | 8.4:+27587894 | MS.gene28548:CDS |
| TTAGATTTGGCAAGGGTAAA+TGG | 0.263764 | 8.4:+27589014 | MS.gene28548:intron |
| CATAAAGCAGCTGGTGGTTT+TGG | 0.265476 | 8.4:+27587536 | MS.gene28548:CDS |
| GCAGATCGGTTTAACATTCC+TGG | 0.295120 | 8.4:+27588723 | MS.gene28548:CDS |
| TGGAATGATCCTTGAGGATT+TGG | 0.297850 | 8.4:-27588576 | None:intergenic |
| TCTCCATCAGGGGCAGGATA+TGG | 0.306339 | 8.4:-27587596 | None:intergenic |
| TGTGAGAAGCACTTACAATT+TGG | 0.306445 | 8.4:+27589045 | MS.gene28548:CDS |
| ACCGCAACCCTTCGCTATTC+TGG | 0.323813 | 8.4:+27588272 | MS.gene28548:CDS |
| AAGTTAAGATATGCAGTAAA+TGG | 0.334619 | 8.4:+27588663 | MS.gene28548:CDS |
| GGAACTTGAGGTCTGCAATA+TGG | 0.340102 | 8.4:+27589346 | MS.gene28548:CDS |
| CTTATCAATGGACAATTTCC+AGG | 0.341999 | 8.4:+27586789 | MS.gene28548:CDS |
| GGTTCTAGCTTCTATGTAGT+TGG | 0.350729 | 8.4:+27588894 | MS.gene28548:CDS |
| GGCTTGTTGGAGTGCAATTT+CGG | 0.354239 | 8.4:+27586594 | MS.gene28548:CDS |
| TTGTATGTCCAGTTTGAGTT+AGG | 0.364461 | 8.4:-27587458 | None:intergenic |
| TCACCCTGCTTGTTGGTGAT+TGG | 0.369119 | 8.4:+27587621 | MS.gene28548:CDS |
| TAGTGATGGCTTCAATTGTT+GGG | 0.381272 | 8.4:-27586812 | None:intergenic |
| AGCACTTACAATTTGGTTGA+TGG | 0.383823 | 8.4:+27589052 | MS.gene28548:CDS |
| ACAACTTTACCTGATGGTTC+TGG | 0.384775 | 8.4:-27588366 | None:intergenic |
| GTTAGGAGGGATTGGGCAAT+TGG | 0.385290 | 8.4:-27587441 | None:intergenic |
| AAAATGGTAGTCCAAGAGTT+TGG | 0.395215 | 8.4:-27589297 | None:intergenic |
| AAACTTGGCACATCTGTCAT+AGG | 0.395472 | 8.4:+27588798 | MS.gene28548:CDS |
| GTCACACTTGATAAATCAAT+TGG | 0.395490 | 8.4:+27588197 | MS.gene28548:CDS |
| CAATCCCTCCTAACTCAAAC+TGG | 0.397133 | 8.4:+27587450 | MS.gene28548:CDS |
| TATGACAGATGTGCCAAGTT+TGG | 0.397761 | 8.4:-27588796 | None:intergenic |
| TATCAGGGTATTCTTATCAA+TGG | 0.399568 | 8.4:+27586777 | MS.gene28548:intron |
| TGGACAATCTATGACTGTTT+TGG | 0.405611 | 8.4:+27588175 | MS.gene28548:CDS |
| TCAATTAACTTTAGAATTCA+GGG | 0.405724 | 8.4:+27588077 | MS.gene28548:CDS |
| TCAAGCAAATCTGCCAAACT+TGG | 0.412497 | 8.4:+27588783 | MS.gene28548:CDS |
| CAGTTTGAGTTAGGAGGGAT+TGG | 0.419052 | 8.4:-27587449 | None:intergenic |
| AGCAGGGTGAATTCTCCATC+AGG | 0.419826 | 8.4:-27587608 | None:intergenic |
| CCTCAAGGATCATTCCACTA+TGG | 0.422884 | 8.4:+27588582 | MS.gene28548:CDS |
| TTAGTGATGGCTTCAATTGT+TGG | 0.426101 | 8.4:-27586813 | None:intergenic |
| ATATGGGAAAATCGGTATTT+GGG | 0.426388 | 8.4:+27589363 | MS.gene28548:CDS |
| TTCACATGGGAAATTACAAA+TGG | 0.430177 | 8.4:+27586643 | MS.gene28548:CDS |
| TTGAAGCTCATTGAAGTTGA+AGG | 0.435063 | 8.4:+27588107 | MS.gene28548:CDS |
| TTGGCAGATTTGCTTGAAGA+AGG | 0.437466 | 8.4:-27588777 | None:intergenic |
| TGTTGCATCAACTCGTTTCA+CGG | 0.439833 | 8.4:+27588232 | MS.gene28548:CDS |
| TGGGACAAGATTTGTATATG+AGG | 0.443425 | 8.4:+27589382 | MS.gene28548:CDS |
| GACCATTCTACATCAGTAGT+TGG | 0.445874 | 8.4:-27588332 | None:intergenic |
| GCAAGCTTCAATGGTGTGCT+TGG | 0.447834 | 8.4:-27588702 | None:intergenic |
| GTTGCGGTGGTAGTAAGAAT+AGG | 0.448483 | 8.4:-27588257 | None:intergenic |
| AATAGGTGTATCCAAACTCT+TGG | 0.449042 | 8.4:+27589286 | MS.gene28548:intron |
| ACAAACCTTATGGTTGGTCT+TGG | 0.450473 | 8.4:-27587645 | None:intergenic |
| CTGAATTCTAAAGTTAATTG+AGG | 0.451605 | 8.4:-27588075 | None:intergenic |
| TCCTCTTGGTGTTCCTCAAG+AGG | 0.458956 | 8.4:+27586675 | MS.gene28548:CDS |
| GGTCTGCAATATGGGAAAAT+CGG | 0.463418 | 8.4:+27589355 | MS.gene28548:CDS |
| CCATTTATAAGGAGAGCATC+AGG | 0.463434 | 8.4:-27587894 | None:intergenic |
| CCCATGTGAAGAACTGATAT+CGG | 0.464747 | 8.4:-27586630 | None:intergenic |
| AATTCTAAATCCATTGTGAA+TGG | 0.470364 | 8.4:+27588639 | MS.gene28548:CDS |
| AACCGATCTGCAAGCTTCAA+TGG | 0.472339 | 8.4:-27588711 | None:intergenic |
| CAAAATATTTAGATTTGGCA+AGG | 0.472544 | 8.4:+27589006 | MS.gene28548:intron |
| TATGTCCAGTTTGAGTTAGG+AGG | 0.472766 | 8.4:-27587455 | None:intergenic |
| TTGTAAGTGCTTCTCACATC+GGG | 0.473067 | 8.4:-27589040 | None:intergenic |
| GTTCTAGCTTCTATGTAGTT+GGG | 0.475323 | 8.4:+27588895 | MS.gene28548:CDS |
| GAACTTGAGGTCTGCAATAT+GGG | 0.475835 | 8.4:+27589347 | MS.gene28548:CDS |
| TTTATAACAAACCTTATGGT+TGG | 0.483616 | 8.4:-27587651 | None:intergenic |
| ACATCAGTAGTTGGGCCAAC+GGG | 0.483997 | 8.4:-27588323 | None:intergenic |
| TTGGTGTCTTTGGACAATAA+GGG | 0.485305 | 8.4:+27589318 | MS.gene28548:CDS |
| ATGGCTTCAATTGTTGGGCC+TGG | 0.487161 | 8.4:-27586807 | None:intergenic |
| TGGAACCATCCCTGTGTTGA+GGG | 0.487947 | 8.4:+27588602 | MS.gene28548:CDS |
| ATTCCATATCCTGCCCCTGA+TGG | 0.493008 | 8.4:+27587593 | MS.gene28548:CDS |
| GGGACAAGATTTGTATATGA+GGG | 0.494444 | 8.4:+27589383 | MS.gene28548:CDS |
| TGTGTTGAGGGTATTGCAAT+TGG | 0.494537 | 8.4:+27588614 | MS.gene28548:CDS |
| GTTGTATTTACAGGAGAAGC+AGG | 0.494952 | 8.4:+27587930 | MS.gene28548:CDS |
| AGTTCAGAGTGTCCAATGTT+GGG | 0.495076 | 8.4:+27588045 | MS.gene28548:CDS |
| GGAGAATTCACCCTGCTTGT+TGG | 0.496402 | 8.4:+27587614 | MS.gene28548:CDS |
| ATAAGGAGAGCATCAGGAAA+AGG | 0.497992 | 8.4:-27587888 | None:intergenic |
| TTGCGGTGGTAGTAAGAATA+GGG | 0.501194 | 8.4:-27588256 | None:intergenic |
| TGGATCGAATAGTAAGGCCT+CGG | 0.501995 | 8.4:+27588292 | MS.gene28548:CDS |
| TTGGTCCAAGACCAACCATA+AGG | 0.502782 | 8.4:+27587640 | MS.gene28548:CDS |
| ATTGTCCAAAGACACCAAAA+TGG | 0.504017 | 8.4:-27589313 | None:intergenic |
| AGTTTGAGTTAGGAGGGATT+GGG | 0.504184 | 8.4:-27587448 | None:intergenic |
| ATGATAAATTCCTCATTACA+TGG | 0.508993 | 8.4:+27586871 | MS.gene28548:CDS |
| ACCAAAATCCATAAAGCAGC+TGG | 0.511748 | 8.4:+27587527 | MS.gene28548:CDS |
| TCCAGAATAGCGAAGGGTTG+CGG | 0.514051 | 8.4:-27588273 | None:intergenic |
| AATTTAATTTGTAGGTGCTA+AGG | 0.514399 | 8.4:+27587838 | MS.gene28548:intron |
| CCACAAAACAATGCATTCAA+AGG | 0.514474 | 8.4:-27589447 | None:intergenic |
| CTTTGATCTCAATACAATCA+AGG | 0.516426 | 8.4:+27588749 | MS.gene28548:CDS |
| CTAAGGAGACTACTGGATGC+TGG | 0.516845 | 8.4:+27587855 | MS.gene28548:CDS |
| ACCATTCTACATCAGTAGTT+GGG | 0.517141 | 8.4:-27588331 | None:intergenic |
| AACAATGTTGTCATTAGTGA+TGG | 0.521624 | 8.4:-27586826 | None:intergenic |
| TGTGAATGTCATTAACAAGT+TGG | 0.523986 | 8.4:+27586848 | MS.gene28548:CDS |
| TTTCAAGTAAAAGATCAAGT+TGG | 0.525211 | 8.4:+27587482 | MS.gene28548:CDS |
| TTAAGCAAGCCAGAACCATC+AGG | 0.527098 | 8.4:+27588357 | MS.gene28548:CDS |
| TGGACCAATCACCAACAAGC+AGG | 0.529884 | 8.4:-27587625 | None:intergenic |
| CACTATTCAGTCATGGCACA+TGG | 0.531808 | 8.4:+27588869 | MS.gene28548:CDS |
| CACCATTGAAGCTTGCAGAT+CGG | 0.531873 | 8.4:+27588709 | MS.gene28548:CDS |
| TGAGGTTGCCATCCCAACAT+TGG | 0.534570 | 8.4:-27588057 | None:intergenic |
| CAATGCATTCAAAGGAACAT+TGG | 0.536280 | 8.4:-27589439 | None:intergenic |
| CTATTCTGGATCGAATAGTA+AGG | 0.546985 | 8.4:+27588286 | MS.gene28548:CDS |
| ATGTCCAGTTTGAGTTAGGA+GGG | 0.548570 | 8.4:-27587454 | None:intergenic |
| GTAGGTGCTAAGGAGACTAC+TGG | 0.549102 | 8.4:+27587848 | MS.gene28548:intron |
| GTGAATTCTCCATCAGGGGC+AGG | 0.549384 | 8.4:-27587602 | None:intergenic |
| GAGTCACTTGATATTCATGT+TGG | 0.549531 | 8.4:+27588155 | MS.gene28548:CDS |
| TAAAACAAAGAAGGACATCA+TGG | 0.552203 | 8.4:+27587399 | MS.gene28548:CDS |
| AAGTTCAGAGTGTCCAATGT+TGG | 0.553739 | 8.4:+27588044 | MS.gene28548:CDS |
| TTATTTCTGCAAAGTCATGA+AGG | 0.554439 | 8.4:-27588827 | None:intergenic |
| AAGATTTGTATATGAGGGTG+TGG | 0.558013 | 8.4:+27589388 | MS.gene28548:CDS |
| TATTCGATCCAGAATAGCGA+AGG | 0.561121 | 8.4:-27588280 | None:intergenic |
| TTTATTAGGCAAGATGAACC+AGG | 0.562834 | 8.4:+27586540 | None:intergenic |
| AAAATATTTAGATTTGGCAA+GGG | 0.567967 | 8.4:+27589007 | MS.gene28548:intron |
| TACATCAGTAGTTGGGCCAA+CGG | 0.569958 | 8.4:-27588324 | None:intergenic |
| ATGGAACCATCCCTGTGTTG+AGG | 0.571299 | 8.4:+27588601 | MS.gene28548:CDS |
| GCCCAACTACTGATGTAGAA+TGG | 0.574279 | 8.4:+27588330 | MS.gene28548:CDS |
| ATTGTAAGTGCTTCTCACAT+CGG | 0.574512 | 8.4:-27589041 | None:intergenic |
| TCTTAACTTTCCATTCACAA+TGG | 0.577005 | 8.4:-27588649 | None:intergenic |
| AAAAGTAGACCAACCTCTTG+AGG | 0.577118 | 8.4:-27586688 | None:intergenic |
| AGAAGGACATCATGGCAAGA+TGG | 0.577667 | 8.4:+27587407 | MS.gene28548:CDS |
| GTGGATTCAACATTGCTCAA+AGG | 0.578640 | 8.4:+27587558 | MS.gene28548:CDS |
| GTATTGAGATCAAAGATGCC+AGG | 0.578960 | 8.4:-27588741 | None:intergenic |
| AAATTGGAGTCATAATGGCC+TGG | 0.579710 | 8.4:-27586558 | None:intergenic |
| CAGAGTGTCCAATGTTGGGA+TGG | 0.581185 | 8.4:+27588049 | MS.gene28548:CDS |
| GGAGTGGTATAAAACAAAGA+AGG | 0.582772 | 8.4:+27587390 | MS.gene28548:intron |
| GGTTGTTGGGAAATATGTGT+AGG | 0.584632 | 8.4:-27587507 | None:intergenic |
| ACACAGGGATGGTTCCATAG+TGG | 0.584949 | 8.4:-27588596 | None:intergenic |
| GGATCGAATAGTAAGGCCTC+GGG | 0.588596 | 8.4:+27588293 | MS.gene28548:CDS |
| ATAAGGGCATGTGGAACTTG+AGG | 0.589449 | 8.4:+27589334 | MS.gene28548:CDS |
| GCCTCGGGTCTACTACCCGT+TGG | 0.592362 | 8.4:+27588308 | MS.gene28548:CDS |
| TATTACAAGATACACTGCTC+AGG | 0.597676 | 8.4:+27589075 | MS.gene28548:CDS |
| TATTTCTGCAAAGTCATGAA+GGG | 0.601529 | 8.4:-27588826 | None:intergenic |
| ATTCAGTCATGGCACATGGA+TGG | 0.603404 | 8.4:+27588873 | MS.gene28548:CDS |
| ATGAAAACACTATTCAGTCA+TGG | 0.603887 | 8.4:+27588862 | MS.gene28548:CDS |
| ATCAGGGGCAGGATATGGAA+TGG | 0.609375 | 8.4:-27587591 | None:intergenic |
| GCAGGGTGAATTCTCCATCA+GGG | 0.610665 | 8.4:-27587607 | None:intergenic |
| AGATCACTAACCATGTAATG+AGG | 0.615743 | 8.4:-27586881 | None:intergenic |
| CTTTGGACAATAAGGGCATG+TGG | 0.624414 | 8.4:+27589325 | MS.gene28548:CDS |
| AATTGCAATACCCTCAACAC+AGG | 0.626965 | 8.4:-27588612 | None:intergenic |
| ACCTCTTGAGGAACACCAAG+AGG | 0.632840 | 8.4:-27586676 | None:intergenic |
| ACCGATATCAGTTCTTCACA+TGG | 0.635817 | 8.4:+27586629 | MS.gene28548:CDS |
| GGACCAATCACCAACAAGCA+GGG | 0.641501 | 8.4:-27587624 | None:intergenic |
| GCTGCACGACCAAATCCTCA+AGG | 0.649072 | 8.4:+27588567 | MS.gene28548:CDS |
| CAGGGTGAATTCTCCATCAG+GGG | 0.650747 | 8.4:-27587606 | None:intergenic |
| CAATACCCTCAACACAGGGA+TGG | 0.652864 | 8.4:-27588607 | None:intergenic |
| CCATAGTGGAATGATCCTTG+AGG | 0.667915 | 8.4:-27588582 | None:intergenic |
| AGAATAGCGAAGGGTTGCGG+TGG | 0.668220 | 8.4:-27588270 | None:intergenic |
| AAAATCCATAAAGCAGCTGG+TGG | 0.673243 | 8.4:+27587530 | MS.gene28548:CDS |
| CCGATATCAGTTCTTCACAT+GGG | 0.679490 | 8.4:+27586630 | MS.gene28548:CDS |
| ATTGCAATACCCTCAACACA+GGG | 0.682006 | 8.4:-27588611 | None:intergenic |
| ATTCGATCCAGAATAGCGAA+GGG | 0.687447 | 8.4:-27588279 | None:intergenic |
| GCCAACGGGTAGTAGACCCG+AGG | 0.695023 | 8.4:-27588309 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAACCTAATTTAATT+TGG | - | chr8.4:27588001-27588020 | None:intergenic | 15.0% |
| !! | TTAAATATTCTTTACTTTCA+AGG | - | chr8.4:27586946-27586965 | None:intergenic | 15.0% |
| !! | TTAGAAGCAAAAAATTAAAA+AGG | - | chr8.4:27587216-27587235 | None:intergenic | 15.0% |
| !!! | ATTTATTTACTCTTTTATCA+GGG | + | chr8.4:27586762-27586781 | MS.gene28548:intron | 15.0% |
| !!! | GATGTATTTGATTTAAAATT+AGG | - | chr8.4:27588413-27588432 | None:intergenic | 15.0% |
| !!! | TTAAAGATTGTAAATTTTAG+AGG | + | chr8.4:27587183-27587202 | MS.gene28548:intron | 15.0% |
| !!! | TTTTTTTATAACAAACCTTA+TGG | - | chr8.4:27587658-27587677 | None:intergenic | 15.0% |
| !! | AAAATATTTAGATTTGGCAA+GGG | + | chr8.4:27589007-27589026 | MS.gene28548:intron | 20.0% |
| !! | AAAGATAATGTTGTATTTAC+AGG | + | chr8.4:27587921-27587940 | MS.gene28548:CDS | 20.0% |
| !! | CTTTATAGCCAAATTAAATT+AGG | + | chr8.4:27587990-27588009 | MS.gene28548:intron | 20.0% |
| !! | TAAATCAAATACATCAACTT+TGG | + | chr8.4:27588418-27588437 | MS.gene28548:intron | 20.0% |
| !! | TAACGTTTGAAAATTATGAA+CGG | + | chr8.4:27587759-27587778 | MS.gene28548:intron | 20.0% |
| !! | TTTAATAAGTGTCATAAATG+AGG | + | chr8.4:27587088-27587107 | MS.gene28548:intron | 20.0% |
| !! | TTTACTTAACAAACTAATAG+TGG | - | chr8.4:27586910-27586929 | None:intergenic | 20.0% |
| !!! | AATCCAAATTCTCTAAAAAA+TGG | + | chr8.4:27587158-27587177 | MS.gene28548:intron | 20.0% |
| !!! | AATTTTAAGTGTCAAATTGA+CGG | - | chr8.4:27587018-27587037 | None:intergenic | 20.0% |
| !!! | ATCCAAATTCTCTAAAAAAT+GGG | + | chr8.4:27587159-27587178 | MS.gene28548:intron | 20.0% |
| !!! | GATTTATTTACTCTTTTATC+AGG | + | chr8.4:27586761-27586780 | MS.gene28548:intron | 20.0% |
| !!! | TATCTTTTACACCATTTATA+AGG | - | chr8.4:27587908-27587927 | None:intergenic | 20.0% |
| !!! | TCAATTAACTTTAGAATTCA+GGG | + | chr8.4:27588077-27588096 | MS.gene28548:CDS | 20.0% |
| !!! | TTGCCAAATCTAAATATTTT+GGG | - | chr8.4:27589007-27589026 | None:intergenic | 20.0% |
| ! | AAGAAAAATTGGAGTCATAA+TGG | - | chr8.4:27586566-27586585 | None:intergenic | 25.0% |
| ! | AAGTTAAGATATGCAGTAAA+TGG | + | chr8.4:27588663-27588682 | MS.gene28548:CDS | 25.0% |
| ! | AATAAAAAGAGCAGAAAAAC+AGG | - | chr8.4:27587735-27587754 | None:intergenic | 25.0% |
| ! | AATTCTAAATCCATTGTGAA+TGG | + | chr8.4:27588639-27588658 | MS.gene28548:CDS | 25.0% |
| ! | ATAATCCTCTTTAGATTGAT+AGG | + | chr8.4:27589135-27589154 | MS.gene28548:intron | 25.0% |
| ! | ATCTAAACAACATTTGTGTA+TGG | - | chr8.4:27587045-27587064 | None:intergenic | 25.0% |
| ! | ATGATAAATTCCTCATTACA+TGG | + | chr8.4:27586871-27586890 | MS.gene28548:CDS | 25.0% |
| ! | CAAAATATTTAGATTTGGCA+AGG | + | chr8.4:27589006-27589025 | MS.gene28548:intron | 25.0% |
| ! | GAACCCAAAATATTTAGATT+TGG | + | chr8.4:27589001-27589020 | MS.gene28548:intron | 25.0% |
| ! | TGATATTGTAAGATTGAGTT+AGG | + | chr8.4:27587132-27587151 | MS.gene28548:intron | 25.0% |
| ! | TTTATAACAAACCTTATGGT+TGG | - | chr8.4:27587654-27587673 | None:intergenic | 25.0% |
| !! | AAACTATCTTCCTAAAGTTT+TGG | + | chr8.4:27589173-27589192 | MS.gene28548:intron | 25.0% |
| !! | ATTATGACTCCAATTTTTCT+TGG | + | chr8.4:27586565-27586584 | MS.gene28548:CDS | 25.0% |
| !! | CTTGCCAAATCTAAATATTT+TGG | - | chr8.4:27589008-27589027 | None:intergenic | 25.0% |
| !! | GGTTGAAATTGATTTATTTC+AGG | + | chr8.4:27588011-27588030 | MS.gene28548:intron | 25.0% |
| !! | TCCAATTTTTCTTGGAATTT+TGG | + | chr8.4:27586573-27586592 | MS.gene28548:CDS | 25.0% |
| !! | TTTCAAGTAAAAGATCAAGT+TGG | + | chr8.4:27587482-27587501 | MS.gene28548:CDS | 25.0% |
| !!! | AATTTAATTTGTAGGTGCTA+AGG | + | chr8.4:27587838-27587857 | MS.gene28548:intron | 25.0% |
| !!! | AGATGTGCAATTTAATTTGT+AGG | + | chr8.4:27587830-27587849 | MS.gene28548:intron | 25.0% |
| !!! | ATCCCATTTTTTAGAGAATT+TGG | - | chr8.4:27587164-27587183 | None:intergenic | 25.0% |
| !!! | CTCAATTAACTTTAGAATTC+AGG | + | chr8.4:27588076-27588095 | MS.gene28548:CDS | 25.0% |
| !!! | CTGAATTCTAAAGTTAATTG+AGG | - | chr8.4:27588078-27588097 | None:intergenic | 25.0% |
| !!! | TTTTTCGCTAGTATTGATAA+AGG | - | chr8.4:27587697-27587716 | None:intergenic | 25.0% |
| AACAATGTTGTCATTAGTGA+TGG | - | chr8.4:27586829-27586848 | None:intergenic | 30.0% | |
| AATATGGGAAAATCGGTATT+TGG | + | chr8.4:27589362-27589381 | MS.gene28548:CDS | 30.0% | |
| ATAGAAACAACTTTACCTGA+TGG | - | chr8.4:27588375-27588394 | None:intergenic | 30.0% | |
| ATATGGGAAAATCGGTATTT+GGG | + | chr8.4:27589363-27589382 | MS.gene28548:CDS | 30.0% | |
| ATGAAAACACTATTCAGTCA+TGG | + | chr8.4:27588862-27588881 | MS.gene28548:CDS | 30.0% | |
| CTTTGATCTCAATACAATCA+AGG | + | chr8.4:27588749-27588768 | MS.gene28548:CDS | 30.0% | |
| GCAGAAACATTTGATATGTT+GGG | - | chr8.4:27587311-27587330 | None:intergenic | 30.0% | |
| GCCAAAATTCCAAGAAAAAT+TGG | - | chr8.4:27586577-27586596 | None:intergenic | 30.0% | |
| GTCACACTTGATAAATCAAT+TGG | + | chr8.4:27588197-27588216 | MS.gene28548:CDS | 30.0% | |
| TAAAACAAAGAAGGACATCA+TGG | + | chr8.4:27587399-27587418 | MS.gene28548:CDS | 30.0% | |
| TCTTAACTTTCCATTCACAA+TGG | - | chr8.4:27588652-27588671 | None:intergenic | 30.0% | |
| TCTTGCATACATGAACAAAT+AGG | + | chr8.4:27589269-27589288 | MS.gene28548:intron | 30.0% | |
| TGCAGAAACATTTGATATGT+TGG | - | chr8.4:27587312-27587331 | None:intergenic | 30.0% | |
| TGTGAATGTCATTAACAAGT+TGG | + | chr8.4:27586848-27586867 | MS.gene28548:CDS | 30.0% | |
| TGTGTTGTGTAACATAAAAC+AGG | + | chr8.4:27587369-27587388 | MS.gene28548:intron | 30.0% | |
| TTCACATGGGAAATTACAAA+TGG | + | chr8.4:27586643-27586662 | MS.gene28548:CDS | 30.0% | |
| TTTAGATTGATAGGACGATA+TGG | + | chr8.4:27589144-27589163 | MS.gene28548:intron | 30.0% | |
| ! | AATGGAACAATTTTTCCTCT+TGG | + | chr8.4:27586661-27586680 | MS.gene28548:CDS | 30.0% |
| ! | GAATAGTGTTTTCATCATTC+TGG | - | chr8.4:27588857-27588876 | None:intergenic | 30.0% |
| ! | TATCAGGGTATTCTTATCAA+TGG | + | chr8.4:27586777-27586796 | MS.gene28548:intron | 30.0% |
| ! | TATTTCTGCAAAGTCATGAA+GGG | - | chr8.4:27588829-27588848 | None:intergenic | 30.0% |
| !! | AGTATTGATAAAGGAGCTAA+GGG | - | chr8.4:27587688-27587707 | None:intergenic | 30.0% |
| !! | TAGTATTGATAAAGGAGCTA+AGG | - | chr8.4:27587689-27587708 | None:intergenic | 30.0% |
| !! | TGTTTCTATTGCTTTGCTTT+TGG | + | chr8.4:27588386-27588405 | MS.gene28548:intron | 30.0% |
| !! | TTATTTCTGCAAAGTCATGA+AGG | - | chr8.4:27588830-27588849 | None:intergenic | 30.0% |
| !!! | CTTTATGGATTTTGGTTGTT+GGG | - | chr8.4:27587523-27587542 | None:intergenic | 30.0% |
| AAAATGGTAGTCCAAGAGTT+TGG | - | chr8.4:27589300-27589319 | None:intergenic | 35.0% | |
| AAGATTTGTATATGAGGGTG+TGG | + | chr8.4:27589388-27589407 | MS.gene28548:CDS | 35.0% | |
| AATAGGTGTATCCAAACTCT+TGG | + | chr8.4:27589286-27589305 | MS.gene28548:intron | 35.0% | |
| ACCATTCTACATCAGTAGTT+GGG | - | chr8.4:27588334-27588353 | None:intergenic | 35.0% | |
| AGATCACTAACCATGTAATG+AGG | - | chr8.4:27586884-27586903 | None:intergenic | 35.0% | |
| AGCACTTACAATTTGGTTGA+TGG | + | chr8.4:27589052-27589071 | MS.gene28548:CDS | 35.0% | |
| ATCGTCCTATCAATCTAAAG+AGG | - | chr8.4:27589143-27589162 | None:intergenic | 35.0% | |
| ATTGTAAGTGCTTCTCACAT+CGG | - | chr8.4:27589044-27589063 | None:intergenic | 35.0% | |
| ATTGTCCAAAGACACCAAAA+TGG | - | chr8.4:27589316-27589335 | None:intergenic | 35.0% | |
| CAATGCATTCAAAGGAACAT+TGG | - | chr8.4:27589442-27589461 | None:intergenic | 35.0% | |
| CCACAAAACAATGCATTCAA+AGG | - | chr8.4:27589450-27589469 | None:intergenic | 35.0% | |
| CTATTCTGGATCGAATAGTA+AGG | + | chr8.4:27588286-27588305 | MS.gene28548:CDS | 35.0% | |
| CTTATCAATGGACAATTTCC+AGG | + | chr8.4:27586789-27586808 | MS.gene28548:CDS | 35.0% | |
| GAATTGACATTTCAGACAAC+AGG | - | chr8.4:27586717-27586736 | None:intergenic | 35.0% | |
| GAGTCACTTGATATTCATGT+TGG | + | chr8.4:27588155-27588174 | MS.gene28548:CDS | 35.0% | |
| GGAGTGGTATAAAACAAAGA+AGG | + | chr8.4:27587390-27587409 | MS.gene28548:intron | 35.0% | |
| GGGACAAGATTTGTATATGA+GGG | + | chr8.4:27589383-27589402 | MS.gene28548:CDS | 35.0% | |
| TAGTGATGGCTTCAATTGTT+GGG | - | chr8.4:27586815-27586834 | None:intergenic | 35.0% | |
| TATTACAAGATACACTGCTC+AGG | + | chr8.4:27589075-27589094 | MS.gene28548:CDS | 35.0% | |
| TGGGACAAGATTTGTATATG+AGG | + | chr8.4:27589382-27589401 | MS.gene28548:CDS | 35.0% | |
| TGTGTAACATAAAACAGGAG+TGG | + | chr8.4:27587374-27587393 | MS.gene28548:intron | 35.0% | |
| TTAGATTTGGCAAGGGTAAA+TGG | + | chr8.4:27589014-27589033 | MS.gene28548:intron | 35.0% | |
| TTAGTGATGGCTTCAATTGT+TGG | - | chr8.4:27586816-27586835 | None:intergenic | 35.0% | |
| TTGAAGCTCATTGAAGTTGA+AGG | + | chr8.4:27588107-27588126 | MS.gene28548:CDS | 35.0% | |
| ! | AAACTCTTGGACTACCATTT+TGG | + | chr8.4:27589299-27589318 | MS.gene28548:CDS | 35.0% |
| ! | TGGACAATCTATGACTGTTT+TGG | + | chr8.4:27588175-27588194 | MS.gene28548:CDS | 35.0% |
| ! | TTGGTGTCTTTGGACAATAA+GGG | + | chr8.4:27589318-27589337 | MS.gene28548:CDS | 35.0% |
| ! | TTGTATGTCCAGTTTGAGTT+AGG | - | chr8.4:27587461-27587480 | None:intergenic | 35.0% |
| !! | CCTTTGAATGCATTGTTTTG+TGG | + | chr8.4:27589447-27589466 | MS.gene28548:CDS | 35.0% |
| !! | GTTCTAGCTTCTATGTAGTT+GGG | + | chr8.4:27588895-27588914 | MS.gene28548:CDS | 35.0% |
| !! | TGTGAGAAGCACTTACAATT+TGG | + | chr8.4:27589045-27589064 | MS.gene28548:CDS | 35.0% |
| !! | TTTGGTGTCTTTGGACAATA+AGG | + | chr8.4:27589317-27589336 | MS.gene28548:CDS | 35.0% |
| !!! | GCTTTATGGATTTTGGTTGT+TGG | - | chr8.4:27587524-27587543 | None:intergenic | 35.0% |
| !!! | TTCTTGGAATTTTGGCTTGT+TGG | + | chr8.4:27586581-27586600 | MS.gene28548:CDS | 35.0% |
| AAAAGTAGACCAACCTCTTG+AGG | - | chr8.4:27586691-27586710 | None:intergenic | 40.0% | |
| AAAATCCATAAAGCAGCTGG+TGG | + | chr8.4:27587530-27587549 | MS.gene28548:CDS | 40.0% | |
| AAACTTGGCACATCTGTCAT+AGG | + | chr8.4:27588798-27588817 | MS.gene28548:CDS | 40.0% | |
| AAATTGGAGTCATAATGGCC+TGG | - | chr8.4:27586561-27586580 | None:intergenic | 40.0% | |
| AACACTTAGTGCGTGTGAAT+TGG | - | chr8.4:27587255-27587274 | None:intergenic | 40.0% | |
| AATTGCAATACCCTCAACAC+AGG | - | chr8.4:27588615-27588634 | None:intergenic | 40.0% | |
| ACAACTTTACCTGATGGTTC+TGG | - | chr8.4:27588369-27588388 | None:intergenic | 40.0% | |
| ACACTTAGTGCGTGTGAATT+GGG | - | chr8.4:27587254-27587273 | None:intergenic | 40.0% | |
| ACAGGAGAAGCAGGTAAATT+AGG | + | chr8.4:27587939-27587958 | MS.gene28548:intron | 40.0% | |
| ACCAAAATCCATAAAGCAGC+TGG | + | chr8.4:27587527-27587546 | MS.gene28548:CDS | 40.0% | |
| ACCGATATCAGTTCTTCACA+TGG | + | chr8.4:27586629-27586648 | MS.gene28548:CDS | 40.0% | |
| ATTCGATCCAGAATAGCGAA+GGG | - | chr8.4:27588282-27588301 | None:intergenic | 40.0% | |
| ATTGCAATACCCTCAACACA+GGG | - | chr8.4:27588614-27588633 | None:intergenic | 40.0% | |
| CCCATGTGAAGAACTGATAT+CGG | - | chr8.4:27586633-27586652 | None:intergenic | 40.0% | |
| CCGATATCAGTTCTTCACAT+GGG | + | chr8.4:27586630-27586649 | MS.gene28548:CDS | 40.0% | |
| CCTGATGCTCTCCTTATAAA+TGG | + | chr8.4:27587894-27587913 | MS.gene28548:CDS | 40.0% | |
| GAACTTGAGGTCTGCAATAT+GGG | + | chr8.4:27589347-27589366 | MS.gene28548:CDS | 40.0% | |
| GACCATTCTACATCAGTAGT+TGG | - | chr8.4:27588335-27588354 | None:intergenic | 40.0% | |
| GGTCTGCAATATGGGAAAAT+CGG | + | chr8.4:27589355-27589374 | MS.gene28548:CDS | 40.0% | |
| GGTTGTTGGGAAATATGTGT+AGG | - | chr8.4:27587510-27587529 | None:intergenic | 40.0% | |
| GTATTGAGATCAAAGATGCC+AGG | - | chr8.4:27588744-27588763 | None:intergenic | 40.0% | |
| GTGGATTCAACATTGCTCAA+AGG | + | chr8.4:27587558-27587577 | MS.gene28548:CDS | 40.0% | |
| GTTGTATTTACAGGAGAAGC+AGG | + | chr8.4:27587930-27587949 | MS.gene28548:CDS | 40.0% | |
| TATGACAGATGTGCCAAGTT+TGG | - | chr8.4:27588799-27588818 | None:intergenic | 40.0% | |
| TATTCGATCCAGAATAGCGA+AGG | - | chr8.4:27588283-27588302 | None:intergenic | 40.0% | |
| TCAAGCAAATCTGCCAAACT+TGG | + | chr8.4:27588783-27588802 | MS.gene28548:CDS | 40.0% | |
| TCTCGTTGTGCCAAAACTTT+AGG | - | chr8.4:27589186-27589205 | None:intergenic | 40.0% | |
| TGGAATGATCCTTGAGGATT+TGG | - | chr8.4:27588579-27588598 | None:intergenic | 40.0% | |
| TGTTGCATCAACTCGTTTCA+CGG | + | chr8.4:27588232-27588251 | MS.gene28548:CDS | 40.0% | |
| TTGCGGTGGTAGTAAGAATA+GGG | - | chr8.4:27588259-27588278 | None:intergenic | 40.0% | |
| TTGTAAGTGCTTCTCACATC+GGG | - | chr8.4:27589043-27589062 | None:intergenic | 40.0% | |
| ! | AAGTTCAGAGTGTCCAATGT+TGG | + | chr8.4:27588044-27588063 | MS.gene28548:CDS | 40.0% |
| ! | AGTTCAGAGTGTCCAATGTT+GGG | + | chr8.4:27588045-27588064 | MS.gene28548:CDS | 40.0% |
| ! | AGTTTGAGTTAGGAGGGATT+GGG | - | chr8.4:27587451-27587470 | None:intergenic | 40.0% |
| ! | ATGTCCAGTTTGAGTTAGGA+GGG | - | chr8.4:27587457-27587476 | None:intergenic | 40.0% |
| ! | TATGTCCAGTTTGAGTTAGG+AGG | - | chr8.4:27587458-27587477 | None:intergenic | 40.0% |
| ! | TCATGGCAAGATGGAGTTTT+AGG | + | chr8.4:27587416-27587435 | MS.gene28548:CDS | 40.0% |
| ! | TTGGCAGATTTGCTTGAAGA+AGG | - | chr8.4:27588780-27588799 | None:intergenic | 40.0% |
| !! | ACAAACCTTATGGTTGGTCT+TGG | - | chr8.4:27587648-27587667 | None:intergenic | 40.0% |
| !! | ACCAGCTGCTTTATGGATTT+TGG | - | chr8.4:27587531-27587550 | None:intergenic | 40.0% |
| !! | ATAAGGAGAGCATCAGGAAA+AGG | - | chr8.4:27587891-27587910 | None:intergenic | 40.0% |
| !! | CCATTTATAAGGAGAGCATC+AGG | - | chr8.4:27587897-27587916 | None:intergenic | 40.0% |
| !! | GGTTCTAGCTTCTATGTAGT+TGG | + | chr8.4:27588894-27588913 | MS.gene28548:CDS | 40.0% |
| !! | TGTGTTGAGGGTATTGCAAT+TGG | + | chr8.4:27588614-27588633 | MS.gene28548:CDS | 40.0% |
| !!! | GACTACCATTTTGGTGTCTT+TGG | + | chr8.4:27589308-27589327 | MS.gene28548:CDS | 40.0% |
| AACCGATCTGCAAGCTTCAA+TGG | - | chr8.4:27588714-27588733 | None:intergenic | 45.0% | |
| AGAAGGACATCATGGCAAGA+TGG | + | chr8.4:27587407-27587426 | MS.gene28548:CDS | 45.0% | |
| ATTCAGTCATGGCACATGGA+TGG | + | chr8.4:27588873-27588892 | MS.gene28548:CDS | 45.0% | |
| CAATCCCTCCTAACTCAAAC+TGG | + | chr8.4:27587450-27587469 | MS.gene28548:CDS | 45.0% | |
| CACCATTGAAGCTTGCAGAT+CGG | + | chr8.4:27588709-27588728 | MS.gene28548:CDS | 45.0% | |
| CACTATTCAGTCATGGCACA+TGG | + | chr8.4:27588869-27588888 | MS.gene28548:CDS | 45.0% | |
| CACTTAGTGCGTGTGAATTG+GGG | - | chr8.4:27587253-27587272 | None:intergenic | 45.0% | |
| CCTCAAGGATCATTCCACTA+TGG | + | chr8.4:27588582-27588601 | MS.gene28548:CDS | 45.0% | |
| GCCCAACTACTGATGTAGAA+TGG | + | chr8.4:27588330-27588349 | MS.gene28548:CDS | 45.0% | |
| GGAACTTGAGGTCTGCAATA+TGG | + | chr8.4:27589346-27589365 | MS.gene28548:CDS | 45.0% | |
| GTTGCGGTGGTAGTAAGAAT+AGG | - | chr8.4:27588260-27588279 | None:intergenic | 45.0% | |
| TACATCAGTAGTTGGGCCAA+CGG | - | chr8.4:27588327-27588346 | None:intergenic | 45.0% | |
| TGGATCGAATAGTAAGGCCT+CGG | + | chr8.4:27588292-27588311 | MS.gene28548:CDS | 45.0% | |
| TTAAGCAAGCCAGAACCATC+AGG | + | chr8.4:27588357-27588376 | MS.gene28548:CDS | 45.0% | |
| TTGGTCCAAGACCAACCATA+AGG | + | chr8.4:27587640-27587659 | MS.gene28548:CDS | 45.0% | |
| ! | ATAAGGGCATGTGGAACTTG+AGG | + | chr8.4:27589334-27589353 | MS.gene28548:CDS | 45.0% |
| ! | CAAAACCACCAGCTGCTTTA+TGG | - | chr8.4:27587538-27587557 | None:intergenic | 45.0% |
| ! | CAGTTTGAGTTAGGAGGGAT+TGG | - | chr8.4:27587452-27587471 | None:intergenic | 45.0% |
| ! | CATAAAGCAGCTGGTGGTTT+TGG | + | chr8.4:27587536-27587555 | MS.gene28548:CDS | 45.0% |
| ! | CCATAGTGGAATGATCCTTG+AGG | - | chr8.4:27588585-27588604 | None:intergenic | 45.0% |
| ! | CTTTGGACAATAAGGGCATG+TGG | + | chr8.4:27589325-27589344 | MS.gene28548:CDS | 45.0% |
| ! | GCAGATCGGTTTAACATTCC+TGG | + | chr8.4:27588723-27588742 | MS.gene28548:CDS | 45.0% |
| !! | GATGGTTCTGGCTTGCTTAA+TGG | - | chr8.4:27588357-27588376 | None:intergenic | 45.0% |
| !! | GGCTTGTTGGAGTGCAATTT+CGG | + | chr8.4:27586594-27586613 | MS.gene28548:CDS | 45.0% |
| ACACAGGGATGGTTCCATAG+TGG | - | chr8.4:27588599-27588618 | None:intergenic | 50.0% | |
| ACATCAGTAGTTGGGCCAAC+GGG | - | chr8.4:27588326-27588345 | None:intergenic | 50.0% | |
| ACCTCTTGAGGAACACCAAG+AGG | - | chr8.4:27586679-27586698 | None:intergenic | 50.0% | |
| AGCAGGGTGAATTCTCCATC+AGG | - | chr8.4:27587611-27587630 | None:intergenic | 50.0% | |
| AGTGCGTGTGAATTGGGGTT+AGG | - | chr8.4:27587248-27587267 | None:intergenic | 50.0% | |
| ATCAGGGGCAGGATATGGAA+TGG | - | chr8.4:27587594-27587613 | None:intergenic | 50.0% | |
| ATGGAACCATCCCTGTGTTG+AGG | + | chr8.4:27588601-27588620 | MS.gene28548:CDS | 50.0% | |
| ATGGCTTCAATTGTTGGGCC+TGG | - | chr8.4:27586810-27586829 | None:intergenic | 50.0% | |
| ATTCCATATCCTGCCCCTGA+TGG | + | chr8.4:27587593-27587612 | MS.gene28548:CDS | 50.0% | |
| CAATACCCTCAACACAGGGA+TGG | - | chr8.4:27588610-27588629 | None:intergenic | 50.0% | |
| CAGGGTGAATTCTCCATCAG+GGG | - | chr8.4:27587609-27587628 | None:intergenic | 50.0% | |
| CTAAGGAGACTACTGGATGC+TGG | + | chr8.4:27587855-27587874 | MS.gene28548:CDS | 50.0% | |
| GCAAGCTTCAATGGTGTGCT+TGG | - | chr8.4:27588705-27588724 | None:intergenic | 50.0% | |
| GCAGGGTGAATTCTCCATCA+GGG | - | chr8.4:27587610-27587629 | None:intergenic | 50.0% | |
| GGACCAATCACCAACAAGCA+GGG | - | chr8.4:27587627-27587646 | None:intergenic | 50.0% | |
| GGAGAATTCACCCTGCTTGT+TGG | + | chr8.4:27587614-27587633 | MS.gene28548:CDS | 50.0% | |
| GGATCGAATAGTAAGGCCTC+GGG | + | chr8.4:27588293-27588312 | MS.gene28548:CDS | 50.0% | |
| GTAGGTGCTAAGGAGACTAC+TGG | + | chr8.4:27587848-27587867 | MS.gene28548:intron | 50.0% | |
| GTTAGGAGGGATTGGGCAAT+TGG | - | chr8.4:27587444-27587463 | None:intergenic | 50.0% | |
| TCCAGAATAGCGAAGGGTTG+CGG | - | chr8.4:27588276-27588295 | None:intergenic | 50.0% | |
| TGAGGTTGCCATCCCAACAT+TGG | - | chr8.4:27588060-27588079 | None:intergenic | 50.0% | |
| TGGAACCATCCCTGTGTTGA+GGG | + | chr8.4:27588602-27588621 | MS.gene28548:CDS | 50.0% | |
| TGGACCAATCACCAACAAGC+AGG | - | chr8.4:27587628-27587647 | None:intergenic | 50.0% | |
| ! | CAGAGTGTCCAATGTTGGGA+TGG | + | chr8.4:27588049-27588068 | MS.gene28548:CDS | 50.0% |
| !! | CTTGGTGTTCCTCAAGAGGT+TGG | + | chr8.4:27586679-27586698 | MS.gene28548:intron | 50.0% |
| !! | TCACCCTGCTTGTTGGTGAT+TGG | + | chr8.4:27587621-27587640 | MS.gene28548:CDS | 50.0% |
| !! | TCCTCTTGGTGTTCCTCAAG+AGG | + | chr8.4:27586675-27586694 | MS.gene28548:CDS | 50.0% |
| !!! | AAAGCAGCTGGTGGTTTTGG+TGG | + | chr8.4:27587539-27587558 | MS.gene28548:CDS | 50.0% |
| ACCGCAACCCTTCGCTATTC+TGG | + | chr8.4:27588272-27588291 | MS.gene28548:CDS | 55.0% | |
| AGAATAGCGAAGGGTTGCGG+TGG | - | chr8.4:27588273-27588292 | None:intergenic | 55.0% | |
| GCTGCACGACCAAATCCTCA+AGG | + | chr8.4:27588567-27588586 | MS.gene28548:CDS | 55.0% | |
| GTGAATTCTCCATCAGGGGC+AGG | - | chr8.4:27587605-27587624 | None:intergenic | 55.0% | |
| TCTCCATCAGGGGCAGGATA+TGG | - | chr8.4:27587599-27587618 | None:intergenic | 55.0% | |
| GCCAACGGGTAGTAGACCCG+AGG | - | chr8.4:27588312-27588331 | None:intergenic | 65.0% | |
| GCCTCGGGTCTACTACCCGT+TGG | + | chr8.4:27588308-27588327 | MS.gene28548:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 27586553 | 27589497 | 27586553 | ID=MS.gene28548 |
| chr8.4 | mRNA | 27586553 | 27589497 | 27586553 | ID=MS.gene28548.t1;Parent=MS.gene28548 |
| chr8.4 | exon | 27586553 | 27586696 | 27586553 | ID=MS.gene28548.t1.exon1;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27586553 | 27586696 | 27586553 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27586783 | 27586892 | 27586783 | ID=MS.gene28548.t1.exon2;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27586783 | 27586892 | 27586783 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27587391 | 27587661 | 27587391 | ID=MS.gene28548.t1.exon3;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27587391 | 27587661 | 27587391 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27587852 | 27587951 | 27587852 | ID=MS.gene28548.t1.exon4;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27587852 | 27587951 | 27587852 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27588033 | 27588378 | 27588033 | ID=MS.gene28548.t1.exon5;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27588033 | 27588378 | 27588033 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27588548 | 27588916 | 27588548 | ID=MS.gene28548.t1.exon6;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27588548 | 27588916 | 27588548 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27589018 | 27589096 | 27589018 | ID=MS.gene28548.t1.exon7;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27589018 | 27589096 | 27589018 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| chr8.4 | exon | 27589291 | 27589497 | 27589291 | ID=MS.gene28548.t1.exon8;Parent=MS.gene28548.t1 |
| chr8.4 | CDS | 27589291 | 27589497 | 27589291 | ID=cds.MS.gene28548.t1;Parent=MS.gene28548.t1 |
| Gene Sequence |
| Protein sequence |
