AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011879

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011879.t1 MTR_8g479380 97.417 542 12 2 1 542 1 540 0.0 1082
MS.gene011879.t1 MTR_8g479390 65.497 513 175 2 24 536 26 536 0.0 726
MS.gene011879.t1 MTR_5g018270 66.214 515 169 3 22 536 24 533 0.0 706
MS.gene011879.t1 MTR_4g132320 59.475 533 213 2 5 536 7 537 0.0 643
MS.gene011879.t1 MTR_4g049390 57.198 514 217 2 24 536 22 533 0.0 627
MS.gene011879.t1 MTR_4g075690 54.735 528 236 2 10 536 10 535 0.0 624
MS.gene011879.t1 MTR_4g048350 56.420 514 220 3 24 536 22 532 0.0 615
MS.gene011879.t1 MTR_1g026410 56.202 516 223 2 22 536 22 535 0.0 610
MS.gene011879.t1 MTR_3g115050 56.031 514 223 2 24 536 25 536 0.0 609
MS.gene011879.t1 MTR_2g088080 56.031 514 223 2 24 536 25 536 0.0 597
MS.gene011879.t1 MTR_4g083190 50.185 540 261 3 9 541 7 545 0.0 560
MS.gene011879.t1 MTR_3g083440 48.885 538 267 3 11 541 7 543 0.0 541
MS.gene011879.t1 MTR_3g083390 48.699 538 268 3 11 541 7 543 0.0 541
MS.gene011879.t1 MTR_3g083430 48.699 538 268 3 11 541 7 543 0.0 539
MS.gene011879.t1 MTR_4g083210 48.876 534 269 3 11 541 7 539 0.0 538
MS.gene011879.t1 MTR_3g083400 48.699 538 268 3 11 541 7 543 0.0 537
MS.gene011879.t1 MTR_3g083450 49.057 530 262 3 19 541 16 544 0.0 535
MS.gene011879.t1 MTR_4g075690 54.773 440 196 2 10 448 10 447 0.0 518
MS.gene011879.t1 MTR_2g088080 54.267 457 206 2 81 536 1 455 5.85e-177 507
MS.gene011879.t1 MTR_4g101650 48.566 558 260 9 7 541 4 557 6.29e-174 504
MS.gene011879.t1 MTR_3g083410 48.697 499 248 3 50 541 10 507 1.29e-170 493
MS.gene011879.t1 MTR_3g008580 47.170 530 254 7 34 541 34 559 6.59e-166 484
MS.gene011879.t1 MTR_7g051440 46.057 558 266 10 14 541 4 556 1.87e-158 465
MS.gene011879.t1 MTR_1g090707 45.000 500 259 7 50 537 45 540 3.23e-143 426
MS.gene011879.t1 MTR_4g133150 55.825 206 71 3 135 337 23 211 9.39e-66 213
MS.gene011879.t1 MTR_4g015120 27.413 518 342 13 13 499 9 523 5.14e-49 178
MS.gene011879.t1 MTR_5g020600 28.729 543 308 21 9 499 17 532 1.30e-48 177
MS.gene011879.t1 MTR_3g078740 26.497 551 323 15 52 534 49 585 2.99e-48 177
MS.gene011879.t1 MTR_5g081810 29.253 482 299 13 52 499 22 495 6.66e-48 174
MS.gene011879.t1 MTR_5g069680 28.471 569 352 17 1 527 1 556 1.71e-47 174
MS.gene011879.t1 MTR_8g091390 26.502 566 341 15 24 537 29 571 6.30e-47 172
MS.gene011879.t1 MTR_3g078700 26.575 508 328 16 52 534 49 536 1.19e-46 171
MS.gene011879.t1 MTR_5g020620 28.439 538 311 21 9 499 17 527 2.46e-46 171
MS.gene011879.t1 MTR_3g462760 27.007 548 346 16 21 527 20 554 5.34e-43 161
MS.gene011879.t1 MTR_3g078730 26.627 507 329 16 52 534 48 535 4.86e-42 159
MS.gene011879.t1 MTR_3g101640 27.368 570 358 17 9 528 7 570 1.94e-40 154
MS.gene011879.t1 MTR_5g073210 28.113 530 330 17 10 499 8 526 9.30e-40 152
MS.gene011879.t1 MTR_7g065980 27.122 542 342 16 10 506 11 544 9.70e-40 152
MS.gene011879.t1 MTR_8g027375 25.092 546 360 11 29 533 34 571 1.10e-39 152
MS.gene011879.t1 MTR_7g065970 26.642 533 334 16 32 515 28 552 6.74e-38 147
MS.gene011879.t1 MTR_5g083360 27.555 548 319 19 9 499 7 533 3.51e-37 145
MS.gene011879.t1 MTR_2g008330 26.389 504 328 15 50 513 59 559 1.42e-35 140
MS.gene011879.t1 MTR_3g101635 26.834 559 358 18 1 517 1 550 3.36e-35 139
MS.gene011879.t1 MTR_3g071890 27.168 519 327 17 50 525 54 564 2.90e-33 134
MS.gene011879.t1 MTR_7g062250 25.520 529 330 17 22 499 29 544 4.83e-31 127
MS.gene011879.t1 MTR_4g019225 24.719 534 344 14 32 515 29 554 8.27e-31 126
MS.gene011879.t1 MTR_7g058690 24.630 540 351 19 9 499 14 546 1.18e-29 123
MS.gene011879.t1 MTR_7g060460 24.635 548 343 19 9 499 13 547 2.79e-29 122
MS.gene011879.t1 MTR_7g062310 26.157 497 315 16 50 499 68 559 4.91e-29 121
MS.gene011879.t1 MTR_7g458880 24.590 549 346 21 6 499 11 546 5.40e-28 118
MS.gene011879.t1 MTR_4g064530 24.544 493 311 16 50 493 65 545 1.30e-25 111
MS.gene011879.t1 MTR_5g018290 67.742 62 20 0 475 536 5 66 3.46e-25 99.0
MS.gene011879.t1 MTR_4g064530 24.440 491 310 16 50 491 65 543 3.57e-24 106
MS.gene011879.t1 MTR_4g133160 39.623 106 50 2 415 520 1 92 1.38e-20 87.0
MS.gene011879.t1 MTR_5g081790 29.389 262 154 9 254 491 166 420 8.39e-14 73.9
MS.gene011879.t1 MTR_5g081790 29.851 201 121 7 6 192 1 195 4.00e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011879.t1 AT4G37160 68.392 541 166 3 1 538 1 539 0.0 762
MS.gene011879.t1 AT2G23630 65.009 543 186 3 1 542 6 545 0.0 729
MS.gene011879.t1 AT2G23630 65.009 543 186 3 1 542 1 540 0.0 729
MS.gene011879.t1 AT5G66920 60.928 517 199 2 20 536 28 541 0.0 671
MS.gene011879.t1 AT4G37160 68.293 451 138 3 1 448 1 449 0.0 627
MS.gene011879.t1 AT4G22010 56.867 517 221 2 22 537 19 534 0.0 618
MS.gene011879.t1 AT1G76160 54.167 528 237 2 9 536 11 533 0.0 607
MS.gene011879.t1 AT1G41830 53.422 526 242 2 13 537 12 535 0.0 604
MS.gene011879.t1 AT1G21850 53.172 536 246 3 1 536 3 533 0.0 590
MS.gene011879.t1 AT1G21860 53.271 535 240 3 2 536 9 533 0.0 589
MS.gene011879.t1 AT4G38420 53.359 521 236 3 22 536 23 542 0.0 580
MS.gene011879.t1 AT1G55560 49.815 540 261 5 10 540 5 543 0.0 559
MS.gene011879.t1 AT3G13400 49.074 540 265 5 10 540 6 544 0.0 556
MS.gene011879.t1 AT3G13400 49.074 540 265 5 10 540 6 544 0.0 556
MS.gene011879.t1 AT1G55570 49.632 544 262 5 10 542 7 549 0.0 552
MS.gene011879.t1 AT4G28090 50.664 527 256 3 13 536 12 537 0.0 539
MS.gene011879.t1 AT3G13390 49.524 525 256 4 25 541 24 547 0.0 539
MS.gene011879.t1 AT4G12420 49.009 555 251 9 9 541 11 555 0.0 523
MS.gene011879.t1 AT4G12420 49.009 555 251 9 9 541 11 555 0.0 523
MS.gene011879.t1 AT4G38420 52.340 470 216 4 13 475 13 481 5.19e-176 506
MS.gene011879.t1 AT5G48450 48.790 537 258 8 18 541 18 550 9.70e-176 508
MS.gene011879.t1 AT5G48450 48.790 537 258 8 18 541 18 550 1.35e-175 509
MS.gene011879.t1 AT1G75790 46.279 551 265 10 9 537 4 545 4.01e-168 488
MS.gene011879.t1 AT5G51480 47.232 542 258 10 23 541 22 558 2.63e-167 487
MS.gene011879.t1 AT4G25240 48.195 554 259 10 10 541 11 558 7.95e-167 486
MS.gene011879.t1 AT4G25240 48.195 554 259 10 10 541 11 558 7.95e-167 486
MS.gene011879.t1 AT4G38420 52.596 443 202 4 13 448 13 454 1.26e-166 480
MS.gene011879.t1 AT4G39830 26.712 584 358 16 9 537 13 581 9.78e-55 194
MS.gene011879.t1 AT5G21105 27.051 573 326 19 25 539 43 581 7.69e-52 186
MS.gene011879.t1 AT5G21100 27.549 559 325 21 32 534 27 561 5.41e-51 184
MS.gene011879.t1 AT5G21105 27.746 519 297 17 31 491 40 538 3.03e-48 176
MS.gene011879.t1 AT2G38080 26.481 540 360 14 10 517 8 542 5.26e-48 175
MS.gene011879.t1 AT5G58910 28.922 529 323 15 13 499 16 533 5.99e-48 175
MS.gene011879.t1 AT5G58910 29.472 492 296 14 50 499 50 532 6.79e-48 175
MS.gene011879.t1 AT5G03260 29.307 505 310 16 50 517 47 541 7.74e-44 164
MS.gene011879.t1 AT5G58910 28.659 492 293 15 50 499 14 489 7.10e-43 160
MS.gene011879.t1 AT2G46570 27.519 516 313 13 29 497 32 533 9.22e-42 158
MS.gene011879.t1 AT5G01190 26.032 557 353 13 5 517 1 542 1.10e-41 158
MS.gene011879.t1 AT5G05390 26.726 565 366 15 9 533 9 565 7.38e-41 155
MS.gene011879.t1 AT2G30210 27.368 570 357 18 10 533 12 570 1.47e-40 155
MS.gene011879.t1 AT5G01190 27.344 512 313 13 50 517 32 528 2.85e-40 154
MS.gene011879.t1 AT4G39830 25.845 503 293 16 93 537 4 484 1.65e-39 150
MS.gene011879.t1 AT4G39830 25.845 503 293 16 93 537 6 486 1.91e-39 150
MS.gene011879.t1 AT5G09360 26.004 523 348 13 9 499 20 535 2.12e-39 151
MS.gene011879.t1 AT5G01050 25.993 554 342 18 34 535 33 570 7.81e-39 150
MS.gene011879.t1 AT1G18140 26.316 513 312 18 47 502 47 550 1.97e-38 149
MS.gene011879.t1 AT5G01040 26.916 535 314 19 13 493 15 526 1.77e-37 146
MS.gene011879.t1 AT4G39830 24.851 503 285 16 93 537 6 473 1.38e-34 136
MS.gene011879.t1 AT5G48100 25.882 510 333 14 50 518 43 548 1.89e-34 137
MS.gene011879.t1 AT3G09220 25.564 532 331 11 19 499 16 533 7.66e-33 132
MS.gene011879.t1 AT2G46570 27.074 458 273 13 87 497 5 448 1.49e-31 128
MS.gene011879.t1 AT2G40370 24.870 579 374 15 9 533 9 580 3.07e-31 128
MS.gene011879.t1 AT5G21105 26.197 355 222 9 207 539 54 390 9.18e-31 124
MS.gene011879.t1 AT2G29130 25.151 497 317 16 50 499 51 539 6.00e-29 121
MS.gene011879.t1 AT5G07130 30.225 311 196 9 6 299 4 310 7.18e-27 115
MS.gene011879.t1 AT5G60020 24.759 311 212 7 13 309 6 308 4.19e-24 106
MS.gene011879.t1 AT5G60020 24.012 329 228 7 13 327 6 326 4.52e-24 106
MS.gene011879.t1 AT5G60020 24.913 289 198 6 50 327 14 294 1.29e-22 102
MS.gene011879.t1 AT3G09220 24.107 448 276 10 102 499 3 436 1.23e-19 92.4
MS.gene011879.t1 AT5G07130 28.000 225 144 7 92 299 2 225 1.42e-12 70.5
MS.gene011879.t1 AT5G07130 28.000 225 144 7 92 299 2 225 1.42e-12 70.5

Find 147 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACCACCAGCTGCTTTA+TGG 0.113225 8.2:-26583748 None:intergenic
ACCAGCTGCTTTATGGATTT+TGG 0.126630 8.2:-26583741 None:intergenic
TCTTGCAATGCTTATAATTT+AGG 0.172165 8.2:-26585750 None:intergenic
AAACTCTTGGACTACCATTT+TGG 0.192777 8.2:+26585563 MS.gene011879:CDS
AATATGGGAAAATCGGTATT+TGG 0.193531 8.2:+26585626 MS.gene011879:CDS
GATGGTTCTGGCTTGCTTAA+TGG 0.218273 8.2:-26584609 None:intergenic
CAATTGTTGGGCCTGGAAAT+TGG 0.225243 8.2:-26583039 None:intergenic
TTTGGTGTCTTTGGACAATA+AGG 0.243139 8.2:+26585581 MS.gene011879:CDS
CCTGATGCTCTCCTTATAAA+TGG 0.253725 8.2:+26584113 MS.gene011879:CDS
TTAGATTTGGCAAGGGTAAA+TGG 0.263764 8.2:+26585278 MS.gene011879:intron
GCTGATTGGTTTAACATTCC+TGG 0.265378 8.2:+26584984 MS.gene011879:CDS
CATAAAGCAGCTGGTGGTTT+TGG 0.265476 8.2:+26583749 MS.gene011879:CDS
AAAGATAATGCTGTATTTAC+AGG 0.294395 8.2:+26584140 MS.gene011879:CDS
TGGAATGATCCTTGAGGATT+TGG 0.297850 8.2:-26584837 None:intergenic
TCTCCATCAGGGGCAGGATA+TGG 0.306339 8.2:-26583809 None:intergenic
TGTGAGAAGCACTTACAATT+TGG 0.306445 8.2:+26585309 MS.gene011879:CDS
ACCGCAACCCTTCGCTATTC+TGG 0.323813 8.2:+26584527 MS.gene011879:CDS
CTTATCAATGGCCAATTTCC+AGG 0.333618 8.2:+26583028 MS.gene011879:CDS
GGAACTTGAGGTCTGCAATA+TGG 0.340102 8.2:+26585610 MS.gene011879:CDS
GGCTTGTTGGAGTGCAATTT+CGG 0.354239 8.2:+26582836 MS.gene011879:CDS
AAGTTAAGATATGCAGTTAA+TGG 0.360801 8.2:+26584924 MS.gene011879:CDS
TTGTATGTCCAGTTTGAGTT+AGG 0.364461 8.2:-26583671 None:intergenic
TCACCCTGCTTGTTGGTGAT+TGG 0.369119 8.2:+26583834 MS.gene011879:CDS
TAGTGATGGCTTCAATTGTT+GGG 0.381272 8.2:-26583051 None:intergenic
AGCACTTACAATTTGGTTGA+TGG 0.383823 8.2:+26585316 MS.gene011879:CDS
ACAACTTTACCTGATGGTTC+TGG 0.384775 8.2:-26584621 None:intergenic
CACCATTGAAGCTTGCTGAT+TGG 0.385179 8.2:+26584970 MS.gene011879:CDS
GTTAGGAGGGATTGGGCAAT+TGG 0.385290 8.2:-26583654 None:intergenic
TATGACAGATGTGCCTAGTT+TGG 0.387475 8.2:-26585060 None:intergenic
AAAATGGTAGTCCAAGAGTT+TGG 0.395215 8.2:-26585561 None:intergenic
GTCACACTTGATAAATCAAT+TGG 0.395490 8.2:+26584452 MS.gene011879:CDS
CAATCCCTCCTAACTCAAAC+TGG 0.397133 8.2:+26583663 MS.gene011879:CDS
TGGACAATCTATGACTGTTT+TGG 0.405611 8.2:+26584430 MS.gene011879:CDS
TACCAGGGTATTCTTATCAA+TGG 0.406530 8.2:+26583016 MS.gene011879:intron
ACAAACCTTGTGGTTGGTCT+TGG 0.410845 8.2:-26583858 None:intergenic
CAGTTTGAGTTAGGAGGGAT+TGG 0.419052 8.2:-26583662 None:intergenic
AGCAGGGTGAATTCTCCATC+AGG 0.419826 8.2:-26583821 None:intergenic
CCTCAAGGATCATTCCACTA+TGG 0.422884 8.2:+26584843 MS.gene011879:CDS
TTAGTGATGGCTTCAATTGT+TGG 0.426101 8.2:-26583052 None:intergenic
ATATGGGAAAATCGGTATTT+GGG 0.426388 8.2:+26585627 MS.gene011879:CDS
TTCACATGGGAAATTACAAA+TGG 0.430177 8.2:+26582885 MS.gene011879:CDS
GGATCTAGCTTCTATGTAGT+TGG 0.430724 8.2:+26585158 MS.gene011879:CDS
TTGAAGCTCATTGAAGTTGA+AGG 0.435063 8.2:+26584362 MS.gene011879:CDS
CTGAATTCTAAAATTAATTG+AGG 0.441133 8.2:-26584330 None:intergenic
GCAAGCTTCAATGGTGTGCT+TGG 0.442210 8.2:-26584963 None:intergenic
TGGGACAAGATTTGTATATG+AGG 0.443425 8.2:+26585646 MS.gene011879:CDS
GTTGCGGTGGTAGTAAGAAT+AGG 0.448483 8.2:-26584512 None:intergenic
AATAGGTGTATCCAAACTCT+TGG 0.449042 8.2:+26585550 MS.gene011879:intron
TCCTCTTGGTGTTCCTCAAG+AGG 0.458956 8.2:+26582917 MS.gene011879:CDS
GCAGATTTGCTTGAAGAAGA+AGG 0.460172 8.2:-26585038 None:intergenic
GGTCTGCAATATGGGAAAAT+CGG 0.463418 8.2:+26585619 MS.gene011879:CDS
CCATTTATAAGGAGAGCATC+AGG 0.463434 8.2:-26584113 None:intergenic
CCCATGTGAAGAACTGATAT+CGG 0.464747 8.2:-26582872 None:intergenic
AATTCTAAATCCATTGTGAA+TGG 0.470364 8.2:+26584900 MS.gene011879:CDS
GACCATTCTACGTCAGTAGT+TGG 0.471326 8.2:-26584587 None:intergenic
AAACTAGGCACATCTGTCAT+AGG 0.471511 8.2:+26585062 MS.gene011879:CDS
CAAAATATTTAGATTTGGCA+AGG 0.472544 8.2:+26585270 MS.gene011879:intron
TATGTCCAGTTTGAGTTAGG+AGG 0.472766 8.2:-26583668 None:intergenic
TTGTAAGTGCTTCTCACATC+GGG 0.473067 8.2:-26585304 None:intergenic
GAACTTGAGGTCTGCAATAT+GGG 0.475835 8.2:+26585611 MS.gene011879:CDS
AACCAATCAGCAAGCTTCAA+TGG 0.479628 8.2:-26584972 None:intergenic
ACGTCAGTAGTTGGGCCAAC+GGG 0.483997 8.2:-26584578 None:intergenic
TTGGTGTCTTTGGACAATAA+GGG 0.485305 8.2:+26585582 MS.gene011879:CDS
TCAAGCAAATCTGCCAAACT+AGG 0.486368 8.2:+26585047 MS.gene011879:CDS
ATGGCTTCAATTGTTGGGCC+TGG 0.487161 8.2:-26583046 None:intergenic
TGGAACCATCCCTGTGTTGA+GGG 0.487947 8.2:+26584863 MS.gene011879:CDS
ATTCCATATCCTGCCCCTGA+TGG 0.493008 8.2:+26583806 MS.gene011879:CDS
ACCATTCTACGTCAGTAGTT+GGG 0.494365 8.2:-26584586 None:intergenic
GGGACAAGATTTGTATATGA+GGG 0.494444 8.2:+26585647 MS.gene011879:CDS
TGTGTTGAGGGTATTGCAAT+TGG 0.494537 8.2:+26584875 MS.gene011879:CDS
AGTTCAGAGTGTCCAATGTT+GGG 0.495076 8.2:+26584300 MS.gene011879:CDS
GGAGAATTCACCCTGCTTGT+TGG 0.496402 8.2:+26583827 MS.gene011879:CDS
ATAAGGAGAGCATCAGGAAA+AGG 0.497992 8.2:-26584107 None:intergenic
GATCTAGCTTCTATGTAGTT+GGG 0.499919 8.2:+26585159 MS.gene011879:CDS
TTGCGGTGGTAGTAAGAATA+GGG 0.501194 8.2:-26584511 None:intergenic
TGGATCGAATAGTAAGGCCT+CGG 0.501995 8.2:+26584547 MS.gene011879:CDS
ATTGTCCAAAGACACCAAAA+TGG 0.504017 8.2:-26585577 None:intergenic
AGTTTGAGTTAGGAGGGATT+GGG 0.504184 8.2:-26583661 None:intergenic
TTTATTAGGCAAGATGAAGC+AGG 0.504642 8.2:+26582782 None:intergenic
ATGATAAATTCCTCATTACA+TGG 0.508993 8.2:+26583110 MS.gene011879:CDS
ACCAAAATCCATAAAGCAGC+TGG 0.511748 8.2:+26583740 MS.gene011879:CDS
TCCAGAATAGCGAAGGGTTG+CGG 0.514051 8.2:-26584528 None:intergenic
AATTTAATTTGTAGGTGCTA+AGG 0.514399 8.2:+26584057 MS.gene011879:intron
CCACAAAACAATGCATTCAA+AGG 0.514474 8.2:-26585711 None:intergenic
GCTGTATTTACAGGAGAAGC+AGG 0.514793 8.2:+26584149 MS.gene011879:CDS
CTAAGGAGACTACTGGATGC+TGG 0.516845 8.2:+26584074 MS.gene011879:CDS
CTTTGATCTCAACACAATCA+AGG 0.519493 8.2:+26585010 MS.gene011879:CDS
AACAATGTTGTCATTAGTGA+TGG 0.521624 8.2:-26583065 None:intergenic
TGTGAATGTCATTAACAAGT+TGG 0.523986 8.2:+26583087 MS.gene011879:CDS
TTTCAAGTAAAAGATCAAGT+TGG 0.525211 8.2:+26583695 MS.gene011879:CDS
TTAAGCAAGCCAGAACCATC+AGG 0.527098 8.2:+26584612 MS.gene011879:CDS
GCCCAACTACTGACGTAGAA+TGG 0.529154 8.2:+26584585 MS.gene011879:CDS
TGGACCAATCACCAACAAGC+AGG 0.529884 8.2:-26583838 None:intergenic
CACTATTCAGTCATGGCACA+TGG 0.531808 8.2:+26585133 MS.gene011879:CDS
TGAGGTTGCCATCCCAACAT+TGG 0.534570 8.2:-26584312 None:intergenic
CAATGCATTCAAAGGAACAT+TGG 0.536280 8.2:-26585703 None:intergenic
TAAAACAAAGAAGGACATCA+TGG 0.540090 8.2:+26583612 MS.gene011879:CDS
CTATTCTGGATCGAATAGTA+AGG 0.546985 8.2:+26584541 MS.gene011879:CDS
ATGTCCAGTTTGAGTTAGGA+GGG 0.548570 8.2:-26583667 None:intergenic
GTAGGTGCTAAGGAGACTAC+TGG 0.549102 8.2:+26584067 MS.gene011879:intron
GTGAATTCTCCATCAGGGGC+AGG 0.549384 8.2:-26583815 None:intergenic
AAGTTCAGAGTGTCCAATGT+TGG 0.553739 8.2:+26584299 MS.gene011879:CDS
TTATTTCTGCAAAGTCATGA+AGG 0.554439 8.2:-26585091 None:intergenic
AAGATTTGTATATGAGGGTG+TGG 0.558013 8.2:+26585652 MS.gene011879:CDS
TATTCGATCCAGAATAGCGA+AGG 0.561121 8.2:-26584535 None:intergenic
GTGTTGAGATCAAAGATGCC+AGG 0.563439 8.2:-26585002 None:intergenic
GGAGTGGAATAAAACAAAGA+AGG 0.565631 8.2:+26583603 MS.gene011879:intron
ATTCAGTCATGGCACATGGA+TGG 0.566898 8.2:+26585137 MS.gene011879:CDS
AAAATATTTAGATTTGGCAA+GGG 0.567967 8.2:+26585271 MS.gene011879:intron
ACAAGAAACATATGAGTCAC+TGG 0.569367 8.2:+26584397 MS.gene011879:CDS
TACGTCAGTAGTTGGGCCAA+CGG 0.569958 8.2:-26584579 None:intergenic
ATGGAACCATCCCTGTGTTG+AGG 0.571299 8.2:+26584862 MS.gene011879:CDS
ATTCAAAGGAACATTGGTCT+CGG 0.573621 8.2:-26585697 None:intergenic
ATTGTAAGTGCTTCTCACAT+CGG 0.574512 8.2:-26585305 None:intergenic
TCTTAACTTTCCATTCACAA+TGG 0.577005 8.2:-26584910 None:intergenic
AGAAGGACATCATGGCAAGA+TGG 0.577667 8.2:+26583620 MS.gene011879:CDS
GTGGATTCAACATTGCTCAA+AGG 0.578640 8.2:+26583771 MS.gene011879:CDS
CAGAGTGTCCAATGTTGGGA+TGG 0.581185 8.2:+26584304 MS.gene011879:CDS
GGTTGTTGGGAAATATGTGT+AGG 0.584632 8.2:-26583720 None:intergenic
ACACAGGGATGGTTCCATAG+TGG 0.584949 8.2:-26584857 None:intergenic
GGATCGAATAGTAAGGCCTC+GGG 0.588596 8.2:+26584548 MS.gene011879:CDS
ATAAGGGCATGTGGAACTTG+AGG 0.589449 8.2:+26585598 MS.gene011879:CDS
GCCTCGGGTCTACTACCCGT+TGG 0.592362 8.2:+26584563 MS.gene011879:CDS
TATTTCTGCAAAGTCATGAA+GGG 0.601529 8.2:-26585090 None:intergenic
ATGAAAACACTATTCAGTCA+TGG 0.603887 8.2:+26585126 MS.gene011879:CDS
ATCAGGGGCAGGATATGGAA+TGG 0.609375 8.2:-26583804 None:intergenic
GAGTCACTGGATATTCATGT+TGG 0.610302 8.2:+26584410 MS.gene011879:CDS
GCAGGGTGAATTCTCCATCA+GGG 0.610665 8.2:-26583820 None:intergenic
AGATCACTAACCATGTAATG+AGG 0.615743 8.2:-26583120 None:intergenic
CTTTGGACAATAAGGGCATG+TGG 0.624414 8.2:+26585589 MS.gene011879:CDS
AATTGCAATACCCTCAACAC+AGG 0.626965 8.2:-26584873 None:intergenic
ACCTCTTGAGGAACACCAAG+AGG 0.632840 8.2:-26582918 None:intergenic
ACCGATATCAGTTCTTCACA+TGG 0.635817 8.2:+26582871 MS.gene011879:CDS
GGACCAATCACCAACAAGCA+GGG 0.641501 8.2:-26583837 None:intergenic
GCTGCACGACCAAATCCTCA+AGG 0.649072 8.2:+26584828 MS.gene011879:CDS
CAGGGTGAATTCTCCATCAG+GGG 0.650747 8.2:-26583819 None:intergenic
CAATACCCTCAACACAGGGA+TGG 0.652864 8.2:-26584868 None:intergenic
CCATAGTGGAATGATCCTTG+AGG 0.667915 8.2:-26584843 None:intergenic
AGAATAGCGAAGGGTTGCGG+TGG 0.668220 8.2:-26584525 None:intergenic
GGTGGTAGTAAGAATAGGGT+CGG 0.669610 8.2:-26584507 None:intergenic
TATTACAAGATACACTACTC+AGG 0.669965 8.2:+26585339 MS.gene011879:CDS
TTGGTCCAAGACCAACCACA+AGG 0.670544 8.2:+26583853 MS.gene011879:CDS
AAAATCCATAAAGCAGCTGG+TGG 0.673243 8.2:+26583743 MS.gene011879:CDS
CCGATATCAGTTCTTCACAT+GGG 0.679490 8.2:+26582872 MS.gene011879:CDS
ATTGCAATACCCTCAACACA+GGG 0.682006 8.2:-26584872 None:intergenic
ATTCGATCCAGAATAGCGAA+GGG 0.687447 8.2:-26584534 None:intergenic
GCCAACGGGTAGTAGACCCG+AGG 0.695023 8.2:-26584564 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGTTTAAAAATTATGAA+CGG + chr8.2:26583978-26583997 MS.gene011879:intron 10.0%
!! TCATTATCACAAATTAAATT+AGG + chr8.2:26584245-26584264 MS.gene011879:intron 15.0%
!! TTAGAACGAAAAAATTAAAA+AGG - chr8.2:26583422-26583441 None:intergenic 15.0%
!! TTTAATATGTGTTATAAATG+AGG + chr8.2:26583296-26583315 MS.gene011879:intron 15.0%
!!! GATGTATTTGATTTAAAATT+AGG - chr8.2:26584668-26584687 None:intergenic 15.0%
!!! TAATCACATTTTTTAGAATT+TGG - chr8.2:26583372-26583391 None:intergenic 15.0%
!!! TCAATTAATTTTAGAATTCA+GGG + chr8.2:26584332-26584351 MS.gene011879:CDS 15.0%
!!! TCGAGTTATATTTTAAAATT+TGG + chr8.2:26585486-26585505 MS.gene011879:intron 15.0%
!!! TTAAAGATTGTAAATTTTAG+AGG + chr8.2:26583389-26583408 MS.gene011879:intron 15.0%
!!! TTAGATTTTCTTTAATTTCA+AGG - chr8.2:26583184-26583203 None:intergenic 15.0%
!! AAAATATTTAGATTTGGCAA+GGG + chr8.2:26585271-26585290 MS.gene011879:intron 20.0%
!! ATTAAAACTCAAATCTATCA+TGG - chr8.2:26584220-26584239 None:intergenic 20.0%
!! ATTAGTACAATAAAAAGAGT+GGG - chr8.2:26583962-26583981 None:intergenic 20.0%
!! ATTTACTTAACAACTAATAG+TGG - chr8.2:26583149-26583168 None:intergenic 20.0%
!!! ATTTATTTACTCTTTTACCA+GGG + chr8.2:26583001-26583020 MS.gene011879:intron 20.0%
!!! CTCAATTAATTTTAGAATTC+AGG + chr8.2:26584331-26584350 MS.gene011879:CDS 20.0%
!!! CTGAATTCTAAAATTAATTG+AGG - chr8.2:26584333-26584352 None:intergenic 20.0%
!!! TATCTTTTACACCATTTATA+AGG - chr8.2:26584127-26584146 None:intergenic 20.0%
!!! TATTTATTTACTCTTTTACC+AGG + chr8.2:26583000-26583019 MS.gene011879:intron 20.0%
!!! TTGCCAAATCTAAATATTTT+GGG - chr8.2:26585271-26585290 None:intergenic 20.0%
!!! TTTTTTTTTAACAAACCTTG+TGG - chr8.2:26583871-26583890 None:intergenic 20.0%
! AAAATATACTATCCATTCCT+AGG - chr8.2:26584720-26584739 None:intergenic 25.0%
! AAAGATAATGCTGTATTTAC+AGG + chr8.2:26584140-26584159 MS.gene011879:CDS 25.0%
! AAGAAAAATTGGAGTGATAA+TGG - chr8.2:26582808-26582827 None:intergenic 25.0%
! AAGTTAAGATATGCAGTTAA+TGG + chr8.2:26584924-26584943 MS.gene011879:CDS 25.0%
! AATTCTAAATCCATTGTGAA+TGG + chr8.2:26584900-26584919 MS.gene011879:CDS 25.0%
! ACACTTAGTATATGTGAATT+TGG - chr8.2:26583460-26583479 None:intergenic 25.0%
! ATGATAAATTCCTCATTACA+TGG + chr8.2:26583110-26583129 MS.gene011879:CDS 25.0%
! CAAAATATTTAGATTTGGCA+AGG + chr8.2:26585270-26585289 MS.gene011879:intron 25.0%
! CACTTAGTATATGTGAATTT+GGG - chr8.2:26583459-26583478 None:intergenic 25.0%
! CATTAGTACAATAAAAAGAG+TGG - chr8.2:26583963-26583982 None:intergenic 25.0%
! GAACCCAAAATATTTAGATT+TGG + chr8.2:26585265-26585284 MS.gene011879:intron 25.0%
! TGATATTGTAAGATTGAGTT+AGG + chr8.2:26583340-26583359 MS.gene011879:intron 25.0%
!! AAACTATCTTCCTAAAGTTT+TGG + chr8.2:26585437-26585456 MS.gene011879:intron 25.0%
!! ATTATCACTCCAATTTTTCT+TGG + chr8.2:26582807-26582826 MS.gene011879:CDS 25.0%
!! CTTGCCAAATCTAAATATTT+TGG - chr8.2:26585272-26585291 None:intergenic 25.0%
!! TCCAATTTTTCTTGGAATTT+TGG + chr8.2:26582815-26582834 MS.gene011879:CDS 25.0%
!! TTTCAAGTAAAAGATCAAGT+TGG + chr8.2:26583695-26583714 MS.gene011879:CDS 25.0%
!!! AATTTAATTTGTAGGTGCTA+AGG + chr8.2:26584057-26584076 MS.gene011879:intron 25.0%
!!! AGATGTGCAATTTAATTTGT+AGG + chr8.2:26584049-26584068 MS.gene011879:intron 25.0%
!!! GAACAAAAAGATTAGTTTGA+TGG - chr8.2:26583231-26583250 None:intergenic 25.0%
!!! TAGTATTGATAAAGGAGTTA+AGG - chr8.2:26583908-26583927 None:intergenic 25.0%
AACAATGTTGTCATTAGTGA+TGG - chr8.2:26583068-26583087 None:intergenic 30.0%
AATATGGGAAAATCGGTATT+TGG + chr8.2:26585626-26585645 MS.gene011879:CDS 30.0%
ATAGAAACAACTTTACCTGA+TGG - chr8.2:26584630-26584649 None:intergenic 30.0%
ATATGGGAAAATCGGTATTT+GGG + chr8.2:26585627-26585646 MS.gene011879:CDS 30.0%
ATGAAAACACTATTCAGTCA+TGG + chr8.2:26585126-26585145 MS.gene011879:CDS 30.0%
CTCTAAACAACATTTGTGTA+TGG - chr8.2:26583253-26583272 None:intergenic 30.0%
GCCAAAATTCCAAGAAAAAT+TGG - chr8.2:26582819-26582838 None:intergenic 30.0%
GTCACACTTGATAAATCAAT+TGG + chr8.2:26584452-26584471 MS.gene011879:CDS 30.0%
TAAAACAAAGAAGGACATCA+TGG + chr8.2:26583612-26583631 MS.gene011879:CDS 30.0%
TAAAATTAGGTCCAAAAGCA+AGG - chr8.2:26584655-26584674 None:intergenic 30.0%
TAGTATATGTGAATTTGGGT+TGG - chr8.2:26583455-26583474 None:intergenic 30.0%
TATTACAAGATACACTACTC+AGG + chr8.2:26585339-26585358 MS.gene011879:CDS 30.0%
TCTTAACTTTCCATTCACAA+TGG - chr8.2:26584913-26584932 None:intergenic 30.0%
TCTTGCATACATGAACAAAT+AGG + chr8.2:26585533-26585552 MS.gene011879:intron 30.0%
TGTGAATGTCATTAACAAGT+TGG + chr8.2:26583087-26583106 MS.gene011879:CDS 30.0%
TGTGTTGTGTAACATAAAAC+AGG + chr8.2:26583582-26583601 MS.gene011879:intron 30.0%
TTCACATGGGAAATTACAAA+TGG + chr8.2:26582885-26582904 MS.gene011879:CDS 30.0%
! AATGGAACAATTTTTCCTCT+TGG + chr8.2:26582903-26582922 MS.gene011879:CDS 30.0%
! GAATAGTGTTTTCATCATTC+TGG - chr8.2:26585121-26585140 None:intergenic 30.0%
! GGTTGAAATTGACTTATTTC+AGG + chr8.2:26584266-26584285 MS.gene011879:intron 30.0%
! TATTTCTGCAAAGTCATGAA+GGG - chr8.2:26585093-26585112 None:intergenic 30.0%
! TTTAGAATGATAGGACGATA+TGG + chr8.2:26585408-26585427 MS.gene011879:intron 30.0%
! TTTTTAACAAACCTTGTGGT+TGG - chr8.2:26583867-26583886 None:intergenic 30.0%
!! ATAGTCCTCTTTAGAATGAT+AGG + chr8.2:26585399-26585418 MS.gene011879:intron 30.0%
!! TTATTTCTGCAAAGTCATGA+AGG - chr8.2:26585094-26585113 None:intergenic 30.0%
!!! CTTTATGGATTTTGGTTGTT+GGG - chr8.2:26583736-26583755 None:intergenic 30.0%
!!! CTTTTCGCTAGTATTGATAA+AGG - chr8.2:26583916-26583935 None:intergenic 30.0%
AAAAAAAGACCAACCTCTTG+AGG - chr8.2:26582933-26582952 None:intergenic 35.0%
AAAATGGTAGTCCAAGAGTT+TGG - chr8.2:26585564-26585583 None:intergenic 35.0%
AAGATTTGTATATGAGGGTG+TGG + chr8.2:26585652-26585671 MS.gene011879:CDS 35.0%
AATAGGTGTATCCAAACTCT+TGG + chr8.2:26585550-26585569 MS.gene011879:intron 35.0%
ACAAGAAACATATGAGTCAC+TGG + chr8.2:26584397-26584416 MS.gene011879:CDS 35.0%
AGATCACTAACCATGTAATG+AGG - chr8.2:26583123-26583142 None:intergenic 35.0%
AGCACTTACAATTTGGTTGA+TGG + chr8.2:26585316-26585335 MS.gene011879:CDS 35.0%
AGCAGGTAAATTAGGAACAA+TGG + chr8.2:26584166-26584185 MS.gene011879:intron 35.0%
ATTGTAAGTGCTTCTCACAT+CGG - chr8.2:26585308-26585327 None:intergenic 35.0%
ATTGTCCAAAGACACCAAAA+TGG - chr8.2:26585580-26585599 None:intergenic 35.0%
CAATGCATTCAAAGGAACAT+TGG - chr8.2:26585706-26585725 None:intergenic 35.0%
CCACAAAACAATGCATTCAA+AGG - chr8.2:26585714-26585733 None:intergenic 35.0%
CTATTCTGGATCGAATAGTA+AGG + chr8.2:26584541-26584560 MS.gene011879:CDS 35.0%
CTTTGATCTCAACACAATCA+AGG + chr8.2:26585010-26585029 MS.gene011879:CDS 35.0%
GAATTGACATTTCAAACAGC+AGG - chr8.2:26582956-26582975 None:intergenic 35.0%
GGAGTGGAATAAAACAAAGA+AGG + chr8.2:26583603-26583622 MS.gene011879:intron 35.0%
GGGACAAGATTTGTATATGA+GGG + chr8.2:26585647-26585666 MS.gene011879:CDS 35.0%
TAGTGATGGCTTCAATTGTT+GGG - chr8.2:26583054-26583073 None:intergenic 35.0%
TCTCGTTATGCCAAAACTTT+AGG - chr8.2:26585450-26585469 None:intergenic 35.0%
TGGGACAAGATTTGTATATG+AGG + chr8.2:26585646-26585665 MS.gene011879:CDS 35.0%
TGTGTAACATAAAACAGGAG+TGG + chr8.2:26583587-26583606 MS.gene011879:intron 35.0%
TTAGATTTGGCAAGGGTAAA+TGG + chr8.2:26585278-26585297 MS.gene011879:intron 35.0%
TTAGTGATGGCTTCAATTGT+TGG - chr8.2:26583055-26583074 None:intergenic 35.0%
TTGAAGCTCATTGAAGTTGA+AGG + chr8.2:26584362-26584381 MS.gene011879:CDS 35.0%
! AAACTCTTGGACTACCATTT+TGG + chr8.2:26585563-26585582 MS.gene011879:CDS 35.0%
! ATCGTCCTATCATTCTAAAG+AGG - chr8.2:26585407-26585426 None:intergenic 35.0%
! ATTCAAAGGAACATTGGTCT+CGG - chr8.2:26585700-26585719 None:intergenic 35.0%
! CTTTTTCTTATGCCTAGGAA+TGG + chr8.2:26584705-26584724 MS.gene011879:intron 35.0%
! GATCTAGCTTCTATGTAGTT+GGG + chr8.2:26585159-26585178 MS.gene011879:CDS 35.0%
! TACCAGGGTATTCTTATCAA+TGG + chr8.2:26583016-26583035 MS.gene011879:intron 35.0%
! TGGACAATCTATGACTGTTT+TGG + chr8.2:26584430-26584449 MS.gene011879:CDS 35.0%
! TTGGTGTCTTTGGACAATAA+GGG + chr8.2:26585582-26585601 MS.gene011879:CDS 35.0%
! TTGTATGTCCAGTTTGAGTT+AGG - chr8.2:26583674-26583693 None:intergenic 35.0%
!! CCTTTGAATGCATTGTTTTG+TGG + chr8.2:26585711-26585730 MS.gene011879:CDS 35.0%
!! CTCAACTTTTTCTTATGCCT+AGG + chr8.2:26584700-26584719 MS.gene011879:intron 35.0%
!! TGTGAGAAGCACTTACAATT+TGG + chr8.2:26585309-26585328 MS.gene011879:CDS 35.0%
!! TGTTTCTATTGCCTTGCTTT+TGG + chr8.2:26584641-26584660 MS.gene011879:intron 35.0%
!! TTTGGTGTCTTTGGACAATA+AGG + chr8.2:26585581-26585600 MS.gene011879:CDS 35.0%
!!! GCTTTATGGATTTTGGTTGT+TGG - chr8.2:26583737-26583756 None:intergenic 35.0%
!!! TTCTTGGAATTTTGGCTTGT+TGG + chr8.2:26582823-26582842 MS.gene011879:CDS 35.0%
AAAATCCATAAAGCAGCTGG+TGG + chr8.2:26583743-26583762 MS.gene011879:CDS 40.0%
AAACTAGGCACATCTGTCAT+AGG + chr8.2:26585062-26585081 MS.gene011879:CDS 40.0%
AACCAATCAGCAAGCTTCAA+TGG - chr8.2:26584975-26584994 None:intergenic 40.0%
AATTGCAATACCCTCAACAC+AGG - chr8.2:26584876-26584895 None:intergenic 40.0%
ACAACTTTACCTGATGGTTC+TGG - chr8.2:26584624-26584643 None:intergenic 40.0%
ACAGGAGAAGCAGGTAAATT+AGG + chr8.2:26584158-26584177 MS.gene011879:intron 40.0%
ACCAAAATCCATAAAGCAGC+TGG + chr8.2:26583740-26583759 MS.gene011879:CDS 40.0%
ACCATTCTACGTCAGTAGTT+GGG - chr8.2:26584589-26584608 None:intergenic 40.0%
ACCGATATCAGTTCTTCACA+TGG + chr8.2:26582871-26582890 MS.gene011879:CDS 40.0%
ATTCGATCCAGAATAGCGAA+GGG - chr8.2:26584537-26584556 None:intergenic 40.0%
ATTGCAATACCCTCAACACA+GGG - chr8.2:26584875-26584894 None:intergenic 40.0%
CCCATGTGAAGAACTGATAT+CGG - chr8.2:26582875-26582894 None:intergenic 40.0%
CCGATATCAGTTCTTCACAT+GGG + chr8.2:26582872-26582891 MS.gene011879:CDS 40.0%
CCTGATGCTCTCCTTATAAA+TGG + chr8.2:26584113-26584132 MS.gene011879:CDS 40.0%
CTTATCAATGGCCAATTTCC+AGG + chr8.2:26583028-26583047 MS.gene011879:CDS 40.0%
GAACTTGAGGTCTGCAATAT+GGG + chr8.2:26585611-26585630 MS.gene011879:CDS 40.0%
GAGTCACTGGATATTCATGT+TGG + chr8.2:26584410-26584429 MS.gene011879:CDS 40.0%
GGTCTGCAATATGGGAAAAT+CGG + chr8.2:26585619-26585638 MS.gene011879:CDS 40.0%
GGTTGTTGGGAAATATGTGT+AGG - chr8.2:26583723-26583742 None:intergenic 40.0%
GTGGATTCAACATTGCTCAA+AGG + chr8.2:26583771-26583790 MS.gene011879:CDS 40.0%
TATGACAGATGTGCCTAGTT+TGG - chr8.2:26585063-26585082 None:intergenic 40.0%
TATTCGATCCAGAATAGCGA+AGG - chr8.2:26584538-26584557 None:intergenic 40.0%
TCAAGCAAATCTGCCAAACT+AGG + chr8.2:26585047-26585066 MS.gene011879:CDS 40.0%
TGGAATGATCCTTGAGGATT+TGG - chr8.2:26584840-26584859 None:intergenic 40.0%
TTGCGGTGGTAGTAAGAATA+GGG - chr8.2:26584514-26584533 None:intergenic 40.0%
TTGTAAGTGCTTCTCACATC+GGG - chr8.2:26585307-26585326 None:intergenic 40.0%
! AAGTTCAGAGTGTCCAATGT+TGG + chr8.2:26584299-26584318 MS.gene011879:CDS 40.0%
! AGTTCAGAGTGTCCAATGTT+GGG + chr8.2:26584300-26584319 MS.gene011879:CDS 40.0%
! AGTTTGAGTTAGGAGGGATT+GGG - chr8.2:26583664-26583683 None:intergenic 40.0%
! ATGTCCAGTTTGAGTTAGGA+GGG - chr8.2:26583670-26583689 None:intergenic 40.0%
! GCAGATTTGCTTGAAGAAGA+AGG - chr8.2:26585041-26585060 None:intergenic 40.0%
! GGATCTAGCTTCTATGTAGT+TGG + chr8.2:26585158-26585177 MS.gene011879:CDS 40.0%
! TATGTCCAGTTTGAGTTAGG+AGG - chr8.2:26583671-26583690 None:intergenic 40.0%
! TCATGGCAAGATGGAGTTTT+AGG + chr8.2:26583629-26583648 MS.gene011879:CDS 40.0%
!! ACCAGCTGCTTTATGGATTT+TGG - chr8.2:26583744-26583763 None:intergenic 40.0%
!! ATAAGGAGAGCATCAGGAAA+AGG - chr8.2:26584110-26584129 None:intergenic 40.0%
!! CCATTTATAAGGAGAGCATC+AGG - chr8.2:26584116-26584135 None:intergenic 40.0%
!! GCTGATTGGTTTAACATTCC+TGG + chr8.2:26584984-26585003 MS.gene011879:CDS 40.0%
!! TGTGTTGAGGGTATTGCAAT+TGG + chr8.2:26584875-26584894 MS.gene011879:CDS 40.0%
!!! GACTACCATTTTGGTGTCTT+TGG + chr8.2:26585572-26585591 MS.gene011879:CDS 40.0%
AGAAGGACATCATGGCAAGA+TGG + chr8.2:26583620-26583639 MS.gene011879:CDS 45.0%
ATTCAGTCATGGCACATGGA+TGG + chr8.2:26585137-26585156 MS.gene011879:CDS 45.0%
CAATCCCTCCTAACTCAAAC+TGG + chr8.2:26583663-26583682 MS.gene011879:CDS 45.0%
CAATTGTTGGGCCTGGAAAT+TGG - chr8.2:26583042-26583061 None:intergenic 45.0%
CACTATTCAGTCATGGCACA+TGG + chr8.2:26585133-26585152 MS.gene011879:CDS 45.0%
CCTCAAGGATCATTCCACTA+TGG + chr8.2:26584843-26584862 MS.gene011879:CDS 45.0%
GACCATTCTACGTCAGTAGT+TGG - chr8.2:26584590-26584609 None:intergenic 45.0%
GCTGTATTTACAGGAGAAGC+AGG + chr8.2:26584149-26584168 MS.gene011879:CDS 45.0%
GGAACTTGAGGTCTGCAATA+TGG + chr8.2:26585610-26585629 MS.gene011879:CDS 45.0%
GGCCATTGATAAGAATACCC+TGG - chr8.2:26583021-26583040 None:intergenic 45.0%
GGTGGTAGTAAGAATAGGGT+CGG - chr8.2:26584510-26584529 None:intergenic 45.0%
GTGTTGAGATCAAAGATGCC+AGG - chr8.2:26585005-26585024 None:intergenic 45.0%
GTTGCGGTGGTAGTAAGAAT+AGG - chr8.2:26584515-26584534 None:intergenic 45.0%
TGGATCGAATAGTAAGGCCT+CGG + chr8.2:26584547-26584566 MS.gene011879:CDS 45.0%
TTAAGCAAGCCAGAACCATC+AGG + chr8.2:26584612-26584631 MS.gene011879:CDS 45.0%
! ATAAGGGCATGTGGAACTTG+AGG + chr8.2:26585598-26585617 MS.gene011879:CDS 45.0%
! CAAAACCACCAGCTGCTTTA+TGG - chr8.2:26583751-26583770 None:intergenic 45.0%
! CAGTTTGAGTTAGGAGGGAT+TGG - chr8.2:26583665-26583684 None:intergenic 45.0%
! CATAAAGCAGCTGGTGGTTT+TGG + chr8.2:26583749-26583768 MS.gene011879:CDS 45.0%
! CCATAGTGGAATGATCCTTG+AGG - chr8.2:26584846-26584865 None:intergenic 45.0%
! CTTTGGACAATAAGGGCATG+TGG + chr8.2:26585589-26585608 MS.gene011879:CDS 45.0%
!! ACAAACCTTGTGGTTGGTCT+TGG - chr8.2:26583861-26583880 None:intergenic 45.0%
!! CACCATTGAAGCTTGCTGAT+TGG + chr8.2:26584970-26584989 MS.gene011879:CDS 45.0%
!! GATGGTTCTGGCTTGCTTAA+TGG - chr8.2:26584612-26584631 None:intergenic 45.0%
!! GGCTTGTTGGAGTGCAATTT+CGG + chr8.2:26582836-26582855 MS.gene011879:CDS 45.0%
ACACAGGGATGGTTCCATAG+TGG - chr8.2:26584860-26584879 None:intergenic 50.0%
ACCTCTTGAGGAACACCAAG+AGG - chr8.2:26582921-26582940 None:intergenic 50.0%
AGCAGGGTGAATTCTCCATC+AGG - chr8.2:26583824-26583843 None:intergenic 50.0%
ATCAGGGGCAGGATATGGAA+TGG - chr8.2:26583807-26583826 None:intergenic 50.0%
ATGGAACCATCCCTGTGTTG+AGG + chr8.2:26584862-26584881 MS.gene011879:CDS 50.0%
ATGGCTTCAATTGTTGGGCC+TGG - chr8.2:26583049-26583068 None:intergenic 50.0%
ATTCCATATCCTGCCCCTGA+TGG + chr8.2:26583806-26583825 MS.gene011879:CDS 50.0%
CAATACCCTCAACACAGGGA+TGG - chr8.2:26584871-26584890 None:intergenic 50.0%
CAGGGTGAATTCTCCATCAG+GGG - chr8.2:26583822-26583841 None:intergenic 50.0%
CTAAGGAGACTACTGGATGC+TGG + chr8.2:26584074-26584093 MS.gene011879:CDS 50.0%
GCAAGCTTCAATGGTGTGCT+TGG - chr8.2:26584966-26584985 None:intergenic 50.0%
GCAGGGTGAATTCTCCATCA+GGG - chr8.2:26583823-26583842 None:intergenic 50.0%
GCCCAACTACTGACGTAGAA+TGG + chr8.2:26584585-26584604 MS.gene011879:CDS 50.0%
GGACCAATCACCAACAAGCA+GGG - chr8.2:26583840-26583859 None:intergenic 50.0%
GGAGAATTCACCCTGCTTGT+TGG + chr8.2:26583827-26583846 MS.gene011879:CDS 50.0%
GGATCGAATAGTAAGGCCTC+GGG + chr8.2:26584548-26584567 MS.gene011879:CDS 50.0%
GTAGGTGCTAAGGAGACTAC+TGG + chr8.2:26584067-26584086 MS.gene011879:intron 50.0%
GTTAGGAGGGATTGGGCAAT+TGG - chr8.2:26583657-26583676 None:intergenic 50.0%
TACGTCAGTAGTTGGGCCAA+CGG - chr8.2:26584582-26584601 None:intergenic 50.0%
TCCAGAATAGCGAAGGGTTG+CGG - chr8.2:26584531-26584550 None:intergenic 50.0%
TGAGGTTGCCATCCCAACAT+TGG - chr8.2:26584315-26584334 None:intergenic 50.0%
TGGAACCATCCCTGTGTTGA+GGG + chr8.2:26584863-26584882 MS.gene011879:CDS 50.0%
TGGACCAATCACCAACAAGC+AGG - chr8.2:26583841-26583860 None:intergenic 50.0%
TTGGTCCAAGACCAACCACA+AGG + chr8.2:26583853-26583872 MS.gene011879:CDS 50.0%
! CAGAGTGTCCAATGTTGGGA+TGG + chr8.2:26584304-26584323 MS.gene011879:CDS 50.0%
!! CTTGGTGTTCCTCAAGAGGT+TGG + chr8.2:26582921-26582940 MS.gene011879:intron 50.0%
!! TCACCCTGCTTGTTGGTGAT+TGG + chr8.2:26583834-26583853 MS.gene011879:CDS 50.0%
!! TCCTCTTGGTGTTCCTCAAG+AGG + chr8.2:26582917-26582936 MS.gene011879:CDS 50.0%
!!! AAAGCAGCTGGTGGTTTTGG+TGG + chr8.2:26583752-26583771 MS.gene011879:CDS 50.0%
ACCGCAACCCTTCGCTATTC+TGG + chr8.2:26584527-26584546 MS.gene011879:CDS 55.0%
ACGTCAGTAGTTGGGCCAAC+GGG - chr8.2:26584581-26584600 None:intergenic 55.0%
AGAATAGCGAAGGGTTGCGG+TGG - chr8.2:26584528-26584547 None:intergenic 55.0%
GCTGCACGACCAAATCCTCA+AGG + chr8.2:26584828-26584847 MS.gene011879:CDS 55.0%
GTGAATTCTCCATCAGGGGC+AGG - chr8.2:26583818-26583837 None:intergenic 55.0%
TCTCCATCAGGGGCAGGATA+TGG - chr8.2:26583812-26583831 None:intergenic 55.0%
GCCAACGGGTAGTAGACCCG+AGG - chr8.2:26584567-26584586 None:intergenic 65.0%
GCCTCGGGTCTACTACCCGT+TGG + chr8.2:26584563-26584582 MS.gene011879:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 26582795 26585761 26582795 ID=MS.gene011879
chr8.2 mRNA 26582795 26585761 26582795 ID=MS.gene011879.t1;Parent=MS.gene011879
chr8.2 exon 26582795 26582938 26582795 ID=MS.gene011879.t1.exon1;Parent=MS.gene011879.t1
chr8.2 CDS 26582795 26582938 26582795 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26583022 26583131 26583022 ID=MS.gene011879.t1.exon2;Parent=MS.gene011879.t1
chr8.2 CDS 26583022 26583131 26583022 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26583604 26583874 26583604 ID=MS.gene011879.t1.exon3;Parent=MS.gene011879.t1
chr8.2 CDS 26583604 26583874 26583604 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26584071 26584170 26584071 ID=MS.gene011879.t1.exon4;Parent=MS.gene011879.t1
chr8.2 CDS 26584071 26584170 26584071 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26584288 26584633 26584288 ID=MS.gene011879.t1.exon5;Parent=MS.gene011879.t1
chr8.2 CDS 26584288 26584633 26584288 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26584809 26585180 26584809 ID=MS.gene011879.t1.exon6;Parent=MS.gene011879.t1
chr8.2 CDS 26584809 26585180 26584809 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26585282 26585360 26585282 ID=MS.gene011879.t1.exon7;Parent=MS.gene011879.t1
chr8.2 CDS 26585282 26585360 26585282 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
chr8.2 exon 26585555 26585761 26585555 ID=MS.gene011879.t1.exon8;Parent=MS.gene011879.t1
chr8.2 CDS 26585555 26585761 26585555 ID=cds.MS.gene011879.t1;Parent=MS.gene011879.t1
Gene Sequence

>MS.gene011879

ATGAAGCAGGCCATTATCACTCCAATTTTTCTTGGAATTTTGGCTTGTTGGAGTGCAATTTCGGTTATTGCAGAAGACCGATATCAGTTCTTCACATGGGAAATTACAAATGGAACAATTTTTCCTCTTGGTGTTCCTCAAGAGGTTGGTCTTTTTTTCCTGCTGTTTGAAATGTCAATTCTTTCACATTTGAAATAATTAGTGATATTTATTTACTCTTTTACCAGGGTATTCTTATCAATGGCCAATTTCCAGGCCCAACAATTGAAGCCATCACTAATGACAACATTGTTGTGAATGTCATTAACAAGTTGGATGATAAATTCCTCATTACATGGTTAGTGATCTGATCCACTATTAGTTGTTAAGTAAATCACTAATTCAAACCTTGAAATTAAAGAAAATCTAAAATATTTTCTAAAATTAAAATTTTCCATCAAACTAATCTTTTTGTTCCATACACAAATGTTGTTTAGAGTCTCATATATGATGAGATAAAGTTTTAATATGTGTTATAAATGAGGACATTTCTCGACTTTTAAAGTTGATATTGTAAGATTGAGTTAGGTCTAATCCAAATTCTAAAAAATGTGATTAAAGATTGTAAATTTTAGAGGCATATAACCTTTTTAATTTTTTCGTTCTAATGAGTTAAAACCAACCCAAATTCACATATACTAAGTGTTGAGAGTTGAGACGTGAGAAGTTGCATATTCGAATTTACATCTCAACATATCAAATGTCTCTGCAACATTTTACTGCGTGAATCGTGCATTAATTAATTATTTGTGTTGTGTAACATAAAACAGGAGTGGAATAAAACAAAGAAGGACATCATGGCAAGATGGAGTTTTAGGAACCAATTGCCCAATCCCTCCTAACTCAAACTGGACATACAAATTTCAAGTAAAAGATCAAGTTGGAACCTACACATATTTCCCAACAACCAAAATCCATAAAGCAGCTGGTGGTTTTGGTGGATTCAACATTGCTCAAAGGTCAACTATAGCCATTCCATATCCTGCCCCTGATGGAGAATTCACCCTGCTTGTTGGTGATTGGTCCAAGACCAACCACAAGGTTTGTTAAAAAAAAAAATAAAAATCACTTCCTTAACTCCTTTATCAATACTAGCGAAAAGACGCGCACTCACGTGTCTGTCTACCCACTCTTTTTATTGTACTAATGTTTAAAAATTATGAACGGTGTTTTTTCTATGAAATTTTGATTTTAATCAGAAACATTTGATCACTAAGATGTGCAATTTAATTTGTAGGTGCTAAGGAGACTACTGGATGCTGGAAAGAGTCTTCCTTTTCCTGATGCTCTCCTTATAAATGGTGTAAAAGATAATGCTGTATTTACAGGAGAAGCAGGTAAATTAGGAACAATGGTGTAATAACTTTAATTAAAACTTTATAGCCATGATAGATTTGAGTTTTAATTGAAATCATTATCACAAATTAAATTAGGTTGAAATTGACTTATTTCAGGAAAGACATACAAGTTCAGAGTGTCCAATGTTGGGATGGCAACCTCAATTAATTTTAGAATTCAGGGTCATTCATTGAAGCTCATTGAAGTTGAAGGTGCTCACACATTACAAGAAACATATGAGTCACTGGATATTCATGTTGGACAATCTATGACTGTTTTGGTCACACTTGATAAATCAATTGGTGACTATTACATTATTGCATCAACTCGTTTCACCGACCCTATTCTTACTACCACCGCAACCCTTCGCTATTCTGGATCGAATAGTAAGGCCTCGGGTCTACTACCCGTTGGCCCAACTACTGACGTAGAATGGTCCATTAAGCAAGCCAGAACCATCAGGTAAAGTTGTTTCTATTGCCTTGCTTTTGGACCTAATTTTAAATCAAATACATCAATTTTTGTTGACTCAACTTTTTCTTATGCCTAGGAATGGATAGTATATTTTAAACATGTTTTCAATTACGAATCTTATAAATTTTTAGTCATTAACTTTTGACTTTTTTTCTTTTCAAAGATTGAACTTAACAGCAAATGCTGCACGACCAAATCCTCAAGGATCATTCCACTATGGAACCATCCCTGTGTTGAGGGTATTGCAATTGGCAAATTCTAAATCCATTGTGAATGGAAAGTTAAGATATGCAGTTAATGGAATTTCACACATCAATCCAAGCACACCATTGAAGCTTGCTGATTGGTTTAACATTCCTGGCATCTTTGATCTCAACACAATCAAGGACTTTCCTTCTTCTTCAAGCAAATCTGCCAAACTAGGCACATCTGTCATAGGTTTCACCCTTCATGACTTTGCAGAAATAATATTCCAGAATGATGAAAACACTATTCAGTCATGGCACATGGATGGATCTAGCTTCTATGTAGTTGGGTAAGACAACTAAATTTTTTCATATTTAGTTTAACTTAATTAAATTTATCAATAAAATAATTACTTAATAATCTTATGTTGATTGAACCCAAAATATTTAGATTTGGCAAGGGTAAATGGACACCCGATGTGAGAAGCACTTACAATTTGGTTGATGGTATTACAAGATACACTACTCAGGTCAGTCGATTTTTTTGTCGCTAATTCAACTTTTTCTAATAGTCCTCTTTAGAATGATAGGACGATATGGACGACAAAACTATCTTCCTAAAGTTTTGGCATAACGAGATTATTAAAATATTATTTCGAGTTATATTTTAAAATTTGGTTACATTTGATTGATAAGAATTTCTCTTGCATACATGAACAAATAGGTGTATCCAAACTCTTGGACTACCATTTTGGTGTCTTTGGACAATAAGGGCATGTGGAACTTGAGGTCTGCAATATGGGAAAATCGGTATTTGGGACAAGATTTGTATATGAGGGTGTGGAACAATGAGCAAAGCTTATACACCGAGACCAATGTTCCTTTGAATGCATTGTTTTGTGGCAAAGCAAAACACTTGCCTAAATTATAA
Protein sequence

>MS.gene011879.t1

MKQAIITPIFLGILACWSAISVIAEDRYQFFTWEITNGTIFPLGVPQEGILINGQFPGPTIEAITNDNIVVNVINKLDDKFLITWSGIKQRRTSWQDGVLGTNCPIPPNSNWTYKFQVKDQVGTYTYFPTTKIHKAAGGFGGFNIAQRSTIAIPYPAPDGEFTLLVGDWSKTNHKVLRRLLDAGKSLPFPDALLINGVKDNAVFTGEAGKTYKFRVSNVGMATSINFRIQGHSLKLIEVEGAHTLQETYESLDIHVGQSMTVLVTLDKSIGDYYIIASTRFTDPILTTTATLRYSGSNSKASGLLPVGPTTDVEWSIKQARTIRLNLTANAARPNPQGSFHYGTIPVLRVLQLANSKSIVNGKLRYAVNGISHINPSTPLKLADWFNIPGIFDLNTIKDFPSSSSKSAKLGTSVIGFTLHDFAEIIFQNDENTIQSWHMDGSSFYVVGFGKGKWTPDVRSTYNLVDGITRYTTQVYPNSWTTILVSLDNKGMWNLRSAIWENRYLGQDLYMRVWNNEQSLYTETNVPLNALFCGKAKHLPKL